Miyakogusa Predicted Gene
- Lj4g3v2000910.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2000910.1 Non Chatacterized Hit- tr|I1MT07|I1MT07_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,82.17,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_3,Pentatricopeptide repeat; DYW_de,CUFF.50074.1
(775 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 1054 0.0
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 586 e-167
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 569 e-162
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 540 e-153
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 536 e-152
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 535 e-152
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 533 e-151
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 529 e-150
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 528 e-150
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 518 e-147
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 514 e-146
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 509 e-144
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 508 e-144
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 504 e-142
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 500 e-141
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 490 e-138
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 481 e-136
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 478 e-135
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 475 e-134
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 473 e-133
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 467 e-131
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 466 e-131
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 461 e-130
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 459 e-129
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-128
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 457 e-128
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 455 e-128
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 454 e-128
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 454 e-127
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 453 e-127
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 452 e-127
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 452 e-127
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 451 e-127
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 450 e-126
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 448 e-126
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 447 e-126
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 447 e-125
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 447 e-125
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 447 e-125
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 446 e-125
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 441 e-124
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 441 e-124
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 441 e-124
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 441 e-123
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 441 e-123
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 439 e-123
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 433 e-121
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-120
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 425 e-119
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 425 e-119
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 423 e-118
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 417 e-116
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 410 e-114
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 406 e-113
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-112
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 404 e-112
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-112
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-112
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 400 e-111
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-110
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 397 e-110
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 396 e-110
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 394 e-110
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-109
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-108
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 384 e-106
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 378 e-104
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 371 e-103
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-102
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 369 e-102
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 360 2e-99
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 1e-98
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 2e-98
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 7e-98
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 354 2e-97
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 352 4e-97
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 2e-96
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 6e-96
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 348 1e-95
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 5e-95
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 6e-95
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 5e-93
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 339 5e-93
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 1e-91
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 2e-91
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 5e-91
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 7e-91
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 329 4e-90
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 7e-90
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 3e-89
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 9e-89
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 1e-88
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 323 3e-88
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 4e-88
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 323 4e-88
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 321 1e-87
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 1e-86
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 317 2e-86
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 308 6e-84
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 1e-83
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 1e-83
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 2e-83
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 306 4e-83
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 5e-83
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 303 3e-82
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 8e-82
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 1e-80
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 4e-80
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 295 6e-80
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 1e-79
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 293 2e-79
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 4e-79
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 290 2e-78
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 8e-78
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 287 2e-77
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 286 3e-77
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 286 5e-77
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 5e-77
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 1e-76
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 3e-75
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 4e-75
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 2e-74
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 5e-74
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 5e-74
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 1e-73
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 6e-73
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 2e-71
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 8e-70
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 3e-68
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 6e-66
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 1e-65
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 5e-64
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 3e-63
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 5e-61
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 8e-60
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 1e-58
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 3e-58
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 1e-53
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 207 2e-53
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 8e-27
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 114 4e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 6e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 6e-25
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 6e-25
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 8e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 2e-23
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 107 3e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 7e-23
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 8e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-22
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 3e-22
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 3e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 100 3e-21
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 6e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 96 7e-20
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-19
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 95 2e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 94 4e-19
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 93 6e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 8e-19
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 8e-19
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 8e-19
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 7e-18
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 7e-18
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 87 4e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 7e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 86 1e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 86 1e-16
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 2e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 85 2e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 85 2e-16
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 83 8e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 83 8e-16
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 78 3e-14
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 7e-14
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-13
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-13
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 6e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 6e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 72 1e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 71 2e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 4e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 5e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 66 1e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 3e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 1e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 58 2e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 57 3e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 5e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 8e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 3e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 53 7e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 53 1e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 3e-06
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 51 3e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 1054 bits (2726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/779 (63%), Positives = 624/779 (80%), Gaps = 7/779 (0%)
Query: 1 MIQRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFF 60
+I +N+ + F ++ ++ HLAQ HAQ+IL+G+++D++ +TKLTQ+L D GA +AR +F
Sbjct: 17 LISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFL 76
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDK 117
SV+ PD+FLFNVL++GFSVN SP SS++++ HLR T+L P++ TYAF I+A+ DD+
Sbjct: 77 SVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDR 136
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
G ++H A+VDG S L + S++V +YFKF RV ARKVFD MPE+DT+ WNT+I+G
Sbjct: 137 AGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYR 196
Query: 178 RNCYYDDSIQVFRDMVANG-VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+N Y +SIQVFRD++ ++D+TT++ +LPAVAELQEL +GM I LA K G +
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
YVLTG +SLYSKCG I LF KPD++AYNAMI GYT NGE E S+ LF+EL++S
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
G R+ SST+V L+PVS GHL L +I GYC+KS +S++SVSTALTT+YS+LNEI+ A
Sbjct: 317 GARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
RKLFDESPEK++ +WNAMISGYTQNGLTE A+SLF+EM +EF+PNPVTIT LSACAQL
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTII 476
G+LS GKWVH L++S + E +IYVSTALI MYAKCG+I+EAR+LFD M++KN VTWNT+I
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMI 493
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
GYGLHG G EAL +F EML+SGI P+ VTFL +LYACSHAGLV+EG+EIF+ M+++Y
Sbjct: 494 SGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGF 553
Query: 537 EPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASE 596
EP +H+ACMVDILGRAG L++AL+FI M +EPG +VW TLLGAC+IHK+T++AR SE
Sbjct: 554 EPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSE 613
Query: 597 RLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFV 656
+LFELDP +VGY+VLLSNI+S RN+P+AA++R+ AKKRKLAK PG TLIEI T HVF
Sbjct: 614 KLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFT 673
Query: 657 SGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFA 716
SGD+SH IY LEKL GKMRE GYQ ET +LHDVEEEE+ELMV VHSE+LAIAF
Sbjct: 674 SGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFG 733
Query: 717 LITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
LI TEPGTEIRIIKNLRVCLDCHT TK ISKITERVIVVRDANRFHHFKDG+CSCGDYW
Sbjct: 734 LIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 586 bits (1510), Expect = e-167, Method: Compositional matrix adjust.
Identities = 300/769 (39%), Positives = 455/769 (59%), Gaps = 5/769 (0%)
Query: 10 FINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFL 69
+ + +L L QI + NG + TKL +G+ A +F + + L
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 70 FNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLLHAHA 126
++ ++KGF+ + ++ + +R ++ P Y + + + D+ + G +H
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRY-DDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSI 186
+ GF +LF + L ++Y K +V ARKVFD MPERD V+WNT++ G +N ++
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 187 QVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLY 246
++ + M ++ T+V+VLPAV+ L+ + VG I A + GF + T LV +Y
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 247 SKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMV 306
+KCG + TAR LF + + +++++N+MI Y N + ++ +F+++L G + + +++
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 341
Query: 307 GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK 366
G + + G L I V+ G N SV +L ++Y + E+D A +F + +
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH 426
T+ +WNAMI G+ QNG AL+ F +M + P+ T + ++A A+L KW+H
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 427 QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGH 486
++ L+ N++V+TAL+DMYAKCG I AR +FD MSE++ TWN +I GYG HG+G
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 487 EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACM 546
AL+LF+EM I P+GVTFLS++ ACSH+GLV G + F+ M Y IE +H+ M
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 547 VDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSV 606
VD+LGRAG+L +A +FI MPV+P V+G +LGAC+IHKN + A A+ERLFEL+P
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 607 GYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHAT 666
GY+VLL+NIY + K +R ++ L KTPGC+++EI H F SG +H +
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 701
Query: 667 AIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEI 726
IYA LEKL ++E GY +T L VE + KE +++ HSEKLAI+F L+ T GT I
Sbjct: 702 KIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTI 760
Query: 727 RIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+ KNLRVC DCH ATK+IS +T R IVVRD RFHHFK+G CSCGDYW
Sbjct: 761 HVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 569 bits (1467), Expect = e-162, Method: Compositional matrix adjust.
Identities = 292/774 (37%), Positives = 458/774 (59%), Gaps = 8/774 (1%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
+ + T NL +HA+L+++ ++ KL G AR F ++N
Sbjct: 55 DDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQN 114
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHA 124
D++ +N+++ G+ + S I ++ L + L PD T+ + A G +H
Sbjct: 115 RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHC 174
Query: 125 HAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDD 184
A+ GF +++V +SL+ LY ++ VG AR +FDEMP RD +WN +I+G ++ +
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 185 SIQVFRDMVANGVQ-VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLV 243
++ + +NG++ +DS TVV++L A E + G+ I + K G + +V L+
Sbjct: 235 ALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 244 SLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSS 303
LY++ G + + +F + DLI++N++I Y N + ++ LF+E+ +S +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 304 TMVGLIPVSSPFGHLHLTCSIQGYCVKSGA-ISNSSVSTALTTIYSRLNEIDMARKLFDE 362
T++ L + S G + S+QG+ ++ G + + ++ A+ +Y++L +D AR +F+
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 363 SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT-EFTPNPVTITTTLSACAQLGSLSF 421
P V +WN +ISGY QNG A+ ++ M E N T + L AC+Q G+L
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
G +H + L +++V T+L DMY KCG + +A LF + N+V WNT+I +G
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAE 541
HG+G +A+ LFKEML G+ P +TF+++L ACSH+GLV EG+ F M Y I P +
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 542 HHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFEL 601
H+ CMVD+ GRAGQLE AL+FI++M ++P ++WG LL AC++H N D+ ++ASE LFE+
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 602 DPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRS 661
+P VGY+VLLSN+Y+ + IR +A + L KTPG + +E++ VF +G+++
Sbjct: 650 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 709
Query: 662 HSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTE 721
H +Y L L K++ IGY + L DVE++EKE ++ HSE+LAIAFALI T
Sbjct: 710 HPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATP 769
Query: 722 PGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
T IRI KNLRVC DCH+ TKFISKITER I+VRD+NRFHHFK+G+CSCGDYW
Sbjct: 770 AKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 540 bits (1390), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/697 (37%), Positives = 421/697 (60%), Gaps = 8/697 (1%)
Query: 81 ASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSS 140
AS +S LYT+ + + D++ YA I ++ +HA +V G + F+ +
Sbjct: 4 ASCLASPLLYTN----SGIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITK 58
Query: 141 LVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVD 200
L+ F + AR+VFD++P WN +I G RN ++ D++ ++ +M V D
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 201 STTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFG 260
S T +L A + L L +G + F+ GF D +V GL++LY+KC + +AR +F
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 261 MIGKPD--LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHL 318
+ P+ ++++ A++S Y NGE ++++F ++ + +V ++ + L
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 319 HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGY 378
SI VK G + +L T+Y++ ++ A+ LFD+ + WNAMISGY
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
+NG A+ +F EM+ + P+ ++IT+ +SACAQ+GSL + +++ + + ++
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV 358
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS 498
++S+ALIDM+AKCG++ AR +FD +++ V W+ +I GYGLHG EA+ L++ M
Sbjct: 359 FISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG 418
Query: 499 GIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEK 558
G+HP+ VTFL +L AC+H+G+VREG F+ M + ++I P +H+AC++D+LGRAG L++
Sbjct: 419 GVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 559 ALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSV 618
A E I+ MPV+PG VWG LL ACK H++ ++ A+++LF +DP + G+YV LSN+Y+
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAA 537
Query: 619 GRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGK 678
R + + A +R K++ L K GC+ +E+ G F GD+SH I +E + +
Sbjct: 538 ARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESR 597
Query: 679 MREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDC 738
++E G+ SLHD+ +EE E + HSE++AIA+ LI+T GT +RI KNLR C++C
Sbjct: 598 LKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNC 657
Query: 739 HTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
H ATK ISK+ +R IVVRD NRFHHFKDG+CSCGDYW
Sbjct: 658 HAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 244/474 (51%), Gaps = 7/474 (1%)
Query: 9 TFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIF 68
+ I+ A + L QIHA+L++ G Q ITKL FG AR +F + P IF
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 85
Query: 69 LFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLLHAH 125
+N +++G+S N ++ +Y++++L ++PD++T+ + A + G +HA
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 126 AIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFD--EMPERDTVAWNTVITGLVRNCYYD 183
GF +++FV + L+ LY K R+G AR VF+ +PER V+W +++ +N
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 184 DSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLV 243
+++++F M V+ D +V+VL A LQ+L G I K G + +L L
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 244 SLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSS 303
++Y+KCG ++TA++LF + P+LI +NAMISGY NG ++ +F E++ R +
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 304 TMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDES 363
++ I + G L S+ Y +S + +S+AL ++++ ++ AR +FD +
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 364 PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGK 423
++ V W+AMI GY +G A+SL++ M PN VT L AC G + G
Sbjct: 385 LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444
Query: 424 WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVT-WNTII 476
W + + P +ID+ + G++ +A ++ M + VT W ++
Sbjct: 445 WFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 536 bits (1381), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/612 (42%), Positives = 382/612 (62%), Gaps = 8/612 (1%)
Query: 166 TVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQC 225
+ WN + L + +SI ++R M+ +G D+ + +L + A L G + C
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 226 LAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIA--YNAMISGYTCNGEI 283
K G + +VLT L+S+Y KCG ++ AR +F + ++ YNA+ISGYT N ++
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 284 ESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTAL 343
+ +FR + +G V S TM+GL+P+ + +L L S+ G CVK G S +V +
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 344 TTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNP 403
T+Y + ++ R+LFDE P K + WNA+ISGY+QNGL L L+++M ++ P+P
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 404 VTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDS 463
T+ + LS+CA LG+ G V +L++S PN++VS A I MYA+CGN+++AR +FD
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 464 MSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREG 523
M K+ V+W +I YG+HG G L LF +M+ GI P G F+ +L ACSH+GL +G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 524 EEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACK 583
E+F M +Y++EP EH++C+VD+LGRAG+L++A+EFI +MPVEP AVWG LLGACK
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 584 IHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGC 643
IHKN D+A +A ++ E +P ++GYYVL+SNIYS +N IR + ++R K PG
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497
Query: 644 TLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELM 703
+ +E G H+F++GDRSH ++ ML++L + E+ + EE
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRG------EEVSST 551
Query: 704 VNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHH 763
HSE+LAIAF ++ + PGTEI +IKNLRVC DCH K +SKI +R VVRDA+RFH+
Sbjct: 552 TREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHY 611
Query: 764 FKDGICSCGDYW 775
FKDG+CSC DYW
Sbjct: 612 FKDGVCSCKDYW 623
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 208/422 (49%), Gaps = 12/422 (2%)
Query: 70 FNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLLHAHA 126
+NV ++ + + S SI+LY + LR+ +PD +++ F + + G LH H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSM-LRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERD--TVAWNTVITGLVRNCYYDD 184
G + FV ++L+ +Y K V ARKVF+E P+ +V +N +I+G N D
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLP--AVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
+ +FR M GV VDS T++ ++P V E LG + QC+ K G + VL
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV--KGGLDSEVAVLNSF 197
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
+++Y KCG + R LF + LI +NA+ISGY+ NG ++L+ ++ SG
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
T+V ++ + G + + +G + N VS A ++Y+R + AR +FD
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 363 SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG 422
P K++ +W AMI Y +G+ E L LF +M+ P+ LSAC+ G G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 423 KWVHQLIKSK-NLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYG 480
+ + +K + LEP + L+D+ + G + EA + +SM E + W ++
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 481 LH 482
+H
Sbjct: 438 IH 439
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 535 bits (1379), Expect = e-152, Method: Compositional matrix adjust.
Identities = 276/750 (36%), Positives = 429/750 (57%), Gaps = 5/750 (0%)
Query: 30 NGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIAL 89
NG+ D +KL+ + G + A +F V+ +N+L+ + + S SI L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 90 YTHLRLRTNLAPDNYTYAF---TIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYF 146
+ + + + + D+YT++ + ++ G LH + GFG V +SLV Y
Sbjct: 183 FKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 147 KFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVT 206
K RV ARKVFDEM ERD ++WN++I G V N + + VF M+ +G+++D T+V+
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 207 VLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPD 266
V A+ + + +G + + K F R+ L+ +YSKCGD+ +A+ +F +
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 267 LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQG 326
+++Y +MI+GY G +VKLF E+ G T+ ++ + + L +
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 327 YCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTET 386
+ ++ + VS AL +Y++ + A +F E K + +WN +I GY++N
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 387 ALSLFQEMMTTE-FTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI 445
ALSLF ++ + F+P+ T+ L ACA L + G+ +H I + +V+ +L+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 446 DMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGV 505
DMYAKCG + A LFD ++ K+ V+W +I GYG+HG+G EA+ LF +M +GI +
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601
Query: 506 TFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRT 565
+F+S+LYACSH+GLV EG F+ M ++ +IEP EH+AC+VD+L R G L KA FI
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 661
Query: 566 MPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKA 625
MP+ P +WG LL C+IH + +A +E++FEL+P + GYYVL++NIY+ + +
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQV 721
Query: 626 ASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQ 685
+R+ +R L K PGC+ IEI G ++FV+GD S+ I A L K+ +M E GY
Sbjct: 722 KRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYS 781
Query: 686 TETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFI 745
T +L D EE EKE + HSEKLA+A +I++ G IR+ KNLRVC DCH KF+
Sbjct: 782 PLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFM 841
Query: 746 SKITERVIVVRDANRFHHFKDGICSCGDYW 775
SK+T R IV+RD+NRFH FKDG CSC +W
Sbjct: 842 SKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 204/390 (52%), Gaps = 4/390 (1%)
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
V+ +D T+ +VL A+ + L G + GF D+ + + L +Y+ CGD+
Sbjct: 86 VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDL 145
Query: 253 STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS 312
A +F + + +N +++ +G+ S+ LF++++ SG + S T +
Sbjct: 146 KEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSF 205
Query: 313 SPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWN 372
S +H + G+ +KSG +SV +L Y + +D ARK+FDE E+ V +WN
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265
Query: 373 AMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQL-IKS 431
++I+GY NGL E LS+F +M+ + + TI + + CA +S G+ VH + +K+
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKL 491
+ + +T L+DMY+KCG++ A+ +F MS+++ V++ ++I GY G EA+KL
Sbjct: 326 CFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 492 FKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILG 551
F+EM GI P T ++L C+ L+ EG+ + H+ + + + ++D+
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWIKENDLGFDIFVSNALMDMYA 443
Query: 552 RAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
+ G +++A M V+ + W T++G
Sbjct: 444 KCGSMQEAELVFSEMRVKDIIS-WNTIIGG 472
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 21/284 (7%)
Query: 17 LPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKG 76
L ++H + N D+ L G+ + A +F +R DI +N ++ G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 77 FSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA----SPDDKYGMLLHAHAIVDGFG 132
+S N + +++L+ L +PD T A + A S DK G +H + + +G+
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK-GREIHGYIMRNGYF 531
Query: 133 SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDM 192
S+ V +SLVD+Y K + LA +FD++ +D V+W +I G + + ++I +F M
Sbjct: 532 SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVG------MGIQCLAFKFGFHRDAYVLTGLVSLY 246
G++ D + V++L A + + G M +C K + Y +V +
Sbjct: 592 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC---KIEPTVEHYAC--IVDML 646
Query: 247 SKCGDISTA-RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKL 289
++ GD+ A R + M PD + A++ C I VKL
Sbjct: 647 ARTGDLIKAYRFIENMPIPPDATIWGALL----CGCRIHHDVKL 686
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 533 bits (1372), Expect = e-151, Method: Compositional matrix adjust.
Identities = 289/778 (37%), Positives = 444/778 (57%), Gaps = 29/778 (3%)
Query: 22 QIHAQLILNGYQSDLASITK----LTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGF 77
QIHA + GY D ++ L +K DFGA +F + + +N L+
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK---VFDRISERNQVSWNSLISSL 174
Query: 78 SVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS-----PDD-KYGMLLHAHAIVDGF 131
++ + + L N+ P ++T + A P+ G +HA+ + G
Sbjct: 175 CSFEKWEMALEAFRCM-LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG- 232
Query: 132 GSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRD 191
N F+ ++LV +Y K ++ ++ + RD V WNTV++ L +N ++++ R+
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 192 MVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFG-FHRDAYVLTGLVSLYSKCG 250
MV GV+ D T+ +VLPA + L+ L G + A K G +++V + LV +Y C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS-GQRVSSSTMVGLI 309
+ + R +F + + +NAMI+GY+ N + ++ LF + S G +S+TM G++
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 310 PVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVA 369
P G +I G+ VK G + V L +YSRL +ID+A ++F + ++ +
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 370 AWNAMISGYTQNGLTETALSLFQEMMTTE-----------FTPNPVTITTTLSACAQLGS 418
WN MI+GY + E AL L +M E PN +T+ T L +CA L +
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFG 478
L+ GK +H NL ++ V +AL+DMYAKCG + +R++FD + +KN +TWN II
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 592
Query: 479 YGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEP 538
YG+HG G EA+ L + M+ G+ P+ VTF+S+ ACSH+G+V EG IF+ M Y +EP
Sbjct: 593 YGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 652
Query: 539 LAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA-VWGTLLGACKIHKNTDIARVASER 597
++H+AC+VD+LGRAG++++A + + MP + A W +LLGA +IH N +I +A++
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQN 712
Query: 598 LFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVS 657
L +L+P +YVLL+NIYS + KA +R K++ + K PGC+ IE H FV+
Sbjct: 713 LIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVA 772
Query: 658 GDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFAL 717
GD SH + + LE L +MR+ GY +T LH+VEE+EKE+++ HSEKLAIAF +
Sbjct: 773 GDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGI 832
Query: 718 ITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+ T PGT IR+ KNLRVC DCH ATKFISKI +R I++RD RFH FK+G CSCGDYW
Sbjct: 833 LNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 232/494 (46%), Gaps = 34/494 (6%)
Query: 164 RDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI 223
R W ++ VR+ +++ + DM+ G++ D+ +L AVA+LQ++ +G I
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 224 QCLAFKFGFHRDAY-VLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
+KFG+ D+ V LV+LY KCGD +F I + + +++N++IS +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSS----PFGHLHLTCSIQGYCVKSGAISNSS 338
E +++ FR +L SS T+V ++ S P G L + + Y ++ G + NS
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG-LMMGKQVHAYGLRKGEL-NSF 237
Query: 339 VSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE 398
+ L +Y +L ++ ++ L + + WN ++S QN AL +EM+
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 399 FTPNPVTITTTLSACAQLGSLSFGKWVHQL-IKSKNLEPNIYVSTALIDMYAKCGNISEA 457
P+ TI++ L AC+ L L GK +H +K+ +L+ N +V +AL+DMY C +
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 458 RQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS-GIHPSGVTFLSILYACSH 516
R++FD M ++ WN +I GY + + EAL LF M S G+ + T ++ AC
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 517 AGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWG 576
+G E I H V K ++ ++D+ R G+++ A+ M + W
Sbjct: 418 SGAFSRKEAI-HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWN 475
Query: 577 TLL-----------GACKIHKNTDIARVASE--RLFELDPGSVGYYVLLSNIYSVGRNFP 623
T++ +HK ++ R S+ L P S+ +L P
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTIL----------P 525
Query: 624 KAASIREVAKKRKL 637
A++ +AK +++
Sbjct: 526 SCAALSALAKGKEI 539
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 529 bits (1363), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/763 (36%), Positives = 437/763 (57%), Gaps = 17/763 (2%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q+H Q I G+ D++ T L + R +F ++ ++ + L+ G++ N+
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYG---MLLHAHAIVDGFGSNLFVC 138
+ L+ ++ P+++T+A + ++ G + +H + +G + V
Sbjct: 174 MNDEVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+SL++LY K V AR +FD+ + V WN++I+G N +++ +F M N V+
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
+ ++ +V+ A L+EL + C K+GF D + T L+ YSKC + A L
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 259 FGMIG-KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS---STMVGLIPVSSP 314
F IG +++++ AMISG+ N E +V LF E+ G R + S ++ +PV SP
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAM 374
+ VK+ +S+V TAL Y +L +++ A K+F +K + AW+AM
Sbjct: 413 -------SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 375 ISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL-GSLSFGKWVHQLIKSKN 433
++GY Q G TE A+ +F E+ PN T ++ L+ CA S+ GK H
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 434 LEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFK 493
L+ ++ VS+AL+ MYAK GNI A ++F EK+ V+WN++I GY HG +AL +FK
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 494 EMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRA 553
EM + GVTF+ + AC+HAGLV EGE+ F MV +I P EH++CMVD+ RA
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 554 GQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLS 613
GQLEKA++ I MP G +W T+L AC++HK T++ R+A+E++ + P YVLLS
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705
Query: 614 NIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLE 673
N+Y+ ++ + A +R++ +R + K PG + IE+ T+ F++GDRSH IY LE
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 765
Query: 674 KLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLR 733
L+ +++++GY+ +T L D+++E KE ++ HSE+LAIAF LI T G+ + IIKNLR
Sbjct: 766 DLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLR 825
Query: 734 VCLDCHTATKFISKITERVIVVRDANRFHHF-KDGICSCGDYW 775
VC DCH K I+KI ER IVVRD+NRFHHF DG+CSCGD+W
Sbjct: 826 VCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 258/537 (48%), Gaps = 12/537 (2%)
Query: 73 LVKGFSVNASPSSSIALYTHL-RLRTNLAPDNYTYAFTIAAS-PDDKYGMLLHAHAIVDG 130
L+ GFS + + L+ ++ RL + ++ ++A+ D+ +G LH I G
Sbjct: 64 LLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFG 123
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFR 190
F ++ V +SLVD Y K S RKVFDEM ER+ V W T+I+G RN D+ + +F
Sbjct: 124 FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFM 183
Query: 191 DMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
M G Q +S T L +AE G G+ + + K G + V L++LY KCG
Sbjct: 184 RMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCG 243
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
++ AR+LF ++ +N+MISGY NG ++ +F + ++ R+S S+ +I
Sbjct: 244 NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK 303
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE-SPEKTVA 369
+ + L T + VK G + + ++ TAL YS+ + A +LF E V
Sbjct: 304 LCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVV 363
Query: 370 AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLI 429
+W AMISG+ QN E A+ LF EM PN T + L+A + VH +
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQV 419
Query: 430 KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEAL 489
N E + V TAL+D Y K G + EA ++F + +K+ V W+ ++ GY G A+
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 490 KLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDI 549
K+F E+ GI P+ TF SIL C+ + FH K R++ + ++ +
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539
Query: 550 LGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH----KNTDIARVASERLFELD 602
+ G +E A E + E W +++ H K D+ + +R ++D
Sbjct: 540 YAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 194/412 (47%), Gaps = 6/412 (1%)
Query: 149 SRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVL 208
SR+ A +FD+ P RD ++ +++ G R+ ++ ++F ++ G+++D + +VL
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 209 PAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLI 268
A L + G + C KFGF D V T LV Y K + R +F + + +++
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 269 AYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYC 328
+ +ISGY N + + LF + G + +S T + V + G +
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
VK+G VS +L +Y + + AR LFD++ K+V WN+MISGY NGL AL
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMY 448
+F M + + + + CA L L F + +H + + + TAL+ Y
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 449 AKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
+KC + +A +LF + N V+W +I G+ + EA+ LF EM G+ P+ T+
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 508 LSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
IL A V E+ H V K E + ++D + G++E+A
Sbjct: 401 SVILTALP----VISPSEV-HAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 528 bits (1360), Expect = e-150, Method: Compositional matrix adjust.
Identities = 301/821 (36%), Positives = 452/821 (55%), Gaps = 59/821 (7%)
Query: 10 FINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALF--FSVRNPDI 67
FI+K + + IH +L+ G + L + L G HA +L F + +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGV 92
Query: 68 FLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLLHA 124
+ +N L++ + N + + L+ L + PDNYT+ F A + + G HA
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFG-LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 125 HAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDD 184
++V GF SN+FV ++LV +Y + + ARKVFDEM D V+WN++I +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 185 SIQVFRDMVAN-GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLV 243
++++F M G + D+ T+V VLP A L +G + C A ++ +V LV
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 244 SLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF------------- 290
+Y+KCG + A +F + D++++NAM++GY+ G E +V+LF
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 291 ----------------------RELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYC 328
R++L SG + + T++ ++ + G L I Y
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 329 VK-------SGAISNSSVSTALTTIYSRLNEIDMARKLFDE-SP-EKTVAAWNAMISGYT 379
+K +G + V L +Y++ ++D AR +FD SP E+ V W MI GY+
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 380 QNGLTETALSLFQEMMTTEFT--PNPVTITTTLSACAQLGSLSFGKWVHQ--LIKSKNLE 435
Q+G AL L EM + PN TI+ L ACA L +L GK +H L +N
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 436 PNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM 495
P ++VS LIDMYAKCG+IS+AR +FD+M KN VTW +++ GYG+HGYG EAL +F EM
Sbjct: 512 P-LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 496 LHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQ 555
G GVT L +LYACSH+G++ +G E F+ M + + P EH+AC+VD+LGRAG+
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630
Query: 556 LEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNI 615
L AL I MP+EP P VW L C+IH ++ A+E++ EL G Y LLSN+
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690
Query: 616 YSVGRNFPKAASIREVAKKRKLAKTPGCTLIE-INGTTHVFVSGDRSHSHATAIYAMLEK 674
Y+ + IR + + + + K PGC+ +E I GTT FV GD++H HA IY +L
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLLD 749
Query: 675 LTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRV 734
++++IGY ET +LHDV++EEK+ ++ HSEKLA+A+ ++TT G IRI KNLRV
Sbjct: 750 HMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRV 809
Query: 735 CLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
C DCHTA ++S+I + I++RD++RFHHFK+G CSC YW
Sbjct: 810 CGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/568 (22%), Positives = 244/568 (42%), Gaps = 61/568 (10%)
Query: 5 NSIITFINKAC----NLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFF 60
N F+ KAC ++ HA ++ G+ S++ L + AR +F
Sbjct: 127 NYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFD 186
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDDK 117
+ D+ +N +++ ++ P ++ +++ + PDN T + A+
Sbjct: 187 EMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHS 246
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
G LH A+ N+FV + LVD+Y K + A VF M +D V+WN ++ G
Sbjct: 247 LGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 178 RNCYYDDSIQVF-----------------------------------RDMVANGVQVDST 202
+ ++D++++F R M+++G++ +
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 203 TVVTVLPAVAELQELGVGMGIQCLAFKF-------GFHRDAYVLTGLVSLYSKCGDISTA 255
T+++VL A + L G I C A K+ G + V+ L+ +Y+KC + TA
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 256 RLLFGMIG--KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG--QRVSSSTMVGLIPV 311
R +F + + D++ + MI GY+ +G+ +++L E+ R ++ T+ +
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 312 SSPFGHLHLTCSIQGYCVKSGAISNS-SVSTALTTIYSRLNEIDMARKLFDESPEKTVAA 370
+ L + I Y +++ + VS L +Y++ I AR +FD K
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT 546
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLI 429
W ++++GY +G E AL +F EM F + VT+ L AC+ G + G ++ +++
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Query: 430 KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHG---YG 485
+ P L+D+ + G ++ A +L + M E V W + +HG G
Sbjct: 607 TVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666
Query: 486 HEALKLFKEMLHSGIHPSGVTFLSILYA 513
A + E+ + H T LS LYA
Sbjct: 667 EYAAEKITELASN--HDGSYTLLSNLYA 692
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 518 bits (1334), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/667 (39%), Positives = 388/667 (58%), Gaps = 38/667 (5%)
Query: 114 PDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVI 173
PD + +H+ I++ N + L+ Y V ARKVFDE+PER+ + N +I
Sbjct: 53 PDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMI 112
Query: 174 TGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH 233
V N +Y + ++VF M V+ D T VL A + + +G I A K G
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 234 RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL 293
+V GLVS+Y KCG +S ARL+ + + D++++N+++ GY N + ++++ RE+
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 294 LVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEI 353
+ TM L+P A+SN++ +
Sbjct: 233 ESVKISHDAGTMASLLP----------------------AVSNTTTENVM---------- 260
Query: 354 DMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSAC 413
+ +F + +K++ +WN MI Y +N + A+ L+ M F P+ V+IT+ L AC
Sbjct: 261 -YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 414 AQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWN 473
+LS GK +H I+ K L PN+ + ALIDMYAKCG + +AR +F++M ++ V+W
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
+I YG G G +A+ LF ++ SG+ P + F++ L ACSHAGL+ EG F M +
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARV 593
Y+I P EH ACMVD+LGRAG++++A FI+ M +EP VWG LLGAC++H +TDI +
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 594 ASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTH 653
A+++LF+L P GYYVLLSNIY+ + + +IR + K + L K PG + +E+N H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 654 VFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAI 713
F+ GDRSH + IY L+ L KM+E+GY ++ ++LHDVEEE+KE + VHSEKLAI
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619
Query: 714 AFALITTEPGTE-----IRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGI 768
FAL+ T+ E IRI KNLR+C DCH A K IS+IT R I++RD NRFH F+ G+
Sbjct: 620 VFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGV 679
Query: 769 CSCGDYW 775
CSCGDYW
Sbjct: 680 CSCGDYW 686
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 54 HARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS 113
+ + +FF + + +NV++ + NA P ++ LY+ + PD + + A
Sbjct: 261 YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA-DGFEPDAVSITSVLPAC 319
Query: 114 PDD---KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWN 170
D G +H + NL + ++L+D+Y K + AR VF+ M RD V+W
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 171 TVITGL---VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLA 227
+I+ R C D++ +F + +G+ DS VT L A + L G
Sbjct: 380 AMISAYGFSGRGC---DAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC---- 432
Query: 228 FKFGFHRDAYVLTG-------LVSLYSKCGDISTA-RLLFGMIGKPDLIAYNAMI 274
F D Y +T +V L + G + A R + M +P+ + A++
Sbjct: 433 --FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 514 bits (1325), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/689 (37%), Positives = 405/689 (58%), Gaps = 36/689 (5%)
Query: 123 HAHAIVDGFGSNLFVCSSLVDL--YFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNC 180
H H I G S+ + S L + F+ + ARKVFDE+P+ ++ AWNT+I
Sbjct: 50 HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP 109
Query: 181 YYDDSIQVFRDMVANG-VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVL 239
SI F DMV+ + T ++ A AE+ L +G + +A K D +V
Sbjct: 110 DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVA 169
Query: 240 TGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR 299
L+ Y CGD+ +A +F I + D++++N+MI+G+ G + +++LF+++ +
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 300 VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKL 359
S TMVG++ + +L + Y ++ N +++ A+ +Y++ I+ A++L
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 360 FD-------------------------------ESPEKTVAAWNAMISGYTQNGLTETAL 388
FD P+K + AWNA+IS Y QNG AL
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 389 SLFQEM-MTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDM 447
+F E+ + N +T+ +TLSACAQ+G+L G+W+H IK + N +V++ALI M
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 448 YAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
Y+KCG++ ++R++F+S+ +++ W+ +I G +HG G+EA+ +F +M + + P+GVTF
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469
Query: 508 LSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP 567
++ ACSH GLV E E +FH M + Y I P +H+AC+VD+LGR+G LEKA++FI MP
Sbjct: 470 TNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP 529
Query: 568 VEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAAS 627
+ P +VWG LLGACKIH N ++A +A RL EL+P + G +VLLSNIY+ + +
Sbjct: 530 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSE 589
Query: 628 IREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTE 687
+R+ + L K PGC+ IEI+G H F+SGD +H + +Y L ++ K++ GY+ E
Sbjct: 590 LRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPE 649
Query: 688 TVTSLHDVEEEE-KELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFIS 746
L +EEEE KE +N+HSEKLAI + LI+TE IR+IKNLRVC DCH+ K IS
Sbjct: 650 ISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLIS 709
Query: 747 KITERVIVVRDANRFHHFKDGICSCGDYW 775
++ +R I+VRD RFHHF++G CSC D+W
Sbjct: 710 QLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 245/520 (47%), Gaps = 39/520 (7%)
Query: 3 QRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKL--TQKLFDFGATRHARALFF 60
+R+ I+ I + +L L Q H +I G SD S +KL L F + +AR +F
Sbjct: 29 ERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFD 88
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK--- 117
+ P+ F +N L++ ++ P SI + + + P+ YT+ F I A+ +
Sbjct: 89 EIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLS 148
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
G LH A+ GS++FV +SL+ YF + A KVF + E+D V+WN++I G V
Sbjct: 149 LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAY 237
+ D ++++F+ M + V+ T+V VL A A+++ L G + + + +
Sbjct: 209 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 238 VLTGLVSLYSKCGDISTARLLF-------------------------------GMIGKPD 266
+ ++ +Y+KCG I A+ LF + + D
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 267 LIAYNAMISGYTCNGEIESSVKLFREL-LVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQ 325
++A+NA+IS Y NG+ ++ +F EL L +++ T+V + + G L L I
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 326 GYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTE 385
Y K G N V++AL +YS+ +++ +R++F+ ++ V W+AMI G +G
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 386 TALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV-HQLIKSKNLEPNIYVSTAL 444
A+ +F +M PN VT T AC+ G + + + HQ+ + + P +
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 445 IDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHG 483
+D+ + G + +A + ++M +T W ++ +H
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 509 bits (1312), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/805 (34%), Positives = 445/805 (55%), Gaps = 44/805 (5%)
Query: 13 KACN-LPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSV-RNPD---- 66
K C + L H L G +D+++ITKL + + G TR + + V N +
Sbjct: 40 KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELG-TRESLSFAKEVFENSESYGT 98
Query: 67 IFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLLH 123
F++N L++G++ + + +I L+ + + + ++PD YT+ F ++A + G+ +H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 124 AHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYD 183
+ G+ +LFV +SLV Y + + ARKVFDEM ER+ V+W ++I G R +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 184 DSIQVFRDMVANG-VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
D++ +F MV + V +S T+V V+ A A+L++L G + G + +++ L
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
V +Y KC I A+ LF G +L NAM S Y G ++ +F ++ SG R
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
+M+ I S ++ S GY +++G S ++ AL +Y + + D A ++FD
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 363 SPEKTVAAWNAMISGYTQNG-------------------------------LTETALSLF 391
KTV WN++++GY +NG L E A+ +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 392 QEMMTTE-FTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAK 450
M + E + VT+ + SAC LG+L KW++ I+ ++ ++ + T L+DM+++
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 451 CGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSI 510
CG+ A +F+S++ ++ W I + G A++LF +M+ G+ P GV F+
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 511 LYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEP 570
L ACSH GLV++G+EIF+ M+ + + P H+ CMVD+LGRAG LE+A++ I MP+EP
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 571 GPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIRE 630
+W +LL AC++ N ++A A+E++ L P G YVLLSN+Y+ + A +R
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 631 VAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVT 690
K++ L K PG + I+I G TH F SGD SH I AML++++ + +G+ +
Sbjct: 698 SMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSN 757
Query: 691 SLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITE 750
L DV+E+EK M++ HSEKLA+A+ LI++ GT IRI+KNLRVC DCH+ KF SK+
Sbjct: 758 VLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYN 817
Query: 751 RVIVVRDANRFHHFKDGICSCGDYW 775
R I++RD NRFH+ + G CSCGD+W
Sbjct: 818 REIILRDNNRFHYIRQGKCSCGDFW 842
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 508 bits (1307), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/620 (40%), Positives = 374/620 (60%), Gaps = 9/620 (1%)
Query: 165 DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQ 224
D +WN+VI L R+ +++ F M + ++ + A + L ++ G
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 225 CLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIE 284
AF FG+ D +V + L+ +YS CG + AR +F I K +++++ +MI GY NG
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 285 SSVKLFRELLVSGQR------VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSS 338
+V LF++LLV + S +V +I S LT SI + +K G S
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 339 VSTALTTIYSRLNE--IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMT 396
V L Y++ E + +ARK+FD+ +K ++N+++S Y Q+G++ A +F+ ++
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 397 TEF-TPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNIS 455
+ T N +T++T L A + G+L GK +H + LE ++ V T++IDMY KCG +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 456 EARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACS 515
AR+ FD M KN +W +I GYG+HG+ +AL+LF M+ SG+ P+ +TF+S+L ACS
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 516 HAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVW 575
HAGL EG F+ M ++ +EP EH+ CMVD+LGRAG L+KA + I+ M ++P +W
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 576 GTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKR 635
+LL AC+IHKN ++A ++ RLFELD + GYY+LLS+IY+ + +R + K R
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 636 KLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDV 695
L K PG +L+E+NG HVF+ GD H IY L +L K+ E GY + T + HDV
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDV 579
Query: 696 EEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVV 755
+EEEKE+ + VHSEKLAIAF ++ T PG+ + ++KNLRVC DCH K ISKI +R VV
Sbjct: 580 DEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVV 639
Query: 756 RDANRFHHFKDGICSCGDYW 775
RDA RFHHFKDG CSCGDYW
Sbjct: 640 RDAKRFHHFKDGGCSCGDYW 659
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 222/438 (50%), Gaps = 21/438 (4%)
Query: 62 VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKY 118
V D+F +N ++ + + + ++ ++ +R + +L P ++ I A D
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMR-KLSLYPTRSSFPCAIKACSSLFDIFS 94
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G H A V G+ S++FV S+L+ +Y ++ ARKVFDE+P+R+ V+W ++I G
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 179 NCYYDDSIQVFRDMVA------NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF 232
N D++ +F+D++ + + +DS +V+V+ A + + G+ I K GF
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 233 HRDAYVLTGLVSLYSKCGD--ISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
R V L+ Y+K G+ ++ AR +F I D ++YN+++S Y +G + ++F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 291 REL----LVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
R L +V+ ++ ST+ L+ VS G L + I ++ G + V T++ +
Sbjct: 275 RRLVKNKVVTFNAITLSTV--LLAVSHS-GALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
Y + ++ ARK FD K V +W AMI+GY +G AL LF M+ + PN +T
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 407 TTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
+ L+AC+ G G +W + + +EP + ++D+ + G + +A L M
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 466 EK-NTVTWNTIIFGYGLH 482
K +++ W++++ +H
Sbjct: 452 MKPDSIIWSSLLAACRIH 469
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 157/310 (50%), Gaps = 12/310 (3%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q H Q + GYQSD+ + L G AR +F + +I + +++G+ +N
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 82 SPSSSIALYTHLRLRTN-----LAPDNYTYAFTIAAS---PDDKYGMLLHAHAIVDGFGS 133
+ +++L+ L + N + D+ I+A P +H+ I GF
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 134 NLFVCSSLVDLYFKFSR--VGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRD 191
+ V ++L+D Y K V +ARK+FD++ ++D V++N++++ ++ +++ +VFR
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 192 MVANG-VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
+V N V ++ T+ TVL AV+ L +G I + G D V T ++ +Y KCG
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
+ TAR F + ++ ++ AMI+GY +G +++LF ++ SG R + T V ++
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 311 VSSPFGHLHL 320
S G LH+
Sbjct: 397 ACSHAG-LHV 405
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/804 (33%), Positives = 445/804 (55%), Gaps = 44/804 (5%)
Query: 13 KACN-LPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRH----ARALFFSVRN-PD 66
K C + L H L G +D+++ITKL + + G TR A+ +F + +
Sbjct: 40 KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELG-TRESLSFAKEVFENSESYGT 98
Query: 67 IFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLLH 123
F++N L++G++ + + +I L+ + + + ++PD YT+ F ++A + G+ +H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 124 AHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYD 183
+ G+ +LFV +SLV Y + + ARKVFDEM ER+ V+W ++I G R +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 184 DSIQVFRDMVANG-VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
D++ +F MV + V +S T+V V+ A A+L++L G + G + +++ L
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
V +Y KC I A+ LF G +L NAM S Y G ++ +F ++ SG R
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
+M+ I S ++ S GY +++G S ++ AL +Y + + D A ++FD
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 363 SPEKTVAAWNAMISGYTQNG-------------------------------LTETALSLF 391
KTV WN++++GY +NG L E A+ +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 392 QEMMTTE-FTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAK 450
M + E + VT+ + SAC LG+L KW++ I+ ++ ++ + T L+DM+++
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 451 CGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSI 510
CG+ A +F+S++ ++ W I + G A++LF +M+ G+ P GV F+
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 511 LYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEP 570
L ACSH GLV++G+EIF+ M+ + + P H+ CMVD+LGRAG LE+A++ I MP+EP
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 571 GPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIRE 630
+W +LL AC++ N ++A A+E++ L P G YVLLSN+Y+ + A +R
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 631 VAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVT 690
K++ L K PG + I+I G TH F SGD SH I AML++++ + +G+ +
Sbjct: 698 SMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSN 757
Query: 691 SLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITE 750
L DV+E+EK M++ HSEKLA+A+ LI++ GT IRI+KNLRVC DCH+ KF SK+
Sbjct: 758 VLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYN 817
Query: 751 RVIVVRDANRFHHFKDGICSCGDY 774
R I++RD NRFH+ + G CSCGD+
Sbjct: 818 REIILRDNNRFHYIRQGKCSCGDF 841
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/757 (36%), Positives = 436/757 (57%), Gaps = 6/757 (0%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
++ Q++ G++SDL L G AR +F + D+ +N L+ G+S +
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPD---DKYGMLLHAHAIVDGFGSNLFVCS 139
++ +Y L+ + + PD++T + + A + K G LH A+ G S + V +
Sbjct: 188 YEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 140 SLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQV 199
LV +Y KF R AR+VFDEM RD+V++NT+I G ++ ++S+++F + + + +
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKP 305
Query: 200 DSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF 259
D TV +VL A L++L + I K GF ++ V L+ +Y+KCGD+ TAR +F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 260 GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 319
+ D +++N++ISGY +G++ ++KLF+ +++ ++ T + LI VS+ L
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 320 LTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYT 379
+ +KSG + SVS AL +Y++ E+ + K+F WN +IS
Sbjct: 426 FGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACV 485
Query: 380 QNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIY 439
+ G T L + +M +E P+ T TL CA L + GK +H + E +
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
+ ALI+MY+KCG + + ++F+ MS ++ VTW +I+ YG++G G +AL+ F +M SG
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605
Query: 500 IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
I P V F++I+YACSH+GLV EG F M Y+I+P+ EH+AC+VD+L R+ ++ KA
Sbjct: 606 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKA 665
Query: 560 LEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVG 619
EFI+ MP++P ++W ++L AC+ + + A S R+ EL+P GY +L SN Y+
Sbjct: 666 EEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAAL 725
Query: 620 RNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKM 679
R + K + IR+ K + + K PG + IE+ HVF SGD S + AIY LE L M
Sbjct: 726 RKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLM 785
Query: 680 REIGYQTETV-TSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDC 738
+ GY + S + EEEEK ++ HSE+LAIAF L+ TEPGT ++++KNLRVC DC
Sbjct: 786 AKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDC 845
Query: 739 HTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
H TK ISKI R I+VRDANRFH FKDG CSC D W
Sbjct: 846 HEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 259 bits (661), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 182/571 (31%), Positives = 292/571 (51%), Gaps = 23/571 (4%)
Query: 10 FINKA----CNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR-N 64
FI++A NL L +IHA +I G S KL K F + ++F V
Sbjct: 9 FISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA 68
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGML 121
+++L+N +++ FS N ++ Y LR + ++PD YT+ I A D + G L
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLR-ESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
++ + GF S+LFV ++LVD+Y + + AR+VFDEMP RD V+WN++I+G + Y
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
Y+++++++ ++ + + DS TV +VLPA L + G G+ A K G + V G
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 242 LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
LV++Y K + AR +F + D ++YN MI GY +E SV++F E L
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL------- 300
Query: 302 SSTMVGLIPVSSPF---GHLH---LTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDM 355
L+ VSS GHL L I Y +K+G + S+V L +Y++ ++
Sbjct: 301 DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMIT 360
Query: 356 ARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQ 415
AR +F+ K +WN++ISGY Q+G A+ LF+ MM E + +T +S +
Sbjct: 361 ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Query: 416 LGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTI 475
L L FGK +H + ++ VS ALIDMYAKCG + ++ ++F SM +TVTWNT+
Sbjct: 421 LADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTV 480
Query: 476 IFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYR 535
I G L++ +M S + P TFL L C+ R G+EI H + ++
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEI-HCCLLRFG 539
Query: 536 IEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
E + ++++ + G LE + M
Sbjct: 540 YESELQIGNALIEMYSKCGCLENSSRVFERM 570
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 119/223 (53%), Gaps = 9/223 (4%)
Query: 311 VSSPFGHLHLTCS--------IQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
VSSPF L+ S I + G S+ S L YS E + +F
Sbjct: 5 VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR 64
Query: 363 -SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
SP K V WN++I +++NGL AL + ++ ++ +P+ T + + ACA L
Sbjct: 65 VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
G V++ I E +++V AL+DMY++ G ++ ARQ+FD M ++ V+WN++I GY
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGE 524
HGY EAL+++ E+ +S I P T S+L A + +V++G+
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 490 bits (1261), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/735 (35%), Positives = 413/735 (56%), Gaps = 11/735 (1%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHL-RLRTNLAPDNYTYAF 108
G AR LF ++ + + + +L+ ++ N+ + L+ + R + PD+ T+
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 109 TIA----ASPDDKYGMLLHAHAIVDGFGSNLFVCSS--LVDLYFKFSRVGLARKVFDEMP 162
+ A P + G + HA A+ GF +N F+ S L+ Y + R+ LA +F+E+P
Sbjct: 153 LLPGCNDAVPQNAVGQV-HAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 163 ERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG 222
E+D+V +NT+ITG ++ Y +SI +F M +G Q T VL AV L + +G
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 223 IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
+ L+ GF RDA V ++ YSK + R+LF + + D ++YN +IS Y+ +
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA 342
E+S+ FRE+ G + ++ +++ L + + + + A S V +
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 343 LTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
L +Y++ + A +F P++T +W A+ISGY Q GL L LF +M + +
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQ-LIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
T T L A A SL GK +H +I+S NLE N++ + L+DMYAKCG+I +A Q+F
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 462 DSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
+ M ++N V+WN +I + +G G A+ F +M+ SG+ P V+ L +L ACSH G V
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
+G E F M Y I P +H+ACM+D+LGR G+ +A + + MP EP +W ++L A
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Query: 582 CKIHKNTDIARVASERLFELDP-GSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKT 640
C+IHKN +A A+E+LF ++ YV +SNIY+ + K +++ ++R + K
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690
Query: 641 PGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEK 700
P + +E+N HVF S D++H + I + +LT ++ GY+ +T + + DV+E+ K
Sbjct: 691 PAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMK 750
Query: 701 ELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANR 760
+ HSE+LA+AFALI+T G I ++KNLR C DCH A K ISKI +R I VRD +R
Sbjct: 751 IESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSR 810
Query: 761 FHHFKDGICSCGDYW 775
FHHF +G+CSCGDYW
Sbjct: 811 FHHFSEGVCSCGDYW 825
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 228/489 (46%), Gaps = 14/489 (2%)
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
N ++++ + K V AR +FD MP+R V W ++ RN ++D++ ++FR M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 194 --ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG- 250
++ D T T+LP + + A K GF + ++ V L S C
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 251 -DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLI 309
+ A +LF I + D + +N +I+GY +G S+ LF ++ SG + S T G++
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 310 PVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVA 369
L + V +G ++SV + YS+ + + R LFDE PE
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 370 AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLI 429
++N +IS Y+Q E +L F+EM F T LS A L SL G+ +H
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 430 KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGY---GLHGYGH 486
+ ++V +L+DMYAKC EA +F S+ ++ TV+W +I GY GLHG G
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG- 436
Query: 487 EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACM 546
LKLF +M S + TF ++L A + + G+++ ++ +E + +
Sbjct: 437 --LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-L 493
Query: 547 VDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFE--LDPG 604
VD+ + G ++ A++ MP + W L+ A + + + A A ++ E L P
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 605 SVGYYVLLS 613
SV +L+
Sbjct: 553 SVSILGVLT 561
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 156/343 (45%), Gaps = 13/343 (3%)
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
H++ ++S + K GD+S+AR LF + ++ + ++ Y N + + KLFR+
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 293 LLVSGQRVSSSTM------VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNS--SVSTALT 344
+ R SS T+ L+P + + + + VK G +N +VS L
Sbjct: 136 MC----RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLL 191
Query: 345 TIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
Y + +D+A LF+E PEK +N +I+GY ++GL ++ LF +M + P+
Sbjct: 192 KSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDF 251
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
T + L A L + G+ +H L + + V ++D Y+K + E R LFD M
Sbjct: 252 TFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311
Query: 465 SEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGE 524
E + V++N +I Y +L F+EM G F ++L ++ ++ G
Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 525 EIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP 567
++ H + + +VD+ + E+A +++P
Sbjct: 372 QL-HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVST-ALIDMYAKCGNISEARQLFDSMSEKNTVTWNTI 475
G +S + V+ + KN VST +I + K G++S AR LFD+M ++ VTW +
Sbjct: 62 GQVSAARKVYDEMPHKNT-----VSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTIL 116
Query: 476 IFGYGLHGYGHEALKLFKEMLHSG--IHPSGVTFLSILYACSHA 517
+ Y + + EA KLF++M S P VTF ++L C+ A
Sbjct: 117 MGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 481 bits (1238), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/654 (36%), Positives = 373/654 (57%), Gaps = 36/654 (5%)
Query: 158 FDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQEL 217
F + +AW +VI + ++ F +M A+G D +VL + + +L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 218 GVGMGIQCLAFKFGFHRDAYVLTGLVSLYSK-----------------------CGD--- 251
G + + G D Y L+++Y+K GD
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 252 ----------ISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
I + R +F ++ + D+++YN +I+GY +G E ++++ RE+ + +
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
S T+ ++P+ S + + I GY ++ G S+ + ++L +Y++ I+ + ++F
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
+ +WN++++GY QNG AL LF++M+T + P V ++ + ACA L +L
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
GK +H + NI++++AL+DMY+KCGNI AR++FD M+ + V+W II G+ L
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAE 541
HG+GHEA+ LF+EM G+ P+ V F+++L ACSH GLV E F+ M Y + E
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 542 HHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFEL 601
H+A + D+LGRAG+LE+A FI M VEP +VW TLL +C +HKN ++A +E++F +
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
Query: 602 DPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRS 661
D ++G YVL+ N+Y+ + + A +R +K+ L K P C+ IE+ TH FVSGDRS
Sbjct: 542 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRS 601
Query: 662 HSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTE 721
H I L+ + +M + GY +T LHDV+EE K ++ HSE+LA+AF +I TE
Sbjct: 602 HPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTE 661
Query: 722 PGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
PGT IR+ KN+R+C DCH A KFISKITER I+VRD +RFHHF G CSCGDYW
Sbjct: 662 PGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 224/466 (48%), Gaps = 44/466 (9%)
Query: 59 FFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---D 115
F ++++P + + +++ F+ + S ++A + +R + PD+ + + + D
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRA-SGRCPDHNVFPSVLKSCTMMMD 120
Query: 116 DKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKF----SRVGLA----------------- 154
++G +H + G +L+ ++L+++Y K S++ +
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 155 ---------------RKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQV 199
R+VF+ MP +D V++NT+I G ++ Y+D++++ R+M ++
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 200 DSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF 259
DS T+ +VLP +E ++ G I + G D Y+ + LV +Y+K I + +F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 260 GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 319
+ D I++N++++GY NG +++LFR+++ + + + +IP + LH
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 320 LTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYT 379
L + GY ++ G SN +++AL +YS+ I ARK+FD +W A+I G+
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 380 QNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSL--SFGKWVHQLIKSKNLEPN 437
+G A+SLF+EM PN V L+AC+ +G + ++G + + + K L
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG-YFNSMTKVYGLNQE 479
Query: 438 IYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLH 482
+ A+ D+ + G + EA M E W+T++ +H
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/532 (22%), Positives = 231/532 (43%), Gaps = 74/532 (13%)
Query: 56 RALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AA 112
R +F + D+ +N ++ G++ + ++ + + T+L PD++T + + +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGT-TDLKPDSFTLSSVLPIFSE 254
Query: 113 SPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTV 172
D G +H + I G S++++ SSLVD+Y K +R+ + +VF + RD ++WN++
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 173 ITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF 232
+ G V+N Y++++++FR MV V+ + +V+PA A L L +G + + GF
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
+ ++ + LV +YSKCG+I AR +F + D +++ A+I G+ +G +V LF E
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
+ G + V + V + H+ L GY ++T +Y E
Sbjct: 435 MKRQGVK---PNQVAFVAVLTACSHVGLVDEAWGYF------------NSMTKVYGLNQE 479
Query: 353 IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
++ + A+ + G E A + +M P +T LS+
Sbjct: 480 LE---------------HYAAVADLLGRAGKLEEAYNFISKMCV---EPTGSVWSTLLSS 521
Query: 413 CAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKN---- 468
C+ +L + V + I + + E N+ + +MYA G E +L M +K
Sbjct: 522 CSVHKNLELAEKVAEKIFTVDSE-NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 580
Query: 469 -TVTWNTIIFGYGLHGY-----GHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVRE 522
+W I HG+ H ++ E L +++ G V +
Sbjct: 581 PACSW--IEMKNKTHGFVSGDRSHPSMDKINEFLK-----------AVMEQMEKEGYVAD 627
Query: 523 GEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAV 574
+ HD+ +++ E L G + +L A I T EPG +
Sbjct: 628 TSGVLHDVDEEHKRELL----------FGHSERLAVAFGIINT---EPGTTI 666
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 39/289 (13%)
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
+++ ++S++S S ++ IY+ L + A LF V AW ++I +T L AL
Sbjct: 32 IRTQSLSHTSASIVIS-IYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKAL 90
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMY 448
+ F EM + P+ + L +C + L FG+ VH I ++ ++Y AL++MY
Sbjct: 91 ASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMY 150
Query: 449 AK---------CGN---------------------------ISEARQLFDSMSEKNTVTW 472
AK GN I R++F+ M K+ V++
Sbjct: 151 AKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSY 210
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVN 532
NTII GY G +AL++ +EM + + P T S+L S V +G+EI H V
Sbjct: 211 NTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI-HGYVI 269
Query: 533 KYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
+ I+ + +VD+ ++ ++E + + G + W +L+
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVAG 317
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 131/295 (44%), Gaps = 6/295 (2%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
+S++ ++ ++ +IH +I G SD+ + L + +F +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK---YGML 121
D +N LV G+ N + ++ L+ + + + P ++ I A G
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
LH + + GFGSN+F+ S+LVD+Y K + ARK+FD M D V+W +I G + +
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG-IQCLAFKFGFHRDAYVLT 240
+++ +F +M GV+ + V VL A + + + G + +G +++
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 241 GLVSLYSKCGDISTA-RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
+ L + G + A + M +P ++ ++S + + +E + K+ ++
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/776 (34%), Positives = 413/776 (53%), Gaps = 8/776 (1%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
+S+++ K +L Q+H ++ G+ SD L F G A +F ++
Sbjct: 292 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ 351
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK---YGML 121
D +N L+ G S ++ L+ + L L PD+ T A + A D G
Sbjct: 352 RDAVTYNTLINGLSQCGYGEKAMELFKRMHL-DGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVIT--GLVRN 179
LHA+ GF SN + +L++LY K + + A F E + V WN ++ GL+ +
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 180 CYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVL 239
+S ++FR M + + T ++L L +L +G I K F +AYV
Sbjct: 471 --LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 240 TGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR 299
+ L+ +Y+K G + TA + D++++ MI+GYT + ++ FR++L G R
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 300 VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKL 359
+ + + L I SG S+ AL T+YSR +I+ +
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 360 FDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSL 419
F+++ AWNA++SG+ Q+G E AL +F M N T + + A ++ ++
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 420 SFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGY 479
GK VH +I + V ALI MYAKCG+IS+A + F +S KN V+WN II Y
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 768
Query: 480 GLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPL 539
HG+G EAL F +M+HS + P+ VT + +L ACSH GLV +G F M ++Y + P
Sbjct: 769 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Query: 540 AEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLF 599
EH+ C+VD+L RAG L +A EFI+ MP++P VW TLL AC +HKN +I A+ L
Sbjct: 829 PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 888
Query: 600 ELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGD 659
EL+P YVLLSN+Y+V + + R+ K++ + K PG + IE+ + H F GD
Sbjct: 889 ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 948
Query: 660 RSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALIT 719
++H A I+ + LT + EIGY + + L++++ E+K+ ++ +HSEKLAI+F L++
Sbjct: 949 QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1008
Query: 720 TEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
I ++KNLRVC DCH KF+SK++ R I+VRDA RFHHF+ G CSC DYW
Sbjct: 1009 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 164/580 (28%), Positives = 280/580 (48%), Gaps = 19/580 (3%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDF----GATRHARALFFSVRNPDIFLFNVLVKGF 77
++H+Q++ G S+ L++KLFDF G A +F + IF +N ++K
Sbjct: 106 KLHSQILKLGLDSNGC----LSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKEL 161
Query: 78 SVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGM----LLHAHAIVDGFGS 133
+ L+ + + N+ P+ T++ + A +HA + G
Sbjct: 162 ASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
+ VC+ L+DLY + V LAR+VFD + +D +W +I+GL +N ++I++F DM
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 194 ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIS 253
G+ +VL A +++ L +G + L K GF D YV LVSLY G++
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 254 TARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS 313
+A +F + + D + YN +I+G + G E +++LF+ + + G S+T+ L+ S
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 314 PFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNA 373
G L + Y K G SN+ + AL +Y++ +I+ A F E+ + V WN
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 374 MISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN 433
M+ Y + +F++M E PN T + L C +LG L G+ +H I N
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 434 LEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFK 493
+ N YV + LIDMYAK G + A + + K+ V+W T+I GY + + +AL F+
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 494 EMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRA 553
+ML GI V + + AC+ ++EG++I L +A +V + R
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA-LVTLYSRC 639
Query: 554 GQLEKA-LEFIRTMPVEPGPAV-WGTLLGACKIHKNTDIA 591
G++E++ L F +T E G + W L+ + N + A
Sbjct: 640 GKIEESYLAFEQT---EAGDNIAWNALVSGFQQSGNNEEA 676
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 201/447 (44%), Gaps = 4/447 (0%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLY-FKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
G LH+ + G SN + L D Y FK G A KVFDEMPER WN +I L
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG-AFKVFDEMPERTIFTWNKMIKELA 162
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAV-AELQELGVGMGIQCLAFKFGFHRDA 236
+ +F MV+ V + T VL A V I G
Sbjct: 163 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 222
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
V L+ LYS+ G + AR +F + D ++ AMISG + N +++LF ++ V
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
G + ++ L + + G +K G S++ V AL ++Y L + A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
+F ++ +N +I+G +Q G E A+ LF+ M P+ T+ + + AC+
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTII 476
G+L G+ +H N + AL+++YAKC +I A F +N V WN ++
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
YGL + ++F++M I P+ T+ SIL C G + GE+I H + K
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI-HSQIIKTNF 521
Query: 537 EPLAEHHACMVDILGRAGQLEKALEFI 563
+ A + ++D+ + G+L+ A + +
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 182/403 (45%), Gaps = 6/403 (1%)
Query: 183 DDSIQVFR-DMVAN-GVQVDSTTVVTVLPAVAELQ-ELGVGMGIQCLAFKFGFHRDAYVL 239
D+S Q R D V N G++ + T+ +L + L G + K G + +
Sbjct: 64 DESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLS 123
Query: 240 TGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR 299
L Y GD+ A +F + + + +N MI I LF ++
Sbjct: 124 EKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVT 183
Query: 300 VSSSTMVGLIPVSSPFG-HLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+ T G++ + I + G ++ V L +YSR +D+AR+
Sbjct: 184 PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARR 243
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
+FD K ++W AMISG ++N A+ LF +M P P ++ LSAC ++ S
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIES 303
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFG 478
L G+ +H L+ + YV AL+ +Y GN+ A +F +MS+++ VT+NT+I G
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 479 YGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEP 538
GYG +A++LFK M G+ P T S++ ACS G + G+++ H K
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFAS 422
Query: 539 LAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
+ ++++ + +E AL++ VE +W +L A
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 464
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/686 (36%), Positives = 380/686 (55%), Gaps = 52/686 (7%)
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVF-----RDMV 193
+ ++ Y + LARK+FDEMPERD V+WN +I G VRN + ++F RD+
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 194 A----------NGVQVDSTTVVTVLPAVAELQELGV--------GMGIQCLAFKFGFHRD 235
+ NG D+ +V +P ++ + M C+ FK R+
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK---SRE 215
Query: 236 AYVLTG---LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
+ L L+ + K I AR F + D++++N +I+GY +G+I+ + +LF E
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 293 LLVSGQRVSSSTMVGLI------PVSSPFGHLHLTCSIQGYCVKSGAIS----------- 335
V ++ + G I F + + + +G +
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 336 ------NSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALS 389
N S + T Y++ +I A+ LFD+ P++ +W AMI+GY+Q+G + AL
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 390 LFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYA 449
LF +M N + ++ LS CA + +L GK +H + E +V AL+ MY
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 450 KCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLS 509
KCG+I EA LF M+ K+ V+WNT+I GY HG+G AL+ F+ M G+ P T ++
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515
Query: 510 ILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVE 569
+L ACSH GLV +G + F+ M Y + P ++H+ACMVD+LGRAG LE A ++ MP E
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575
Query: 570 PGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIR 629
P A+WGTLLGA ++H NT++A A++++F ++P + G YVLLSN+Y+ + +R
Sbjct: 576 PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLR 635
Query: 630 EVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETV 689
+ + + K PG + IEI TH F GD H I+A LE+L +M++ GY ++T
Sbjct: 636 VRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTS 695
Query: 690 TSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKIT 749
LHDVEEEEKE MV HSE+LA+A+ ++ G IR+IKNLRVC DCH A K++++IT
Sbjct: 696 VVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARIT 755
Query: 750 ERVIVVRDANRFHHFKDGICSCGDYW 775
R+I++RD NRFHHFKDG CSCGDYW
Sbjct: 756 GRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 224/512 (43%), Gaps = 51/512 (9%)
Query: 55 ARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP 114
AR LF + D+ +NV++KG+ N + + L+ + R + + +
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 115 DDKYGML--------LHAHAIVDGFGSN-----------------LFVCSSLVDLYFKFS 149
DD + + +A++ + N L + L+ + K
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKK 233
Query: 150 RVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRD-----------MVANGVQ 198
++ AR+ FD M RD V+WNT+ITG ++ D++ Q+F + MV+ +Q
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 199 ----VDSTTVVTVLPAVAELQE--------LGVGMGIQCLAFKFGFHRDAYVLTGLVSLY 246
++ + +P E+ G M + F R+ +++ Y
Sbjct: 294 NRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGY 353
Query: 247 SKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMV 306
++CG IS A+ LF + K D +++ AMI+GY+ +G +++LF ++ G R++ S+
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 307 GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK 366
+ + L L + G VK G + V AL +Y + I+ A LF E K
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGK-WV 425
+ +WN MI+GY+++G E AL F+ M P+ T+ LSAC+ G + G+ +
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHGY 484
+ + + + PN ++D+ + G + +A L +M E + W T++ +HG
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 485 GHEALKLFKEMLHSGIHPSGV-TFLSILYACS 515
A ++ SG+ LS LYA S
Sbjct: 594 TELAETAADKIFAMEPENSGMYVLLSNLYASS 625
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 205/463 (44%), Gaps = 58/463 (12%)
Query: 145 YFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVF-----RDMVANGVQV 199
Y + R A +VF MP +V++N +I+G +RN ++ + ++F RD+V+ V +
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 200 DSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF 259
L EL F+ RD ++S Y++ G + AR +F
Sbjct: 134 KGYVRNRNLGKAREL-------------FEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 260 GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 319
+ + + +++NA++S Y N ++E + LF+ + +
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS-------------------RENWALVS 221
Query: 320 LTCSIQGYCVKSGAISNSSVSTALT-----------TIYSRLNEIDMARKLFDESPEKTV 368
C + G+ K + ++ T Y++ +ID AR+LFDESP + V
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV 281
Query: 369 AAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQL 428
W AM+SGY QN + E A LF +M N V+ L+ Q + K + +
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDV 337
Query: 429 IKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEA 488
+ + N+ +I YA+CG ISEA+ LFD M +++ V+W +I GY G+ EA
Sbjct: 338 MPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 489 LKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVD 548
L+LF +M G + +F S L C+ + G+++ H + K E ++
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL-HGRLVKGGYETGCFVGNALLL 452
Query: 549 ILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIA 591
+ + G +E+A + + M + W T++ H ++A
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKD-IVSWNTMIAGYSRHGFGEVA 494
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 161/381 (42%), Gaps = 61/381 (16%)
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
+S Y + G + A +F + + ++YN MISGY NGE E + KLF E+ VS
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM-PERDLVSW 129
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
+ M I+GY R + AR+LF+
Sbjct: 130 NVM------------------IKGYV--------------------RNRNLGKARELFEI 151
Query: 363 SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG 422
PE+ V +WN M+SGY QNG + A S+F M N V+ LSA Q +
Sbjct: 152 MPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEE- 206
Query: 423 KWVHQLIKSKNLEPNIYVS-TALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
L KS+ E VS L+ + K I EARQ FDSM+ ++ V+WNTII GY
Sbjct: 207 --ACMLFKSR--ENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQ 262
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAE 541
G EA +LF E + T+ +++ +V E E+F M + + A
Sbjct: 263 SGKIDEARQLFDESPVQDV----FTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNA- 317
Query: 542 HHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFEL 601
M+ + ++E A E MP + W T++ A+ +++ +
Sbjct: 318 ----MLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 602 DPGSVGYYVLLSNIYSVGRNF 622
DP V + +++ G +F
Sbjct: 373 DP--VSWAAMIAGYSQSGHSF 391
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 159/371 (42%), Gaps = 18/371 (4%)
Query: 35 DLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLR 94
D+ S + G AR LF D+F + +V G+ N + L+ +
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 95 LRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFG-SNLFVCSSLVDLYFKFSRVGL 153
R ++ + + + A + D N+ ++++ Y + ++
Sbjct: 309 ERNEVSWNAMLAGYVQGER-------MEMAKELFDVMPCRNVSTWNTMITGYAQCGKISE 361
Query: 154 ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAE 213
A+ +FD+MP+RD V+W +I G ++ + +++++F M G +++ ++ + L A+
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 214 LQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAM 273
+ L +G + K G+ +V L+ +Y KCG I A LF + D++++N M
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS-----PFGHLHLTCSIQGYC 328
I+GY+ +G E +++ F + G + +TMV ++ S G + Q Y
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDY- 540
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP-EKTVAAWNAMISGYTQNGLTETA 387
G + NS + + R ++ A L P E A W ++ +G TE A
Sbjct: 541 ---GVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
Query: 388 LSLFQEMMTTE 398
+ ++ E
Sbjct: 598 ETAADKIFAME 608
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/658 (37%), Positives = 374/658 (56%), Gaps = 2/658 (0%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G +H A+ G L V +SL+++Y K + G AR VFD M ERD ++WN+VI G+ +
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQE-LGVGMGIQCLAFKFGFHRDAY 237
N +++ +F ++ G++ D T+ +VL A + L E L + + A K D++
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 238 VLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG 297
V T L+ YS+ + A +LF DL+A+NAM++GYT + + ++KLF + G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 298 QRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMAR 357
+R T+ + ++ + Y +KSG + VS+ + +Y + ++ A+
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 358 KLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
FD P AW MISG +NG E A +F +M P+ TI T A + L
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIF 477
+L G+ +H N + +V T+L+DMYAKCG+I +A LF + N WN ++
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
G HG G E L+LFK+M GI P VTF+ +L ACSH+GLV E + M Y I+
Sbjct: 693 GLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASER 597
P EH++C+ D LGRAG +++A I +M +E +++ TLL AC++ +T+ + + +
Sbjct: 753 PEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATK 812
Query: 598 LFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVS 657
L EL+P YVLLSN+Y+ + + R + K K+ K PG + IE+ H+FV
Sbjct: 813 LLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVV 872
Query: 658 GDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFAL 717
DRS+ IY ++ + +++ GY ET +L DVEEEEKE + HSEKLA+AF L
Sbjct: 873 DDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGL 932
Query: 718 ITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
++T P T IR+IKNLRVC DCH A K+I+K+ R IV+RDANRFH FKDGICSCGDYW
Sbjct: 933 LSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 214/464 (46%), Gaps = 40/464 (8%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
H +A G + FV +LV++Y KF +V + +F+EMP RD V WN ++ + +
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
+++I + ++G+ + T ++ LA G DA G
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEIT-------------------LRLLARISGDDSDA----G 263
Query: 242 LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
V ++ D S+ ++I N +S Y +G+ + +K F +++ S
Sbjct: 264 QVKSFANGNDASSV---------SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECD 314
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
T + ++ + L L + +K G +VS +L +Y +L + AR +FD
Sbjct: 315 QVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD 374
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS-LS 420
E+ + +WN++I+G QNGL A+ LF +++ P+ T+T+ L A + L LS
Sbjct: 375 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 434
Query: 421 FGKWVH-QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGY 479
K VH IK N+ + +VSTALID Y++ + EA LF+ + + V WN ++ GY
Sbjct: 435 LSKQVHVHAIKINNVSDS-FVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGY 492
Query: 480 GLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIF-HDMVNKYRIEP 538
GH+ LKLF M G T ++ C + +G+++ + + + Y ++
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 539 LAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGAC 582
+ ++D+ + G + A ++PV P W T++ C
Sbjct: 553 WVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 183/411 (44%), Gaps = 43/411 (10%)
Query: 113 SPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTV 172
S D G HA + F+ ++L+ +Y K + AR+VFD+MP+RD V+WN++
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 173 ITGLVRN--CYYDDSIQ---VFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLA 227
+ ++ C ++ Q +FR + + V T+ +L + A
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 228 FKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSV 287
K G D +V LV++Y K G + ++LF + D++ +N M+ Y G E ++
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAI---SNSSVSTALT 344
L SG + T L L I G +G + +N + +++++
Sbjct: 232 DLSSAFHSSGLNPNEIT-------------LRLLARISGDDSDAGQVKSFANGNDASSVS 278
Query: 345 TIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
I R N +S Y +G L F +M+ ++ + V
Sbjct: 279 EIIFR----------------------NKGLSEYLHSGQYSALLKCFADMVESDVECDQV 316
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
T L+ ++ SL+ G+ VH + L+ + VS +LI+MY K AR +FD+M
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 465 SEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACS 515
SE++ ++WN++I G +G EA+ LF ++L G+ P T S+L A S
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 4/194 (2%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q+HA I +GY DL + + G A+ F S+ PD + ++ G N
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHAIVDGFGSNLFVC 138
+ +++ +RL + PD +T A AS + G +HA+A+ ++ FV
Sbjct: 598 EEERAFHVFSQMRL-MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+SLVD+Y K + A +F + + AWN ++ GL ++ +++Q+F+ M + G++
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 716
Query: 199 VDSTTVVTVLPAVA 212
D T + VL A +
Sbjct: 717 PDKVTFIGVLSACS 730
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFG 478
L GK H I + P ++ LI MY+KCG+++ AR++FD M +++ V+WN+I+
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 479 YGLHGYG-----HEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
Y +A LF+ + ++ S +T +L C H+G V E FH K
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FHGYACK 173
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
++ +V+I + G++++ MP +W +L A
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD-VVLWNLMLKA 220
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/691 (36%), Positives = 386/691 (55%), Gaps = 36/691 (5%)
Query: 121 LLHAHAIVDGFGSNLFVCSSLVD---LYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
++HA I G + + S L++ L F + A VF + E + + WNT+ G
Sbjct: 51 IIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHA 110
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAY 237
+ +++++ M++ G+ +S T VL + A+ + G I K G D Y
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY 170
Query: 238 VLTGLVSLYSKCGD-------------------------------ISTARLLFGMIGKPD 266
V T L+S+Y + G I A+ LF I D
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 230
Query: 267 LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQG 326
++++NAMISGY G + +++LF++++ + R STMV ++ + G + L +
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 327 YCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTET 386
+ G SN + AL +YS+ E++ A LF+ P K V +WN +I GYT L +
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350
Query: 387 ALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLI--KSKNLEPNIYVSTAL 444
AL LFQEM+ + TPN VT+ + L ACA LG++ G+W+H I + K + + T+L
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410
Query: 445 IDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSG 504
IDMYAKCG+I A Q+F+S+ K+ +WN +IFG+ +HG + LF M GI P
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 505 VTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIR 564
+TF+ +L ACSH+G++ G IF M Y++ P EH+ CM+D+LG +G ++A E I
Sbjct: 471 ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 530
Query: 565 TMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPK 624
M +EP +W +LL ACK+H N ++ +E L +++P + G YVLLSNIY+ + +
Sbjct: 531 MMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNE 590
Query: 625 AASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGY 684
A R + + + K PGC+ IEI+ H F+ GD+ H IY MLE++ + + G+
Sbjct: 591 VAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGF 650
Query: 685 QTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKF 744
+T L ++EEE KE + HSEKLAIAF LI+T+PGT++ I+KNLRVC +CH ATK
Sbjct: 651 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 710
Query: 745 ISKITERVIVVRDANRFHHFKDGICSCGDYW 775
ISKI +R I+ RD RFHHF+DG+CSC DYW
Sbjct: 711 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/580 (25%), Positives = 278/580 (47%), Gaps = 84/580 (14%)
Query: 2 IQRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLF---DFGATRHARAL 58
I+ + ++ ++ L L IHAQ+I G + +++KL + F +A ++
Sbjct: 31 IRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISV 90
Query: 59 FFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPD 115
F +++ P++ ++N + +G ++++ P S++ LY + + L P++YT+ F + A S
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 116 DKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSR------------------------- 150
K G +H H + G +L+V +SL+ +Y + R
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 151 ------VGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTV 204
+ A+K+FDE+P +D V+WN +I+G Y +++++F+DM+ V+ D +T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 205 VTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK 264
VTV+ A A+ + +G + GF + ++ L+ LYSKCG++ TA LF +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 265 PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSI 324
D+I++N +I GYT + ++ LF+E+L SG+ + TM+ ++P + G + + I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 325 QGYCVK--SGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNG 382
Y K G + SS+ T+L +Y++ +I+ A ++F+ K++++WNAMI G+ +G
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 383 LTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVST 442
+ + LF M P+ +T LSAC+ G L G
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG-------------------- 489
Query: 443 ALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFK----EMLHS 498
R +F +M++ +T +G + GH LFK +
Sbjct: 490 ---------------RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG--LFKEAEEMINMM 532
Query: 499 GIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEP 538
+ P GV + S+L AC G V GE +++ +IEP
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLI---KIEP 569
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/587 (41%), Positives = 360/587 (61%), Gaps = 8/587 (1%)
Query: 192 MVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGD 251
MV + + T V+ + + ++ + G+ + G H Y LVSL S
Sbjct: 14 MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFY----LVSLPSP-PP 68
Query: 252 ISTARLLFGMIGKP-DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ-RVSSSTMVGLI 309
+S A +F I KP ++ +N +I GY G S+ L+RE+ VSG + T LI
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 310 PVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVA 369
+ + L +I ++SG S V +L +Y+ ++ A K+FD+ PEK +
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 370 AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLI 429
AWN++I+G+ +NG E AL+L+ EM + P+ TI + LSACA++G+L+ GK VH +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 430 KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEAL 489
L N++ S L+D+YA+CG + EA+ LFD M +KN+V+W ++I G ++G+G EA+
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 490 KLFKEMLHS-GIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVD 548
+LFK M + G+ P +TF+ ILYACSH G+V+EG E F M +Y+IEP EH CMVD
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 549 ILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGY 608
+L RAGQ++KA E+I++MP++P +W TLLGAC +H ++D+A A ++ +L+P G
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 609 YVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAI 668
YVLLSN+Y+ + + IR+ + + K PG +L+E+ H F+ GD+SH + AI
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 669 YAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRI 728
YA L+++TG++R GY + DVEEEEKE V HSEK+AIAF LI+T + I +
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 729 IKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+KNLRVC DCH A K +SK+ R IVVRD +RFHHFK+G CSC DYW
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 211/455 (46%), Gaps = 45/455 (9%)
Query: 20 LAQIHAQLILNGYQSDLASITK----LTQKLFDFGATRHARALFFSVRNP-DIFLFNVLV 74
L QIHA I +G A + K L +A +F + P ++F++N L+
Sbjct: 33 LRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 75 KGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGMLLHAHAIVDGF 131
+G++ + S+ +LY +R+ + PD +TY F I A D + G +H+ I GF
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 132 GSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRD 191
GS ++V +SL+ LY V A KVFD+MPE+D VAWN+VI G N ++++ ++ +
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 192 MVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGD 251
M + G++ D T+V++L A A++ L +G + K G R+ + L+ LY++CG
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 252 ISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPV 311
+ A+ LF + + +++ ++I G NG + +++LF+ + + GL+P
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM---------ESTEGLLPC 323
Query: 312 SSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP-EKTVAA 370
F + CS G VK G + R++ +E E +
Sbjct: 324 EITFVGILYACSHCG-MVKEG--------------------FEYFRRMREEYKIEPRIEH 362
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIK 430
+ M+ + G + A + M PN V T L AC G ++ I+
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLLGACTVHGDSDLAEFAR--IQ 417
Query: 431 SKNLEPNIYVSTALI-DMYAKCGNISEARQLFDSM 464
LEPN L+ +MYA S+ +++ M
Sbjct: 418 ILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 461 bits (1186), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/785 (33%), Positives = 424/785 (54%), Gaps = 18/785 (2%)
Query: 9 TFINKACNLPH-----LAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR 63
+ + AC+L L QI + +G +DL + L G+ +AR +F +
Sbjct: 211 SLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 64 NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTY------AFTIAASPDDK 117
+ N L+ G + L+ + +++P++Y +++A K
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLK 330
Query: 118 YGMLLHAHAIVDGFGSNLF-VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
G +H H I G + + + LV++Y K + AR+VF M ++D+V+WN++ITGL
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+N + ++++ ++ M + + S T+++ L + A L+ +G I + K G +
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYT-CNGEIESSVKLFRELLV 295
V L++LY++ G ++ R +F + + D +++N++I + +V F
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 296 SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDM 355
+GQ+++ T ++ S L I G +K+ ++ AL Y + E+D
Sbjct: 511 AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDG 570
Query: 356 ARKLFDESPEK-TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
K+F E+ WN+MISGY N L AL L M+ T + T LSA A
Sbjct: 571 CEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFA 630
Query: 415 QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNT 474
+ +L G VH LE ++ V +AL+DMY+KCG + A + F++M +N+ +WN+
Sbjct: 631 SVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNS 690
Query: 475 IIFGYGLHGYGHEALKLFKEM-LHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
+I GY HG G EALKLF+ M L P VTF+ +L ACSHAGL+ EG + F M +
Sbjct: 691 MISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDS 750
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGAC--KIHKNTDIA 591
Y + P EH +CM D+LGRAG+L+K +FI MP++P +W T+LGAC + ++
Sbjct: 751 YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 810
Query: 592 RVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGT 651
+ A+E LF+L+P + YVLL N+Y+ G + R+ K + K G + + +
Sbjct: 811 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDG 870
Query: 652 THVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKL 711
H+FV+GD+SH A IY L++L KMR+ GY +T +L+D+E+E KE +++ HSEKL
Sbjct: 871 VHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKL 930
Query: 712 AIAFALITTEPGT-EIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICS 770
A+AF L T IRI+KNLRVC DCH+A K+ISKI R I++RD+NRFHHF+DG CS
Sbjct: 931 AVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACS 990
Query: 771 CGDYW 775
C D+W
Sbjct: 991 CSDFW 995
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 243/476 (51%), Gaps = 22/476 (4%)
Query: 121 LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNC 180
H+ + ++++C++L++ Y + ARKVFDEMP R+ V+W +++G RN
Sbjct: 22 FFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNG 81
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGV--GMGIQCLAFKFGFHRDAYV 238
+ +++ RDMV G+ + V+VL A E+ +G+ G I L FK + DA V
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 239 LTGLVSLYSKC-GDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG 297
L+S+Y KC G + A FG I + +++N++IS Y+ G+ S+ ++F + G
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 298 QRVSSSTMVGLI----PVSSPFGHL--HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLN 351
R + T L+ ++ P L + C+IQ KSG +++ V + L + +++
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ----KSGLLTDLFVGSGLVSAFAKSG 257
Query: 352 EIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT-EFTPNPVTITTT- 409
+ ARK+F++ + N ++ G + E A LF +M + + +P I +
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 410 ---LSACAQLGSLSFGKWVH-QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
S ++G L G+ VH +I + ++ + + L++MYAKCG+I++AR++F M+
Sbjct: 318 FPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 466 EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEE 525
+K++V+WN++I G +G EA++ +K M I P T +S L +C+ + G++
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 526 IFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
I H K I+ ++ + G L + + +MP E W +++GA
Sbjct: 437 I-HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 402 NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
N V ++ S G+ F H + L+ ++Y+ LI+ Y + G+ AR++F
Sbjct: 3 NCVPLSFVQSCVGHRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 462 DSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLV 520
D M +N V+W I+ GY +G EAL ++M+ GI + F+S+L AC G V
Sbjct: 60 DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/733 (34%), Positives = 393/733 (53%), Gaps = 56/733 (7%)
Query: 45 KLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNY 104
+L G AR F S++ I +N +V G+ N P + L+ + R ++ +
Sbjct: 26 RLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGL 85
Query: 105 TYAFTIAASPDDKYGMLLHAHAIVDGFGS-NLFVCSSLVDLYFKFSRVGLARKVFDEMPE 163
+ K M++ A + + N+ +++V Y + VG A +F MPE
Sbjct: 86 VSGYI-------KNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 164 RDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI 223
R+ V+W + GL+ + D + +++ DM+ V ST ++ L + E
Sbjct: 139 RNEVSWTVMFGGLIDDGRIDKARKLY-DMMPVKDVVASTNMIGGLCREGRVDEAR----- 192
Query: 224 QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEI 283
L F R+ T +++ Y + + AR LF ++ + +++ +M+ GYT +G I
Sbjct: 193 --LIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRI 250
Query: 284 ESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTAL 343
E + + F ++ + PV + C+ A+
Sbjct: 251 EDAEEFFE-------------VMPMKPV--------IACN------------------AM 271
Query: 344 TTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNP 403
+ + EI AR++FD ++ A W MI Y + G AL LF +M P+
Sbjct: 272 IVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 404 VTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDS 463
++ + LS CA L SL +G+ VH + + ++YV++ L+ MY KCG + +A+ +FD
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391
Query: 464 MSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREG 523
S K+ + WN+II GY HG G EALK+F EM SG P+ VT ++IL ACS+AG + EG
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Query: 524 EEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACK 583
EIF M +K+ + P EH++C VD+LGRAGQ++KA+E I +M ++P VWG LLGACK
Sbjct: 452 LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK 511
Query: 584 IHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGC 643
H D+A VA+++LFE +P + G YVLLS+I + + A +R+ + ++K PGC
Sbjct: 512 THSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGC 571
Query: 644 TLIEINGTTHVFVSGD-RSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKEL 702
+ IE+ H+F G ++H I MLEK G +RE GY + LHDV+EEEK
Sbjct: 572 SWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVD 631
Query: 703 MVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFH 762
++ HSE+LA+A+ L+ G IR++KNLRVC DCH A K ISK+TER I++RDANRFH
Sbjct: 632 SLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFH 691
Query: 763 HFKDGICSCGDYW 775
HF +G CSC DYW
Sbjct: 692 HFNNGECSCRDYW 704
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 185/413 (44%), Gaps = 30/413 (7%)
Query: 35 DLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLR 94
D+ + T + L G AR +F +R ++ + ++ G+ N + L+ +
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP 230
Query: 95 LRTNLAPDNYTYAFTIAASPDD--KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVG 152
+T ++ + +T++ +D ++ ++ ++ C++++ + + +
Sbjct: 231 EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVI--------ACNAMIVGFGEVGEIS 282
Query: 153 LARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVA 212
AR+VFD M +RD W +I R + +++ +F M GV+ +++++L A
Sbjct: 283 KARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
Query: 213 ELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNA 272
L L G + + F D YV + L+++Y KCG++ A+L+F D+I +N+
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402
Query: 273 MISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSI-----QGY 327
+ISGY +G E ++K+F E+ SG + T++ ++ S G L I +
Sbjct: 403 IISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKF 462
Query: 328 CVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE---SPEKTVAAWNAMISGYTQNGLT 384
CV + + + S + + R ++D A +L + P+ TV W A++ +
Sbjct: 463 CV-TPTVEHYSCTVDM---LGRAGQVDKAMELIESMTIKPDATV--WGALLGACKTHSRL 516
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPN 437
+ A +++ E P+ LS+ + S KW + KN+ N
Sbjct: 517 DLAEVAAKKLFENE--PDNAGTYVLLSSI----NASRSKWGDVAVVRKNMRTN 563
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 255/749 (34%), Positives = 413/749 (55%), Gaps = 26/749 (3%)
Query: 42 LTQKLFDFGATR---HARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTN 98
LT+ L F +R A LF + D FL+NV++KGF+ ++ Y+ + +
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAG 125
Query: 99 LAPDNYTYAFTI---AASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLAR 155
+ D +TY F I A + G +HA I GF S+++VC+SL+ LY K A
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 156 KVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQ 215
KVF+EMPERD V+WN++I+G + S+ +F++M+ G + D + ++ L A + +
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 216 ELGVGMGIQCLAFKFGFHR-DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMI 274
+G I C A + D V+T ++ +YSK G++S A +F + + +++A+N MI
Sbjct: 246 SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305
Query: 275 SGYTCNGEIESSVKLFRELL-VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
Y NG + + F+++ +G + T + L+P S+ +I GY ++ G
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGR----TIHGYAMRRGF 361
Query: 334 ISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQE 393
+ + + TAL +Y ++ A +FD EK V +WN++I+ Y QNG +AL LFQE
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE 421
Query: 394 MMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGN 453
+ + P+ TI + L A A+ SLS G+ +H I N + +L+ MYA CG+
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 454 ISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYA 513
+ +AR+ F+ + K+ V+WN+II Y +HG+G ++ LF EM+ S ++P+ TF S+L A
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541
Query: 514 CSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA 573
CS +G+V EG E F M +Y I+P EH+ CM+D++GR G A F+ MP P
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTAR 601
Query: 574 VWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAK 633
+WG+LL A + HK+ IA A+E++F+++ + G YVLL N+Y+ + I+ + +
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661
Query: 634 KRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLH 693
+ +++T + +E G +HVF +GDRSH IY +L+ ++ R +G E +H
Sbjct: 662 SKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS---RMVG---EEDIYVH 715
Query: 694 DVEEEEKELMVNV-------HSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFIS 746
V E +V HS +LA F LI+TE G + + N R+C CH + S
Sbjct: 716 CVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKAS 775
Query: 747 KITERVIVVRDANRFHHFKDGICSCGDYW 775
++T R IVV D+ FHHF +G CSCG+YW
Sbjct: 776 RLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 233/466 (50%), Gaps = 15/466 (3%)
Query: 7 IITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPD 66
+I + +L +IHA +I G+ SD+ L G A +F + D
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 67 IFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA-----SPDDKYGML 121
I +N ++ G+ SS+ L+ + L+ PD ++ + A SP K G
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALGACSHVYSP--KMGKE 252
Query: 122 LHAHAIVDGFGS-NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNC 180
+H HA+ + ++ V +S++D+Y K+ V A ++F+ M +R+ VAWN +I RN
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 181 YYDDSIQVFRDMV-ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVL 239
D+ F+ M NG+Q D T + +LPA A L+ G I A + GF +
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLE 368
Query: 240 TGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR 299
T L+ +Y +CG + +A ++F + + ++I++N++I+ Y NG+ S+++LF+EL S
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 300 VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKL 359
S+T+ ++P + L I Y VKS SN+ + +L +Y+ +++ ARK
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 360 FDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSL 419
F+ K V +WN++I Y +G ++ LF EM+ + PN T + L+AC+ G +
Sbjct: 489 FNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548
Query: 420 SFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
G ++ + + ++P I ++D+ + GN S A++ + M
Sbjct: 549 DEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust.
Identities = 262/771 (33%), Positives = 416/771 (53%), Gaps = 22/771 (2%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR---NPDIFLFNVLVKGFSV 79
+HA+LI + D L G + A +F ++R D+ ++ ++ +
Sbjct: 84 VHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGN 143
Query: 80 NASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLLHAHAIVDG-FGSNL 135
N +I ++ L L P++Y Y I A + + G + + G F S++
Sbjct: 144 NGRELDAIKVFVEF-LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 136 FVCSSLVDLYFK-FSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
V SL+D++ K + A KVFD+M E + V W +IT ++ + ++I+ F DMV
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL 262
Query: 195 NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKC---GD 251
+G + D T+ +V A AEL+ L +G + A + G D V LV +Y+KC G
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGS 320
Query: 252 ISTARLLFGMIGKPDLIAYNAMISGY--TCNGEIESSVKLFRELLVSGQ-RVSSSTMVGL 308
+ R +F + ++++ A+I+GY CN E+ + LF E++ G + T
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA-INLFSEMITQGHVEPNHFTFSSA 379
Query: 309 IPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTV 368
+ + G K G SNSSV+ ++ +++ + + ++ A++ F+ EK +
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
Query: 369 AAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQL 428
++N + G +N E A L E+ E + T + LS A +GS+ G+ +H
Sbjct: 440 VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 429 IKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEA 488
+ L N V ALI MY+KCG+I A ++F+ M +N ++W ++I G+ HG+
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRV 559
Query: 489 LKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVD 548
L+ F +M+ G+ P+ VT+++IL ACSH GLV EG F+ M ++I+P EH+ACMVD
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVD 619
Query: 549 ILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGY 608
+L RAG L A EFI TMP + VW T LGAC++H NT++ ++A+ ++ ELDP
Sbjct: 620 LLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAA 679
Query: 609 YVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAI 668
Y+ LSNIY+ + ++ +R K+R L K GC+ IE+ H F GD +H +A I
Sbjct: 680 YIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQI 739
Query: 669 YAMLEKLTGKMREIGYQTETVTSLHDVEEEEKEL----MVNVHSEKLAIAFALITTEPGT 724
Y L++L +++ GY +T LH +EEE E ++ HSEK+A+AF LI+T
Sbjct: 740 YDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSR 799
Query: 725 EIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+R+ KNLRVC DCH A K+IS ++ R IV+RD NRFHHFKDG CSC DYW
Sbjct: 800 PVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 218/453 (48%), Gaps = 16/453 (3%)
Query: 93 LRLRTNLAP-DNYTYAFTIAA---SPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKF 148
L R + P D+ T++ + + + D + G L+HA I + + +SL+ LY K
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 149 SRVGLARKVFDEMP---ERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVV 205
A VF+ M +RD V+W+ ++ N D+I+VF + + G+ +
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 206 TVLPAVAELQELGVGMGIQCLAFKFG-FHRDAYVLTGLVSLYSKCGD-ISTARLLFGMIG 263
V+ A + +GVG K G F D V L+ ++ K + A +F +
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 264 KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCS 323
+ +++ + MI+ G +++ F ++++SG T+ + + +L L
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
Query: 324 IQGYCVKSGAISNSSVSTALTTIYSRLN---EIDMARKLFDESPEKTVAAWNAMISGYTQ 380
+ + ++SG + + V +L +Y++ + +D RK+FD + +V +W A+I+GY +
Sbjct: 291 LHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 381 N-GLTETALSLFQEMMTT-EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
N L A++LF EM+T PN T ++ AC L GK V + L N
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS 498
V+ ++I M+ K + +A++ F+S+SEKN V++NT + G + +A KL E+
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 499 GIHPSGVTFLSILYACSHAGLVREGEEIFHDMV 531
+ S TF S+L ++ G +R+GE+I +V
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/651 (37%), Positives = 381/651 (58%), Gaps = 11/651 (1%)
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
N+F + +V Y K S++ +AR++FDE+P+ DTV++NT+I+G ++ +F+ M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 194 ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIS 253
G +VD T+ ++ A + +L + C + GF + V V+ YSK G +
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 254 TA-RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS 312
A + +GM D +++N+MI Y + E ++ L++E++ G ++ T+ ++
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 313 SPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDM---ARKLFDESPEKTVA 369
+ HL G +K+G NS V + L YS+ D + K+F E +
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 370 AWNAMISGYTQNG-LTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQL 428
WN MISGY+ N L+E A+ F++M P+ + SAC+ L S S K +H L
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 429 -IKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHE 487
IKS I V+ ALI +Y K GN+ +AR +FD M E N V++N +I GY HG+G E
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 488 ALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMV 547
AL L++ ML SGI P+ +TF+++L AC+H G V EG+E F+ M ++IEP AEH++CM+
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490
Query: 548 DILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVG 607
D+LGRAG+LE+A FI MP +PG W LLGAC+ HKN +A A+ L + P +
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAAT 550
Query: 608 YYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATA 667
YV+L+N+Y+ R + + AS+R+ + +++ K PGC+ IE+ HVFV+ D SH
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIRE 610
Query: 668 IYAMLEKLTGKMREIGY---QTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGT 724
+ LE++ KM+++GY + + + E ++E+ + HSEKLA+AF L++T G
Sbjct: 611 VNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGE 670
Query: 725 EIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
E+ ++KNLR+C DCH A KF+S + R I+VRD RFH FKDG CSCGDYW
Sbjct: 671 ELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 235/488 (48%), Gaps = 45/488 (9%)
Query: 33 QSDLASITKLTQKLFDF----GATRHARALFFSVRNPDIFLFNVLVKGFSVNAS------ 82
+S +AS T L+ + G +ARA F+S P++F +NV+VK ++ ++
Sbjct: 36 KSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQ 95
Query: 83 -----PSSSIALYTHL------------------RLRT-NLAPDNYTYAFTIAASPDDKY 118
P Y L R+R D +T + IAA D+
Sbjct: 96 LFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACC-DRV 154
Query: 119 GML--LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPE-RDTVAWNTVITG 175
++ LH ++ GF S V ++ V Y K + A VF M E RD V+WN++I
Sbjct: 155 DLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVA 214
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
++ ++ ++++M+ G ++D T+ +VL A+ L L G K GFH++
Sbjct: 215 YGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN 274
Query: 236 AYVLTGLVSLYSKCG---DISTARLLFGMIGKPDLIAYNAMISGYTCNGEI-ESSVKLFR 291
++V +GL+ YSKCG + + +F I PDL+ +N MISGY+ N E+ E +VK FR
Sbjct: 275 SHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFR 334
Query: 292 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNS-SVSTALTTIYSRL 350
++ G R + V + S I G +KS SN SV+ AL ++Y +
Sbjct: 335 QMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKS 394
Query: 351 NEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
+ AR +FD PE ++N MI GY Q+G AL L+Q M+ + PN +T L
Sbjct: 395 GNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVL 454
Query: 411 SACAQLGSLSFGK-WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-N 468
SACA G + G+ + + + ++ +EP + +ID+ + G + EA + D+M K
Sbjct: 455 SACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPG 514
Query: 469 TVTWNTII 476
+V W ++
Sbjct: 515 SVAWAALL 522
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 204/454 (44%), Gaps = 46/454 (10%)
Query: 207 VLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIS------------- 253
+L +VAE ++L G + L K Y+ V+LYSKCG +S
Sbjct: 15 LLKSVAE-RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 254 ------------------TARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
AR LF I +PD ++YN +ISGY E +++ LF+ +
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 296 SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDM 355
G V T+ GLI + L + + V G S SSV+ A T YS+ +
Sbjct: 134 LGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 356 ARKLFDESPE-KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
A +F E + +WN+MI Y Q+ AL+L++EM+ F + T+ + L+A
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 415 QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCG---NISEARQLFDSMSEKNTVT 471
L L G+ H + N +V + LID Y+KCG + ++ ++F + + V
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 472 WNTIIFGYGLH-GYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
WNT+I GY ++ EA+K F++M G P +F+ + ACS+ + ++I H +
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI-HGL 370
Query: 531 VNKYRIEP--LAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNT 588
K I ++ ++A ++ + ++G L+ A MP E + ++ H +
Sbjct: 371 AIKSHIPSNRISVNNA-LISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHG 428
Query: 589 DIARVASERLFE--LDPGSVGYYVLLSNIYSVGR 620
A + +R+ + + P + + +LS G+
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK 462
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 139/308 (45%), Gaps = 24/308 (7%)
Query: 6 SIITFINKACNLPHL---AQIHAQLILNGYQSDLASITKLTQKLFDF-------GATRHA 55
++ + +N +L HL Q H +LI G+ + + + L DF +
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN----SHVGSGLIDFYSKCGGCDGMYDS 297
Query: 56 RALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA--- 112
+F + +PD+ ++N ++ G+S+N S R PD+ ++ +A
Sbjct: 298 EKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Query: 113 --SPDDKYGMLLHAHAIVDGFGSN-LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAW 169
SP +H AI SN + V ++L+ LY+K + AR VFD MPE + V++
Sbjct: 358 LSSPSQ--CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 170 NTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG-IQCLAF 228
N +I G ++ + +++ +++ M+ +G+ + T V VL A A ++ G +
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 229 KFGFHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIGKPDLIAYNAMISGYTCNGEIESSV 287
F +A + ++ L + G + A R + M KP +A+ A++ + + +
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAE 535
Query: 288 KLFRELLV 295
+ EL+V
Sbjct: 536 RAANELMV 543
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 454 bits (1169), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/576 (39%), Positives = 345/576 (59%), Gaps = 11/576 (1%)
Query: 204 VVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIG 263
+V P V +LQ++ + + G+ R +LT L++L I+ LLF +
Sbjct: 15 IVRAGPRVKQLQQVHAHLIVT------GYGRSRSLLTKLITLACSARAIAYTHLLFLSVP 68
Query: 264 KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCS 323
PD +N++I + V +R +L S S+ T +I + L +
Sbjct: 69 LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 324 IQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGL 383
+ + V SG ++ V AL T YS+ +++ AR++FD PEK++ AWN+++SG+ QNGL
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 384 TETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTA 443
+ A+ +F +M + F P+ T + LSACAQ G++S G WVHQ I S+ L+ N+ + TA
Sbjct: 189 ADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTA 248
Query: 444 LIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS-GIHP 502
LI++Y++CG++ +AR++FD M E N W +I YG HGYG +A++LF +M G P
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIP 308
Query: 503 SGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEF 562
+ VTF+++L AC+HAGLV EG ++ M YR+ P EHH CMVD+LGRAG L++A +F
Sbjct: 309 NNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKF 368
Query: 563 IRTMPV---EPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVG 619
I + PA+W +LGACK+H+N D+ ++RL L+P + G++V+LSNIY++
Sbjct: 369 IHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS 428
Query: 620 RNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKM 679
+ + IR+ + L K G ++IE+ T++F GD SH IY LE L +
Sbjct: 429 GKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRC 488
Query: 680 REIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCH 739
+EIGY + +H VEEEEKE + HSEKLA+AF L+ T I I+KNLR+C DCH
Sbjct: 489 KEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCH 547
Query: 740 TATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+A K+IS ++ R I VRD RFHHF++G CSC DYW
Sbjct: 548 SAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 210/428 (49%), Gaps = 7/428 (1%)
Query: 95 LRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLA 154
+ T +A ++ Y + A P K +HAH IV G+G + + + L+ L +
Sbjct: 1 MTTKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYT 60
Query: 155 RKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAEL 214
+F +P D +N+VI + + +R M+++ V + T +V+ + A+L
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADL 120
Query: 215 QELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMI 274
L +G G+ C A GF D YV LV+ YSKCGD+ AR +F + + ++A+N+++
Sbjct: 121 SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLV 180
Query: 275 SGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAI 334
SG+ NG + ++++F ++ SG S+T V L+ + G + L + Y + G
Sbjct: 181 SGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLD 240
Query: 335 SNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEM 394
N + TAL +YSR ++ AR++FD+ E VAAW AMIS Y +G + A+ LF +M
Sbjct: 241 LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 395 M-TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ-LIKSKNLEPNIYVSTALIDMYAKCG 452
PN VT LSACA G + G+ V++ + KS L P + ++DM + G
Sbjct: 301 EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAG 360
Query: 453 NISEARQLFDSMSEKNTVT----WNTIIFGYGLHGYGHEALKLFKEMLH-SGIHPSGVTF 507
+ EA + + T W ++ +H +++ K ++ +P
Sbjct: 361 FLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVM 420
Query: 508 LSILYACS 515
LS +YA S
Sbjct: 421 LSNIYALS 428
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 212/456 (46%), Gaps = 36/456 (7%)
Query: 17 LPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKG 76
+ L Q+HA LI+ GY + +TKL A + LF SV PD FLFN ++K
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 77 FSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPD---DKYGMLLHAHAIVDGFGS 133
S P +A Y + L +N++P NYT+ I + D + G +H HA+V GFG
Sbjct: 82 TSKLRLPLHCVAYYRRM-LSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL 140
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
+ +V ++LV Y K + AR+VFD MPE+ VAWN++++G +N D++IQVF M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 194 ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIS 253
+G + DS T V++L A A+ + +G + G + + T L++LYS+CGD+
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 254 TARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS 313
AR +F + + ++ A+ AMIS Y +G + +V+LF ++ G IP +
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM---------EDDCGPIPNNV 311
Query: 314 PFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNA 373
F ++ C +G + ++Y R+ K + P V
Sbjct: 312 TF------VAVLSACAHAGLVEEGR------SVYKRMT------KSYRLIP--GVEHHVC 351
Query: 374 MISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSK 432
M+ + G + A ++ T P T L AC + G + +LI +
Sbjct: 352 MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALE 411
Query: 433 NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKN 468
P +V L ++YA G E + D M N
Sbjct: 412 PDNPGHHV--MLSNIYALSGKTDEVSHIRDGMMRNN 445
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/655 (36%), Positives = 361/655 (55%), Gaps = 5/655 (0%)
Query: 121 LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNC 180
L++ H D F NL + +L K+S + +F + +N++I G V N
Sbjct: 36 LINHHLHHDTFLVNLLLKRTLFFRQTKYSYL-----LFSHTQFPNIFLYNSLINGFVNNH 90
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLT 240
+ +++ +F + +G+ + T VL A +G+ + L K GF+ D +T
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 241 GLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRV 300
L+S+YS G ++ A LF I ++ + A+ SGYT +G ++ LF++++ G +
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 301 SSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF 360
S +V ++ G L I Y + NS V T L +Y++ +++ AR +F
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF 270
Query: 361 DESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLS 420
D EK + W+ MI GY N + + LF +M+ P+ +I LS+CA LG+L
Sbjct: 271 DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALD 330
Query: 421 FGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYG 480
G+W LI N++++ ALIDMYAKCG ++ ++F M EK+ V N I G
Sbjct: 331 LGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLA 390
Query: 481 LHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLA 540
+G+ + +F + GI P G TFL +L C HAGL+++G F+ + Y ++
Sbjct: 391 KNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTV 450
Query: 541 EHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFE 600
EH+ CMVD+ GRAG L+ A I MP+ P VWG LL C++ K+T +A + L
Sbjct: 451 EHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIA 510
Query: 601 LDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDR 660
L+P + G YV LSNIYSVG + +AA +R++ K+ + K PG + IE+ G H F++ D+
Sbjct: 511 LEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDK 570
Query: 661 SHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITT 720
SH + IYA LE L +MR +G+ T DVEEEEKE ++ HSEKLA+A LI+T
Sbjct: 571 SHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLIST 630
Query: 721 EPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+ G IR++KNLRVC DCH K ISKIT R IVVRD NRFH F +G CSC DYW
Sbjct: 631 DHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 257/535 (48%), Gaps = 10/535 (1%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
I T I+ AC + HL QIH LI + D + L ++ F T+++ LF +
Sbjct: 14 QQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQF 73
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGML 121
P+IFL+N L+ GF N ++ L+ +R + L +T+ + A + K G+
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIR-KHGLYLHGFTFPLVLKACTRASSRKLGID 132
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
LH+ + GF ++ +SL+ +Y R+ A K+FDE+P+R V W + +G +
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
+ ++I +F+ MV GV+ DS +V VL A + +L G I + ++++V T
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 242 LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
LV+LY+KCG + AR +F + + D++ ++ MI GY N + ++LF ++L +
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
++VG + + G L L + ++N ++ AL +Y++ + ++F
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
E EK + NA ISG +NG + + ++F + +P+ T L C G +
Sbjct: 373 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 432
Query: 422 G-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGY 479
G ++ + + L+ + ++D++ + G + +A +L M + N + W ++ G
Sbjct: 433 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492
Query: 480 GLHGYGHEALKLFKEMLHSGIHP-SGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
L A + KE++ + P + ++ + S G E E+ DM+NK
Sbjct: 493 RLVKDTQLAETVLKELI--ALEPWNAGNYVQLSNIYSVGGRWDEAAEV-RDMMNK 544
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/736 (34%), Positives = 397/736 (53%), Gaps = 63/736 (8%)
Query: 46 LFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYT 105
L G AR LF S + I +N +V G+ N P + L+ + PD
Sbjct: 27 LSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM-------PDRNI 79
Query: 106 YAFTIAASPDDKYGMLLHAHAIVDGFGS-NLFVCSSLVDLYFKFSRVGLARKVFDEMPER 164
++ S K G + A + D N+ ++LV Y +V +A +F +MPE+
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 165 DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPA---VAELQELGVGM 221
+ V+W ++ G +++ DD+ +++ +M+ + + T+++ L V E +E+
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLY-EMIPDKDNIARTSMIHGLCKEGRVDEAREI---- 194
Query: 222 GIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNG 281
F R T +V+ Y + + AR +F ++ + +++ +M+ GY NG
Sbjct: 195 ------FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNG 248
Query: 282 EIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVST 341
IE + +LF + V PV + C+
Sbjct: 249 RIEDAEELFEVMPVK-------------PV--------IACN------------------ 269
Query: 342 ALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTP 401
A+ + + EI AR++FD E+ A+W +I + +NG AL LF M P
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 402 NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
T+ + LS CA L SL GK VH + + ++YV++ L+ MY KCG + +++ +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 462 DSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG-IHPSGVTFLSILYACSHAGLV 520
D K+ + WN+II GY HG G EALK+F EM SG P+ VTF++ L ACS+AG+V
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMV 449
Query: 521 REGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLG 580
EG +I+ M + + ++P+ H+ACMVD+LGRAG+ +A+E I +M VEP AVWG+LLG
Sbjct: 450 EEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLG 509
Query: 581 ACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKT 640
AC+ H D+A +++L E++P + G Y+LLSN+Y+ + A +R++ K R + K+
Sbjct: 510 ACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKS 569
Query: 641 PGCTLIEINGTTHVFVSGD-RSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEE 699
PGC+ E+ H F G SH +I +L++L G +RE GY + +LHDV+EEE
Sbjct: 570 PGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEE 629
Query: 700 KELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDAN 759
K + HSE+LA+A+AL+ G IR++KNLRVC DCHTA K ISK+ ER I++RDAN
Sbjct: 630 KVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDAN 689
Query: 760 RFHHFKDGICSCGDYW 775
RFHHF++G CSC DYW
Sbjct: 690 RFHHFRNGECSCKDYW 705
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 115/254 (45%), Gaps = 11/254 (4%)
Query: 37 ASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLR 96
A I+ L QK G AR +F S++ + + ++K N ++ L+ L +
Sbjct: 270 AMISGLGQK----GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI-LMQK 324
Query: 97 TNLAPDNYTYA--FTIAAS-PDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGL 153
+ P T ++ AS +G +HA + F +++V S L+ +Y K +
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 154 ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG-VQVDSTTVVTVLPAVA 212
++ +FD P +D + WN++I+G + +++++VF +M +G + + T V L A +
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 213 ELQELGVGMGI-QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIGKPDLIAY 270
+ G+ I + + FG +V + + G + A ++ M +PD +
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 271 NAMISGYTCNGEIE 284
+++ + +++
Sbjct: 505 GSLLGACRTHSQLD 518
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/660 (35%), Positives = 370/660 (56%), Gaps = 38/660 (5%)
Query: 154 ARKVFDEMPER-DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVA 212
A VF +P +++ +N + L R+ +I ++ + G ++D + + +L AV+
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 213 ELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNA 272
++ L GM + +AFK D +V TG + +Y+ CG I+ AR +F + D++ +N
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 273 MISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG 332
MI Y G ++ + KLF E+ S + ++ G++ +I + +++
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 333 -------------------------------AISNSSVSTALTTIYSRLNEIDMARKLFD 361
++ N VSTA+ + YS+ +D A+ +FD
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
++ +K + W MIS Y ++ + AL +F+EM + P+ V++ + +SACA LG L
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
KWVH I LE + ++ ALI+MYAKCG + R +F+ M +N V+W+++I +
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAE 541
HG +AL LF M + P+ VTF+ +LY CSH+GLV EG++IF M ++Y I P E
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482
Query: 542 HHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFEL 601
H+ CMVD+ GRA L +ALE I +MPV +WG+L+ AC+IH ++ + A++R+ EL
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL 542
Query: 602 DPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRS 661
+P G VL+SNIY+ + + +IR V +++ + K G + I+ NG +H F+ GD+
Sbjct: 543 EPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKR 602
Query: 662 HSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTE 721
H + IYA L+++ K++ GY + + L DVEEEEK+ +V HSEKLA+ F L+ E
Sbjct: 603 HKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEE 662
Query: 722 PGTE------IRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
E IRI+KNLRVC DCH K +SK+ ER I+VRD RFH +K+G+CSC DYW
Sbjct: 663 KEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 182 bits (463), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 148/599 (24%), Positives = 259/599 (43%), Gaps = 54/599 (9%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
N+I+ ++ +L H+ Q+HA ++ L S +A +F S+ +
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPS 72
Query: 65 P-DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK---YGM 120
P + +FN ++ S ++ P ++I Y +R D +++ + A GM
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQRIR-HVGGRLDQFSFLPILKAVSKVSALFEGM 131
Query: 121 LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNC 180
LH A + FV + +D+Y R+ AR VFDEM RD V WNT+I R
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAE-------------LQELGVGM------ 221
D++ ++F +M + V D + ++ A L E V M
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 222 -------GIQCLAFKFGFH-----RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIA 269
G C+ F R+ +V T +VS YSKCG + A+++F K DL+
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 270 YNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCV 329
+ MIS Y + + ++++F E+ SG + +M +I + G L +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 330 KSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALS 389
+G S S++ AL +Y++ +D R +F++ P + V +W++MI+ + +G ALS
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 431
Query: 390 LFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH-QLIKSKNLEPNIYVSTALIDMY 448
LF M PN VT L C+ G + GK + + N+ P + ++D++
Sbjct: 432 LFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLF 491
Query: 449 AKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHG---YGHEALKLFKEMLHSGIHPSG 504
+ + EA ++ +SM N V W +++ +HG G A K E+ H
Sbjct: 492 GRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL--EPDHDGA 549
Query: 505 VTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFI 563
+ +S +YA E+ + D+ N R+ + E + L R Q K+ EF+
Sbjct: 550 LVLMSNIYA---------REQRWEDVRNIRRV--MEEKNVFKEKGLSRIDQNGKSHEFL 597
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 261/730 (35%), Positives = 393/730 (53%), Gaps = 75/730 (10%)
Query: 117 KYGMLLHAHAIVDGFG-SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITG 175
K G LHA + D F ++++ Y K + + FD++P+RD+V+W T+I G
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
Y +I+V DMV G++ T+ VL +VA + + G + K G +
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 236 AYVLTGLVSLYSKCGDISTARLLFG-------------------------------MIGK 264
V L+++Y+KCGD A+ +F + +
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 265 PDLIAYNAMISGYTCNG----EIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHL 320
D++ +N+MISG+ G ++ K+ R+ L+S R T+ ++ + L +
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF---TLASVLSACANLEKLCI 297
Query: 321 TCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDES----------------- 363
I + V +G + V AL ++YSR ++ AR+L ++
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 364 ----------------PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTIT 407
++ V AW AMI GY Q+G A++LF+ M+ PN T+
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 408 TTLSACAQLGSLSFGKWVH-QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS- 465
LS + L SLS GK +H +KS + ++ VS ALI MYAK GNI+ A + FD +
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIY-SVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 466 EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEE 525
E++TV+W ++I HG+ EAL+LF+ ML G+ P +T++ + AC+HAGLV +G +
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 526 IFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH 585
F M + +I P H+ACMVD+ GRAG L++A EFI MP+EP WG+LL AC++H
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Query: 586 KNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTL 645
KN D+ +VA+ERL L+P + G Y L+N+YS + +AA IR+ K ++ K G +
Sbjct: 597 KNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSW 656
Query: 646 IEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVN 705
IE+ HVF D +H IY ++K+ +++++GY +T + LHD+EEE KE ++
Sbjct: 657 IEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILR 716
Query: 706 VHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFK 765
HSEKLAIAF LI+T T +RI+KNLRVC DCHTA KFISK+ R I+VRD RFHHFK
Sbjct: 717 HHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFK 776
Query: 766 DGICSCGDYW 775
DG CSC DYW
Sbjct: 777 DGFCSCRDYW 786
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 131/586 (22%), Positives = 244/586 (41%), Gaps = 97/586 (16%)
Query: 5 NSIITFINKACNLPHLAQ-IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR 63
NS++ K C P +A+ + ++++ D++S + G A A F +
Sbjct: 185 NSLLNMYAK-CGDPMMAKFVFDRMVVR----DISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 64 NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK---YGM 120
DI +N ++ GF+ ++ +++ + + L+PD +T A ++A + + G
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 121 LLHAHAIVDGFGSNLFVCSSLV---------------------------------DLYFK 147
+H+H + GF + V ++L+ D Y K
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 148 FSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTV 207
+ A+ +F + +RD VAW +I G ++ Y ++I +FR MV G + +S T+ +
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 208 LPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIG-KPD 266
L + L L G I A K G V L+++Y+K G+I++A F +I + D
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD 479
Query: 267 LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQG 326
+++ +MI +G E +++LF +L+ G R T VG+
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA--------------- 524
Query: 327 YCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTET 386
C +G ++ DM + + P T++ + M+ + + GL +
Sbjct: 525 -CTHAGLVNQGR------------QYFDMMKDVDKIIP--TLSHYACMVDLFGRAGLLQE 569
Query: 387 ALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP-NIYVSTALI 445
A ++M P+ VT + LSAC ++ GK + + LEP N +AL
Sbjct: 570 AQEFIEKM---PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL--LEPENSGAYSALA 624
Query: 446 DMYAKCGNISEARQLFDSMSE---KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHP 502
++Y+ CG EA ++ SM + K ++ I + +H +G E G HP
Sbjct: 625 NLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVE----------DGTHP 674
Query: 503 SG----VTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHA 544
+T I G V + + HD+ + + E + HH+
Sbjct: 675 EKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVK-EQILRHHS 719
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/723 (33%), Positives = 384/723 (53%), Gaps = 70/723 (9%)
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
HA + G ++ ++ + L+ Y ++ A V +P+ +++++I L + +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
SI VF M ++G+ DS + + AEL VG I C++ G DA+V +
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG----- 297
+Y +CG + AR +F + D++ +A++ Y G +E V++ E+ SG
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 298 -----------------------QRV-------SSSTMVGLIPVSSPFGHLHLTCSIQGY 327
Q++ T+ ++P L++ I GY
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 328 CVKSGAISNSSVSTALTTIY-------------------------------SRLNEIDMA 356
+K G + + V +A+ +Y SR +D A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 357 RKLFDESPEKT----VAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
++F+ E+T V +W ++I+G QNG AL LF+EM PN VTI + L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 413 CAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTW 472
C + +L G+ H +L N++V +ALIDMYAKCG I+ ++ +F+ M KN V W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVN 532
N+++ G+ +HG E + +F+ ++ + + P ++F S+L AC GL EG + F M
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 533 KYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIAR 592
+Y I+P EH++CMV++LGRAG+L++A + I+ MP EP VWG LL +C++ N D+A
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Query: 593 VASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTT 652
+A+E+LF L+P + G YVLLSNIY+ + + SIR + L K PGC+ I++
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRV 637
Query: 653 HVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLA 712
+ ++GD+SH I +++++ +MR+ G++ +LHDVEE+E+E M+ HSEKLA
Sbjct: 638 YTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLA 697
Query: 713 IAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCG 772
+ F L+ T GT +++IKNLR+C DCH KFIS R I +RD NRFHHFKDGICSCG
Sbjct: 698 VVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCG 757
Query: 773 DYW 775
D+W
Sbjct: 758 DFW 760
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/588 (39%), Positives = 332/588 (56%), Gaps = 35/588 (5%)
Query: 223 IQCLAFKFGFHRDAYVLTGLVS--LYSKCGD-ISTARLLFGMIGKPDLIAYNAMISGYTC 279
I K G +D+Y +T +S + S D + A+++F +PD +N MI G++C
Sbjct: 33 IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSC 92
Query: 280 NGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSV 339
+ E E S+ L++ +L S ++ T L+ S T I K G ++
Sbjct: 93 SDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYA 152
Query: 340 STALTTIYSRLNEIDMARKLFDESPE-------------------------------KTV 368
+L Y+ +A LFD PE K
Sbjct: 153 VNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNA 212
Query: 369 AAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQL 428
+W MISGY Q + + AL LF EM ++ P+ V++ LSACAQLG+L GKW+H
Sbjct: 213 ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY 272
Query: 429 IKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEA 488
+ + + + LIDMYAKCG + EA ++F ++ +K+ W +I GY HG+G EA
Sbjct: 273 LNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREA 332
Query: 489 LKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVD 548
+ F EM GI P+ +TF ++L ACS+ GLV EG+ IF+ M Y ++P EH+ C+VD
Sbjct: 333 ISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVD 392
Query: 549 ILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGY 608
+LGRAG L++A FI+ MP++P +WG LL AC+IHKN ++ E L +DP G
Sbjct: 393 LLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGR 452
Query: 609 YVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAI 668
YV +NI+++ + + KAA R + K++ +AK PGC+ I + GTTH F++GDRSH I
Sbjct: 453 YVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
Query: 669 YAMLEKLTGKMREIGYQTETVTSLHD-VEEEEKELMVNVHSEKLAIAFALITTEPGTEIR 727
+ + K+ E GY E L D V+++E+E +V+ HSEKLAI + LI T+PGT IR
Sbjct: 513 QSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIR 572
Query: 728 IIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
I+KNLRVC DCH TK ISKI +R IV+RD RFHHF+DG CSCGDYW
Sbjct: 573 IMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 179/400 (44%), Gaps = 43/400 (10%)
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
K G++ ++AI F SS + ++++ VFD DT WN +I G
Sbjct: 39 KTGLMQDSYAITKFLS---FCISSTSSDFLPYAQI-----VFDGFDRPDTFLWNLMIRGF 90
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+ + S+ +++ M+ + ++ T ++L A + L I K G+ D
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
Y + L++ Y+ G+ A LLF I +PD +++N++I GY G+++ ++ LFR++
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM-AE 209
Query: 297 GQRVSSSTMV--------------------------------GLIPVSSPFGHLHLTCSI 324
+S +TM+ + + G L I
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 325 QGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLT 384
Y K+ +S + L +Y++ E++ A ++F +K+V AW A+ISGY +G
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV-HQLIKSKNLEPNIYVSTA 443
A+S F EM PN +T T L+AC+ G + GK + + + + NL+P I
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 444 LIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGYGLH 482
++D+ + G + EA++ M K N V W ++ +H
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 142/579 (24%), Positives = 236/579 (40%), Gaps = 85/579 (14%)
Query: 8 ITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATR-----HARALFFSV 62
++ + + L QIHA+++ G D +ITK F +T +A+ +F
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLS--FCISSTSSDFLPYAQIVFDGF 75
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDN-YTYAFTIAASPD---DKY 118
PD FL+N++++GFS + P S+ LY R+ + AP N YT+ + A + +
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQ--RMLCSSAPHNAYTFPSLLKACSNLSAFEE 133
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
+HA G+ ++++ +SL++ Y LA +FD +PE D V+WN+VI G V+
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 193
Query: 179 NCYYD-------------------------------DSIQVFRDMVANGVQVDSTTVVTV 207
D +++Q+F +M + V+ D+ ++
Sbjct: 194 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 253
Query: 208 LPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDL 267
L A A+L L G I K D+ + L+ +Y+KCG++ A +F I K +
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 268 IAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGY 327
A+ A+ISGY +G ++ F E+ +G+ P F + CS G
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEM----------QKMGIKPNVITFTAVLTACSYTGL 363
Query: 328 CVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETA 387
V+ G + YS M R D + + T+ + ++ + GL + A
Sbjct: 364 -VEEGKL----------IFYS------MER---DYNLKPTIEHYGCIVDLLGRAGLLDEA 403
Query: 388 LSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ-LIKSKNLEPNIYVSTALID 446
QEM PN V L AC ++ G+ + + LI YV A I
Sbjct: 404 KRFIQEM---PLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIH 460
Query: 447 -MYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGV 505
M K +E R+L +TI L G HE L + H I
Sbjct: 461 AMDKKWDKAAETRRLMKEQGVAKVPGCSTI----SLEGTTHEFLA--GDRSHPEIEKIQS 514
Query: 506 TFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHA 544
+ + G V E EE+ D+V+ E + H+
Sbjct: 515 KWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHS 553
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 262/759 (34%), Positives = 396/759 (52%), Gaps = 13/759 (1%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
IH ++ G DL + L G + A LF + + F L +G++
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ-- 128
Query: 83 PSSSIALYTHL-RLRTNLAPDNYTYAFTIAASPDD-KYGMLLHAHAIVDGFGSNLFVCSS 140
I LY+ L R L P +T + S D + LH+ + G+ SN FV ++
Sbjct: 129 --DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186
Query: 141 LVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVD 200
L++ Y V AR VF+ + +D V W +++ V N Y++DS+++ M G +
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPN 246
Query: 201 STTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFG 260
+ T T L A L G+ K + D V GL+ LY++ GD+S A +F
Sbjct: 247 NYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN 306
Query: 261 MIGKPDLIAYNAMISGYTCNGEIESSVKLF---RELLVSGQRVSSSTMVGLIPVSSPFGH 317
+ K D++ ++ MI+ + NG +V LF RE V + S+++ + G
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG- 365
Query: 318 LHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISG 377
L + G VK G + VS AL +Y++ ++D A KLF E K +WN +I G
Sbjct: 366 --LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 378 YTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPN 437
Y G A S+F+E + + + VT ++ L ACA L S+ G VH L N
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 438 IYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH 497
+ VS +LIDMYAKCG+I A+ +F+ M + +WN +I GY HG G +AL++ M
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 498 SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLE 557
P+G+TFL +L CS+AGL+ +G+E F M+ + IEP EH+ CMV +LGR+GQL+
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 558 KALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYS 617
KA++ I +P EP +W +L A N + AR ++E + +++P YVL+SN+Y+
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663
Query: 618 VGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTG 677
+ + ASIR+ K+ + K PG + IE G H F G H I MLE L
Sbjct: 664 GAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNM 723
Query: 678 KMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPG-TEIRIIKNLRVCL 736
K GY + L D+++EEK+ + VHSE+LA+A+ L+ I I+KNLR+C
Sbjct: 724 KATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICS 783
Query: 737 DCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
DCH+A K IS I +R +V+RD NRFHHF G+CSCGD+W
Sbjct: 784 DCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/762 (32%), Positives = 406/762 (53%), Gaps = 9/762 (1%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
+H ++ G D+ L G A LF + ++ +N +++ FS N
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 83 PSSSIALYTHLRLRTN---LAPDNYTYAFTIAASPDDK---YGMLLHAHAIVDGFGSNLF 136
S L + PD T + ++ G +H A+ L
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG 196
+ ++L+D+Y K + A+ +F ++ V+WNT++ G + V R M+A G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 197 --VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
V+ D T++ +P L + C + K F + V V+ Y+KCG +S
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 255 ARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
A+ +F I + ++NA+I G+ + + S+ ++ +SG S T+ L+ S
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAM 374
L L + G+ +++ + V ++ ++Y E+ + LFD +K++ +WN +
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 375 ISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNL 434
I+GY QNG + AL +F++M+ +++ AC+ L SL G+ H L
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKE 494
E + +++ +LIDMYAK G+I+++ ++F+ + EK+T +WN +I GYG+HG EA+KLF+E
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 688
Query: 495 MLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG 554
M +G +P +TFL +L AC+H+GL+ EG M + + ++P +H+AC++D+LGRAG
Sbjct: 689 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 748
Query: 555 QLEKALEFI-RTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLS 613
QL+KAL + M E +W +LL +C+IH+N ++ + +LFEL+P YVLLS
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLS 808
Query: 614 NIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLE 673
N+Y+ + +R+ + L K GC+ IE+N FV G+R I ++
Sbjct: 809 NLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWS 868
Query: 674 KLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLR 733
L K+ ++GY+ +T++ HD+ EEEK + HSEKLA+ + LI T GT IR+ KNLR
Sbjct: 869 ILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLR 928
Query: 734 VCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+C+DCH A K ISK+ ER IVVRD RFHHFK+G+CSCGDYW
Sbjct: 929 ICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/545 (28%), Positives = 283/545 (51%), Gaps = 11/545 (2%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT 109
G+ +R +F ++R+ ++F +N ++ +S N + + + T+L PD++TY
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 110 IAASP---DDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT 166
I A D G+ +H + G ++FV ++LV Y V A ++FD MPER+
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 167 VAWNTVITGLVRNCYYDDSIQVFRDMV-ANG---VQVDSTTVVTVLPAVAELQELGVGMG 222
V+WN++I N + ++S + +M+ NG D T+VTVLP A +E+G+G G
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 223 IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
+ A K ++ + L+ +YSKCG I+ A+++F M +++++N M+ G++ G+
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 283 IESSVKLFRELLVSGQRVSSS--TMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVS 340
+ + R++L G+ V + T++ +PV L + Y +K + N V+
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA 433
Query: 341 TALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFT 400
A Y++ + A+++F KTV +WNA+I G+ Q+ +L +M +
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 401 PNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQL 460
P+ T+ + LSAC++L SL GK VH I LE +++V +++ +Y CG + + L
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 461 FDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLV 520
FD+M +K+ V+WNT+I GY +G+ AL +F++M+ GI G++ + + ACS +
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 521 REGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLG 580
R G E H K+ +E A ++D+ + G + ++ + + E A W ++
Sbjct: 614 RLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIM 671
Query: 581 ACKIH 585
IH
Sbjct: 672 GYGIH 676
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 199/412 (48%), Gaps = 10/412 (2%)
Query: 125 HAIVDG---FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
H +V G ++ +C+ ++ +Y +R VFD + ++ WN VI+ RN
Sbjct: 107 HQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 166
Query: 182 YDDSIQVFRDMVAN-GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLT 240
YD+ ++ F +M++ + D T V+ A A + ++G+G+ + L K G D +V
Sbjct: 167 YDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN 226
Query: 241 GLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRV 300
LVS Y G ++ A LF ++ + +L+++N+MI ++ NG E S L E++
Sbjct: 227 ALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 286
Query: 301 S----SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
+ +T+V ++PV + + L + G+ VK ++ AL +YS+ I A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMT--TEFTPNPVTITTTLSACA 414
+ +F + K V +WN M+ G++ G T + ++M+ + + VTI + C
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 415 QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNT 474
L K +H + N V+ A + YAKCG++S A+++F + K +WN
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466
Query: 475 IIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
+I G+ +L +M SG+ P T S+L ACS +R G+E+
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 164/328 (50%), Gaps = 8/328 (2%)
Query: 207 VLPAVAELQELGVGMGI-QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKP 265
+L A + +++ +G I Q ++ D + T ++++Y+ CG +R +F +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 266 DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSS-TMVGLIPVSSPFGHLHLTCSI 324
+L +NA+IS Y+ N + ++ F E++ + + T +I + + + ++
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 325 QGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLT 384
G VK+G + + V AL + Y + A +LFD PE+ + +WN+MI ++ NG +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 385 ETALSLFQEMMTTE----FTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYV 440
E + L EMM F P+ T+ T L CA+ + GK VH L+ + +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 441 STALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG- 499
+ AL+DMY+KCG I+ A+ +F + KN V+WNT++ G+ G H + ++ML G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 500 -IHPSGVTFLSILYACSHAGLVREGEEI 526
+ VT L+ + C H + +E+
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKEL 417
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 150/327 (45%), Gaps = 14/327 (4%)
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVG------LIPVSSPFGHLHLTCSIQGY 327
IS + G+++ S + +E + + S + ++ L+ S + + I
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 328 CVKSGAISNSSV-STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTET 386
S + N V T + T+Y+ D +R +FD K + WNA+IS Y++N L +
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 387 ALSLFQEMM-TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI 445
L F EM+ TT+ P+ T + ACA + + G VH L+ L +++V AL+
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV 229
Query: 446 DMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS----GIH 501
Y G +++A QLFD M E+N V+WN++I + +G+ E+ L EM+
Sbjct: 230 SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289
Query: 502 PSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALE 561
P T +++L C+ + G+ + H K R++ + ++D+ + G + A +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGV-HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-Q 347
Query: 562 FIRTMPVEPGPAVWGTLLGACKIHKNT 588
I M W T++G +T
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDT 374
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 2/207 (0%)
Query: 6 SIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNP 65
S+++ +K +L ++H +I N + DL + G +ALF ++ +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLR-TNLAPDNYTYAF-TIAASPDDKYGMLLH 123
+ +N ++ G+ N P ++ ++ + L L + F + P + G H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 124 AHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYD 183
A+A+ + F+ SL+D+Y K + + KVF+ + E+ T +WN +I G +
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 184 DSIQVFRDMVANGVQVDSTTVVTVLPA 210
++I++F +M G D T + VL A
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTA 707
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/656 (36%), Positives = 376/656 (57%), Gaps = 6/656 (0%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
+ AH + GF + + S LVD K + AR+VFD M ER V WN++I L+++
Sbjct: 87 IQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRR 145
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH-RDAYVLT 240
++++++R M+ N V D T+ +V A ++L LA G + +V +
Sbjct: 146 SKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGS 205
Query: 241 GLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRV 300
LV +Y K G A+L+ + + D++ A+I GY+ GE +VK F+ +LV +
Sbjct: 206 ALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQP 265
Query: 301 SSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF 360
+ T ++ + I G VKSG S + T+L T+Y R + +D + ++F
Sbjct: 266 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF 325
Query: 361 DESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLS 420
+W ++ISG QNG E AL F++MM PN T+++ L C+ L
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
Query: 421 FGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYG 480
G+ +H ++ + + Y + LID+Y KCG AR +FD++SE + ++ NT+I+ Y
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA 445
Query: 481 LHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLA 540
+G+G EAL LF+ M++ G+ P+ VT LS+L AC+++ LV EG E+F D K +I
Sbjct: 446 QNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELF-DSFRKDKIMLTN 504
Query: 541 EHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFE 600
+H+ACMVD+LGRAG+LE+A E + T + P +W TLL ACK+H+ ++A + ++ E
Sbjct: 505 DHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILE 563
Query: 601 LDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDR 660
++PG G +L+SN+Y+ + + ++ K KL K P + +EIN TH F++GD
Sbjct: 564 IEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDL 623
Query: 661 -SHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALIT 719
SH ++ I LE+L K +++GY + D+EE KE ++ HSEKLAIAFA +
Sbjct: 624 FSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA-VW 682
Query: 720 TEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
G IRI+KNLRVC+DCH+ K +S++ +R I+ RD+ RFHHF+DG CSCGDYW
Sbjct: 683 RNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 165/353 (46%), Gaps = 4/353 (1%)
Query: 49 FGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAF 108
FG TR A+ + V D+ L L+ G+S + ++ + + L + P+ YTYA
Sbjct: 214 FGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM-LVEKVQPNEYTYAS 272
Query: 109 TIAAS---PDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERD 165
+ + D G L+H + GF S L +SL+ +Y + S V + +VF + +
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPN 332
Query: 166 TVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQC 225
V+W ++I+GLV+N + ++ FR M+ + ++ +S T+ + L + L G I
Sbjct: 333 QVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHG 392
Query: 226 LAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIES 285
+ K+GF RD Y +GL+ LY KCG ARL+F + + D+I+ N MI Y NG
Sbjct: 393 IVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGRE 452
Query: 286 SVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTT 345
++ LF ++ G + + T++ ++ + + C + K + + +
Sbjct: 453 ALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVD 512
Query: 346 IYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE 398
+ R ++ A L E + W ++S + E A + ++++ E
Sbjct: 513 LLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIE 565
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 133/282 (47%), Gaps = 18/282 (6%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
IH ++ +G++S LAS T L + +F + P+ + L+ G N
Sbjct: 289 IHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGR 348
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLLHAHAIVDGFGSNLFVCS 139
++ + + +R ++ P+++T + + + + G +H GF + + S
Sbjct: 349 EEMALIEFRKM-MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGS 407
Query: 140 SLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQV 199
L+DLY K +AR VFD + E D ++ NT+I +N + +++ +F M+ G+Q
Sbjct: 408 GLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP 467
Query: 200 DSTTVVTVLPAV--AELQELGVGMGIQCLAFKFGFHRDAYVLTG-----LVSLYSKCGDI 252
+ TV++VL A + L E G C F F +D +LT +V L + G +
Sbjct: 468 NDVTVLSVLLACNNSRLVEEG------CELFD-SFRKDKIMLTNDHYACMVDLLGRAGRL 520
Query: 253 STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
A +L + PDL+ + ++S + ++E + ++ R++L
Sbjct: 521 EEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKIL 562
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/551 (40%), Positives = 336/551 (60%), Gaps = 6/551 (1%)
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
G +D ++ T L+ +YS G + AR +F K + +NA+ T G E + L+
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 291 REL----LVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
++ + S + + + + HL I + + G S+ + T L +
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMM--TTEFTPNPV 404
Y+R +D A +F P + V +W+AMI+ Y +NG AL F+EMM T + +PN V
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
T+ + L ACA L +L GK +H I + L+ + V +AL+ MY +CG + +++FD M
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Query: 465 SEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGE 524
+++ V+WN++I YG+HGYG +A+++F+EML +G P+ VTF+S+L ACSH GLV EG+
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGK 406
Query: 525 EIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKI 584
+F M + I+P EH+ACMVD+LGRA +L++A + ++ M EPGP VWG+LLG+C+I
Sbjct: 407 RLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRI 466
Query: 585 HKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCT 644
H N ++A AS RLF L+P + G YVLL++IY+ + + + ++++ + R L K PG
Sbjct: 467 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRC 526
Query: 645 LIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMV 704
+E+ + FVS D + I+A L KL M+E GY +T L+++E EEKE +V
Sbjct: 527 WMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIV 586
Query: 705 NVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHF 764
HSEKLA+AF LI T G IRI KNLR+C DCH TKFISK E+ I+VRD NRFH F
Sbjct: 587 LGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRF 646
Query: 765 KDGICSCGDYW 775
K+G+CSCGDYW
Sbjct: 647 KNGVCSCGDYW 657
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 200/449 (44%), Gaps = 46/449 (10%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
++H ++ NG D TKL D G+ +AR +F R I+++N L + ++
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK-------YGMLLHAHAIVDGFGSN 134
+ LY + R + D +TY + + A + G +HAH G+ S+
Sbjct: 158 HGEEVLGLYWKMN-RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 135 LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV- 193
+++ ++LVD+Y +F V A VF MP R+ V+W+ +I +N ++++ FR+M+
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 194 -ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
+S T+V+VL A A L L G I + G V++ LV++Y +CG +
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 253 STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS 312
+ +F + D++++N++IS Y +G + ++++F E+L +G + T V
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFV------ 390
Query: 313 SPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWN 372
S+ G C G + RL E M R D + + +
Sbjct: 391 ----------SVLGACSHEGLVEEG----------KRLFET-MWR---DHGIKPQIEHYA 426
Query: 373 AMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK 432
M+ + + A + Q+M T P P + L +C G++ + + + +
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRT---EPGPKVWGSLLGSCRIHGNVELAERASRRLFA- 482
Query: 433 NLEP-NIYVSTALIDMYAKCGNISEARQL 460
LEP N L D+YA+ E +++
Sbjct: 483 -LEPKNAGNYVLLADIYAEAQMWDEVKRV 510
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 153/324 (47%), Gaps = 12/324 (3%)
Query: 268 IAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGY 327
I+ N +I G+++ ++++ L S T LI L + +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 328 CVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETA 387
+ +G+ + ++T L +YS L +D ARK+FD++ ++T+ WNA+ T G E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 388 LSLFQEMMTTEFTPNPVTITTTLSACAQ----LGSLSFGKWVHQLIKSKNLEPNIYVSTA 443
L L+ +M + T T L AC + L GK +H + + ++Y+ T
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 444 LIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH--SGIH 501
L+DMYA+ G + A +F M +N V+W+ +I Y +G EAL+ F+EM+
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 502 PSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALE 561
P+ VT +S+L AC+ + +G ++ H + + ++ + + +V + GR G+LE
Sbjct: 283 PNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 562 FIRTMPVEPGPAVWGTLLGACKIH 585
M + W +L+ + +H
Sbjct: 342 VFDRMH-DRDVVSWNSLISSYGVH 364
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 9 TFINKAC-----NLPHL---AQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFF 60
T++ KAC + HL +IHA L GY S + +T L FG +A +F
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFG 241
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHL-RLRTNLAPDNYTYAFTIAASPDD--- 116
+ ++ ++ ++ ++ N ++ + + R + +P++ T + A
Sbjct: 242 GMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAAL 301
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
+ G L+H + + G S L V S+LV +Y + ++ + ++VFD M +RD V+WN++I+
Sbjct: 302 EQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSY 361
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVA 212
+ Y +IQ+F +M+ANG T V+VL A +
Sbjct: 362 GVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACS 397
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/728 (34%), Positives = 388/728 (53%), Gaps = 6/728 (0%)
Query: 49 FGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAF 108
FG A +F + ++F +NVLV G++ ++ LY + + PD YT+
Sbjct: 142 FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPC 201
Query: 109 ---TIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERD 165
T PD G +H H + G+ ++ V ++L+ +Y K V AR +FD MP RD
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 166 TVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQC 225
++WN +I+G N + +++F M V D T+ +V+ A L + +G I
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 226 LAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIES 285
GF D V L +Y G A LF + + D++++ MISGY N +
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 286 SVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTT 345
++ +R + + T+ ++ + G L + +K+ IS V+ L
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 346 IYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
+YS+ ID A +F P K V +W ++I+G N AL ++M T PN +T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAIT 500
Query: 406 ITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
+T L+ACA++G+L GK +H + + + ++ AL+DMY +CG ++ A F+S
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-Q 559
Query: 466 EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEE 525
+K+ +WN ++ GY G G ++LF M+ S + P +TF+S+L CS + +VR+G
Sbjct: 560 KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLM 619
Query: 526 IFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH 585
F M Y + P +H+AC+VD+LGRAG+L++A +FI+ MPV P PAVWG LL AC+IH
Sbjct: 620 YFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 678
Query: 586 KNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTL 645
D+ ++++ +FELD SVGYY+LL N+Y+ + + A +R + K+ L GC+
Sbjct: 679 HKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSW 738
Query: 646 IEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVN 705
+E+ G H F+S D+ H I +LE KM E+G + +S D E ++ +
Sbjct: 739 VEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFC 798
Query: 706 VHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFK 765
HSE+ AIAF LI T PG I + KNL +C +CH KFISK R I VRDA FHHFK
Sbjct: 799 GHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFK 858
Query: 766 DGICSCGD 773
DG CSCGD
Sbjct: 859 DGECSCGD 866
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 185/360 (51%), Gaps = 5/360 (1%)
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV-ANGV 197
++ + ++ +F + A VF +M ER+ +WN ++ G + Y+D+++ ++ M+ GV
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 198 QVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARL 257
+ D T VL + +L G + ++G+ D V+ L+++Y KCGD+ +ARL
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 258 LFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSS--TMVGLIPVSSPF 315
LF + + D+I++NAMISGY NG ++LF + G V T+ +I
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELF--FAMRGLSVDPDLMTLTSVISACELL 310
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
G L I Y + +G + SV +LT +Y A KLF K + +W MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 376 SGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE 435
SGY N L + A+ ++ M P+ +T+ LSACA LG L G +H+L L
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 436 PNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM 495
+ V+ LI+MY+KC I +A +F ++ KN ++W +II G L+ EAL ++M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 220/473 (46%), Gaps = 10/473 (2%)
Query: 17 LPHLA---QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVL 73
+P LA ++H ++ GY+ D+ + L G + AR LF + DI +N +
Sbjct: 209 IPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAM 268
Query: 74 VKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHAIVDG 130
+ G+ N + L+ +R ++ PD T I+A D + G +HA+ I G
Sbjct: 269 ISGYFENGMCHEGLELFFAMR-GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFR 190
F ++ VC+SL +Y A K+F M +D V+W T+I+G N D +I +R
Sbjct: 328 FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR 387
Query: 191 DMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
M + V+ D TV VL A A L +L G+ + LA K V L+++YSKC
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCK 447
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
I A +F I + ++I++ ++I+G N ++ R++ ++ Q ++ T+ +
Sbjct: 448 CIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQ-PNAITLTAALA 506
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA 370
+ G L I + +++G + + AL +Y R ++ A F+ S +K V +
Sbjct: 507 ACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTS 565
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIK 430
WN +++GY++ G + LF M+ + P+ +T + L C++ + G ++
Sbjct: 566 WNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME 625
Query: 431 SKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLH 482
+ PN+ ++D+ + G + EA + M + W ++ +H
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 678
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 11/259 (4%)
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
+ G NG++E ++KL + V V L+ + +G V S A
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCE-----WKRAQEEGSKVYSIA 120
Query: 334 ISNSS-----VSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
+S+ S + A ++ R + A +F + E+ + +WN ++ GY + G + A+
Sbjct: 121 LSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAM 180
Query: 389 SLFQEMMTT-EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDM 447
L+ M+ P+ T L C + L+ GK VH + E +I V ALI M
Sbjct: 181 CLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITM 240
Query: 448 YAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
Y KCG++ AR LFD M ++ ++WN +I GY +G HE L+LF M + P +T
Sbjct: 241 YVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTL 300
Query: 508 LSILYACSHAGLVREGEEI 526
S++ AC G R G +I
Sbjct: 301 TSVISACELLGDRRLGRDI 319
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 375 ISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNL 434
+ G NG E A+ L M + + C + G V+ + S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKE 494
+ + A + M+ + GN+ +A +F MSE+N +WN ++ GY GY EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 495 MLH-SGIHPSGVTFLSILYACS-----------HAGLVREGEEIFHDMVN 532
ML G+ P TF +L C H +VR G E+ D+VN
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/560 (41%), Positives = 330/560 (58%), Gaps = 31/560 (5%)
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM 305
Y+ G I + LF PDL + A I+ + NG + + L+ +LL S + T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 306 VGLIPV----SSPFGHLHL------------TCSIQGYCVKSGAISNSSV---------- 339
L+ S H H+ T + Y +S V
Sbjct: 134 SSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLV 193
Query: 340 -STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE 398
STA+ T Y++ ++ AR LFD E+ + +WN MI GY Q+G AL LFQ+++ E
Sbjct: 194 SSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA-E 252
Query: 399 FTPNP--VTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISE 456
P P +T+ LSAC+Q+G+L G+W+H +KS + N+ V T LIDMY+KCG++ E
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 457 ARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH-SGIHPSGVTFLSILYACS 515
A +F+ K+ V WN +I GY +HGY +AL+LF EM +G+ P+ +TF+ L AC+
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACA 372
Query: 516 HAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVW 575
HAGLV EG IF M +Y I+P EH+ C+V +LGRAGQL++A E I+ M ++ +W
Sbjct: 373 HAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLW 432
Query: 576 GTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKR 635
++LG+CK+H + + + +E L L+ + G YVLLSNIY+ ++ A +R + K++
Sbjct: 433 SSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEK 492
Query: 636 KLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDV 695
+ K PG + IEI H F +GDR HS + IY ML K++ +++ GY T T L D+
Sbjct: 493 GIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDL 552
Query: 696 EEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVV 755
EE EKE + VHSE+LAIA+ LI+T+PG+ ++I KNLRVC DCHT TK ISKIT R IV+
Sbjct: 553 EETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVM 612
Query: 756 RDANRFHHFKDGICSCGDYW 775
RD NRFHHF DG CSCGD+W
Sbjct: 613 RDRNRFHHFTDGSCSCGDFW 632
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 222/500 (44%), Gaps = 78/500 (15%)
Query: 10 FINKACNLPHLAQIHA-----QLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
I+K+ ++ + QIHA L+L+ L KL + G RH+ ALF +
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLN--LKLHRAYASHGKIRHSLALFHQTID 92
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHA 124
PD+FLF + S+N + LY L L + + P+ +T++ ++ S K G L+H
Sbjct: 93 PDLFLFTAAINTASINGLKDQAFLLYVQL-LSSEINPNEFTFS-SLLKSCSTKSGKLIHT 150
Query: 125 HAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER-------------------- 164
H + G G + +V + LVD+Y K V A+KVFD MPER
Sbjct: 151 HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA 210
Query: 165 -----------DTVAWNTVITGLVRNCYYDDSIQVFRDMVANG-VQVDSTTVVTVLPAVA 212
D V+WN +I G ++ + +D++ +F+ ++A G + D TVV L A +
Sbjct: 211 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 270
Query: 213 ELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNA 272
++ L G I + V TGL+ +YSKCG + A L+F + D++A+NA
Sbjct: 271 QIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 330
Query: 273 MISGYTCNGEIESSVKLFRELL-VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKS 331
MI+GY +G + +++LF E+ ++G + + T +G + C +
Sbjct: 331 MIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQA----------------CAHA 374
Query: 332 GAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLF 391
G ++ I+ + + + + + + ++S + G + A
Sbjct: 375 GLVNEG------IRIFESMGQ--------EYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 392 QEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE-PNIYVSTALIDMYAK 450
+ M + V ++ L +C G GK + + + N++ IYV L ++YA
Sbjct: 421 KNM---NMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYV--LLSNIYAS 475
Query: 451 CGNISEARQLFDSMSEKNTV 470
G+ ++ + M EK V
Sbjct: 476 VGDYEGVAKVRNLMKEKGIV 495
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/454 (45%), Positives = 303/454 (66%), Gaps = 1/454 (0%)
Query: 323 SIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNG 382
+I ++SG S V +L +Y+ ++ A K+FD+ PEK + AWN++I+G+ +NG
Sbjct: 9 TIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENG 68
Query: 383 LTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVST 442
E AL+L+ EM + P+ TI + LSACA++G+L+ GK VH + L N++ S
Sbjct: 69 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 128
Query: 443 ALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS-GIH 501
L+D+YA+CG + EA+ LFD M +KN+V+W ++I G ++G+G EA++LFK M + G+
Sbjct: 129 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 188
Query: 502 PSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALE 561
P +TF+ ILYACSH G+V+EG E F M +Y+IEP EH CMVD+L RAGQ++KA E
Sbjct: 189 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 248
Query: 562 FIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRN 621
+I++MP++P +W TLLGAC +H ++D+A A ++ +L+P G YVLLSN+Y+ +
Sbjct: 249 YIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQR 308
Query: 622 FPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMRE 681
+ IR+ + + K PG +L+E+ H F+ GD+SH + AIYA L+++TG++R
Sbjct: 309 WSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRS 368
Query: 682 IGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTA 741
GY + DVEEEEKE V HSEK+AIAF LI+T + I ++KNLRVC DCH A
Sbjct: 369 EGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLA 428
Query: 742 TKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
K +SK+ R IVVRD +RFHHFK+G CSC DYW
Sbjct: 429 IKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 143/273 (52%), Gaps = 3/273 (1%)
Query: 214 LQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAM 273
+ ++ +G I + + GF YV L+ LY+ CGD+++A +F + + DL+A+N++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
I+G+ NG+ E ++ L+ E+ G + T+V L+ + G L L + Y +K G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 334 ISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQE 393
N S L +Y+R ++ A+ LFDE +K +W ++I G NG + A+ LF+
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 394 MMTTE-FTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKC 451
M +TE P +T L AC+ G + G ++ ++ + +EP I ++D+ A+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 452 GNISEARQLFDSMS-EKNTVTWNTIIFGYGLHG 483
G + +A + SM + N V W T++ +HG
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 163/352 (46%), Gaps = 37/352 (10%)
Query: 115 DDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVIT 174
D + G +H+ I GFGS ++V +SL+ LY V A KVFD+MPE+D VAWN+VI
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 175 GLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHR 234
G N ++++ ++ +M + G++ D T+V++L A A++ L +G + K G R
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 235 DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
+ + L+ LY++CG + A+ LF + + +++ ++I G NG + +++LF+ +
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM- 181
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
+ GL+P F + CS G VK G +
Sbjct: 182 --------ESTEGLLPCEITFVGILYACSHCGM-VKEG--------------------FE 212
Query: 355 MARKLFDESP-EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSAC 413
R++ +E E + + M+ + G + A + M PN V T L AC
Sbjct: 213 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLLGAC 269
Query: 414 AQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI-DMYAKCGNISEARQLFDSM 464
G ++ I+ LEPN L+ +MYA S+ +++ M
Sbjct: 270 TVHGDSDLAEFAR--IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 319
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 416 LGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTI 475
+ + G+ +H ++ IYV +L+ +YA CG+++ A ++FD M EK+ V WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 476 IFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYR 535
I G+ +G EAL L+ EM GI P G T +S+L AC+ G + G+ + M+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 536 IEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
L + ++D+ R G++E+A M V+ W +L+
Sbjct: 121 TRNLHSSNV-LLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 33/279 (11%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
IH+ +I +G+ S + L + G A +F + D+ +N ++ GF+ N
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGML-----LHAHAIVDGFGSNLFV 137
P ++ALYT + + + PD +T ++A K G L +H + I G NL
Sbjct: 70 PEEALALYTEMNSK-GIKPDGFTIVSLLSACA--KIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 138 CSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA-NG 196
+ L+DLY + RV A+ +FDEM ++++V+W ++I GL N + ++I++F+ M + G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 197 VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH-----RDAYVLTG-------LVS 244
+ T V +L A + C K GF R+ Y + +V
Sbjct: 187 LLPCEITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 235
Query: 245 LYSKCGDISTA-RLLFGMIGKPDLIAYNAMISGYTCNGE 282
L ++ G + A + M +P+++ + ++ T +G+
Sbjct: 236 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 274
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/580 (39%), Positives = 329/580 (56%), Gaps = 6/580 (1%)
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV--LTGLVSLYSKCGDISTAR 256
V++ + ++ L+EL M IQ A K ++V L + +S AR
Sbjct: 27 VNTQNPILLISKCNSLREL---MQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYAR 83
Query: 257 LLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFG 316
LF + +PD++ +N+M GY+ LF E+L G + T L+ +
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK 143
Query: 317 HLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMIS 376
L + +K G N V L +Y+ ++D AR +FD E V +NAMI+
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMIT 203
Query: 377 GYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
GY + ALSLF+EM PN +T+ + LS+CA LGSL GKW+H+ K +
Sbjct: 204 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 263
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML 496
+ V+TALIDM+AKCG++ +A +F+ M K+T W+ +I Y HG +++ +F+ M
Sbjct: 264 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR 323
Query: 497 HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQL 556
+ P +TFL +L ACSH G V EG + F MV+K+ I P +H+ MVD+L RAG L
Sbjct: 324 SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNL 383
Query: 557 EKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIY 616
E A EFI +P+ P P +W LL AC H N D+A SER+FELD G YV+LSN+Y
Sbjct: 384 EDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLY 443
Query: 617 SVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLT 676
+ + + S+R+V K RK K PGC+ IE+N H F SGD S T ++ L+++
Sbjct: 444 ARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 503
Query: 677 GKMREIGYQTETVTSLH-DVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVC 735
+++ GY +T +H ++ ++EKE+ + HSEKLAI F L+ T PGT IR++KNLRVC
Sbjct: 504 KELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 563
Query: 736 LDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
DCH A K IS I R +V+RD RFHHF+DG CSCGD+W
Sbjct: 564 RDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 182/368 (49%), Gaps = 3/368 (0%)
Query: 149 SRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVL 208
S + AR +F+ M E D V +N++ G R + +F +++ +G+ D+ T ++L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 209 PAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLI 268
A A + L G + CL+ K G + YV L+++Y++C D+ +AR +F I +P ++
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 269 AYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYC 328
YNAMI+GY ++ LFRE+ + + T++ ++ + G L L I Y
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
K V+TAL ++++ +D A +F++ K AW+AMI Y +G E ++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDM 447
+F+ M + P+ +T L+AC+ G + G K+ Q++ + P+I +++D+
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 448 YAKCGNISEARQLFDSMSEKNT-VTWNTIIFGYGLHGYGHEALKLFKEMLH-SGIHPSGV 505
++ GN+ +A + D + T + W ++ H A K+ + + H
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDY 436
Query: 506 TFLSILYA 513
LS LYA
Sbjct: 437 VILSNLYA 444
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 193/433 (44%), Gaps = 51/433 (11%)
Query: 8 ITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDF---GATRHARALFFSVRN 64
I I+K +L L QI A I + D++ + KL + + +AR LF ++
Sbjct: 33 ILLISKCNSLRELMQIQAYAI-KSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK---YGML 121
PDI +FN + +G+S +P +L+ + L + PDNYT+ + A K G
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEI-LEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
LH ++ G N++VC +L+++Y + V AR VFD + E V +N +ITG R
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
++++ +FR+M ++ + T+++VL + A L L +G I A K F + V T
Sbjct: 211 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 270
Query: 242 LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
L+ +++KCG + A +F + D A++AMI Y +G+ E S+ +F + +
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 330
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
T +GL+ S G ++ RK F
Sbjct: 331 EITFLGLLNACSHTG-----------------------------------RVEEGRKYFS 355
Query: 362 ESPEK-----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
+ K ++ + +M+ ++ G E A ++ +P P+ L+AC+
Sbjct: 356 QMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL---PISPTPMLWRILLAACSSH 412
Query: 417 GSLSFGKWVHQLI 429
+L + V + I
Sbjct: 413 NNLDLAEKVSERI 425
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/628 (37%), Positives = 355/628 (56%), Gaps = 79/628 (12%)
Query: 149 SRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVL 208
SR+ A ++FDE+PE DT ++N +++ VRN ++ + F M
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM---------------- 150
Query: 209 PAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLI 268
FK DA +++ Y++ G++ AR LF + + + +
Sbjct: 151 ------------------PFK-----DAASWNTMITGYARRGEMEKARELFYSMMEKNEV 187
Query: 269 AYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYC 328
++NAMISGY G++E + F+ + PV
Sbjct: 188 SWNAMISGYIECGDLEKASHFFK----------------VAPVR---------------- 215
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLF-DESPEKTVAAWNAMISGYTQNGLTETA 387
G ++ TA+ T Y + ++++A +F D + K + WNAMISGY +N E
Sbjct: 216 ---GVVA----WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDG 268
Query: 388 LSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDM 447
L LF+ M+ PN +++ L C++L +L G+ +HQ++ L ++ T+LI M
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISM 328
Query: 448 YAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
Y KCG + +A +LF+ M +K+ V WN +I GY HG +AL LF+EM+ + I P +TF
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 508 LSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP 567
+++L AC+HAGLV G F MV Y++EP +H+ CMVD+LGRAG+LE+AL+ IR+MP
Sbjct: 389 VAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
Query: 568 VEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAAS 627
P AV+GTLLGAC++HKN ++A A+E+L +L+ + YV L+NIY+ + A
Sbjct: 449 FRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVAR 508
Query: 628 IREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTE 687
+R+ K+ + K PG + IEI H F S DR H +I+ L++L KM+ GY+ E
Sbjct: 509 VRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPE 568
Query: 688 TVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISK 747
+LH+VEEE+KE ++ HSEKLA+AF I G++I++ KNLR+C DCH A KFIS+
Sbjct: 569 LEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISE 628
Query: 748 ITERVIVVRDANRFHHFKDGICSCGDYW 775
I +R I+VRD RFHHFKDG CSCGDYW
Sbjct: 629 IEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 167/347 (48%), Gaps = 11/347 (3%)
Query: 121 LLHAHAIVDGFGS-NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRN 179
++ AH + D + F + ++ Y + A+ FD MP +D +WNT+ITG R
Sbjct: 109 MMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 180 CYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVL 239
+ + ++F M+ +V +++ +L++ FK R
Sbjct: 169 GEMEKARELFYSMMEKN-EVSWNAMISGYIECGDLEKAS-------HFFKVAPVRGVVAW 220
Query: 240 TGLVSLYSKCGDISTARLLF-GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
T +++ Y K + A +F M +L+ +NAMISGY N E +KLFR +L G
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
R +SS + + S L L I KS ++ + T+L ++Y + E+ A K
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
LF+ +K V AWNAMISGY Q+G + AL LF+EM+ + P+ +T L AC G
Sbjct: 341 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Query: 419 LSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
++ G + +++ +EP T ++D+ + G + EA +L SM
Sbjct: 401 VNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 198/465 (42%), Gaps = 66/465 (14%)
Query: 32 YQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYT 91
+ S L I+K ++ + A LF + PD F +N+++ + N + + + +
Sbjct: 95 WNSLLIGISKDPSRMME------AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFD 148
Query: 92 HLRLRT----NLAPDNYTYAFTIAASPDDKYGML----LHAHAIVDGF--------GSNL 135
+ + N Y + + + Y M+ + +A++ G+ S+
Sbjct: 149 RMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHF 208
Query: 136 F---------VCSSLVDLYFKFSRVGLARKVFDEMP-ERDTVAWNTVITGLVRNCYYDDS 185
F ++++ Y K +V LA +F +M ++ V WN +I+G V N +D
Sbjct: 209 FKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDG 268
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
+++FR M+ G++ +S+ + + L +EL L +G I + K D LT L+S+
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISM 328
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM 305
Y KCG++ A LF ++ K D++A+NAMISGY +G + ++ LFRE++ + R T
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 306 VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPE 365
V ++ L C+ G V+ + S M R D E
Sbjct: 389 VAVL----------LACNHAGL-----------VNIGMAYFES------MVR---DYKVE 418
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
+ M+ + G E AL L + M F P+ T L AC ++ ++
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSM---PFRPHAAVFGTLLGACRVHKNVELAEFA 475
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
+ + N + N L ++YA + ++ M E N V
Sbjct: 476 AEKLLQLNSQ-NAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/665 (35%), Positives = 368/665 (55%), Gaps = 8/665 (1%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G +H + + G G NL + L+D+Y K +A KVFD MPER+ V+W+ +++G V
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
N S+ +F +M G+ + T T L A L L G+ I K GF V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG- 297
LV +YSKCG I+ A +F I LI++NAMI+G+ G ++ F + +
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 298 -QRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG--AISNSSVSTALTTIYSRLNEID 354
+R T+ L+ S G ++ I G+ V+SG S+++++ +L +Y + +
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 355 MARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
ARK FD+ EKT+ +W+++I GY Q G A+ LF+ + + +++ + A
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324
Query: 415 QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNT 474
L GK + L V +++DMY KCG + EA + F M K+ ++W
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 475 IIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKY 534
+I GYG HG G +++++F EML I P V +L++L ACSH+G+++EGEE+F ++ +
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 444
Query: 535 RIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVA 594
I+P EH+AC+VD+LGRAG+L++A I TMP++P +W TLL C++H + ++ +
Sbjct: 445 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 504
Query: 595 SERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHV 654
+ L +D + YV++SN+Y + + + RE+ + L K G + +EI H
Sbjct: 505 GKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHF 564
Query: 655 FVSGDRSHSHATAIYAMLEKLTGKMR-EIGYQTETVTSLHDVEEEEKELMVNVHSEKLAI 713
F SG+ SH I L++ ++R E+GY LHD+++E KE + HSEKLAI
Sbjct: 565 FRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAI 624
Query: 714 AFALIT---TEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICS 770
AL T + G IR+ KNLRVC+DCH K +SKIT+ VVRDA RFH F+DG CS
Sbjct: 625 GLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCS 684
Query: 771 CGDYW 775
CGDYW
Sbjct: 685 CGDYW 689
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 3/182 (1%)
Query: 401 PNP-VTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQ 459
PN + + L C + G G VH + N+ S LIDMY KC A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 460 LFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGL 519
+FDSM E+N V+W+ ++ G+ L+G +L LF EM GI+P+ TF + L AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 520 VREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
+ +G +I H K E + E +VD+ + G++ +A + R + V+ W ++
Sbjct: 123 LEKGLQI-HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMI 180
Query: 580 GA 581
Sbjct: 181 AG 182
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 142/328 (43%), Gaps = 30/328 (9%)
Query: 8 ITFINKACNLPHL----AQIHAQLILNGYQSDLASITKLTQKLFDF----GATRHARALF 59
+T + KAC+ + QIH L+ +G+ S +T L D G AR F
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHC--PSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 60 FSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD--- 116
++ + ++ L+ G++ ++ L+ L+ N D++ + I D
Sbjct: 271 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ-ELNSQIDSFALSSIIGVFADFALL 329
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
+ G + A A+ G V +S+VD+Y K V A K F EM +D ++W VITG
Sbjct: 330 RQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGY 389
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPA------VAELQELGVGMGIQCLAFKF 230
++ S+++F +M+ + ++ D + VL A + E +EL L
Sbjct: 390 GKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEEL-----FSKLLETH 444
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTAR-LLFGMIGKPDLIAYNAMISGYTCNGEIESSVKL 289
G +V L + G + A+ L+ M KP++ + ++S +G+IE ++
Sbjct: 445 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 504
Query: 290 FRELLVSGQRVSSSTMVGLIPVSSPFGH 317
+ LL R+ + + +S+ +G
Sbjct: 505 GKILL----RIDAKNPANYVMMSNLYGQ 528
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/642 (37%), Positives = 351/642 (54%), Gaps = 2/642 (0%)
Query: 136 FVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVAN 195
F+ + L+++Y K AR V P R+ V+W ++I+GL +N ++ ++ F +M
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 196 GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA 255
GV + T AVA L+ G I LA K G D +V +Y K A
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 256 RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
R LF I + +L +NA IS +G +++ F E +S T + S +
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
HL+L + G ++SG ++ SV L Y + +I + +F E K +W +++
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLV 282
Query: 376 SGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE 435
+ Y QN E A L+ + I++ LSACA + L G+ +H +E
Sbjct: 283 AAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342
Query: 436 PNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM 495
I+V +AL+DMY KCG I ++ Q FD M EKN VT N++I GY G AL LF+EM
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 496 LHSGIHPSG--VTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRA 553
G P+ +TF+S+L ACS AG V G +IF M + Y IEP AEH++C+VD+LGRA
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462
Query: 554 GQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLS 613
G +E+A EFI+ MP++P +VWG L AC++H + +A+E LF+LDP G +VLLS
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLS 522
Query: 614 NIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLE 673
N ++ + +A ++RE K + K G + I + H F + DRSH I L
Sbjct: 523 NTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLA 582
Query: 674 KLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLR 733
KL +M GY+ + SL+D+EEEEK V+ HSEKLA+AF L++ IRI KNLR
Sbjct: 583 KLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLR 642
Query: 734 VCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+C DCH+ KF+S +R I+VRD NRFH FKDGICSC DYW
Sbjct: 643 ICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 204/425 (48%), Gaps = 8/425 (1%)
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTY--AFTIAASPD-DKYGMLL 122
++ + L+ G + N S+++ + +R R + P+++T+ AF AS G +
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMR-REGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
HA A+ G ++FV S D+Y K ARK+FDE+PER+ WN I+ V +
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
++I+ F + +S T L A ++ L +GM + L + GF D V GL
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
+ Y KC I ++ ++F +G + +++ ++++ Y N E E + L+ S
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
+ ++ + L L SI + VK+ V +AL +Y + I+ + + FDE
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 363 SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEF--TPNPVTITTTLSACAQLGSLS 420
PEK + N++I GY G + AL+LF+EM TPN +T + LSAC++ G++
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 421 FGKWVHQLIKSK-NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVT-WNTIIFG 478
G + ++S +EP + ++DM + G + A + M + T++ W +
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNA 490
Query: 479 YGLHG 483
+HG
Sbjct: 491 CRMHG 495
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 418 SLSFGKWVH-QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTII 476
S+ G+ VH +++K+ + P +++ LI+MY+K + AR + +N V+W ++I
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
G +G+ AL F EM G+ P+ TF A + L G++I V RI
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/658 (34%), Positives = 375/658 (56%), Gaps = 5/658 (0%)
Query: 40 TKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNL 99
+ L + ++G LF V D ++NV++ G++ + S I ++ +R+ +
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM-DQI 235
Query: 100 APDNYTYAFTIAASPDD---KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARK 156
+P+ T+ ++ G+ LH +V G + +SL+ +Y K R A K
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 157 VFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQE 216
+F M DTV WN +I+G V++ ++S+ F +M+++GV D+ T ++LP+V++ +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355
Query: 217 LGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISG 276
L I C + D ++ + L+ Y KC +S A+ +F D++ + AMISG
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 277 YTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISN 336
Y NG S+++FR L+ + T+V ++PV L L + G+ +K G +
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNR 475
Query: 337 SSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMT 396
++ A+ +Y++ +++A ++F+ ++ + +WN+MI+ Q+ A+ +F++M
Sbjct: 476 CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV 535
Query: 397 TEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISE 456
+ + V+I+ LSACA L S SFGK +H + +L ++Y + LIDMYAKCGN+
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595
Query: 457 ARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH-SGIHPSGVTFLSILYACS 515
A +F +M EKN V+WN+II G HG ++L LF EM+ SGI P +TFL I+ +C
Sbjct: 596 AMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCC 655
Query: 516 HAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVW 575
H G V EG F M Y I+P EH+AC+VD+ GRAG+L +A E +++MP P VW
Sbjct: 656 HVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVW 715
Query: 576 GTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKR 635
GTLLGAC++HKN ++A VAS +L +LDP + GYYVL+SN ++ R + +R + K+R
Sbjct: 716 GTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKER 775
Query: 636 KLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLH 693
++ K PG + IEIN TH+FVSGD +H ++ IY++L L G++R GY + LH
Sbjct: 776 EVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 235 bits (599), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 156/587 (26%), Positives = 286/587 (48%), Gaps = 12/587 (2%)
Query: 8 ITFINKACNLPHL----AQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFF--S 61
++ + +AC+ P+L Q+HA LI+N D + ++ G+ +F+
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 62 VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK--YG 119
+R I +N ++ F N + ++A Y + L ++PD T+ + A K G
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKM-LCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 120 MLLHAHAIVD-GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
+ + + G N FV SSL+ Y ++ ++ + K+FD + ++D V WN ++ G +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
D I+ F M + + ++ T VL A + +G+ + L G + +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
L+S+YSKCG A LF M+ + D + +N MISGY +G +E S+ F E++ SG
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+ T L+P S F +L I Y ++ + +++AL Y + + MA+
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
+F + V + AMISGY NGL +L +F+ ++ + +PN +T+ + L L +
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFG 478
L G+ +H I K + + A+IDMYAKCG ++ A ++F+ +S+++ V+WN++I
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 479 YGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEP 538
A+ +F++M SGI V+ + L AC++ G+ I H + K+ +
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAI-HGFMIKHSLAS 575
Query: 539 LAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH 585
+ ++D+ + G L+ A+ +TM E W +++ AC H
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
P ++ L AC+ L GK VH + ++ + Y ++ MYA CG+ S+ ++F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 463 SMSEKNTVT--WNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYAC 514
+ + + WN+II + +G ++AL + +ML G+ P TF ++ AC
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/625 (37%), Positives = 353/625 (56%), Gaps = 42/625 (6%)
Query: 154 ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG-VQVDSTTVVTVLPAVA 212
AR++ PE D +NT++ G + +S+ VF +M+ G V DS + V+ AV
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 213 ELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNA 272
+ L G + C A K G +V T L+ +Y CG + AR +F + +P+L+A+NA
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 273 MISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG 332
+I+ ++ + ++F ++LV H + GY +K+G
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRN-------------------HTSWNVMLAGY-IKAG 217
Query: 333 AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQ 392
E++ A+++F E P + +W+ MI G NG + F+
Sbjct: 218 -------------------ELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFR 258
Query: 393 EMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCG 452
E+ +PN V++T LSAC+Q GS FGK +H ++ + V+ ALIDMY++CG
Sbjct: 259 ELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCG 318
Query: 453 NISEARQLFDSMSEKNT-VTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSIL 511
N+ AR +F+ M EK V+W ++I G +HG G EA++LF EM G+ P G++F+S+L
Sbjct: 319 NVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLL 378
Query: 512 YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPG 571
+ACSHAGL+ EGE+ F +M Y IEP EH+ CMVD+ GR+G+L+KA +FI MP+ P
Sbjct: 379 HACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPT 438
Query: 572 PAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREV 631
VW TLLGAC H N ++A +RL ELDP + G VLLSN Y+ + ASIR+
Sbjct: 439 AIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKS 498
Query: 632 AKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMR-EIGYQTETVT 690
+++ KT +L+E+ T + F +G++ + L+++ +++ E GY E +
Sbjct: 499 MIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVAS 558
Query: 691 SLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITE 750
+L+DVEEEEKE V+ HSEKLA+AFAL G IRI+KNLR+C DCH K SK+
Sbjct: 559 ALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYG 618
Query: 751 RVIVVRDANRFHHFKDGICSCGDYW 775
I+VRD NRFH FKDG CSC DYW
Sbjct: 619 VEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 223/484 (46%), Gaps = 47/484 (9%)
Query: 8 ITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQ--KLFDFGATRHARALFFSVRNP 65
++ +N NL L QIH I G +D KL + A +AR L P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLL 122
D F+FN LV+G+S + P +S+A++ + + + PD++++AF I A + + G +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
H A+ G S+LFV ++L+ +Y V ARKVFDEM + + VAWN VIT R
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
+ ++F M+ R+ +
Sbjct: 189 AGAREIFDKMLV---------------------------------------RNHTSWNVM 209
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
++ Y K G++ +A+ +F + D ++++ MI G NG S FREL +G +
Sbjct: 210 LAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNE 269
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
++ G++ S G + G+ K+G SV+ AL +YSR + MAR +F+
Sbjct: 270 VSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEG 329
Query: 363 SPEK-TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
EK + +W +MI+G +G E A+ LF EM TP+ ++ + L AC+ G +
Sbjct: 330 MQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEE 389
Query: 422 GK-WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNT-VTWNTIIFGY 479
G+ + ++ + ++EP I ++D+Y + G + +A M T + W T++
Sbjct: 390 GEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGAC 449
Query: 480 GLHG 483
HG
Sbjct: 450 SSHG 453
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 191/468 (40%), Gaps = 77/468 (16%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q+H Q + +G +S L T L G AR +F + P++ +N ++
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSL 141
+ + ++ + +R N+T + A
Sbjct: 187 DVAGAREIFDKMLVR------NHTSWNVMLAG---------------------------- 212
Query: 142 VDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDS 201
Y K + A+++F EMP RD V+W+T+I G+ N +++S FR++ G+ +
Sbjct: 213 ---YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNE 269
Query: 202 TTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF-G 260
++ VL A ++ G + K G+ V L+ +YS+CG++ ARL+F G
Sbjct: 270 VSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEG 329
Query: 261 MIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHL 320
M K ++++ +MI+G +G+ E +V+LF E+ T G+ P F L
Sbjct: 330 MQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM----------TAYGVTPDGISFISLLH 379
Query: 321 TCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQ 380
CS G ++ G S + ++++ PE + + M+ Y +
Sbjct: 380 ACSHAGL-IEEGEDYFSEM-----------------KRVYHIEPE--IEHYGCMVDLYGR 419
Query: 381 NGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYV 440
+G + A +M P + T L AC+ G++ + V Q + L+PN
Sbjct: 420 SGKLQKAYDFICQM---PIPPTAIVWRTLLGACSSHGNIELAEQVKQRL--NELDPNNSG 474
Query: 441 STALI-DMYAKCGNISEARQLFDSM---SEKNTVTWNTIIFGYGLHGY 484
L+ + YA G + + SM K T W+ + G ++ +
Sbjct: 475 DLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKF 522
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/757 (31%), Positives = 398/757 (52%), Gaps = 3/757 (0%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
QI Q++ +G +S LA L L G +A +F + D +N + ++ N
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 82 SPSSSIALYTHLR-LRTNLAPDNYTYAFTIAASPD-DKYGMLLHAHAIVDGFGSNLFVCS 139
S +++ +R + + ++ D K+G +H + GF S + VC+
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 140 SLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQV 199
+L+ +Y R A VF +MP +D ++WN+++ V + D++ + M+++G V
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 200 DSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF 259
+ T + L A G + L G + + LVS+Y K G++S +R +
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 260 GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS-PFGHL 318
+ + D++A+NA+I GY + + + ++ F+ + V G + T+V ++ P L
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480
Query: 319 HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGY 378
+ Y V +G S+ V +L T+Y++ ++ ++ LF+ + + WNAM++
Sbjct: 481 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 540
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
+G E L L +M + + + + + LSA A+L L G+ +H L E +
Sbjct: 541 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 600
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS 498
++ A DMY+KCG I E ++ ++ +WN +I G HGY E F EML
Sbjct: 601 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 660
Query: 499 GIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEK 558
GI P VTF+S+L ACSH GLV +G + + + +EP EH C++D+LGR+G+L +
Sbjct: 661 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 720
Query: 559 ALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSV 618
A FI MP++P VW +LL +CKIH N D R A+E L +L+P YVL SN+++
Sbjct: 721 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 780
Query: 619 GRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGK 678
+ ++R+ + + K C+ +++ F GDR+H IYA LE +
Sbjct: 781 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 840
Query: 679 MREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDC 738
++E GY +T +L D +EE+KE + HSE+LA+A+AL++T G+ +RI KNLR+C DC
Sbjct: 841 IKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDC 900
Query: 739 HTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
H+ KF+S++ R IV+RD RFHHF+ G+CSC DYW
Sbjct: 901 HSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 283/600 (47%), Gaps = 13/600 (2%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q+H + +G SD+ T + +G +R +F + + ++ + L+ G+S
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYGMLLHAHAIVDGFGSNLFVC 138
P I +Y +R + + + + I++ D+ G + + G S L V
Sbjct: 140 EPEEVIDIYKGMR-GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+SL+ + V A +FD+M ERDT++WN++ +N + ++S ++F M +
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
V+STTV T+L + + G GI L K GF V L+ +Y+ G A L+
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 259 FGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHL 318
F + DLI++N++++ + +G ++ L ++ SG+ V+ T +
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378
Query: 319 HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGY 378
+ G V SG N + AL ++Y ++ E+ +R++ + P + V AWNA+I GY
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS-LSFGKWVHQLIKSKNLEPN 437
++ + AL+ FQ M + N +T+ + LSAC G L GK +H I S E +
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
Query: 438 IYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH 497
+V +LI MYAKCG++S ++ LF+ + +N +TWN ++ HG+G E LKL +M
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 498 SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLE 557
G+ +F L A + ++ EG+++ H + K E + D+ + G++
Sbjct: 559 FGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617
Query: 558 KALEFIRTMP--VEPGPAVWGTLLGACKIHKNTDIARVASERLFEL--DPGSVGYYVLLS 613
E ++ +P V W L+ A H + + E+ PG V + LL+
Sbjct: 618 ---EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLT 674
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 217/453 (47%), Gaps = 5/453 (1%)
Query: 144 LYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTT 203
+Y KF RV AR +FD MP R+ V+WNT+++G+VR Y + ++ FR M G++ S
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 204 VVTVLPAVAELQELGVGMGIQCLAF--KFGFHRDAYVLTGLVSLYSKCGDISTARLLFGM 261
+ +++ A + G+Q F K G D YV T ++ LY G +S +R +F
Sbjct: 61 IASLVTACGRSGSM-FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 262 IGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLT 321
+ +++++ +++ GY+ GE E + +++ + G + ++M +I L
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 322 CSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQN 381
I G VKSG S +V +L ++ + +D A +FD+ E+ +WN++ + Y QN
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 382 GLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVS 441
G E + +F M N T++T LS + +G+ +H L+ + + V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 442 TALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIH 501
L+ MYA G EA +F M K+ ++WN+++ + G +AL L M+ SG
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 502 PSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALE 561
+ VTF S L AC +G I H +V + +V + G+ G++ ++
Sbjct: 360 VNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 562 FIRTMPVEPGPAVWGTLLGACKIHKNTDIARVA 594
+ MP A W L+G ++ D A A
Sbjct: 419 VLLQMPRRDVVA-WNALIGGYAEDEDPDKALAA 450
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 133/543 (24%), Positives = 244/543 (44%), Gaps = 10/543 (1%)
Query: 49 FGATRHARALF--FSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTY 106
FG + AR LF VRN +N ++ G + + + + P ++
Sbjct: 5 FGRVKPARHLFDIMPVRNE--VSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVI 61
Query: 107 AFTIAASPDD----KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP 162
A + A + G+ +H G S+++V ++++ LY + V +RKVF+EMP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 163 ERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG 222
+R+ V+W +++ G ++ I +++ M GV + ++ V+ + L++ +G
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 223 IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
I K G V L+S+ G++ A +F + + D I++N++ + Y NG
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA 342
IE S ++F + V+S+T+ L+ V H I G VK G S V
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301
Query: 343 LTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
L +Y+ A +F + P K + +WN++++ + +G + AL L M+++ + N
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
VT T+ L+AC G+ +H L+ L N + AL+ MY K G +SE+R++
Sbjct: 362 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 421
Query: 463 SMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVRE 522
M ++ V WN +I GY +AL F+ M G+ + +T +S+L AC G + E
Sbjct: 422 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 523 GEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGAC 582
+ H + E ++ + + G L + + + W +L A
Sbjct: 482 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAAN 540
Query: 583 KIH 585
H
Sbjct: 541 AHH 543
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/555 (39%), Positives = 319/555 (57%), Gaps = 2/555 (0%)
Query: 223 IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
I + + GF +LT L+ GD+ AR +F + KP + +N + GY N
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA 342
S+ L++++ G R T ++ S G ++ + VK G V+T
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149
Query: 343 LTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
L +Y + E+ A LF+ K + AWNA ++ Q G + AL F +M +
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
T+ + LSAC QLGSL G+ ++ + + ++ NI V A +DM+ KCGN AR LF+
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 463 SMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVRE 522
M ++N V+W+T+I GY ++G EAL LF M + G+ P+ VTFL +L ACSHAGLV E
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNE 329
Query: 523 GEEIFHDMV--NKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLG 580
G+ F MV N +EP EH+ACMVD+LGR+G LE+A EFI+ MPVEP +WG LLG
Sbjct: 330 GKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLG 389
Query: 581 ACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKT 640
AC +H++ + + ++ L E P Y+VLLSNIY+ + +R +K K
Sbjct: 390 ACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKV 449
Query: 641 PGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEK 700
+ +E G H F GD+SH + AIY L+++ K+R++GY +T + HDVE EEK
Sbjct: 450 AAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEK 509
Query: 701 ELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANR 760
E ++ HSEKLAIAF LI PG IR++KNLR C DCH +KF+S +T I++RD NR
Sbjct: 510 ECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNR 569
Query: 761 FHHFKDGICSCGDYW 775
FHHF++G+CSC ++W
Sbjct: 570 FHHFRNGVCSCKEFW 584
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 175/376 (46%), Gaps = 4/376 (1%)
Query: 111 AASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWN 170
A+S K +HA + GF + + L++ + AR+VFDEM + WN
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN 78
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
T+ G VRN +S+ +++ M GV+ D T V+ A+++L + G + K+
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
GF V T LV +Y K G++S+A LF + DL+A+NA ++ G +++ F
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYF 198
Query: 291 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRL 350
++ + S T+V ++ G L + I K N V A ++ +
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 351 NEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
+ AR LF+E ++ V +W+ MI GY NG + AL+LF M PN VT L
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVL 318
Query: 411 SACAQLGSLSFGKWVHQLI---KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-E 466
SAC+ G ++ GK L+ KNLEP ++D+ + G + EA + M E
Sbjct: 319 SACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVE 378
Query: 467 KNTVTWNTIIFGYGLH 482
+T W ++ +H
Sbjct: 379 PDTGIWGALLGACAVH 394
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 140/562 (24%), Positives = 238/562 (42%), Gaps = 59/562 (10%)
Query: 19 HLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFS 78
L +IHA ++ G+ + +T+L + L G +AR +F + P IFL+N L KG+
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 79 VNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHAIVDGFGSNL 135
N P S+ LY +R + PD +TY F + A D G LHAH + GFG
Sbjct: 86 RNQLPFESLLLYKKMR-DLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 136 FVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVAN 195
V + LV +Y KF + A +F+ M +D VAWN + V+ +++ F M A+
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 196 GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA 255
VQ DS TVV++L A +L L +G I A K + V + ++ KCG+ A
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 256 RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
R+LF + + ++++++ MI GY NG+ ++ LF + G R + T +G++
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA---- 320
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
C +G ++ +L + D++ E + M+
Sbjct: 321 ------------CSHAGLVNEGKRYFSLMVQSN------------DKNLEPRKEHYACMV 356
Query: 376 SGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE 435
++GL E A ++M P+ L ACA + G+ V ++ +
Sbjct: 357 DLLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPD 413
Query: 436 PNIYVSTALIDMYAKCGN---ISEARQLFDSMSEKNTVTWNTIIFGYGLHGYG-----HE 487
Y L ++YA G + + R + K ++++ F +H + H
Sbjct: 414 IGSY-HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHP 472
Query: 488 ALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMV 547
K E L IL G V + +FHD+ + + L+ H +
Sbjct: 473 QSKAIYEKLD-----------EILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLA 521
Query: 548 D----ILGRAGQLEKALEFIRT 565
I GR G + ++ +RT
Sbjct: 522 IAFGLIKGRPGHPIRVMKNLRT 543
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 2/169 (1%)
Query: 423 KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLH 482
K +H ++ + T L++ G++ ARQ+FD M + WNT+ GY +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 483 GYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEH 542
E+L L+K+M G+ P T+ ++ A S G G + H V KY L
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFAL-HAHVVKYGFGCLGIV 146
Query: 543 HACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIA 591
+V + + G+L A +M V+ A W L C N+ IA
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVA-WNAFLAVCVQTGNSAIA 194
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/577 (37%), Positives = 338/577 (58%), Gaps = 1/577 (0%)
Query: 191 DMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
D+ + + D T+L + L G + + F D + L+++Y+KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
+ AR +F + + D + + +ISGY+ + ++ F ++L G + T+ +I
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA 370
++ + G+CVK G SN V +AL +Y+R +D A+ +FD + +
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIK 430
WNA+I+G+ + TE AL LFQ M+ F P+ + + AC+ G L GKWVH +
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 431 SKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALK 490
+ + L+DMYAK G+I +AR++FD +++++ V+WN+++ Y HG+G EA+
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 491 LFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDIL 550
F+EM GI P+ ++FLS+L ACSH+GL+ EG +++++ K I P A H+ +VD+L
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH-YYELMKKDGIVPEAWHYVTVVDLL 408
Query: 551 GRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYV 610
GRAG L +AL FI MP+EP A+W LL AC++HKNT++ A+E +FELDP G +V
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468
Query: 611 LLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYA 670
+L NIY+ G + AA +R+ K+ + K P C+ +EI H+FV+ D H I
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528
Query: 671 MLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIK 730
E++ K++E+GY +T + V+++E+E+ + HSEK+A+AFAL+ T PG+ I I K
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588
Query: 731 NLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDG 767
N+RVC DCHTA K SK+ R I+VRD NRFHHFKD
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 179 bits (453), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 188/365 (51%), Gaps = 1/365 (0%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G ++HAH + F ++ + ++L+++Y K + ARKVF++MP+RD V W T+I+G +
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
+ D++ F M+ G + T+ +V+ A A + G + K GF + +V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
+ L+ LY++ G + A+L+F + + +++NA+I+G+ E +++LF+ +L G
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
R S + L S G L + Y +KSG + L +Y++ I ARK
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
+FD ++ V +WN++++ Y Q+G + A+ F+EM PN ++ + L+AC+ G
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIF 477
L G ++L+K + P + ++D+ + G+++ A + + M E W ++
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Query: 478 GYGLH 482
+H
Sbjct: 439 ACRMH 443
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/640 (35%), Positives = 354/640 (55%), Gaps = 15/640 (2%)
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+ ++ Y + +R+ A +FDEMP RD V+WN++I+G V + ++++F +M V
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV 129
Query: 199 VDSTTVVTVLPA--VAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTAR 256
+ V + V + + L M + +D +V Y + G + A
Sbjct: 130 SWTAMVNGCFRSGKVDQAERLFYQMPV----------KDTAAWNSMVHGYLQFGKVDDAL 179
Query: 257 LLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFG 316
LF + ++I++ MI G N ++ LF+ +L + +S +I +
Sbjct: 180 KLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAP 239
Query: 317 HLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMIS 376
H+ + G +K G + VS +L T Y+ I +RK+FDE + VA W A++S
Sbjct: 240 AFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLS 299
Query: 377 GYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
GY+ N E ALS+F M+ PN T + L++C+ LG+L +GK +H + LE
Sbjct: 300 GYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET 359
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML 496
+ +V +L+ MY+ GN+++A +F + +K+ V+WN+II G HG G A +F +M+
Sbjct: 360 DAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMI 419
Query: 497 HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYR-IEPLAEHHACMVDILGRAGQ 555
P +TF +L ACSH G + +G ++F+ M + I+ +H+ CMVDILGR G+
Sbjct: 420 RLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGK 479
Query: 556 LEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNI 615
L++A E I M V+P VW LL AC++H + D A+ +F LD S YVLLSNI
Sbjct: 480 LKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNI 539
Query: 616 YSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKL 675
Y+ + + +R KK + K PG + + I G H F SGD+ H + IY LE L
Sbjct: 540 YASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFL 597
Query: 676 TGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVC 735
K++E+GY + ++LHDVE+E+KE M+ HSE+LAIAF LI T G+ + ++KNLRVC
Sbjct: 598 REKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVC 657
Query: 736 LDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
DCHT K IS + R IV+RD RFHHFK+G CSCGDYW
Sbjct: 658 EDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 183/440 (41%), Gaps = 40/440 (9%)
Query: 35 DLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLR 94
D A+ + FG A LF + ++ + ++ G N ++ L+ ++
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNM- 216
Query: 95 LRTNLAPDNYTYAFTIAA---SPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRV 151
LR + + + I A +P G+ +H I GF +V +SL+ Y R+
Sbjct: 217 LRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRI 276
Query: 152 GLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAV 211
G +RKVFDE W +++G N ++D++ +F M+ N + + +T + L +
Sbjct: 277 GDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSC 336
Query: 212 AELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYN 271
+ L L G + +A K G DA+V LV +YS G+++ A +F I K ++++N
Sbjct: 337 SALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN 396
Query: 272 AMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKS 331
++I G +G + + +F +++ + T GL+ S G L + Y
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY---- 452
Query: 332 GAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLF 391
+ S +N ID + + + M+ + G + A L
Sbjct: 453 --------------MSSGINHID-----------RKIQHYTCMVDILGRCGKLKEAEELI 487
Query: 392 QEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI-DMYAK 450
+ M+ PN + LSAC + G+ I NL+ + L+ ++YA
Sbjct: 488 ERMVV---KPNEMVWLALLSACRMHSDVDRGEKAAAAI--FNLDSKSSAAYVLLSNIYAS 542
Query: 451 CGNISEARQLFDSMSEKNTV 470
G S +L M +KN +
Sbjct: 543 AGRWSNVSKLRVKM-KKNGI 561
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 338 SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT 397
S+ T + T Y+R N + A LFDE P + V +WN+MISG + G TA+ LF EM
Sbjct: 67 SLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPER 126
Query: 398 EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
V+ T ++ C + G + + + + K+ +++ Y + G + +A
Sbjct: 127 SV----VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA----AWNSMVHGYLQFGKVDDA 178
Query: 458 RQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHA 517
+LF M KN ++W T+I G + EAL LFK ML I + F ++ AC++A
Sbjct: 179 LKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Query: 518 GLVREGEEIFHDMVNK 533
G ++ H ++ K
Sbjct: 239 PAFHMGIQV-HGLIIK 253
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 8/144 (5%)
Query: 352 EIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
ID AR++F++ P V+ + MI+GYT++ AL+LF EM + V+ + +S
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----VSWNSMIS 105
Query: 412 ACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVT 471
C + G ++ + + E ++ TA+++ + G + +A +LF M K+T
Sbjct: 106 GCVECGDMNTAVKLFDEMP----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAA 161
Query: 472 WNTIIFGYGLHGYGHEALKLFKEM 495
WN+++ GY G +ALKLFK+M
Sbjct: 162 WNSMVHGYLQFGKVDDALKLFKQM 185
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 20/156 (12%)
Query: 436 PNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM 495
P++ + T +I Y + + +A LFD M ++ V+WN++I G G + A+KLF EM
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 496 LHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHA--CMVDILGRA 553
+ V++ +++ C +G V + E +F+ M P+ + A MV +
Sbjct: 124 PERSV----VSWTAMVNGCFRSGKVDQAERLFYQM-------PVKDTAAWNSMVHGYLQF 172
Query: 554 GQLEKALEFIRTMPVEPGPAV--WGTLLGACKIHKN 587
G+++ AL+ + M PG V W T++ C + +N
Sbjct: 173 GKVDDALKLFKQM---PGKNVISWTTMI--CGLDQN 203
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/760 (32%), Positives = 377/760 (49%), Gaps = 111/760 (14%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPE------------------ 163
+H + I GF + + L+D+Y K S + AR++FDE+ E
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 164 ---------------RDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVL 208
RDTV +N +ITG N +I +F M G + D+ T +VL
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 209 PAVAELQELGVGMGIQCLAF-----KFGFHRDAYVLTGLVSLYSKCGD----ISTAR--- 256
+A L QC+ F K G V LVS+YSKC + +AR
Sbjct: 156 AGLA----LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 257 -----------------------------LLFGMIGKPDLIAYNAMISGYTCNGEIESSV 287
LL GM L+AYNAMISGY G + ++
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY 347
++ R ++ SG + T +I + G L L + Y ++ S +L ++Y
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLVSLY 330
Query: 348 SRLNEIDMARKLFDESPEKTVAAWNAMISGY----------------------------- 378
+ + D AR +F++ P K + +WNA++SGY
Sbjct: 331 YKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390
Query: 379 --TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
+NG E L LF M F P + + +CA LG+ G+ H + +
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDS 450
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML 496
++ ALI MYAKCG + EARQ+F +M ++V+WN +I G HG+G EA+ +++EML
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEML 510
Query: 497 HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQL 556
GI P +T L++L ACSHAGLV +G + F M YRI P A+H+A ++D+L R+G+
Sbjct: 511 KKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKF 570
Query: 557 EKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIY 616
A I ++P +P +W LL C++H N ++ +A+++LF L P G Y+LLSN++
Sbjct: 571 SDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMH 630
Query: 617 SVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLT 676
+ + + A +R++ + R + K C+ IE+ H F+ D SH A A+Y L+ L
Sbjct: 631 AATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLG 690
Query: 677 GKMREIGYQTETVTSLHDVEEE-EKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVC 735
+MR +GY +T LHDVE + KE M+ HSEK+A+AF L+ PGT IRI KNLR C
Sbjct: 691 KEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTC 750
Query: 736 LDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
DCH +F+S + +R I++RD RFHHF++G CSCG++W
Sbjct: 751 GDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 187 bits (474), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 231/494 (46%), Gaps = 81/494 (16%)
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA----SPDDKYGML 121
D ++N ++ GFS N S+I L+ ++ PDN+T+A +A + D+K +
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMK-HEGFKPDNFTFASVLAGLALVADDEKQCVQ 170
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKF----SRVGLARKVFDEMPERDTVAWNTVITGLV 177
HA A+ G G V ++LV +Y K S + ARKVFDE+ E+D +W T++TG V
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 178 RNCYYD--------------------------------DSIQVFRDMVANGVQVDSTTVV 205
+N Y+D +++++ R MV++G+++D T
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 206 TVLPAVAELQELGVGMGIQCLAFK---FGFHRDAYVLTGLVSLYSKCGDISTARLLFGMI 262
+V+ A A L +G + + F FH D LVSLY KCG AR +F +
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKM 346
Query: 263 GKPDLIAYNAMISGYTCNGEIESSVKLFREL----------LVSG-----------QRVS 301
DL+++NA++SGY +G I + +F+E+ ++SG + S
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQG-YC---------VKSGAISNSSVSTALTTIYSRLN 351
G P F +C++ G YC +K G S+ S AL T+Y++
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Query: 352 EIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
++ AR++F P +WNA+I+ Q+G A+ +++EM+ P+ +T+ T L+
Sbjct: 467 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Query: 412 ACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
AC+ G + G K+ + + P LID+ + G S+A + +S+ K T
Sbjct: 527 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 586
Query: 471 T-WNTIIFGYGLHG 483
W ++ G +HG
Sbjct: 587 EIWEALLSGCRVHG 600
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 119/279 (42%), Gaps = 11/279 (3%)
Query: 117 KYGMLLHAHAIVDGF-GSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITG 175
K G A AI + +L ++L+ Y +G A+ +F EM E++ ++W +I+G
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
L N + ++ +++F M G + + + A L G K GF
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
L+++Y+KCG + AR +F + D +++NA+I+ +G +V ++ E+L
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 296 SGQRVSSSTMVGLIPVSS-----PFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRL 350
G R T++ ++ S G + Y + GA + L + R
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR----LIDLLCRS 567
Query: 351 NEIDMARKLFDESPEKTVAA-WNAMISGYTQNGLTETAL 388
+ A + + P K A W A++SG +G E +
Sbjct: 568 GKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/678 (34%), Positives = 363/678 (53%), Gaps = 41/678 (6%)
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVF---- 189
NLF ++L+ Y K + F+++P+RD V WN +I G + +++ +
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 190 RDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG--LVSLYS 247
RD AN +V T++T+L + + +G I K GF ++Y+L G L+ +Y+
Sbjct: 131 RDFSANLTRV---TLMTMLKLSSSNGHVSLGKQIHGQVIKLGF--ESYLLVGSPLLYMYA 185
Query: 248 KCGDISTARLLF---------------------GMIG---------KPDLIAYNAMISGY 277
G IS A+ +F GMI + D +++ AMI G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 278 TCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNS 337
NG + +++ FRE+ V G ++ ++P G ++ I +++ +
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 338 SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT 397
V +AL +Y + + A+ +FD +K V +W AM+ GY Q G E A+ +F +M +
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 398 EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
P+ T+ +SACA + SL G H + L + VS +L+ +Y KCG+I ++
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 458 RQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHA 517
+LF+ M+ ++ V+W ++ Y G E ++LF +M+ G+ P GVT ++ ACS A
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
Query: 518 GLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGT 577
GLV +G+ F M ++Y I P H++CM+D+ R+G+LE+A+ FI MP P W T
Sbjct: 486 GLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTT 545
Query: 578 LLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKL 637
LL AC+ N +I + A+E L ELDP Y LLS+IY+ + A +R +++ +
Sbjct: 546 LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605
Query: 638 AKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEE 697
K PG + I+ G H F + D S + IYA LE+L K+ + GY+ +T HDVEE
Sbjct: 606 KKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEE 665
Query: 698 EEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRD 757
K M+N HSE+LAIAF LI G IR+ KNLRVC+DCH ATK IS +T R I+VRD
Sbjct: 666 AVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRD 725
Query: 758 ANRFHHFKDGICSCGDYW 775
A RFH FKDG CSCGD+W
Sbjct: 726 AVRFHRFKDGTCSCGDFW 743
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 237/521 (45%), Gaps = 44/521 (8%)
Query: 33 QSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALY-T 91
Q +L S L G + F + + D +NVL++G+S++ +++ Y T
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 92 HLR-LRTNLAPDNYTYAFTIAASPDD-KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFS 149
+R NL +++S G +H I GF S L V S L+ +Y
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 150 RVGLARKVFDEMPER------------------------------DTVAWNTVITGLVRN 179
+ A+KVF + +R D+V+W +I GL +N
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248
Query: 180 CYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVL 239
++I+ FR+M G+++D +VLPA L + G I + F YV
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 240 TGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR 299
+ L+ +Y KC + A+ +F + + +++++ AM+ GY G E +VK+F ++ SG
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 300 VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKL 359
T+ I + L G + SG I +VS +L T+Y + +ID + +L
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 360 FDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSL 419
F+E + +W AM+S Y Q G + LF +M+ P+ VT+T +SAC++ G +
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 420 SFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIF 477
G+ +L+ S+ + P+I + +ID++++ G + EA + + M + + W T++
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 478 GYGLHGYGHEALKLFKEMLHSGI-----HPSGVTFLSILYA 513
G L++ K S I HP+G T LS +YA
Sbjct: 549 ACRNKG----NLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/663 (33%), Positives = 364/663 (54%), Gaps = 4/663 (0%)
Query: 117 KYGMLLHAHAIVDGFGS---NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVI 173
+ G +HAH IV S + + +SL++LY K ARK+FD MPER+ V+W ++
Sbjct: 48 RIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMM 107
Query: 174 TGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVL-PAVAELQELGVGMGIQCLAFKFGF 232
G + + + +++F+ M +G + V TV+ + + + G K+G
Sbjct: 108 KGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGL 167
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
+V LV +YS C A + + DL +++ +SGY G + + + R+
Sbjct: 168 ISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRK 227
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
++ T + + + S L+L + V+ G + AL +Y + +
Sbjct: 228 TANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGK 287
Query: 353 IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
+ A+++FD++ + + ++ Y Q+ E AL+LF +M T E PN T L++
Sbjct: 288 VLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNS 347
Query: 413 CAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTW 472
A+L L G +H L+ ++ V AL++MYAK G+I +AR+ F M+ ++ VTW
Sbjct: 348 IAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTW 407
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVN 532
NT+I G HG G EAL+ F M+ +G P+ +TF+ +L ACSH G V +G F+ ++
Sbjct: 408 NTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMK 467
Query: 533 KYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIAR 592
K+ ++P +H+ C+V +L +AG + A +F+RT P+E W TLL AC + +N + +
Sbjct: 468 KFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGK 527
Query: 593 VASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTT 652
+E E P G YVLLSNI++ R + A +R + R + K PG + I I T
Sbjct: 528 KVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQT 587
Query: 653 HVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLA 712
HVF++ D H T IYA ++++ K++ +GY + + HDV+EE++E ++ HSEKLA
Sbjct: 588 HVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLA 647
Query: 713 IAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCG 772
+A+ LI T + + + KN+R+C DCH+A K ISKI++R IV+RD+NRFHHF DG CSC
Sbjct: 648 VAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCC 707
Query: 773 DYW 775
DYW
Sbjct: 708 DYW 710
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 102/202 (50%)
Query: 115 DDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVIT 174
D + +H+ + GF + + C +L+++Y K +V A++VFD+ ++ T++
Sbjct: 252 DLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMD 311
Query: 175 GLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHR 234
++ +++++ +F M V + T +L ++AEL L G + L K G+
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371
Query: 235 DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
V LV++Y+K G I AR F + D++ +N MISG + +G +++ F ++
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431
Query: 295 VSGQRVSSSTMVGLIPVSSPFG 316
+G+ + T +G++ S G
Sbjct: 432 FTGEIPNRITFIGVLQACSHIG 453
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 317/545 (58%), Gaps = 33/545 (6%)
Query: 264 KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ--RVSSSTMVGLIPVSSPFGHLHLT 321
KP L A N+MI + + E S +R +L SG + + T+ L+ +
Sbjct: 68 KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETG 127
Query: 322 CSIQGYCVKSGAISNSSVSTALTTIYSRLNEID--------------------------- 354
+ G ++ G ++ V T L ++Y+ L +D
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 355 ----MARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
ARKLF+ PE+ AWNAMISGY Q G + AL++F M N V + + L
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
SAC QLG+L G+W H I+ ++ + ++T L+D+YAKCG++ +A ++F M EKN
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
TW++ + G ++G+G + L+LF M G+ P+ VTF+S+L CS G V EG+ F M
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 531 VNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDI 590
N++ IEP EH+ C+VD+ RAG+LE A+ I+ MP++P AVW +LL A +++KN ++
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLEL 427
Query: 591 ARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEING 650
+AS+++ EL+ + G YVLLSNIY+ ++ + +R+ K + + K PGC+++E+NG
Sbjct: 428 GVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNG 487
Query: 651 TTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEK 710
H F GD+SH T I A+ + ++ ++R GY+ +T + D++EEEKE + +HSEK
Sbjct: 488 EVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEK 547
Query: 711 LAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICS 770
AIAF +++ + IRI+KNLRVC DCH + ISKI R I+VRD NRFHHFKDG CS
Sbjct: 548 AAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCS 607
Query: 771 CGDYW 775
C +W
Sbjct: 608 CNGFW 612
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 167/358 (46%), Gaps = 35/358 (9%)
Query: 154 ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG--VQVDSTTVVTVLPAV 211
A ++ D + A N++I ++ + S +R ++++G ++ D+ TV ++ A
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 212 AELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYS------------------------ 247
L+ G+ + + + GF D +V TGL+SLY+
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 248 -------KCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRV 300
+CGD+ AR LF + + D IA+NAMISGY GE ++ +F + + G +V
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 301 SSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF 360
+ M+ ++ + G L Y ++ ++T L +Y++ +++ A ++F
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 361 DESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLS 420
EK V W++ ++G NG E L LF M TPN VT + L C+ +G +
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 421 FGKWVHQLIKSK-NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTII 476
G+ ++++ +EP + L+D+YA+ G + +A + M K + W++++
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 199/505 (39%), Gaps = 80/505 (15%)
Query: 2 IQRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQK--LFDFGATRHARALF 59
I ++ I ++ + QIHA+L ++G D + + L D +A +
Sbjct: 4 IGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQIL 63
Query: 60 FSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTN-LAPDNYTYAFTIAASPD--- 115
P +F N +++ + P S Y + N L PDNYT F + A
Sbjct: 64 DRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRM 123
Query: 116 DKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKF--------------------------- 148
+ G+ +H I GF ++ V + L+ LY +
Sbjct: 124 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTA 183
Query: 149 -SRVG---LARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTV 204
+R G ARK+F+ MPERD +AWN +I+G + +++ VF M GV+V+ +
Sbjct: 184 CARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAM 243
Query: 205 VTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK 264
++VL A +L L G + + T LV LY+KCGD+ A +F + +
Sbjct: 244 ISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 265 PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSI 324
++ +++ ++G NG E ++LF S G+ P + F + CS+
Sbjct: 304 KNVYTWSSALNGLAMNGFGEKCLELF----------SLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 325 QGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLT 384
G+ V G D R F P+ + + ++ Y + G
Sbjct: 354 VGF-VDEGQ-----------------RHFDSMRNEFGIEPQ--LEHYGCLVDLYARAGRL 393
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE---PNIYVS 441
E A+S+ Q+M P+ ++ L A +L G L K LE N
Sbjct: 394 EDAVSIIQQM---PMKPHAAVWSSLLHASRMYKNLELG----VLASKKMLELETANHGAY 446
Query: 442 TALIDMYAKCG---NISEARQLFDS 463
L ++YA N+S RQ S
Sbjct: 447 VLLSNIYADSNDWDNVSHVRQSMKS 471
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 35/260 (13%)
Query: 353 IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT--EFTPNPVTITTTL 410
+D A ++ D S + T+ A N+MI + ++ + E + ++ ++++ + P+ T+ +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMY---------------------- 448
AC L G VH + + + + +V T LI +Y
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 449 ---------AKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
A+CG++ AR+LF+ M E++ + WN +I GY G EAL +F M G
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 500 IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
+ +GV +S+L AC+ G + +G H + + +I+ +VD+ + G +EKA
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWA-HSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 560 LEFIRTMPVEPGPAVWGTLL 579
+E M E W + L
Sbjct: 295 MEVFWGME-EKNVYTWSSAL 313
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/577 (36%), Positives = 326/577 (56%), Gaps = 3/577 (0%)
Query: 202 TTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGM 261
V +++ AV + + + C K +R ++ LV Y + G A LF
Sbjct: 32 ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 262 IGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS--GQRVSSSTMVGLIPVSSPFGHLH 319
+ + DL+++N++ISGY+ G + ++ +++S G R + T + +I G
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 320 LTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYT 379
I G +K G + V A Y + ++ + KLF++ K + +WN MI +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 380 QNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIY 439
QNGL E L+ F P+ T L +C +G + + +H LI N
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
++TAL+D+Y+K G + ++ +F ++ +++ W ++ Y HG+G +A+K F+ M+H G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 500 IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
I P VTF +L ACSH+GLV EG+ F M +YRI+P +H++CMVD+LGR+G L+ A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 560 LEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVG 619
I+ MP+EP VWG LLGAC+++K+T + A+ERLFEL+P YV+LSNIYS
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 620 RNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKM 679
+ A+ IR + K++ L + GC+ IE H FV GD SH + I L+++ KM
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
Query: 680 R-EIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDC 738
+ E+GY+++T LHDV E+ KE M+N HSEK+A+AF L+ P I I KNLR+C DC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571
Query: 739 HTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
H K IS I +R I++RD+ RFHHF DG CSC DYW
Sbjct: 572 HETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 4/360 (1%)
Query: 121 LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNC 180
LLH + + F+ LV Y + A K+FDEMPERD V+WN++I+G
Sbjct: 52 LLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRG 111
Query: 181 YYDDSIQVFRDMVAN--GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
Y +V M+ + G + + T ++++ A G I L KFG + V
Sbjct: 112 YLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKV 171
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
+ ++ Y K GD++++ LF + +L+++N MI + NG E + F G
Sbjct: 172 VNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGH 231
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+T + ++ G + L I G + G N ++TAL +YS+L ++ +
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSST 291
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
+F E AW AM++ Y +G A+ F+ M+ +P+ VT T L+AC+ G
Sbjct: 292 VFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGL 351
Query: 419 LSFGK-WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTII 476
+ GK + + K ++P + + ++D+ + G + +A L M E ++ W ++
Sbjct: 352 VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 187/461 (40%), Gaps = 45/461 (9%)
Query: 15 CNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLV 74
C L H + + +G+ D +L G A LF + D+ +N L+
Sbjct: 50 CRLLHCKVVKSVSYRHGFIGD-----QLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLI 104
Query: 75 KGFSVNASPSSSIALYTHLRL-RTNLAPDNYTYAFTIAA---SPDDKYGMLLHAHAIVDG 130
G+S + + + + P+ T+ I+A + G +H + G
Sbjct: 105 SGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFG 164
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFR 190
+ V ++ ++ Y K + + K+F+++ ++ V+WNT+I ++N + + F
Sbjct: 165 VLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN 224
Query: 191 DMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
G + D T + VL + ++ + + GI L GF + + T L+ LYSK G
Sbjct: 225 MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLG 284
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
+ + +F I PD +A+ AM++ Y +G ++K F EL+V G+ P
Sbjct: 285 RLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF-ELMVH---------YGISP 334
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA 370
F HL CS G V+ G ++S I RL+
Sbjct: 335 DHVTFTHLLNACSHSGL-VEEGKHYFETMSKRY-RIDPRLDH------------------ 374
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLI 429
++ M+ ++GL + A L +EM P+ L AC G K +L
Sbjct: 375 YSCMVDLLGRSGLLQDAYGLIKEM---PMEPSSGVWGALLGACRVYKDTQLGTKAAERLF 431
Query: 430 KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
+ + + YV L ++Y+ G +A ++ + M +K V
Sbjct: 432 ELEPRDGRNYV--MLSNIYSASGLWKDASRIRNLMKQKGLV 470
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/586 (37%), Positives = 337/586 (57%), Gaps = 51/586 (8%)
Query: 235 DAYVLTGLVSLYSKCGDIST----------ARLLFGMIGKPDLIAYNAMISGYTCNGEIE 284
D +V + L++L C D ST A +F I P+L +N +I ++ E
Sbjct: 43 DVFVASRLLAL---CVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPS 99
Query: 285 SSVKLFRELLVSGQRVSSSTMVGLIPVSSP----------------FG------------ 316
+ + ++L S + T LI SS FG
Sbjct: 100 KAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLV 159
Query: 317 HLHLTCSIQGYCVKSGAI------SNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA 370
H++ C G+ +G I + T++ Y + ++ AR++FDE P + +
Sbjct: 160 HMYANC---GFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFT 216
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIK 430
W+ MI+GY +N E A+ LF+ M N + + +S+CA LG+L FG+ ++ +
Sbjct: 217 WSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVV 276
Query: 431 SKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALK 490
++ N+ + TAL+DM+ +CG+I +A +F+ + E ++++W++II G +HG+ H+A+
Sbjct: 277 KSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMH 336
Query: 491 LFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDIL 550
F +M+ G P VTF ++L ACSH GLV +G EI+ +M + IEP EH+ C+VD+L
Sbjct: 337 YFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDML 396
Query: 551 GRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYV 610
GRAG+L +A FI M V+P + G LLGACKI+KNT++A L ++ P GYYV
Sbjct: 397 GRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYV 456
Query: 611 LLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSG-DRSHSHATAIY 669
LLSNIY+ + K S+R++ K++ + K PG +LIEI+G + F G D+ H I
Sbjct: 457 LLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIR 516
Query: 670 AMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRII 729
E++ GK+R IGY+ T + DV+EEEKE +++HSEKLAIA+ ++ T+PGT IRI+
Sbjct: 517 RKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIV 576
Query: 730 KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
KNLRVC DCHT TK IS++ R ++VRD NRFHHF++G+CSC DYW
Sbjct: 577 KNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 173/384 (45%), Gaps = 34/384 (8%)
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFK--FSRVGLARKVFDEMPERDTVAWNTVITG 175
+G LL H I D F ++ + + D F + +G A +F ++ + +N +I
Sbjct: 32 HGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRC 91
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
+ + M+ + + D+ T ++ A +E++ + VG +FGF D
Sbjct: 92 FSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQND 151
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL-- 293
YV LV +Y+ CG I+ A +FG +G D++++ +M++GY G +E++ ++F E+
Sbjct: 152 VYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPH 211
Query: 294 --------LVSGQR---------------------VSSSTMVGLIPVSSPFGHLHLTCSI 324
+++G + + MV +I + G L
Sbjct: 212 RNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERA 271
Query: 325 QGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLT 384
Y VKS N + TAL ++ R +I+ A +F+ PE +W+++I G +G
Sbjct: 272 YEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHA 331
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ-LIKSKNLEPNIYVSTA 443
A+ F +M++ F P VT T LSAC+ G + G +++ + K +EP +
Sbjct: 332 HKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGC 391
Query: 444 LIDMYAKCGNISEARQLFDSMSEK 467
++DM + G ++EA M K
Sbjct: 392 IVDMLGRAGKLAEAENFILKMHVK 415
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 193/449 (42%), Gaps = 71/449 (15%)
Query: 54 HARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS 113
+A +F ++NP++F+FN+L++ FS A PS + YT + L++ + PDN T+ F I AS
Sbjct: 69 YAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQM-LKSRIWPDNITFPFLIKAS 127
Query: 114 PDDK---YGMLLHAHAIVDGFGSNLFVCSSLVDLYFK----------FSRVGL------- 153
+ + G H+ + GF ++++V +SLV +Y F ++G
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 154 --------------ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQV 199
AR++FDEMP R+ W+ +I G +N ++ +I +F M GV
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 200 DSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF 259
+ T +V+V+ + A L L G K + + T LV ++ +CGDI A +F
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 260 GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 319
+ + D ++++++I G +G ++ F +++ +G IP F +
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMIS----------LGFIPRDVTFTAVL 357
Query: 320 LTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYT 379
CS G V+ G IY + + D E + + ++
Sbjct: 358 SACS-HGGLVEKG-----------LEIYENMKK--------DHGIEPRLEHYGCIVDMLG 397
Query: 380 QNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV-HQLIKSKNLEPNI 438
+ G A + +M PN + L AC + + V + LIK K
Sbjct: 398 RAGKLAEAENFILKM---HVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGY 454
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMSEK 467
YV L ++YA G + L D M EK
Sbjct: 455 YV--LLSNIYACAGQWDKIESLRDMMKEK 481
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 35 DLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLR 94
D+ S T + G +AR +F + + ++F +++++ G++ N +I L+ ++
Sbjct: 182 DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241
Query: 95 LRTNLAPDNYTYAFTIAASPDD----KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSR 150
+A N T ++ +S ++G + + + NL + ++LVD++++
Sbjct: 242 REGVVA--NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGD 299
Query: 151 VGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPA 210
+ A VF+ +PE D+++W+++I GL + + ++ F M++ G T VL A
Sbjct: 300 IEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSA 359
Query: 211 VA 212
+
Sbjct: 360 CS 361
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/754 (30%), Positives = 393/754 (52%), Gaps = 3/754 (0%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
QI Q++ +G +S LA L L G +A +F + D +N + ++ N
Sbjct: 164 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 223
Query: 82 SPSSSIALYTHLR-LRTNLAPDNYTYAFTIAASPD-DKYGMLLHAHAIVDGFGSNLFVCS 139
S +++ +R + + ++ D K+G +H + GF S + VC+
Sbjct: 224 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 283
Query: 140 SLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQV 199
+L+ +Y R A VF +MP +D ++WN+++ V + D++ + M+++G V
Sbjct: 284 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 343
Query: 200 DSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF 259
+ T + L A G + L G + + LVS+Y K G++S +R +
Sbjct: 344 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 260 GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS-PFGHL 318
+ + D++A+NA+I GY + + + ++ F+ + V G + T+V ++ P L
Sbjct: 404 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 463
Query: 319 HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGY 378
+ Y V +G S+ V +L T+Y++ ++ ++ LF+ + + WNAM++
Sbjct: 464 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 523
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
+G E L L +M + + + + + LSA A+L L G+ +H L E +
Sbjct: 524 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 583
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS 498
++ A DMY+KCG I E ++ ++ +WN +I G HGY E F EML
Sbjct: 584 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 643
Query: 499 GIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEK 558
GI P VTF+S+L ACSH GLV +G + + + +EP EH C++D+LGR+G+L +
Sbjct: 644 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 703
Query: 559 ALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSV 618
A FI MP++P VW +LL +CKIH N D R A+E L +L+P YVL SN+++
Sbjct: 704 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 763
Query: 619 GRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGK 678
+ ++R+ + + K C+ +++ F GDR+H IYA LE +
Sbjct: 764 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 823
Query: 679 MREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDC 738
++E GY +T +L D +EE+KE + HSE+LA+A+AL++T G+ +RI KNLR+C DC
Sbjct: 824 IKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDC 883
Query: 739 HTATKFISKITERVIVVRDANRFHHFKDGICSCG 772
H+ KF+S++ R IV+RD RFHHF+ G+ G
Sbjct: 884 HSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 283/600 (47%), Gaps = 13/600 (2%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q+H + +G SD+ T + +G +R +F + + ++ + L+ G+S
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYGMLLHAHAIVDGFGSNLFVC 138
P I +Y +R + + + + I++ D+ G + + G S L V
Sbjct: 123 EPEEVIDIYKGMR-GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+SL+ + V A +FD+M ERDT++WN++ +N + ++S ++F M +
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
V+STTV T+L + + G GI L K GF V L+ +Y+ G A L+
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 259 FGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHL 318
F + DLI++N++++ + +G ++ L ++ SG+ V+ T +
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361
Query: 319 HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGY 378
+ G V SG N + AL ++Y ++ E+ +R++ + P + V AWNA+I GY
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 421
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS-LSFGKWVHQLIKSKNLEPN 437
++ + AL+ FQ M + N +T+ + LSAC G L GK +H I S E +
Sbjct: 422 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481
Query: 438 IYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH 497
+V +LI MYAKCG++S ++ LF+ + +N +TWN ++ HG+G E LKL +M
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541
Query: 498 SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLE 557
G+ +F L A + ++ EG+++ H + K E + D+ + G++
Sbjct: 542 FGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600
Query: 558 KALEFIRTMP--VEPGPAVWGTLLGACKIHKNTDIARVASERLFEL--DPGSVGYYVLLS 613
E ++ +P V W L+ A H + + E+ PG V + LL+
Sbjct: 601 ---EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLT 657
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 219/469 (46%), Gaps = 1/469 (0%)
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
+ G+ +H G S+++V ++++ LY + V +RKVF+EMP+R+ V+W +++ G
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
++ I +++ M GV + ++ V+ + L++ +G I K G
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
V L+S+ G++ A +F + + D I++N++ + Y NG IE S ++F +
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
V+S+T+ L+ V H I G VK G S V L +Y+ A
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
+F + P K + +WN++++ + +G + AL L M+++ + N VT T+ L+AC
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTII 476
G+ +H L+ L N + AL+ MY K G +SE+R++ M ++ V WN +I
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 418
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
GY +AL F+ M G+ + +T +S+L AC G + E + H +
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 478
Query: 537 EPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH 585
E ++ + + G L + + + W +L A H
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH 526
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 5/436 (1%)
Query: 161 MPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVG 220
MP R+ V+WNT+++G+VR Y + ++ FR M G++ S + +++ A +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSM-FR 59
Query: 221 MGIQCLAF--KFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYT 278
G+Q F K G D YV T ++ LY G +S +R +F + +++++ +++ GY+
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 279 CNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSS 338
GE E + +++ + G + ++M +I L I G VKSG S +
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 339 VSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE 398
V +L ++ + +D A +FD+ E+ +WN++ + Y QNG E + +F M
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 399 FTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEAR 458
N T++T LS + +G+ +H L+ + + V L+ MYA G EA
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 459 QLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAG 518
+F M K+ ++WN+++ + G +AL L M+ SG + VTF S L AC
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 519 LVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTL 578
+G I H +V + +V + G+ G++ ++ + MP A W L
Sbjct: 360 FFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA-WNAL 417
Query: 579 LGACKIHKNTDIARVA 594
+G ++ D A A
Sbjct: 418 IGGYAEDEDPDKALAA 433
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 187/429 (43%), Positives = 281/429 (65%)
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
Y RL + AR LFD+ +++V +WN MISGY+ NG + A+ +F+EM + PN VT+
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 407 TTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE 466
+ L A ++LGSL G+W+H + + + + +ALIDMY+KCG I +A +F+ +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 467 KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
+N +TW+ +I G+ +HG +A+ F +M +G+ PS V ++++L ACSH GLV EG
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 527 FHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHK 586
F MV+ +EP EH+ CMVD+LGR+G L++A EFI MP++P +W LLGAC++
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 587 NTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLI 646
N ++ + + L ++ P G YV LSN+Y+ N+ + + +R K++ + K PGC+LI
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Query: 647 EINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNV 706
+I+G H FV D SH A I +ML +++ K+R GY+ T L ++EEE+KE +++
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHY 577
Query: 707 HSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKD 766
HSEK+A AF LI+T PG IRI+KNLR+C DCH++ K ISK+ +R I VRD RFHHF+D
Sbjct: 578 HSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQD 637
Query: 767 GICSCGDYW 775
G CSC DYW
Sbjct: 638 GSCSCMDYW 646
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 192/414 (46%), Gaps = 57/414 (13%)
Query: 154 ARKVFDEMPERDTVAWNTVITGLVRNCYYDD-----SIQVFRDMVANG-VQVDSTTVVTV 207
A K+F++MP+R+ +WNT+I G + D+ +I +F +M+++ V+ + T +V
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSES---DEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 208 LPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG----------------- 250
L A A+ ++ G I LA K+GF D +V++ LV +Y CG
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 251 ----------------------------DISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
D AR+LF + + ++++N MISGY+ NG
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA 342
+ +V++FRE+ R + T+V ++P S G L L + Y SG + + +A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 343 LTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
L +YS+ I+ A +F+ P + V W+AMI+G+ +G A+ F +M P+
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 403 PVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
V L+AC+ G + G ++ Q++ LEP I ++D+ + G + EA +
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 462 DSMSEK-NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGV-TFLSILYA 513
+M K + V W ++ + G ++ ++ H SG LS +YA
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYA 488
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 221/519 (42%), Gaps = 102/519 (19%)
Query: 11 INKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATR--------HARALFFSV 62
IN + L+QIHA I +G D T ++ F AT +A +F +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRD----TLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTN--LAPDNYTYAFTIAASPDD---K 117
+ F +N +++GFS + + IA+ + ++ + P+ +T+ + A +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLV----------------------------------- 142
G +H A+ GFG + FV S+LV
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 143 ----------DLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDM 192
D Y + AR +FD+M +R V+WNT+I+G N ++ D+++VFR+M
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
++ + T+V+VLPA++ L L +G + A G D + + L+ +YSKCG I
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 253 STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS 312
A +F + + ++I ++AMI+G+ +G+ ++ F ++ +G R S + L
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL---- 381
Query: 313 SPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWN 372
LT G V+ G +S++ +D E + +
Sbjct: 382 -------LTACSHGGLVEEG-----------RRYFSQMVSVD--------GLEPRIEHYG 415
Query: 373 AMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK 432
M+ ++GL + A M P+ V L AC G++ GK V ++
Sbjct: 416 CMVDLLGRSGLLDEAEEFILNM---PIKPDDVIWKALLGACRMQGNVEMGKRVANIL--M 470
Query: 433 NLEPN---IYVSTALIDMYAKCGNISEARQLFDSMSEKN 468
++ P+ YV AL +MYA GN SE ++ M EK+
Sbjct: 471 DMVPHDSGAYV--ALSNMYASQGNWSEVSEMRLRMKEKD 507
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 158/348 (45%), Gaps = 62/348 (17%)
Query: 323 SIQGYCVKSGAISNSSVST------ALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMIS 376
I +KSG + ++ + A + ++ R ++D A K+F++ P++ +WN +I
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 377 GYTQNGLTET--ALSLFQEMMTTEFT-PNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN 433
G++++ + A++LF EMM+ EF PN T + L ACA+ G + GK +H L
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 434 LEPNIYVSTALIDMYAKCGNISE------------------------------------- 456
+ +V + L+ MY CG + +
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 457 --------ARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFL 508
AR LFD M +++ V+WNT+I GY L+G+ +A+++F+EM I P+ VT +
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLV 278
Query: 509 SILYACSHAGLVREGEEI-FHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP 567
S+L A S G + GE + + + RI+ + + ++D+ + G +EKA+ +P
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL--GSALIDMYSKCGIIEKAIHVFERLP 336
Query: 568 VEPGPAVWGTLLGACKIHKNTD--IARVASERLFELDPGSVGYYVLLS 613
E W ++ IH I R + P V Y LL+
Sbjct: 337 RE-NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 329/572 (57%), Gaps = 2/572 (0%)
Query: 206 TVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKP 265
+L A + + L G + K + Y+ T L+ Y KC + AR + + +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 266 DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQ 325
+++++ AMIS Y+ G ++ +F E++ S + + T ++ L L I
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 326 GYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTE 385
G VK S+ V ++L +Y++ +I AR++F+ PE+ V + A+I+GY Q GL E
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 386 TALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI 445
AL +F + + +PN VT + L+A + L L GK H + + L + +LI
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296
Query: 446 DMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML-HSGIHPSG 504
DMY+KCGN+S AR+LFD+M E+ ++WN ++ GY HG G E L+LF+ M + P
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 505 VTFLSILYACSHAGLVREGEEIFHDMV-NKYRIEPLAEHHACMVDILGRAGQLEKALEFI 563
VT L++L CSH + G IF MV +Y +P EH+ C+VD+LGRAG++++A EFI
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
Query: 564 RTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFP 623
+ MP +P V G+LLGAC++H + DI RL E++P + G YV+LSN+Y+ +
Sbjct: 417 KRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWA 476
Query: 624 KAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIG 683
++R + ++ + K PG + I+ T H F + DR+H + A +++++ KM++ G
Sbjct: 477 DVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAG 536
Query: 684 YQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATK 743
Y + L+DV+EE+KE M+ HSEKLA+ F LI T G IR+ KNLR+C+DCH K
Sbjct: 537 YVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAK 596
Query: 744 FISKITERVIVVRDANRFHHFKDGICSCGDYW 775
SK+ ER + +RD NRFH DGICSCGDYW
Sbjct: 597 IFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 170/354 (48%), Gaps = 3/354 (0%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G +HAH I + ++ + L+ Y K + ARKV DEMPE++ V+W +I+ +
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
+ +++ VF +M+ + + + T TVL + LG+G I L K+ + +V
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
+ L+ +Y+K G I AR +F + + D+++ A+I+GY G E ++++F L G
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+ T L+ S L + ++ + + +L +YS+ + AR+
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE-FTPNPVTITTTLSACA--Q 415
LFD PE+T +WNAM+ GY+++GL L LF+ M + P+ VT+ LS C+ +
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370
Query: 416 LGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNT 469
+ + + +P ++DM + G I EA + M K T
Sbjct: 371 MEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 170/362 (46%), Gaps = 21/362 (5%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGAT---RHARALFFSVRNPDIFLFNVLVKGFS 78
++HA +I Y L + T+ L +G AR + + ++ + ++ +S
Sbjct: 73 RVHAHMIKTRY---LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 79 VNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGMLLHAHAIVDGFGSNL 135
S ++ ++ + +R++ P+ +T+A + + + G +H + + S++
Sbjct: 130 QTGHSSEALTVFAEM-MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 136 FVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVAN 195
FV SSL+D+Y K ++ AR++F+ +PERD V+ +I G + ++++++F + +
Sbjct: 189 FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 196 GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA 255
G+ + T ++L A++ L L G C + A + L+ +YSKCG++S A
Sbjct: 249 GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 308
Query: 256 RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
R LF + + I++NAM+ GY+ +G ++LFR L+ +RV V L+ V S
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR-LMRDEKRVKPDA-VTLLAVLSGC 366
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIY-------SRLNEIDMARKLFDESPEKTV 368
H + + G + G ++ + T Y R ID A + P K
Sbjct: 367 SHGRMEDT--GLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424
Query: 369 AA 370
A
Sbjct: 425 AG 426
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 118/267 (44%), Gaps = 8/267 (2%)
Query: 6 SIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNP 65
+++T +A L QIH ++ Y S + + L G + AR +F +
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPD---DKYGMLL 122
D+ ++ G++ ++ ++ L ++P+ TYA + A +G
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLH-SEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
H H + + +SL+D+Y K + AR++FD MPER ++WN ++ G ++
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 183 DDSIQVFRDMV-ANGVQVDSTTVVTVLPAVA--ELQELGVGMGIQCLAFKFGFHRDAYVL 239
+ +++FR M V+ D+ T++ VL + +++ G+ + +A ++G
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 240 TGLVSLYSKCGDISTA-RLLFGMIGKP 265
+V + + G I A + M KP
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSKP 423
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/541 (37%), Positives = 313/541 (57%)
Query: 235 DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
D +L L++ YSKCG + AR +F + + L+++N MI YT N ++ +F E+
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
G + S T+ ++ + VK+ N V TAL +Y++ I
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 355 MARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
A ++F+ +K+ W++M++GY QN E AL L++ N T+++ + AC+
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 415 QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNT 474
L +L GK +H +I N++V+++ +DMYAKCG++ E+ +F + EKN WNT
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 475 IIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKY 534
II G+ H E + LF++M G+HP+ VTF S+L C H GLV EG F M Y
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 535 RIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVA 594
+ P H++CMVDILGRAG L +A E I+++P +P ++WG+LL +C+++KN ++A VA
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 454
Query: 595 SERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHV 654
+E+LFEL+P + G +VLLSNIY+ + + + A R++ + + K G + I+I H
Sbjct: 455 AEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHT 514
Query: 655 FVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIA 714
F G+ H I + L+ L K R+ GY+ LHDVE +KE ++ HSEKLA+
Sbjct: 515 FSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALV 574
Query: 715 FALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDY 774
F L+ + +RI+KNLR+C+DCH K S T R I+VRD NRFHHF DG CSCGD+
Sbjct: 575 FGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDF 634
Query: 775 W 775
W
Sbjct: 635 W 635
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 167/338 (49%), Gaps = 2/338 (0%)
Query: 141 LVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVD 200
L++ Y K V LAR+VFD M ER V+WNT+I RN +++ +F +M G +
Sbjct: 102 LINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFS 161
Query: 201 STTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFG 260
T+ +VL A + + CL+ K + YV T L+ LY+KCG I A +F
Sbjct: 162 EFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221
Query: 261 MIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHL 320
+ + +++M++GY N E ++ L+R + T+ +I S L
Sbjct: 222 SMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 321 TCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQ 380
+ KSG SN V+++ +Y++ + + +F E EK + WN +ISG+ +
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 381 NGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIY 439
+ + + LF++M PN VT ++ LS C G + G+ +L+++ L PN+
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 401
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVT-WNTII 476
+ ++D+ + G +SEA +L S+ T + W +++
Sbjct: 402 HYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 141/296 (47%), Gaps = 4/296 (1%)
Query: 24 HAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASP 83
H ++I + D+ + L G AR +F + + +N ++ ++ N
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 84 SSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGMLLHAHAIVDGFGSNLFVCSS 140
S ++ ++ +R +T + ++A + D LH ++ NL+V ++
Sbjct: 144 SEALDIFLEMR-NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTA 202
Query: 141 LVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVD 200
L+DLY K + A +VF+ M ++ +V W++++ G V+N Y++++ ++R ++ +
Sbjct: 203 LLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQN 262
Query: 201 STTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFG 260
T+ +V+ A + L L G + + K GF + +V + V +Y+KCG + + ++F
Sbjct: 263 QFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFS 322
Query: 261 MIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFG 316
+ + +L +N +ISG+ + + + LF ++ G + T L+ V G
Sbjct: 323 EVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 396 TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNIS 455
+ EF+ N + L CA+ G++ K H I +LE ++ + LI+ Y+KCG +
Sbjct: 55 SNEFS-NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVE 113
Query: 456 EARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACS 515
ARQ+FD M E++ V+WNT+I Y + EAL +F EM + G S T S+L AC
Sbjct: 114 LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG 173
Query: 516 HAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVW 575
E +++ H + K I+ ++D+ + G ++ A++ +M + W
Sbjct: 174 VNCDALECKKL-HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTW 231
Query: 576 GTLLGACKIHKNTDIARVASER 597
+++ +KN + A + R
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRR 253
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/645 (33%), Positives = 347/645 (53%), Gaps = 41/645 (6%)
Query: 172 VITGLVRNCYYDDSIQVF--RDMVANGVQV-------DSTTVVTVLPAVAELQELGVGMG 222
V+ L R + ++I V + ++ VQ+ ++T ++ ++ + L G
Sbjct: 47 VVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKK 106
Query: 223 IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
+ GF + L+ +Y+KCG + AR +F + DL ++N M++GY G
Sbjct: 107 VHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGL 166
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHL---------------------- 320
+E + KLF E+ ++ + G + P L L
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVA 226
Query: 321 -----TC-----SIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA 370
C I G+ V++G S+ + ++L +Y + ID AR +FD+ EK V +
Sbjct: 227 AAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVS 286
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIK 430
W +MI Y ++ SLF E++ + PN T L+ACA L + GK VH +
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT 346
Query: 431 SKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALK 490
+P + S++L+DMY KCGNI A+ + D + + V+W ++I G +G EALK
Sbjct: 347 RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALK 406
Query: 491 LFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDIL 550
F +L SG P VTF+++L AC+HAGLV +G E F+ + K+R+ ++H+ C+VD+L
Sbjct: 407 YFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLL 466
Query: 551 GRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYV 610
R+G+ E+ I MP++P +W ++LG C + N D+A A++ LF+++P + YV
Sbjct: 467 ARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYV 526
Query: 611 LLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYA 670
++NIY+ + + +R+ ++ + K PG + EI HVF++ D SH I
Sbjct: 527 TMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVE 586
Query: 671 MLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIK 730
L +L KM+E GY T LHDVE+E+KE + HSEKLA+AFA+++TE GT I++ K
Sbjct: 587 FLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFK 646
Query: 731 NLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
NLR C+DCH A KFIS IT+R I VRD+ RFH F++G CSCGDYW
Sbjct: 647 NLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 192/439 (43%), Gaps = 37/439 (8%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G +H H GF + + + L+ +Y K + ARKVFDEMP RD +WN ++ G
Sbjct: 104 GKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAE 163
Query: 179 NCYYDDSIQVFRD-----------MVANGVQVDSTTVVTVLPAVAE-------------- 213
+++ ++F + MV V+ D VL ++ +
Sbjct: 164 VGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 214 -------LQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPD 266
++ + G I + G D + + L+ +Y KCG I AR +F I + D
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
Query: 267 LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQG 326
++++ +MI Y + LF EL+ S +R + T G++ + L + G
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 327 YCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTET 386
Y + G S S++L +Y++ I+ A+ + D P+ + +W ++I G QNG +
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDE 403
Query: 387 ALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALI 445
AL F ++ + P+ VT LSAC G + G ++ + + + L T L+
Sbjct: 404 ALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLV 463
Query: 446 DMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSG 504
D+ A+ G + + + M K + W +++ G +G A + +E+ I P
Sbjct: 464 DLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPEN 521
Query: 505 -VTFLSILYACSHAGLVRE 522
VT++++ + AG E
Sbjct: 522 PVTYVTMANIYAAAGKWEE 540
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 189/406 (46%), Gaps = 11/406 (2%)
Query: 35 DLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLR 94
DL S + + G AR LF + D + + +V G+ P ++ LY+ ++
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
Query: 95 LRTNLAPDNYTYAFTIAASPDDK---YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRV 151
N P+ +T + +AA+ K G +H H + G S+ + SSL+D+Y K +
Sbjct: 210 RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCI 269
Query: 152 GLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAV 211
AR +FD++ E+D V+W ++I ++ + + +F ++V + + + T VL A
Sbjct: 270 DEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNAC 329
Query: 212 AELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYN 271
A+L +G + + GF ++ + LV +Y+KCG+I +A+ + KPDL+++
Sbjct: 330 ADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWT 389
Query: 272 AMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKS 331
++I G NG+ + ++K F LL SG + T V ++ + G + +
Sbjct: 390 SLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEK 449
Query: 332 GAISNSSVS-TALTTIYSRLNEIDMARKLFDESPEKTVA-AWNAMISGYTQNGLTETALS 389
+S++S T L + +R + + + E P K W +++ G + G + A
Sbjct: 450 HRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEE 509
Query: 390 LFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE 435
QE+ E NPVT T + A + GKW + K ++
Sbjct: 510 AAQELFKIE-PENPVTYVTMANIYA-----AAGKWEEEGKMRKRMQ 549
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 285/442 (64%), Gaps = 7/442 (1%)
Query: 341 TALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE-- 398
++ Y++ ID ARKLFDE PE+ V +W+ +I+GY G + AL LF+EM +
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 399 ---FTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNIS 455
PN T++T LSAC +LG+L GKWVH I ++E +I + TALIDMYAKCG++
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 456 EARQLFDSM-SEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS-GIHPSGVTFLSILYA 513
A+++F+++ S+K+ ++ +I ++G E +LF EM S I+P+ VTF+ IL A
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 514 CSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA 573
C H GL+ EG+ F M+ ++ I P +H+ CMVD+ GR+G +++A FI +MP+EP
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 574 VWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAK 633
+WG+LL ++ + A +RL ELDP + G YVLLSN+Y+ + + IR +
Sbjct: 372 IWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEME 431
Query: 634 KRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLH 693
+ + K PGC+ +E+ G H FV GD S + IYAML+++ ++RE GY T+T L
Sbjct: 432 VKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLL 491
Query: 694 DVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVI 753
D+ E++KE+ ++ HSEKLAIAF L+ T PGT +RIIKNLR+C DCH K ISK+ R I
Sbjct: 492 DLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREI 551
Query: 754 VVRDANRFHHFKDGICSCGDYW 775
VVRD NRFHHF+DG CSC D+W
Sbjct: 552 VVRDCNRFHHFRDGSCSCRDFW 573
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 177/410 (43%), Gaps = 46/410 (11%)
Query: 165 DTVAWNTVITGLVRNC---YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGM 221
++ WN +I +V N I V+ M + V D T +LP+ L +G
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 222 GIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNG 281
FG +D +V T L+++YS CGD+ +A+ +F G DL A+N++++ Y G
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 282 EIESSVKLFREL----------LVSGQ--------------------------RVSSSTM 305
I+ + KLF E+ L++G R + TM
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 306 VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE-SP 364
++ G L + Y K + + TAL +Y++ ++ A+++F+
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 365 EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE-FTPNPVTITTTLSACAQLGSLSFGK 423
+K V A++AMI GLT+ LF EM T++ PN VT L AC G ++ GK
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 424 -WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGL 481
+ +I+ + P+I ++D+Y + G I EA SM E + + W +++ G +
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 482 HGYGHEALKLFKEMLHSGIHPSGV-TFLSILYACSHAGLVREGEEIFHDM 530
G K ++ SG LS +YA G E + I H+M
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYA--KTGRWMEVKCIRHEM 430
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 194/444 (43%), Gaps = 79/444 (17%)
Query: 68 FLFNVLVKGFSVN-ASPSSSIALYTHLRLRTN-LAPDNYTYAFTIAASPDDKY---GMLL 122
FL+N++++ N +SP + +LR+R + ++PD +T+ F + + + + G
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFK----------------------------FSRVGL- 153
HA ++ G + FV +SL+++Y +++ GL
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 154 --ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG-----VQVDSTTVVT 206
ARK+FDEMPER+ ++W+ +I G V Y +++ +FR+M V+ + T+ T
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 207 VLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIG-KP 265
VL A L L G + K+ D + T L+ +Y+KCG + A+ +F +G K
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 266 DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ-RVSSSTMVGLIPVSSPFGHLHLTCSI 324
D+ AY+AMI G + +LF E+ S +S T VG++
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGIL--------------- 309
Query: 325 QGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLT 384
G CV G I+ + M + F +P ++ + M+ Y ++GL
Sbjct: 310 -GACVHRGLINEGK------------SYFKMMIEEFGITP--SIQHYGCMVDLYGRSGLI 354
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKW-VHQLIKSKNLEPNIYVSTA 443
+ A S M P+ + + LS LG + + + +LI+ + YV
Sbjct: 355 KEAESFIASM---PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYV--L 409
Query: 444 LIDMYAKCGNISEARQLFDSMSEK 467
L ++YAK G E + + M K
Sbjct: 410 LSNVYAKTGRWMEVKCIRHEMEVK 433
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 40/228 (17%)
Query: 371 WNAMISGYTQN---GLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ 427
WN +I N + +S++ M +P+ T L + L G+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 428 LIKSKNLEPNIYVSTALIDMYAKCGN-------------------------------ISE 456
I L+ + +V T+L++MY+ CG+ I +
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 457 ARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML-----HSGIHPSGVTFLSIL 511
AR+LFD M E+N ++W+ +I GY + G EAL LF+EM + + P+ T ++L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 512 YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
AC G + +G+ + H ++KY +E ++D+ + G LE+A
Sbjct: 207 SACGRLGALEQGKWV-HAYIDKYHVEIDIVLGTALIDMYAKCGSLERA 253
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 142/323 (43%), Gaps = 46/323 (14%)
Query: 16 NLPHLAQIHAQLILNGYQSDLASITKL------------TQKLFDFGATR---------- 53
+LP + HAQ++L G D T L Q++FD ++
Sbjct: 77 HLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVN 136
Query: 54 ---------HARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRL-RTNLA--- 100
AR LF + ++ ++ L+ G+ + ++ L+ ++L + N A
Sbjct: 137 AYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVR 196
Query: 101 PDNYTYAFTIAASPDDKYGMLLHA---HAIVDGFGS--NLFVCSSLVDLYFKFSRVGLAR 155
P+ +T + ++A + G L HA +D + ++ + ++L+D+Y K + A+
Sbjct: 197 PNEFTMSTVLSAC--GRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAK 254
Query: 156 KVFDEM-PERDTVAWNTVITGLVRNCYYDDSIQVFRDM-VANGVQVDSTTVVTVLPAVAE 213
+VF+ + ++D A++ +I L D+ Q+F +M ++ + +S T V +L A
Sbjct: 255 RVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVH 314
Query: 214 LQELGVGMG-IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTAR-LLFGMIGKPDLIAYN 271
+ G + + +FG +V LY + G I A + M +PD++ +
Sbjct: 315 RGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWG 374
Query: 272 AMISGYTCNGEIESSVKLFRELL 294
+++SG G+I++ + L+
Sbjct: 375 SLLSGSRMLGDIKTCEGALKRLI 397
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/633 (34%), Positives = 343/633 (54%), Gaps = 12/633 (1%)
Query: 148 FSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDD---SIQVFRDMVANGVQVDSTTV 204
S++ L R V + +++ R CY D +++ + ++G+ DS T
Sbjct: 5 MSKIKLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATY 64
Query: 205 VTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG-LVSLYSKCGDISTARLLFGMIG 263
++ + + G + C F HR L L+++Y K ++ A LF +
Sbjct: 65 SELIKCCISNRAVHEG-NLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP 123
Query: 264 KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLH-LTC 322
+ ++I++ MIS Y+ + +++L +L R + T ++ + + L C
Sbjct: 124 QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHC 183
Query: 323 SIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNG 382
I +K G S+ V +AL ++++L E + A +FDE WN++I G+ QN
Sbjct: 184 GI----IKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 383 LTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVST 442
++ AL LF+ M F T+T+ L AC L L G H + + ++ ++
Sbjct: 240 RSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH--VHIVKYDQDLILNN 297
Query: 443 ALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHP 502
AL+DMY KCG++ +A ++F+ M E++ +TW+T+I G +GY EALKLF+ M SG P
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKP 357
Query: 503 SGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEF 562
+ +T + +L+ACSHAGL+ +G F M Y I+P+ EH+ CM+D+LG+AG+L+ A++
Sbjct: 358 NYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKL 417
Query: 563 IRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNF 622
+ M EP W TLLGAC++ +N +A A++++ LDP G Y LLSNIY+ + +
Sbjct: 418 LNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKW 477
Query: 623 PKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREI 682
IR + R + K PGC+ IE+N H F+ GD SH + L +L ++ I
Sbjct: 478 DSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGI 537
Query: 683 GYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTAT 742
GY ET L D+E E+ E + HSEKLA+AF L+T IRI KNLR+C DCH
Sbjct: 538 GYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFC 597
Query: 743 KFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
K SK+ R IV+RD R+HHF+DG CSCGDYW
Sbjct: 598 KLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 196/383 (51%), Gaps = 10/383 (2%)
Query: 99 LAPDNYTYAFTIAASPDDKY---GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLAR 155
L D+ TY+ I ++ G L+ H +G +F+ + L+++Y KF+ + A
Sbjct: 57 LWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAH 116
Query: 156 KVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQ 215
++FD+MP+R+ ++W T+I+ + + ++++ M+ + V+ + T +VL + +
Sbjct: 117 QLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS 176
Query: 216 ELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMIS 275
++ + + C K G D +V + L+ +++K G+ A +F + D I +N++I
Sbjct: 177 DVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIG 233
Query: 276 GYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAIS 335
G+ N + +++LF+ + +G +T+ ++ + L L + VK
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--Q 291
Query: 336 NSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMM 395
+ ++ AL +Y + ++ A ++F++ E+ V W+ MISG QNG ++ AL LF+ M
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351
Query: 396 TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKS-KNLEPNIYVSTALIDMYAKCGNI 454
++ PN +TI L AC+ G L G + + +K ++P +ID+ K G +
Sbjct: 352 SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKL 411
Query: 455 SEARQLFDSMS-EKNTVTWNTII 476
+A +L + M E + VTW T++
Sbjct: 412 DDAVKLLNEMECEPDAVTWRTLL 434
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 193/447 (43%), Gaps = 44/447 (9%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
I L NG++ + + L F A LF + ++ + ++ +S
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 142
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLV 142
++ L L LR N+ P+ YTY+ + + +LH I +G S++FV S+L+
Sbjct: 143 HQKALELLV-LMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALI 201
Query: 143 DLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDST 202
D++ K A VFDEM D + WN++I G +N D ++++F+ M G +
Sbjct: 202 DVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 203 TVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMI 262
T+ +VL A L L +GM K+ +D + LV +Y KCG + A +F +
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 263 GKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC 322
+ D+I ++ MISG NG + ++KLF + SG + + T+VG++ S G L
Sbjct: 320 KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE--- 376
Query: 323 SIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNG 382
G+ Y R +KL+ P + + MI + G
Sbjct: 377 --DGW------------------YYFR-----SMKKLYGIDPVRE--HYGCMIDLLGKAG 409
Query: 383 LTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVST 442
+ A+ L EM E P+ VT T L AC ++ ++ + K L+P +
Sbjct: 410 KLDDAVKLLNEM---ECEPDAVTWRTLLGACRVQRNMVLAEYAAK--KVIALDPEDAGTY 464
Query: 443 ALIDMYAKCGNISEARQLFDSMSEKNT 469
L+ NI Q +DS+ E T
Sbjct: 465 TLL------SNIYANSQKWDSVEEIRT 485
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/682 (33%), Positives = 365/682 (53%), Gaps = 8/682 (1%)
Query: 6 SIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNP 65
S+++ I NL +HA+ I G S++ + L A +F ++
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAF---TIAASPDDKYGMLL 122
+ +N +++G++ N + L+ ++ + D++T+ T AAS D + G
Sbjct: 392 NDVFWNAMIRGYAHNGESHKVMELFMDMK-SSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
H+ I NLFV ++LVD+Y K + AR++F+ M +RD V WNT+I V++
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
++ +F+ M G+ D + + L A + L G + CL+ K G RD + + L
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
+ +YSKCG I AR +F + + +++ NA+I+GY+ N +E +V LF+E+L G S
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSE 629
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSS-VSTALTTIYSRLNEIDMARKLFD 361
T ++ L L G K G S + +L +Y + A LF
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689
Query: 362 E-SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLS 420
E S K++ W M+SG++QNG E AL ++EM P+ T T L C+ L SL
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 421 FGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGY 479
G+ +H LI + + S LIDMYAKCG++ + Q+FD M + N V+WN++I GY
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809
Query: 480 GLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPL 539
+GY +ALK+F M S I P +TFL +L ACSHAG V +G +IF M+ +Y IE
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEAR 869
Query: 540 AEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLF 599
+H ACMVD+LGR G L++A +FI ++P +W +LLGAC+IH + +++E+L
Sbjct: 870 VDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLI 929
Query: 600 ELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGD 659
EL+P + YVLLSNIY+ + KA ++R+V + R + K PG + I++ TH+F +GD
Sbjct: 930 ELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGD 989
Query: 660 RSHSHATAIYAMLEKLTGKMRE 681
+SHS I LE L M++
Sbjct: 990 KSHSEIGKIEMFLEDLYDLMKD 1011
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/559 (27%), Positives = 274/559 (49%), Gaps = 18/559 (3%)
Query: 31 GYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALY 90
G++ D + + G + AR LF + +PD+ +NV++ G + +I +
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 91 THLR------LRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDL 144
++R R+ L + A I A+ D G+++HA AI G SN++V SSLV +
Sbjct: 316 FNMRKSSVKSTRSTLG--SVLSAIGIVANLD--LGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 145 YFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTV 204
Y K ++ A KVF+ + E++ V WN +I G N +++F DM ++G +D T
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 205 VTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK 264
++L A +L +G + K ++ +V LV +Y+KCG + AR +F +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 265 PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSI 324
D + +N +I Y + + LF+ + + G + + + + L+ +
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 325 QGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLT 384
VK G + ++L +YS+ I ARK+F PE +V + NA+I+GY+QN L
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL- 610
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH-QLIKSKNLEPNIYVSTA 443
E A+ LFQEM+T P+ +T T + AC + SL+ G H Q+ K Y+ +
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 444 LIDMYAKCGNISEARQLFDSMSE-KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHP 502
L+ MY ++EA LF +S K+ V W ++ G+ +G+ EALK +KEM H G+ P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 503 SGVTFLSILYACSHAGLVREGEEIFHDMVN--KYRIEPLAEHHACMVDILGRAGQLEKAL 560
TF+++L CS +REG I H ++ + ++ L + ++D+ + G ++ +
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAI-HSLIFHLAHDLDELTSN--TLIDMYAKCGDMKGSS 787
Query: 561 EFIRTMPVEPGPAVWGTLL 579
+ M W +L+
Sbjct: 788 QVFDEMRRRSNVVSWNSLI 806
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 245/511 (47%), Gaps = 40/511 (7%)
Query: 60 FSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAF---TIAASPDD 116
F D+ +N ++ +S P + + L + P+ +T++ T A +
Sbjct: 118 FDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSL-FENQIFPNKFTFSIVLSTCARETNV 176
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
++G +H I G N + +LVD+Y K R+ AR+VF+ + + +TV W + +G
Sbjct: 177 EFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGY 236
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
V+ ++++ VF M G + D VTV
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTV----------------------------- 267
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
++ Y + G + ARLLFG + PD++A+N MISG+ G +++ F + S
Sbjct: 268 ------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS 321
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
+ + ST+ ++ +L L + +K G SN V ++L ++YS+ +++ A
Sbjct: 322 SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
K+F+ EK WNAMI GY NG + + LF +M ++ + + T T+ LS CA
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTII 476
L G H +I K L N++V AL+DMYAKCG + +ARQ+F+ M +++ VTWNTII
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTII 501
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
Y EA LFK M GI G S L AC+H + +G+++ H + K +
Sbjct: 502 GSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGL 560
Query: 537 EPLAEHHACMVDILGRAGQLEKALEFIRTMP 567
+ + ++D+ + G ++ A + ++P
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 211/465 (45%), Gaps = 38/465 (8%)
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
+ G +H+ +++ G S + +++VDLY K ++V A K FD + E+D AWN++++
Sbjct: 77 RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMY 135
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
++ F + N + + T VL A + G I C K G R++
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
Y LV +Y+KC IS AR +F I P+ + + + SGY G E +V +F +
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
G R V +I Y RL ++ A
Sbjct: 256 GHRPDHLAFVTVI-----------------------------------NTYIRLGKLKDA 280
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
R LF E V AWN MISG+ + G A+ F M + T+ + LSA +
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTII 476
+L G VH L NIYV ++L+ MY+KC + A ++F+++ EKN V WN +I
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
GY +G H+ ++LF +M SG + TF S+L C+ + + G + FH ++ K ++
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKL 459
Query: 537 EPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
+VD+ + G LE A + M + W T++G+
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 146/308 (47%), Gaps = 10/308 (3%)
Query: 332 GAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLF 391
G S + A+ +Y++ ++ A K FD EK V AWN+M+S Y+ G L F
Sbjct: 90 GIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSF 148
Query: 392 QEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKC 451
+ + PN T + LS CA+ ++ FG+ +H + LE N Y AL+DMYAKC
Sbjct: 149 VSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKC 208
Query: 452 GNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSIL 511
IS+AR++F+ + + NTV W + GY G EA+ +F+ M G P + F++++
Sbjct: 209 DRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI 268
Query: 512 YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEF---IRTMPV 568
G +++ +F +M + P M+ G+ G A+E+ +R V
Sbjct: 269 NTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSV 323
Query: 569 EPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYY-VLLSNIYSVGRNFPKAAS 627
+ + G++L A I N D+ V +L S Y L ++YS AA
Sbjct: 324 KSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAK 383
Query: 628 IREVAKKR 635
+ E +++
Sbjct: 384 VFEALEEK 391
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 163/417 (39%), Gaps = 100/417 (23%)
Query: 102 DNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEM 161
D++++ ++ SPD G ++ H + S+ + L+++ ++ +RKVFDEM
Sbjct: 15 DSFSFVRRLSYSPD--LGRRIYGHVL----PSHDQIHQRLLEICLGQCKLFKSRKVFDEM 68
Query: 162 PERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGM 221
P+R +A L +G
Sbjct: 69 PQRLALA------------------------------------------------LRIGK 80
Query: 222 GIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNG 281
+ + G + + +V LY+KC +S A F + K D+ A+N+M+S Y+ G
Sbjct: 81 AVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSSIG 139
Query: 282 E----IESSVKLFRELLVSGQRVSSSTMVGLI-PVSSPFGHLHLTCSIQGYCVKSGAISN 336
+ + S V LF + + S + + FG + CS+ +K G N
Sbjct: 140 KPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR-QIHCSM----IKMGLERN 194
Query: 337 SSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMT 396
S AL +Y++ + I AR++F+ + W + SGY + GL E A+ +F+ M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 397 TEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISE 456
P+ + T +I+ Y + G + +
Sbjct: 255 EGHRPDHLAFVT-----------------------------------VINTYIRLGKLKD 279
Query: 457 ARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYA 513
AR LF MS + V WN +I G+G G A++ F M S + + T S+L A
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIF 477
+L GK VH ++ + A++D+YAKC +S A + FD + EK+ WN+++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
Y G + L+ F + + I P+ TF +L C+ V G +I M+ K +E
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI-KMGLE 192
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
+ +VD+ + ++ A + V+P W L
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLF 233
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 243/711 (34%), Positives = 366/711 (51%), Gaps = 55/711 (7%)
Query: 74 VKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGF-- 131
+K SV P SS A + +PD + I A D +HA + G
Sbjct: 1 MKSLSVIFKPKSSPA-KIYFPADRQASPDESHFISLIHACKDTASLRHVHAQILRRGVLS 59
Query: 132 ---GSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQV 188
+ L CSSL+ K L+ +F ER+ N +I GL N ++ S++
Sbjct: 60 SRVAAQLVSCSSLL----KSPDYSLS--IFRNSEERNPFVLNALIRGLTENARFESSVRH 113
Query: 189 FRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSK 248
F M+ GV+ D T VL + ++L +G + K D++V LV +Y+K
Sbjct: 114 FILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAK 173
Query: 249 CGDISTARLLF----GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSST 304
G + A +F I K ++ +N +I+GY ++ + LFR + +R S S
Sbjct: 174 TGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSM---PERNSGS- 229
Query: 305 MVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
+ I+GY V SG E++ A++LF+ P
Sbjct: 230 ---------------WSTLIKGY-VDSG-------------------ELNRAKQLFELMP 254
Query: 365 EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKW 424
EK V +W +I+G++Q G ETA+S + EM+ PN TI LSAC++ G+L G
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 425 VHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGY 484
+H I ++ + + TAL+DMYAKCG + A +F +M+ K+ ++W +I G+ +HG
Sbjct: 315 IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGR 374
Query: 485 GHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHA 544
H+A++ F++M++SG P V FL++L AC ++ V G F M Y IEP +H+
Sbjct: 375 FHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYV 434
Query: 545 CMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPG 604
+VD+LGRAG+L +A E + MP+ P W L ACK HK A S+ L ELDP
Sbjct: 435 LVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPE 494
Query: 605 SVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSH 664
G Y+ L ++ N R +KR ++ G + IE++G + F +GD SH
Sbjct: 495 LCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKL 554
Query: 665 ATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGT 724
I L+++ + GY S+HD+EEEEKE + +HSEKLA+ + T PGT
Sbjct: 555 TQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGT 614
Query: 725 EIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
IRIIKNLR+C DCH+ K++SKI++R I++RDA +FHHFKDG CSCGDYW
Sbjct: 615 TIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 159/366 (43%), Gaps = 81/366 (22%)
Query: 8 ITFINKACNLPHLAQIHAQLILNGYQS-----DLASITKLTQKLFDFGATRHARALFFSV 62
I+ I+ + L +HAQ++ G S L S + L + + ++ ++F +
Sbjct: 33 ISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLK------SPDYSLSIFRNS 86
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---G 119
+ F+ N L++G + NA SS+ + L LR + PD T+ F + ++ + G
Sbjct: 87 EERNPFVLNALIRGLTENARFESSVRHFI-LMLRLGVKPDRLTFPFVLKSNSKLGFRWLG 145
Query: 120 MLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDE------------------- 160
LHA + + + FV SLVD+Y K ++ A +VF+E
Sbjct: 146 RALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLING 205
Query: 161 ----------------MPERDTVAWNTVITGLVRNCYYDDSIQVFR-------------- 190
MPER++ +W+T+I G V + + + Q+F
Sbjct: 206 YCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLI 265
Query: 191 -----------------DMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH 233
+M+ G++ + T+ VL A ++ LG G+ I G
Sbjct: 266 NGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIK 325
Query: 234 RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL 293
D + T LV +Y+KCG++ A +F + D++++ AMI G+ +G +++ FR++
Sbjct: 326 LDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
Query: 294 LVSGQR 299
+ SG++
Sbjct: 386 MYSGEK 391
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 14/282 (4%)
Query: 2 IQRNSIITF---INKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARAL 58
I++ SI+ + IN C + + L + + + S + L + D G A+ L
Sbjct: 191 IKKESILIWNVLINGYCRAKDM-HMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQL 249
Query: 59 FFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK- 117
F + ++ + L+ GFS ++I+ Y + L L P+ YT A ++A
Sbjct: 250 FELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM-LEKGLKPNEYTIAAVLSACSKSGA 308
Query: 118 --YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITG 175
G+ +H + + +G + + ++LVD+Y K + A VF M +D ++W +I G
Sbjct: 309 LGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQG 368
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI---QCLAFKFGF 232
+ + +IQ FR M+ +G + D + VL A E+ +G+ L +
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 233 HRDAYVLTGLVSLYSKCGDISTA-RLLFGMIGKPDLIAYNAM 273
YVL +V L + G ++ A L+ M PDL + A+
Sbjct: 429 TLKHYVL--VVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/613 (34%), Positives = 335/613 (54%), Gaps = 7/613 (1%)
Query: 70 FNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHA 126
+N+ ++ P S+ L+ ++ R P+N+T+ F A D ++HAH
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMK-RGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSI 186
I F S++FV ++ VD++ K + V A KVF+ MPERD WN +++G ++ + D +
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 187 QVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLY 246
+FR+M N + DS TV+T++ + + + L + + + + G V +S Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 247 SKCGDISTARLLFGMIGKPD--LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSST 304
KCGD+ +A+L+F I + D ++++N+M Y+ GE + L+ +L + ST
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST 258
Query: 305 MVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
+ L L I + + G + ++YS+ + AR LFD
Sbjct: 259 FINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMT 318
Query: 365 EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKW 424
+T +W MISGY + G + AL+LF M+ + P+ VT+ + +S C + GSL GKW
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Query: 425 VHQLIKSKNLE-PNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHG 483
+ + N+ + ALIDMY+KCG+I EAR +FD+ EK VTW T+I GY L+G
Sbjct: 379 IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 438
Query: 484 YGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHH 543
EALKLF +M+ P+ +TFL++L AC+H+G + +G E FH M Y I P +H+
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY 498
Query: 544 ACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDP 603
+CMVD+LGR G+LE+ALE IR M +P +WG LL ACKIH+N IA A+E LF L+P
Sbjct: 499 SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEP 558
Query: 604 GSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHS 663
YV ++NIY+ + A IR + K+R + K PG ++I++NG H F G+ H
Sbjct: 559 QMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHV 618
Query: 664 HATAIYAMLEKLT 676
IY L L+
Sbjct: 619 ENEVIYFTLNGLS 631
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 228/490 (46%), Gaps = 13/490 (2%)
Query: 5 NSIITFINKAC----NLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFF 60
N F+ KAC ++ +HA LI + + SD+ T + +A +F
Sbjct: 52 NFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFE 111
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGM 120
+ D +N ++ GF + + +L+ +RL + PD+ T I ++ +K
Sbjct: 112 RMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRL-NEITPDSVTVMTLIQSASFEKSLK 170
Query: 121 LL---HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP--ERDTVAWNTVITG 175
LL HA I G + V ++ + Y K + A+ VF+ + +R V+WN++
Sbjct: 171 LLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
D+ ++ M+ + D +T + + + + L G I A G +D
Sbjct: 231 YSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQD 290
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
+ +S+YSK D +ARLLF ++ +++ MISGY G+++ ++ LF ++
Sbjct: 291 IEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIK 350
Query: 296 SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAI-SNSSVSTALTTIYSRLNEID 354
SG++ T++ LI FG L I G N + AL +YS+ I
Sbjct: 351 SGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIH 410
Query: 355 MARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
AR +FD +PEKTV W MI+GY NG+ AL LF +M+ ++ PN +T L ACA
Sbjct: 411 EARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACA 470
Query: 415 QLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTW 472
GSL G ++ H + + N+ P + + ++D+ + G + EA +L +MS K + W
Sbjct: 471 HSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIW 530
Query: 473 NTIIFGYGLH 482
++ +H
Sbjct: 531 GALLNACKIH 540
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 193/426 (45%), Gaps = 23/426 (5%)
Query: 168 AWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLA 227
AWN I V +S+ +FR+M G + ++ T V A A L ++G +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 228 FKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSV 287
K F D +V T V ++ KC + A +F + + D +NAM+SG+ +G + +
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY 347
LFRE+ ++ S T++ LI +S L L ++ ++ G +V+ + Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 348 SRLNEIDMARKLFD--ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
+ ++D A+ +F+ + ++TV +WN+M Y+ G A L+ M+ EF P+ T
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST 258
Query: 406 ITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
++C +L+ G+ +H + +I I MY+K + AR LFD M+
Sbjct: 259 FINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMT 318
Query: 466 EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEE 525
+ V+W +I GY G EAL LF M+ SG P VT LS++ C G + G+
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK- 377
Query: 526 IFHDMVNKYRIEPLAEHHAC----------MVDILGRAGQLEKALEFIRTMPVEPGPAVW 575
I+ A+ + C ++D+ + G + +A + P E W
Sbjct: 378 ---------WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTW 427
Query: 576 GTLLGA 581
T++
Sbjct: 428 TTMIAG 433
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
R+L+ S +V AWN I +L LF+EM F PN T ACA+L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 417 GSLSFGKWVH-QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTI 475
+ + VH LIKS +++V TA +DM+ KC ++ A ++F+ M E++ TWN +
Sbjct: 66 ADVGCCEMVHAHLIKSP-FWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAM 124
Query: 476 IFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACS 515
+ G+ G+ +A LF+EM + I P VT ++++ + S
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/519 (38%), Positives = 308/519 (59%), Gaps = 1/519 (0%)
Query: 258 LFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGH 317
+F I P +N MI GY E ++ + E++ G + T L+ +
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS 147
Query: 318 LHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISG 377
+ I G K G ++ V +L +Y R E++++ +F++ KT A+W++M+S
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 378 YTQNGLTETALSLFQEMMT-TEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
G+ L LF+ M + T + + L ACA G+L+ G +H + E
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML 496
NI V T+L+DMY KCG + +A +F M ++N +T++ +I G LHG G AL++F +M+
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 497 HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQL 556
G+ P V ++S+L ACSH+GLV+EG +F +M+ + ++EP AEH+ C+VD+LGRAG L
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
Query: 557 EKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIY 616
E+ALE I+++P+E +W T L C++ +N ++ ++A++ L +L + G Y+L+SN+Y
Sbjct: 388 EEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLY 447
Query: 617 SVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLT 676
S G+ + A R + L +TPG +++E+ G TH FVS DRSH IY ML ++
Sbjct: 448 SQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQME 507
Query: 677 GKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCL 736
+++ GY + L +V+EEEK+ + HS+K+AIAF L+ T PG+ I+I +NLR+C
Sbjct: 508 WQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCS 567
Query: 737 DCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
DCHT TK IS I ER IVVRD NRFH FK G CSC DYW
Sbjct: 568 DCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 161/326 (49%), Gaps = 3/326 (0%)
Query: 154 ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAE 213
A +F + + T +NT+I G V +++++ + +M+ G + D+ T +L A
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 214 LQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAM 273
L+ + G I FK G D +V L+++Y +CG++ + +F + ++++M
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 274 ISGYTCNGEIESSVKLFRELLV-SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG 332
+S G + LFR + + + S MV + + G L+L SI G+ +++
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 333 AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQ 392
+ N V T+L +Y + +D A +F + ++ ++AMISG +G E+AL +F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 393 EMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH-QLIKSKNLEPNIYVSTALIDMYAKC 451
+M+ P+ V + L+AC+ G + G+ V +++K +EP L+D+ +
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 452 GNISEARQLFDSMS-EKNTVTWNTII 476
G + EA + S+ EKN V W T +
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFL 410
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 171/397 (43%), Gaps = 49/397 (12%)
Query: 54 HARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS 113
+A ++F + +P F FN +++G+ S ++ Y + R N PDN+TY + A
Sbjct: 84 YAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN-EPDNFTYPCLLKAC 142
Query: 114 PDDK---YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWN 170
K G +H G +++FV +SL+++Y + + L+ VF+++ + +W+
Sbjct: 143 TRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWS 202
Query: 171 TVITGLVRNCYYDDSIQVFRDMVAN-GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFK 229
++++ + + + +FR M + ++ + + +V+ L A A L +GM I +
Sbjct: 203 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 262
Query: 230 FGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKL 289
+ V T LV +Y KCG + A +F + K + + Y+AMISG +GE ES++++
Sbjct: 263 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 322
Query: 290 FRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSR 349
F +++ G V S+ C SG +
Sbjct: 323 FSKMIKEGLEPDHVVYV----------------SVLNACSHSGLVKE------------- 353
Query: 350 LNEIDMARKLFDE-----SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
R++F E E T + ++ + GL E AL Q + N V
Sbjct: 354 ------GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ---SIPIEKNDV 404
Query: 405 TITTTLSACAQLGSLSFGKWVHQ-LIKSKNLEPNIYV 440
T LS C ++ G+ Q L+K + P Y+
Sbjct: 405 IWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYL 441
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 3/194 (1%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
QIH Q+ G ++D+ L G + A+F + + ++ +V +
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLLHAHAIVDGFGSNLFVC 138
S + L+ + TNL + + A + GM +H + + N+ V
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQ 272
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+SLVD+Y K + A +F +M +R+ + ++ +I+GL + + ++++F M+ G++
Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 332
Query: 199 VDSTTVVTVLPAVA 212
D V+VL A +
Sbjct: 333 PDHVVYVSVLNACS 346
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/549 (36%), Positives = 325/549 (59%), Gaps = 4/549 (0%)
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
GF + Y++ ++ ++ KCG I AR LF I + +L +Y ++ISG+ G + +LF
Sbjct: 153 GFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELF 212
Query: 291 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRL 350
+ + + T ++ S+ G +++ + +K G + N+ VS L +YS+
Sbjct: 213 KMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKC 272
Query: 351 NEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
+I+ AR F+ PEKT AWN +I+GY +G +E AL L +M + + + T++ +
Sbjct: 273 GDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMI 332
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
+L L K H + E I +TAL+D Y+K G + AR +FD + KN +
Sbjct: 333 RISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNII 392
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
+WN ++ GY HG G +A+KLF++M+ + + P+ VTFL++L AC+++GL +G EIF M
Sbjct: 393 SWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM 452
Query: 531 VNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDI 590
+ I+P A H+ACM+++LGR G L++A+ FIR P++ +W LL AC++ +N ++
Sbjct: 453 SEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLEL 512
Query: 591 ARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEING 650
RV +E+L+ + P +G YV++ N+Y+ +AA + E + + L+ P CT +E+
Sbjct: 513 GRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGD 572
Query: 651 TTHVFVSGDRSHSH----ATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNV 706
TH F+SGDR S+ IY +++L ++ E GY E L DV+E+E+E +
Sbjct: 573 QTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRY 632
Query: 707 HSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKD 766
HSEKLAIA+ L+ T ++I +N R+C +CH +FIS +T R +VVRDA+RFHHFK+
Sbjct: 633 HSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKE 692
Query: 767 GICSCGDYW 775
G CSCG YW
Sbjct: 693 GKCSCGGYW 701
Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 182/358 (50%), Gaps = 4/358 (1%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
++ + +GF ++ + ++ ++ K + AR++FDE+PER+ ++ ++I+G V
Sbjct: 145 VYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGN 204
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
Y ++ ++F+ M ++ T +L A A L + VG + A K G + +V G
Sbjct: 205 YVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCG 264
Query: 242 LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
L+ +YSKCGDI AR F + + +A+N +I+GY +G E ++ L ++ SG +
Sbjct: 265 LIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSID 324
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
T+ +I +S+ L LT +++G S +TAL YS+ +D AR +FD
Sbjct: 325 QFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFD 384
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
+ P K + +WNA++ GY +G A+ LF++M+ PN VT LSACA G LS
Sbjct: 385 KLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSG-LSE 443
Query: 422 GKWVHQLIKSK--NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVT-WNTII 476
W L S+ ++P +I++ + G + EA K TV W ++
Sbjct: 444 QGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALL 501
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 151/330 (45%), Gaps = 30/330 (9%)
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+V ST L+ + + G+ + +G + + ++ + I AR+
Sbjct: 120 KVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARR 179
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV-TITTTLSACAQLG 417
LFDE PE+ + ++ ++ISG+ G A LF+ MM E + T L A A LG
Sbjct: 180 LFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK-MMWEELSDCETHTFAVMLRASAGLG 238
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIF 477
S+ GK +H + N +VS LIDMY+KCG+I +AR F+ M EK TV WN +I
Sbjct: 239 SIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIA 298
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACS------------HAGLVREGEE 525
GY LHGY EAL L +M SG+ T LSI+ S HA L+R G
Sbjct: 299 GYALHGYSEEALCLLYDMRDSGVSIDQFT-LSIMIRISTKLAKLELTKQAHASLIRNG-- 355
Query: 526 IFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH 585
+ E +A + +VD + G+++ A +P W L+G H
Sbjct: 356 --------FESEIVA--NTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANH 404
Query: 586 -KNTDIARVASERL-FELDPGSVGYYVLLS 613
+ TD ++ + + + P V + +LS
Sbjct: 405 GRGTDAVKLFEKMIAANVAPNHVTFLAVLS 434
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 20 LAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSV 79
+ +++ ++ NG++ + + ++ G AR LF + +++ + ++ GF
Sbjct: 142 VKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVN 201
Query: 80 NASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHAIVDGFGSNLF 136
+ + L+ + + + +T+A + AS G LH A+ G N F
Sbjct: 202 FGNYVEAFELFKMMWEELSDC-ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTF 260
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG 196
V L+D+Y K + AR F+ MPE+ TVAWN VI G + Y ++++ + DM +G
Sbjct: 261 VSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSG 320
Query: 197 VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTAR 256
V +D T+ ++ +L +L + + GF + T LV YSK G + TAR
Sbjct: 321 VSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTAR 380
Query: 257 LLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
+F + + ++I++NA++ GY +G +VKLF +++ +
Sbjct: 381 YVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAA 420
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT 109
G AR F + +N ++ G++++ ++ L +R + ++ D +T +
Sbjct: 273 GDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMR-DSGVSIDQFTLSIM 331
Query: 110 IAASPD-DKYGMLLHAHA--IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT 166
I S K + AHA I +GF S + ++LVD Y K+ RV AR VFD++P ++
Sbjct: 332 IRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNI 391
Query: 167 VAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVA 212
++WN ++ G + D++++F M+A V + T + VL A A
Sbjct: 392 ISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
Query: 387 ALSLFQEM-MTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI 445
A LF+ + + F T + AC +L S+ K V+ + S EP Y+ ++
Sbjct: 106 AFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRIL 165
Query: 446 DMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGV 505
M+ KCG I +AR+LFD + E+N ++ +II G+ G EA +LFK M
Sbjct: 166 LMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETH 225
Query: 506 TFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRT 565
TF +L A + G + G+++ H K + ++D+ + G +E A
Sbjct: 226 TFAVMLRASAGLGSIYVGKQL-HVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFEC 284
Query: 566 MPVEPGPAVWGTLLGACKIHKNTDIA 591
MP E W ++ +H ++ A
Sbjct: 285 MP-EKTTVAWNNVIAGYALHGYSEEA 309
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/663 (33%), Positives = 354/663 (53%), Gaps = 82/663 (12%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGL-----ARKVFDEMPERDTVAWNTVITGL 176
+H H + G + ++ + L+ +++G+ AR+V + + R+ W VI G
Sbjct: 68 IHGHVLRKGLDQSCYILTKLIR---TLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+D++I ++ M + S T +L A +++ + +G Q FH
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKD--LNLGRQ-------FHAQT 175
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
+ L G +Y +G N MI Y I+ + K+F E+
Sbjct: 176 FRLRGFCFVY---------------VG-------NTMIDMYVKCESIDCARKVFDEM--- 210
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
+ IS T L Y+R+ ++ A
Sbjct: 211 --------------------------------PERDVIS----WTELIAAYARVGNMECA 234
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
+LF+ P K + AW AM++G+ QN + AL F M + + VT+ +SACAQL
Sbjct: 235 AELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQL 294
Query: 417 GSLSFGKWVHQLIKSKNLEPN--IYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNT 474
G+ + Q+ + P+ + + +ALIDMY+KCGN+ EA +F SM+ KN T+++
Sbjct: 295 GASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSS 354
Query: 475 IIFGYGLHGYGHEALKLFKEML-HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
+I G HG EAL LF M+ + I P+ VTF+ L ACSH+GLV +G ++F M
Sbjct: 355 MILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQT 414
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARV 593
+ ++P +H+ CMVD+LGR G+L++ALE I+TM VEP VWG LLGAC+IH N +IA +
Sbjct: 415 FGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEI 474
Query: 594 ASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCT-LIEINGTT 652
A+E LFEL+P +G Y+LLSN+Y+ ++ +R++ K++ L KTP + +++ NG
Sbjct: 475 AAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQM 534
Query: 653 HVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLA 712
H F G+ +H + I LE+L ++ +GYQ + + +DV + K L++ H+EKLA
Sbjct: 535 HKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLA 594
Query: 713 IAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCG 772
+AF+L+TT + I I+KNLR+CLDCH + S++T +VI++RD RFHHF+ G CSCG
Sbjct: 595 LAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCG 654
Query: 773 DYW 775
D+W
Sbjct: 655 DFW 657
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 165/352 (46%), Gaps = 42/352 (11%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATR--HARALFFSV 62
+S+I+ ++ NL + QIH ++ G +TKL + L G +AR + V
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYG 119
+ + FL+ +++G+++ +IA+Y +R + + P ++T++ + A D G
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMR-KEEITPVSFTFSALLKACGTMKDLNLG 168
Query: 120 MLLHAHAI-VDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT------------ 166
HA + GF ++V ++++D+Y K + ARKVFDEMPERD
Sbjct: 169 RQFHAQTFRLRGF-CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 167 -------------------VAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTV 207
VAW ++TG +N ++++ F M +G++ D TV
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 208 LPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG--LVSLYSKCGDISTARLLFGMIGKP 265
+ A A+L +A K G+ +V+ G L+ +YSKCG++ A +F +
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 266 DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ-RVSSSTMVGLIPVSSPFG 316
++ Y++MI G +G + ++ LF ++ + + ++ T VG + S G
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSG 399
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISE--ARQLFD 462
++ + L C L + K +H + K L+ + Y+ T LI K G + AR++ +
Sbjct: 51 SLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 463 SMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVRE 522
+ +N W +I GY + G EA+ ++ M I P TF ++L AC +
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 523 GEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
G + FH + R M+D+ + ++ A + MP E W L+ A
Sbjct: 168 GRQ-FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAA 224
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 12/232 (5%)
Query: 33 QSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTH 92
+ D+ S T+L G A LF S+ D+ + +V GF+ NA P ++ +
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 93 LRLRTNLAPDNYTYAFTIAASPD---DKYGMLLHAHAIVDGF--GSNLFVCSSLVDLYFK 147
+ ++ + D T A I+A KY A G+ ++ + S+L+D+Y K
Sbjct: 272 ME-KSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSK 330
Query: 148 FSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG-VQVDSTTVVT 206
V A VF M ++ ++++I GL + +++ +F MV ++ ++ T V
Sbjct: 331 CGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVG 390
Query: 207 VLPAVAELQELGVGMGI-QCLAFKFGFH--RDAYVLTGLVSLYSKCGDISTA 255
L A + + G + + FG RD Y T +V L + G + A
Sbjct: 391 ALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY--TCMVDLLGRTGRLQEA 440
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/674 (33%), Positives = 368/674 (54%), Gaps = 7/674 (1%)
Query: 12 NKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALF--FSVRNPDIFL 69
N +L + +H +++ G + D+ L F AR +F F +R+ D+++
Sbjct: 15 NSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRS-DVYI 73
Query: 70 FNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHA 126
+N L+ G+S N+ ++ ++ L + PD++T+ I A + G ++H
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSI 186
+ G+ ++ V SSLV +Y KF+ + +VFDEMPERD +WNTVI+ ++ + ++
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKAL 193
Query: 187 QVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLY 246
++F M ++G + +S ++ + A + L L G I K GF D YV + LV +Y
Sbjct: 194 ELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY 253
Query: 247 SKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMV 306
KC + AR +F + + L+A+N+MI GY G+ +S V++ +++ G R S +T+
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 307 GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK 366
++ S +L I GY ++S ++ V+ +L +Y + E ++A +F ++ +
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH 426
+WN MIS Y G A+ ++ +M++ P+ VT T+ L AC+QL +L GK +H
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 427 QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGH 486
I LE + + +AL+DMY+KCGN EA ++F+S+ +K+ V+W +I YG HG
Sbjct: 434 LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR 493
Query: 487 EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACM 546
EAL F EM G+ P GVT L++L AC HAGL+ EG + F M +KY IEP+ EH++CM
Sbjct: 494 EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCM 553
Query: 547 VDILGRAGQLEKALEFIRTMPVEPGPA-VWGTLLGACKIHKNTDIARVASERLFELDPGS 605
+DILGRAG+L +A E I+ P A + TL AC +H + + L E P
Sbjct: 554 IDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDD 613
Query: 606 VGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHA 665
Y++L N+Y+ G ++ A +R K+ L K PGC+ IE++ F + DRSH A
Sbjct: 614 ASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRA 673
Query: 666 TAIYAMLEKLTGKM 679
+Y L L+G M
Sbjct: 674 ENVYECLALLSGHM 687
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/686 (32%), Positives = 357/686 (52%), Gaps = 15/686 (2%)
Query: 96 RTNLAPDNYTYAFTIAASPDDK---YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVG 152
+ ++ +Y+Y A + + +G LLH + ++ + + ++ +Y + +
Sbjct: 76 KAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLE 135
Query: 153 LARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVA 212
A K+FDEM E + V+ T+I+ D ++ +F M+A+G + S+ T+L ++
Sbjct: 136 DADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLV 195
Query: 213 ELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNA 272
+ L G I + G + + TG+V++Y KCG + A+ +F + +A
Sbjct: 196 NPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTG 255
Query: 273 MISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG 332
++ GYT G ++KLF +L+ G S ++ + L+L I K G
Sbjct: 256 LMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 333 AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQ 392
S SV T L Y + + + A + F E E +W+A+ISGY Q E A+ F+
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Query: 393 EMMTTEFTP-NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKC 451
+ + + N T T+ AC+ L + G VH ++L + Y +ALI MY+KC
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC 435
Query: 452 GNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSIL 511
G + +A ++F+SM + V W I G+ +G EAL+LF++M+ G+ P+ VTF+++L
Sbjct: 436 GCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVL 495
Query: 512 YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPG 571
ACSHAGLV +G+ M+ KY + P +H+ CM+DI R+G L++AL+F++ MP EP
Sbjct: 496 TACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPD 555
Query: 572 PAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREV 631
W L C HKN ++ +A E L +LDP YVL N+Y+ + +AA + ++
Sbjct: 556 AMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKL 615
Query: 632 AKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTS 691
+R L K C+ I+ G H F+ GD+ H IY L++ G M +Q
Sbjct: 616 MNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMT-- 673
Query: 692 LHDVEEEEKELMVNVHSEKLAIAFALITTEPG--TEIRIIKNLRVCLDCHTATKFISKIT 749
E +E +++ HSE+LAIAF LI+ I++ KNLR C DCH K +S +T
Sbjct: 674 ------ERREQLLD-HSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVT 726
Query: 750 ERVIVVRDANRFHHFKDGICSCGDYW 775
IV+RD+ RFHHFK+G CSC DYW
Sbjct: 727 GHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 387 ALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALID 446
A QEM + + + AC +L SLS G+ +H ++ P++ + ++
Sbjct: 67 AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQ 126
Query: 447 MYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVT 506
MY +C ++ +A +LFD MSE N V+ T+I Y G +A+ LF ML SG P
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 507 FLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
+ ++L + + + G +I H V + + +V++ + G L A M
Sbjct: 187 YTTLLKSLVNPRALDFGRQI-HAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 567 PVEPGPAVWGTLLGACKIHKNTDIARV 593
V+ A G ++G + + D ++
Sbjct: 246 AVKKPVACTGLMVGYTQAGRARDALKL 272
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 129/284 (45%), Gaps = 19/284 (6%)
Query: 7 IITFINKAC-NLPHL---AQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSV 62
+ + + KAC +L L QIHA + G +S+++ T L + A F +
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI 346
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYG 119
R P+ ++ ++ G+ + ++ + LR + +++TY A D G
Sbjct: 347 REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIG 406
Query: 120 MLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRN 179
+HA AI + + S+L+ +Y K + A +VF+ M D VAW I+G +
Sbjct: 407 GQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISG---H 463
Query: 180 CYY---DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
YY +++++F MV+ G++ +S T + VL A + V G CL + A
Sbjct: 464 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL--VEQGKHCLDTMLRKYNVA 521
Query: 237 YVL---TGLVSLYSKCGDISTA-RLLFGMIGKPDLIAYNAMISG 276
+ ++ +Y++ G + A + + M +PD +++ +SG
Sbjct: 522 PTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/763 (29%), Positives = 378/763 (49%), Gaps = 106/763 (13%)
Query: 119 GMLLHAHAIVDGF-GSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
G+ +H I G S+ V S+ + Y + +G A K+FDEMP+RD +AWN ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAY 237
R+ ++ ++++FR+M +G + +T+V +L + + G I + G +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 238 VLTGLVSLYSKCGDISTARLLFG-------------------------MIG--------- 263
+ L+ +YS+ G + +R +F IG
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 264 -KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC 322
KPD++ +N+++SGY G + ++ + + + ++G + S+S++ L+ + GHL L
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 323 SIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI------- 375
+I GY +++ + V T L +Y + + AR +FD K + AWN+++
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 376 ----------------------------SGYTQNGLTETALSLFQEMMTTEFTPNPVTIT 407
SGY G E AL + +M PN V+ T
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 408 TTLSACAQ--------------------------------LGSLSF---GKWVHQLIKSK 432
S C++ LG LS GK VH K
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 433 NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLF 492
NL + YV+TAL+DMY K G++ A ++F + K+ +WN ++ GY + G G E + F
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 493 KEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGR 552
ML +G+ P +TF S+L C ++GLV+EG + F M ++Y I P EH +CMVD+LGR
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 553 AGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLL 612
+G L++A +FI+TM ++P +WG L +CKIH++ ++A +A +RL L+P + Y+++
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMM 605
Query: 613 SNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAML 672
N+YS + IR + + ++ + I+I+ T H+F + ++H IY L
Sbjct: 606 INLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665
Query: 673 EKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNL 732
KL +M++ GY +T D+ + EKE ++ H+EKLA+ + LI + IR++KN
Sbjct: 666 YKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNT 725
Query: 733 RVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+C D HT K++S + R IV+++ R HHF+DG CSC D W
Sbjct: 726 NICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 1/212 (0%)
Query: 320 LTCSIQGYCVKSGAI-SNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGY 378
L +I G +K G S++ V +A Y R + A KLFDE P++ AWN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
++G E A+ LF+EM + T+ L C+ + G+ +H + LE N+
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS 498
+ +LI MY++ G + +R++F+SM ++N +WN+I+ Y GY +A+ L EM
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 499 GIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
G+ P VT+ S+L + GL ++ + M
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 29/294 (9%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
IH ++ N D+ T L G +AR +F + +I +N LV G S
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLV 142
+ AL + + + PD T+ +++ G+ + L +
Sbjct: 307 LKDAEALMIRME-KEGIKPDAITW------------------NSLASGYAT-LGKPEKAL 346
Query: 143 DLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDST 202
D+ K G+A V V+W + +G +N + ++++VF M GV ++
Sbjct: 347 DVIGKMKEKGVAPNV---------VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAA 397
Query: 203 TVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMI 262
T+ T+L + L L G + + DAYV T LV +Y K GD+ +A +F I
Sbjct: 398 TMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGI 457
Query: 263 GKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFG 316
L ++N M+ GY G E + F +L +G + T ++ V G
Sbjct: 458 KNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSG 511
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/532 (38%), Positives = 311/532 (58%), Gaps = 9/532 (1%)
Query: 250 GDISTARLLFGMI-GKPDLIAYNAMISGYTCNGEIESSVKLF-RELLVSGQRVSSSTMVG 307
G +S A+LLF P +N +I G++ + +S+ + R LL S R T
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 308 LIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKT 367
+ + I G ++SG + ++ V+T+L YS +++A K+FDE P +
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 368 VAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ 427
+ +WN MI ++ GL ALS+++ M + T+ LS+CA + +L+ G +H+
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 428 LIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHE 487
+ E ++VS ALIDMYAKCG++ A +F+ M +++ +TWN++I GYG+HG+G E
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVE 292
Query: 488 ALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMV 547
A+ F++M+ SG+ P+ +TFL +L CSH GLV+EG E F M +++ + P +H+ CMV
Sbjct: 293 AISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMV 352
Query: 548 DILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVG 607
D+ GRAGQLE +LE I P +W TLLG+CKIH+N ++ VA ++L +L+ + G
Sbjct: 353 DLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAG 412
Query: 608 YYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATA 667
YVL+++IYS + AS+R++ + L PG + IEI H FV D+ H +
Sbjct: 413 DYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAV 472
Query: 668 IYAMLEKLTGKMREIGYQTE----TVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPG 723
IY+ L ++ + GY+ E T +L D + HSEKLAIA+ L+ T G
Sbjct: 473 IYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSAD---TSHSEKLAIAYGLMRTTAG 529
Query: 724 TEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
T +RI KNLRVC DCH+ TK++SK R I+VRD RFHHF DGICSC DYW
Sbjct: 530 TTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 226/493 (45%), Gaps = 42/493 (8%)
Query: 1 MIQRNSIITFINKACN-LPHLAQIHAQLILNGYQSDLASITKLTQ--KLFDFGATRHARA 57
M ++ +I + + CN + L +IH+ +I+NG Q + L + + G+ HA+
Sbjct: 1 MCEKARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQL 60
Query: 58 LFFSV-RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD 116
LF +P +N L++GFS ++SP +SI Y + L + PD +T+ F + +
Sbjct: 61 LFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERI 120
Query: 117 K---YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVI 173
K + +H I GF + V +SLV Y V +A KVFDEMP RD V+WN +I
Sbjct: 121 KSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMI 180
Query: 174 TGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH 233
++ ++ +++ M GV DS T+V +L + A + L +G+ + +A
Sbjct: 181 CCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCE 240
Query: 234 RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL 293
+V L+ +Y+KCG + A +F + K D++ +N+MI GY +G ++ FR++
Sbjct: 241 SCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 294 LVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEI 353
+ SG R ++ T +GL+ L CS QG VK G +
Sbjct: 301 VASGVRPNAITFLGLL----------LGCSHQGL-VKEG-----------------VEHF 332
Query: 354 DMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSAC 413
++ F +P V + M+ Y + G E +L + E +PV T L +C
Sbjct: 333 EIMSSQFHLTP--NVKHYGCMVDLYGRAGQLENSLEMIYASSCHE---DPVLWRTLLGSC 387
Query: 414 AQLGSLSFGK-WVHQLIKSKNLEPNIYV-STALIDMYAKCGNISEARQLFDSMSEKNTVT 471
+L G+ + +L++ + YV T++ + R+L S +
Sbjct: 388 KIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPG 447
Query: 472 WNTIIFGYGLHGY 484
W+ I G +H +
Sbjct: 448 WSWIEIGDQVHKF 460
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 300/538 (55%), Gaps = 20/538 (3%)
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
DI+ + +F P L N MI ++ + +LFR L R +SS P
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSL-----RRNSSLPAN--P 113
Query: 311 VSSPF--------GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
+SS F G L I G G +S+S + T L +YS A K+FDE
Sbjct: 114 LSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDE 173
Query: 363 SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE---FTPNPVTITTTLSACAQLGSL 419
P++ +WN + S Y +N T L LF +M P+ VT L ACA LG+L
Sbjct: 174 IPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGAL 233
Query: 420 SFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGY 479
FGK VH I L + +S L+ MY++CG++ +A Q+F M E+N V+W +I G
Sbjct: 234 DFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGL 293
Query: 480 GLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVN-KYRIEP 538
++G+G EA++ F EML GI P T +L ACSH+GLV EG F M + +++I+P
Sbjct: 294 AMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKP 353
Query: 539 LAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERL 598
H+ C+VD+LGRA L+KA I++M ++P +W TLLGAC++H + ++ L
Sbjct: 354 NLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHL 413
Query: 599 FELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSG 658
EL G YVLL N YS + K +R + K++++ PGC+ IE+ GT H F+
Sbjct: 414 IELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVD 473
Query: 659 DRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVE-EEEKELMVNVHSEKLAIAFAL 717
D SH IY ML ++ +++ GY E + LH++E EEEK + HSEKLAIAF +
Sbjct: 474 DVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGI 533
Query: 718 ITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+ T PGT IR+ KNLR C+DCH KF+S + +R+++VRD +RFHHFK G CSC D+W
Sbjct: 534 LVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 208/479 (43%), Gaps = 48/479 (10%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGY--QSDLAS--ITKLTQKLFDFGATRHARALFF 60
+ +++ I + HL QIHA L+ SD+ +++L L R F
Sbjct: 12 DHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRV--F 69
Query: 61 SVR-NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDD 116
S R NP + N +++ FS++ +P L+ LR ++L + + +F + S D
Sbjct: 70 SQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDL 129
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
G+ +H DGF S+ + ++L+DLY A KVFDE+P+RDTV+WN + +
Sbjct: 130 LGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCY 189
Query: 177 VRNCYYDDSIQVFRDM---VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH 233
+RN D + +F M V V+ D T + L A A L L G + + G
Sbjct: 190 LRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLS 249
Query: 234 RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL 293
+ LVS+YS+CG + A +F + + +++++ A+ISG NG + +++ F E+
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
Query: 294 LVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEI 353
L G T+ GL+ C SG ++ + + R+
Sbjct: 310 LKFGISPEEQTLTGLLSA----------------CSHSGLVAEGMM------FFDRMRSG 347
Query: 354 DMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSAC 413
+ K + + ++ + L + A SL + M E P+ T L AC
Sbjct: 348 EFKIK-------PNLHHYGCVVDLLGRARLLDKAYSLIKSM---EMKPDSTIWRTLLGAC 397
Query: 414 AQLGSLSFGKWV-HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVT 471
G + G+ V LI+ K E YV L++ Y+ G + +L M EK T
Sbjct: 398 RVHGDVELGERVISHLIELKAEEAGDYV--LLLNTYSTVGKWEKVTELRSLMKEKRIHT 454
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/535 (38%), Positives = 311/535 (58%), Gaps = 1/535 (0%)
Query: 242 LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
L++ Y + GD+ AR +F + L +NAMI+G E + LFRE+ G
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
T+ + S+ + + I GY +K G + V+++L +Y R ++ +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
P + + AWN +I G QNG ET L L++ M + PN +T T LS+C+ L
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
G+ +H + V ++LI MY+KCG + +A + F +++ V W+++I YG
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 482 HGYGHEALKLFKEML-HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLA 540
HG G EA++LF M + + + V FL++LYACSH+GL +G E+F MV KY +P
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330
Query: 541 EHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFE 600
+H+ C+VD+LGRAG L++A IR+MP++ +W TLL AC IHKN ++A+ + + +
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Query: 601 LDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDR 660
+DP YVLL+N+++ + + + +R+ + + + K G + E G H F GDR
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 450
Query: 661 SHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITT 720
S S + IY+ L++LT +M+ GY+ +T + LHD++EEEKE + HSEKLA+AFAL+
Sbjct: 451 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 510
Query: 721 EPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
G IRIIKNLRVC DCH A K+IS I R I +RD +RFHHF +G CSCGDYW
Sbjct: 511 PEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 186/391 (47%), Gaps = 6/391 (1%)
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
N + L++ Y + + ARKVFDEMP+R WN +I GL++ + ++ + +FR+M
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 194 ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIS 253
G D T+ +V A L+ + +G I K+G D V + L +Y + G +
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 254 TARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS 313
++ + +L+A+N +I G NG E+ + L++ + +SG R + T V ++ S
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 314 PFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNA 373
I +K GA S +V ++L ++YS+ + A K F E ++ W++
Sbjct: 204 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 263
Query: 374 MISGYTQNGLTETALSLFQEMM-TTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKS 431
MIS Y +G + A+ LF M T N V L AC+ G G + +++
Sbjct: 264 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGYGLHGYGHEALK 490
+P + T ++D+ + G + +A + SM K + V W T++ +H A +
Sbjct: 324 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 383
Query: 491 LFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
+FKE+L I P+ + +L A HA R
Sbjct: 384 VFKEILQ--IDPND-SACYVLLANVHASAKR 411
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 2/256 (0%)
Query: 336 NSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMM 395
N S L Y R ++ ARK+FDE P++ + WNAMI+G Q E LSLF+EM
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 396 TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNIS 455
F+P+ T+ + S A L S+S G+ +H LE ++ V+++L MY + G +
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 456 EARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACS 515
+ + SM +N V WNT+I G +G L L+K M SG P+ +TF+++L +CS
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 516 HAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVW 575
+ +G++I + + K + + ++ + + G L A + E +W
Sbjct: 204 DLAIRGQGQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED-EVMW 261
Query: 576 GTLLGACKIHKNTDIA 591
+++ A H D A
Sbjct: 262 SSMISAYGFHGQGDEA 277
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 176/410 (42%), Gaps = 31/410 (7%)
Query: 8 ITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDI 67
++ +K + P ++ ++ Y S I + G +AR +F + + +
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRA----GDLVNARKVFDEMPDRKL 56
Query: 68 FLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK---YGMLLHA 124
+N ++ G ++L+ + +PD YT + S + G +H
Sbjct: 57 TTWNAMIAGLIQFEFNEEGLSLFREMH-GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHG 115
Query: 125 HAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDD 184
+ I G +L V SSL +Y + ++ V MP R+ VAWNT+I G +N +
Sbjct: 116 YTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET 175
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVS 244
+ +++ M +G + + T VTVL + ++L G G I A K G V++ L+S
Sbjct: 176 VLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLIS 235
Query: 245 LYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSST 304
+YSKCG + A F D + +++MIS Y +G+ + +++LF + + T
Sbjct: 236 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM-------AEQT 288
Query: 305 MVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVS-----------TALTTIYSRLNEI 353
+ + V+ F +L CS G K + + V T + + R +
Sbjct: 289 NMEINEVA--FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 346
Query: 354 DMARKLFDESPEKT-VAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
D A + P KT + W ++S + E A +F+E++ + PN
Sbjct: 347 DQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL--QIDPN 394
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/667 (32%), Positives = 356/667 (53%), Gaps = 8/667 (1%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q+ + L+ +G+ D+ T L G +AR +F ++ + ++ G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYGMLLHAHAIVDGFGSNLFVC 138
S+ L+ L + N+ PD Y + ++A P + G +HAH + G + +
Sbjct: 229 RSYVSLQLFYQL-MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+ L+D Y K RV A K+F+ MP ++ ++W T+++G +N + +++++F M G++
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
D ++L + A L LG G + K D+YV L+ +Y+KC ++ AR +
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 259 FGMIGKPDLIAYNAMISGYTCNG---EIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
F + D++ +NAMI GY+ G E+ ++ +FR++ R S T V L+ S+
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
L L+ I G K G + +AL +YS + +R +FDE K + WN+M
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 376 SGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE 435
+GY Q E AL+LF E+ + P+ T ++A L S+ G+ H + + LE
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 436 PNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM 495
N Y++ AL+DMYAKCG+ +A + FDS + ++ V WN++I Y HG G +AL++ ++M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 496 LHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQ 555
+ GI P+ +TF+ +L ACSHAGLV +G + F M+ ++ IEP EH+ CMV +LGRAG+
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGR 706
Query: 556 LEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNI 615
L KA E I MP +P VW +LL C N ++A A+E DP G + +LSNI
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNI 766
Query: 616 YSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKL 675
Y+ + +A +RE K + K PG + I IN H+F+S D+SH A IY +L+ L
Sbjct: 767 YASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Query: 676 TGKMREI 682
++R +
Sbjct: 827 LVQIRGV 833
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 219/423 (51%), Gaps = 7/423 (1%)
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
Y ++H IV G + ++ + L++LY + + ARKVF++MPER+ V+W+T+++
Sbjct: 62 YQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACN 121
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVV-TVLPAVAELQELGVGMGIQCLAF--KFGFHR 234
+ Y++S+ VF + + ++ + + A + L G M Q +F K GF R
Sbjct: 122 HHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDR 181
Query: 235 DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
D YV T L+ Y K G+I ARL+F + + + + MISG G S++LF +L+
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
+ ++ S L I + ++ G ++S+ L Y + +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 355 MARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
A KLF+ P K + +W ++SGY QN L + A+ LF M P+ ++ L++CA
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 415 QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNT 474
L +L FG VH NL + YV+ +LIDMYAKC +++AR++FD + + V +N
Sbjct: 362 SLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNA 421
Query: 475 IIFGY---GLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMV 531
+I GY G HEAL +F++M I PS +TF+S+L A + + ++I H ++
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI-HGLM 480
Query: 532 NKY 534
KY
Sbjct: 481 FKY 483
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 144/277 (51%), Gaps = 12/277 (4%)
Query: 318 LHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISG 377
LH + G + G ++ +S L +YSR + ARK+F++ PE+ + +W+ M+S
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 378 YTQNGLTETALSLFQEMM-TTEFTPNPVTITTTLSACAQLGSLSFGKW-VHQL---IKSK 432
+G+ E +L +F E T + +PN +++ + AC+ L G+W V QL +
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWMVFQLQSFLVKS 177
Query: 433 NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLF 492
+ ++YV T LID Y K GNI AR +FD++ EK+TVTW T+I G G + +L+LF
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 493 KEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGR 552
+++ + P G ++L ACS + G++I H + +Y +E A ++D +
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI-HAHILRYGLEMDASLMNVLIDSYVK 296
Query: 553 AGQLEKALEFIRTMPVEPGPAVWGTLLGACK---IHK 586
G++ A + MP W TLL K +HK
Sbjct: 297 CGRVIAAHKLFNGMP-NKNIISWTTLLSGYKQNALHK 332
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/611 (32%), Positives = 340/611 (55%), Gaps = 8/611 (1%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLR-TNLAPDNYTYAF 108
G +AR LF + + +N++++ + +I+++ + PD YTY F
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 109 TIAASPD---DKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERD 165
A+ + K G+++H + FG + +V ++L+ +Y F +V +AR VFD M RD
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 166 TVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQC 225
++WNT+I+G RN Y +D++ +F MV V +D T+V++LP L++L +G +
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 226 LAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIES 285
L + V LV++Y KCG + AR +F + + D+I + MI+GYT +G++E+
Sbjct: 243 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVEN 302
Query: 286 SVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTT 345
+++L R + G R ++ T+ L+ V ++ + G+ V+ S+ + T+L +
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 362
Query: 346 IYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
+Y++ +D+ ++F + + W+A+I+G QN L AL LF+ M + PN T
Sbjct: 363 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 422
Query: 406 ITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
+ + L A A L L +H + ++ +T L+ +Y+KCG + A ++F+ +
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 466 EK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
EK + V W +I GYG+HG GH AL++F EM+ SG+ P+ +TF S L ACSH+GLV
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVE 542
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
EG +F M+ Y+ + H+ C+VD+LGRAG+L++A I T+P EP VWG LL A
Sbjct: 543 EGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 582 CKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTP 641
C H+N + +A+ +LFEL+P + G YVLL+NIY+ + +R + + L K P
Sbjct: 603 CVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKP 662
Query: 642 GCTLIEINGTT 652
G + IEI +
Sbjct: 663 GHSTIEIRSNS 673
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 332/639 (51%), Gaps = 69/639 (10%)
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
Y +HA I GF + +F+ + L+D Y K + R+VFD+MP+R+ WN+V+TGL
Sbjct: 38 YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 178 RNCYYDDSIQVFRDMV-------------------------------ANGVQVDSTTVVT 206
+ + D++ +FR M G ++ + +
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 207 VLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPD 266
VL A + L ++ G+ + L K F D Y+ + LV +YSKCG+++ A+ +F +G +
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 267 LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQG 326
++++N++I+ + NG ++ +F+ +L S T+ +I + + + + G
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 327 YCVKSGAISNSSV-STALTTIYSRLNEIDMARKLFDESP--------------------- 364
VK+ + N + S A +Y++ + I AR +FD P
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 365 ----------EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
E+ V +WNA+I+GYTQNG E ALSLF + P + L ACA
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 415 QLGSLSFGKWVH-QLIK-----SKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKN 468
L L G H ++K E +I+V +LIDMY KCG + E +F M E++
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 469 TVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
V+WN +I G+ +GYG+EAL+LF+EML SG P +T + +L AC HAG V EG F
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 529 DMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNT 588
M + + PL +H+ CMVD+LGRAG LE+A I MP++P +WG+LL ACK+H+N
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 589 DIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEI 648
+ + +E+L E++P + G YVLLSN+Y+ + ++R+ +K + K PGC+ I+I
Sbjct: 578 TLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Query: 649 NGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTE 687
G HVF+ D+SH I+++L+ L +MR TE
Sbjct: 638 QGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 244/522 (46%), Gaps = 48/522 (9%)
Query: 4 RNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR 63
+N +I +K +L Q+ ++ Q ++ + + L G A +LF S+
Sbjct: 58 QNRLIDAYSKCGSLEDGRQVFDKMP----QRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 64 NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGM 120
D +N +V GF+ + ++ + + + + Y++A ++A D G+
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMH-KEGFVLNEYSFASVLSACSGLNDMNKGV 172
Query: 121 LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNC 180
+H+ F S++++ S+LVD+Y K V A++VFDEM +R+ V+WN++IT +N
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLT 240
+++ VF+ M+ + V+ D T+ +V+ A A L + VG + K R+ +L+
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 241 -GLVSLYSKCGDI-------------------------------STARLLFGMIGKPDLI 268
V +Y+KC I ARL+F + + +++
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 269 AYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSI---- 324
++NA+I+GYT NGE E ++ LF L + + ++ + LHL
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 325 --QGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNG 382
G+ +SG + V +L +Y + ++ +F + E+ +WNAMI G+ QNG
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 383 LTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGK-WVHQLIKSKNLEPNIYVS 441
AL LF+EM+ + P+ +T+ LSAC G + G+ + + + + P
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 442 TALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLH 482
T ++D+ + G + EA+ + + M + ++V W +++ +H
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/640 (32%), Positives = 354/640 (55%), Gaps = 8/640 (1%)
Query: 49 FGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAF 108
F ++ AR +F + ++ +N L+K S + ++H+ R PDN+T
Sbjct: 7 FSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHM-FRDEEKPDNFTLPV 65
Query: 109 TIAASPDDK---YGMLLHAHAIVD-GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER 164
+ A + + YG ++H D GS+L+V SSL+ +Y K R+ A ++FDE+ +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 165 DTVAWNTVITGLVRNCYYDDSIQVFRDMV-ANGVQVDSTTVVTVLPAVAELQELGVGMGI 223
D V W+++++G +N +++ FR MV A+ V D T++T++ A +L +G +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 224 QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEI 283
+ GF D ++ L++ Y+K A LF MI + D+I+++ +I+ Y NG
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 284 ESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTAL 343
++ +F +++ G + +T++ ++ + L ++ G + VSTAL
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 344 TTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFT-PN 402
+Y + + A +F P K V +W A+ISG+T NG+ ++ F M+ T P+
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
+ + L +C++LG L K H + + N ++ +L+++Y++CG++ A ++F+
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 463 SMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG-IHPSGVTFLSILYACSHAGLVR 521
++ K+TV W ++I GYG+HG G +AL+ F M+ S + P+ VTFLSIL ACSHAGL+
Sbjct: 426 GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 485
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
EG IF MVN YR+ P EH+A +VD+LGR G L+ A+E + MP P P + GTLLGA
Sbjct: 486 EGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA 545
Query: 582 CKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTP 641
C+IH+N ++A +++LFEL+ GYY+L+SN+Y V + +R K+R + K
Sbjct: 546 CRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605
Query: 642 GCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMRE 681
+LIEI H FV+ D H +Y +L++L M+E
Sbjct: 606 AESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKE 645
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 220/442 (49%), Gaps = 5/442 (1%)
Query: 147 KFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVT 206
KFS AR++F EM +R WNT++ L R +++ + F M + + D+ T+
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 207 VLPAVAELQELGVGMGIQCLAFK-FGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKP 265
L A EL+E+ G I K D YV + L+ +Y KCG + A +F + KP
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 266 DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSS-TMVGLIPVSSPFGHLHLTCSI 324
D++ +++M+SG+ NG +V+ FR ++++ T++ L+ + + L +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 325 QGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLT 384
G+ ++ G ++ S+ +L Y++ A LF EK V +W+ +I+ Y QNG
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTAL 444
AL +F +MM PN T+ L ACA L G+ H+L K LE + VSTAL
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 445 IDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM-LHSGIHPS 503
+DMY KC + EA +F + K+ V+W +I G+ L+G H +++ F M L + P
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 504 GVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFI 563
+ + +L +CS G + E + FH V KY + A +V++ R G L A +
Sbjct: 366 AILMVKVLGSCSELGFL-EQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 564 RTMPVEPGPAVWGTLLGACKIH 585
+ ++ VW +L+ IH
Sbjct: 425 NGIALKD-TVVWTSLITGYGIH 445
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 212/437 (48%), Gaps = 6/437 (1%)
Query: 34 SDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHL 93
SDL + L G A +F + PDI ++ +V GF N SP ++ + +
Sbjct: 94 SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRM 153
Query: 94 RLRTNLAPDNYTYAFTIAAS---PDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSR 150
+ +++ PD T ++A + + G +H I GF ++L + +SL++ Y K
Sbjct: 154 VMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA 213
Query: 151 VGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPA 210
A +F + E+D ++W+TVI V+N +++ VF DM+ +G + + TV+ VL A
Sbjct: 214 FKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQA 273
Query: 211 VAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAY 270
A +L G LA + G + V T LV +Y KC A +F I + D++++
Sbjct: 274 CAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSW 333
Query: 271 NAMISGYTCNGEIESSVKLFRELLVSGQ-RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCV 329
A+ISG+T NG S++ F +L+ R + MV ++ S G L Y +
Sbjct: 334 VALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVI 393
Query: 330 KSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALS 389
K G SN + +L +YSR + A K+F+ K W ++I+GY +G AL
Sbjct: 394 KYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALE 453
Query: 390 LFQEMM-TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQL-IKSKNLEPNIYVSTALIDM 447
F M+ ++E PN VT + LSAC+ G + G + +L + L PN+ L+D+
Sbjct: 454 TFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDL 513
Query: 448 YAKCGNISEARQLFDSM 464
+ G++ A ++ M
Sbjct: 514 LGRVGDLDTAIEITKRM 530
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 170/371 (45%), Gaps = 10/371 (2%)
Query: 3 QRNSIITFINKACNLPH--LAQ-IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALF 59
R ++IT ++ L + L + +H +I G+ +DL+ + L A + A LF
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 60 FSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDD 116
+ D+ ++ ++ + N + + ++ ++ + + P+ T + AA+ D
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDM-MDDGTEPNVATVLCVLQACAAAHDL 280
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
+ G H AI G + + V ++LVD+Y K A VF +P +D V+W +I+G
Sbjct: 281 EQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGF 340
Query: 177 VRNCYYDDSIQVFRDM-VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
N SI+ F M + N + D+ +V VL + +EL L K+GF +
Sbjct: 341 TLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSN 400
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
++ LV LYS+CG + A +F I D + + ++I+GY +G+ +++ F ++
Sbjct: 401 PFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVK 460
Query: 296 SGQ-RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAIS-NSSVSTALTTIYSRLNEI 353
S + + + T + ++ S G +H I V ++ N L + R+ ++
Sbjct: 461 SSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDL 520
Query: 354 DMARKLFDESP 364
D A ++ P
Sbjct: 521 DTAIEITKRMP 531
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/676 (31%), Positives = 362/676 (53%), Gaps = 8/676 (1%)
Query: 13 KAC-NLPHLA---QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIF 68
KAC +L L+ IH Q+++NG+ SD + L FG HAR +F +R D+
Sbjct: 54 KACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVV 113
Query: 69 LFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIV 128
+ ++ +S + +L +R + + P T ++ + LH A++
Sbjct: 114 HWTAMIGCYSRAGIVGEACSLVNEMRFQ-GIKPGPVTLLEMLSGVLEITQLQCLHDFAVI 172
Query: 129 DGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQV 188
GF ++ V +S+++LY K VG A+ +FD+M +RD V+WNT+I+G + +++
Sbjct: 173 YGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKL 232
Query: 189 FRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSK 248
M +G++ D T L + +L +G + C K GF D ++ T L+++Y K
Sbjct: 233 LYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLK 292
Query: 249 CGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGL 308
CG + + I D++ + MISG G E ++ +F E+L SG +SS + +
Sbjct: 293 CGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASV 352
Query: 309 IPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTV 368
+ + G L S+ GY ++ G ++ +L T+Y++ +D + +F+ E+ +
Sbjct: 353 VASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDL 412
Query: 369 AAWNAMISGYTQNGLTETALSLFQEM-MTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ 427
+WNA+ISGY QN AL LF+EM T + T+ + L AC+ G+L GK +H
Sbjct: 413 VSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHC 472
Query: 428 LIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHE 487
++ + P V TAL+DMY+KCG + A++ FDS+S K+ V+W +I GYG HG G
Sbjct: 473 IVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDI 532
Query: 488 ALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMV 547
AL+++ E LHSG+ P+ V FL++L +CSH G+V++G +IF MV + +EP EH AC+V
Sbjct: 533 ALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVV 592
Query: 548 DILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVG 607
D+L RA ++E A +F + P V G +L AC+ + T++ + E + EL PG G
Sbjct: 593 DLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAG 652
Query: 608 YYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATA 667
+YV L + ++ + + + + L K PG + IE+NG T F SHS T
Sbjct: 653 HYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTV 712
Query: 668 IYAMLEKLTGKMREIG 683
++L+ L+ +M + G
Sbjct: 713 --SLLKLLSREMMQFG 726
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 196/427 (45%), Gaps = 7/427 (1%)
Query: 166 TVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQC 225
T +N+ I L + + + F M+AN + D+ T ++L A A LQ L G+ I
Sbjct: 11 TKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQ 70
Query: 226 LAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIES 285
GF D Y+ + LV+LY+K G ++ AR +F + + D++ + AMI Y+ G +
Sbjct: 71 QVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGE 130
Query: 286 SVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTT 345
+ L E+ G + T++ ++ S L C + + V G + +V ++
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEML--SGVLEITQLQC-LHDFAVIYGFDCDIAVMNSMLN 187
Query: 346 IYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
+Y + + + A+ LFD+ ++ + +WN MISGY G L L M P+ T
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 406 ITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
+LS + L G+ +H I + ++++ TALI MY KCG + ++ +++
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP 307
Query: 466 EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEE 525
K+ V W +I G G +AL +F EML SG S S++ +C+ G G
Sbjct: 308 NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGAS 367
Query: 526 IFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH 585
+ H V ++ ++ + + G L+K+L M E W ++
Sbjct: 368 V-HGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG--YA 423
Query: 586 KNTDIAR 592
+N D+ +
Sbjct: 424 QNVDLCK 430
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/644 (34%), Positives = 352/644 (54%), Gaps = 10/644 (1%)
Query: 10 FINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFL 69
++K N+ L Q H L NG D++ TKL FG T+ AR +F + PD +L
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 70 FNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYGMLLHAHA 126
+ V+++ + +N + LY L ++ D+ ++ + A D G +H
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYD-LLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQL 168
Query: 127 I-VDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDS 185
+ V F + V + L+D+Y K + A KVF+++ R+ V W ++I G V+N ++
Sbjct: 169 VKVPSFDN--VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
+ +F M N V + T T++ A +L L G K G + ++T L+ +
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM 305
Y KCGDIS AR +F DL+ + AMI GYT NG + ++ LF+++ + + T+
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 306 VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPE 365
++ +L L S+ G +K G I +++V+ AL +Y++ + A+ +F+ E
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESE 405
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
K + AWN++ISG++QNG AL LF M + TPN VT+ + SACA LGSL+ G +
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 426 HQL-IKSKNL-EPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHG 483
H +K L +++V TAL+D YAKCG+ AR +FD++ EKNT+TW+ +I GYG G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQG 525
Query: 484 YGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHH 543
+L+LF+EML P+ TF SIL AC H G+V EG++ F M Y P +H+
Sbjct: 526 DTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY 585
Query: 544 ACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDP 603
CMVD+L RAG+LE+AL+ I MP++P +G L C +H D+ + +++ +L P
Sbjct: 586 TCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHP 645
Query: 604 GSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIE 647
YYVL+SN+Y+ + +A +R + K+R L+K G + +E
Sbjct: 646 DDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/546 (35%), Positives = 315/546 (57%), Gaps = 12/546 (2%)
Query: 238 VLTGLVSLYSKCGDISTARLLFGMIGKPDLI---AYNAMISGYTCNGEIESSVKLFRELL 294
+L+ L++L+S C + AR +F + L+ + AM GY+ NG ++ ++ ++L
Sbjct: 169 LLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML 228
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
S + ++ + L + I VK + V L +Y D
Sbjct: 229 CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFD 288
Query: 355 MARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
ARK+FD E+ V WN++IS ++ +LF++M + T+TT L AC+
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Query: 415 QLGSLSFGKWVH-QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWN 473
++ +L GK +H Q++KSK +P++ + +L+DMY KCG + +R++FD M K+ +WN
Sbjct: 349 RVAALLTGKEIHAQILKSKE-KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWN 407
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
++ Y ++G E + LF+ M+ SG+ P G+TF+++L CS GL G +F M +
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTE 467
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARV 593
+R+ P EH+AC+VDILGRAG++++A++ I TMP +P ++WG+LL +C++H N + +
Sbjct: 468 FRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEI 527
Query: 594 ASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTH 653
A++ LF L+P + G YV++SNIY+ + + IRE+ K+R + K GC+ +++
Sbjct: 528 AAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQ 587
Query: 654 VFVSGD----RSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSE 709
+FV+G R+ ++ L++ K GY T LHDV+EE K V HSE
Sbjct: 588 IFVAGGGYEFRNSDEYKKVWTELQEAIEKS---GYSPNTSVVLHDVDEETKANWVCGHSE 644
Query: 710 KLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGIC 769
+LA ++LI T G IRI KNLRVC DCH+ K +S++T RVIV+RD RFHHF DGIC
Sbjct: 645 RLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGIC 704
Query: 770 SCGDYW 775
SC DYW
Sbjct: 705 SCKDYW 710
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 173/350 (49%), Gaps = 5/350 (1%)
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTV---AWNTVITGLVRNCYYDDSIQVFRDMVAN 195
S L+ L+ R+ LARK+FD++ + + W + G RN D++ V+ DM+ +
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 196 GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA 255
++ + ++ L A +L++L VG GI K D V L+ LY + G A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 256 RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
R +F + + +++ +N++IS + + LFR++ S +T+ ++P S
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
L I +KS + + +L +Y + E++ +R++FD K +A+WN M+
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 376 SGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NL 434
+ Y NG E ++LF+ M+ + P+ +T LS C+ G +G + + +K++ +
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVT-WNTIIFGYGLHG 483
P + L+D+ + G I EA ++ ++M K + + W +++ LHG
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 177/403 (43%), Gaps = 16/403 (3%)
Query: 27 LILNGYQSDLASITKLTQKLFD-FGATRH---ARALFFSVRNPDIF---LFNVLVKGFSV 79
LILN L KL KL F R AR +F V + + ++ + G+S
Sbjct: 156 LILN--NPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSR 213
Query: 80 NASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK---YGMLLHAHAIVDGFGSNLF 136
N SP ++ +Y + L + + P N++ + + A D K G +HA + +
Sbjct: 214 NGSPRDALIVYVDM-LCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQV 272
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG 196
V + L+ LY + ARKVFD M ER+ V WN++I+ L + + +FR M
Sbjct: 273 VYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM 332
Query: 197 VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTAR 256
+ T+ T+LPA + + L G I K D +L L+ +Y KCG++ +R
Sbjct: 333 IGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSR 392
Query: 257 LLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFG 316
+F ++ DL ++N M++ Y NG IE + LF ++ SG T V L+ S G
Sbjct: 393 RVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTG 452
Query: 317 HLHLTCSIQGYCVKSGAISNSSVSTA-LTTIYSRLNEIDMARKLFDESPEKTVAA-WNAM 374
S+ +S + A L I R +I A K+ + P K A+ W ++
Sbjct: 453 LTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSL 512
Query: 375 ISGYTQNGLTETALSLFQEMMTTE-FTPNPVTITTTLSACAQL 416
++ +G +E+ E P + + + A A++
Sbjct: 513 LNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKM 555
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/428 (42%), Positives = 268/428 (62%), Gaps = 4/428 (0%)
Query: 349 RLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMT-TEFTPNPVTIT 407
++ E +A+K+ + ++ V WN MI GY +N E AL + M++ T+ PN +
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 408 TTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK 467
++L+ACA+LG L KWVH L+ +E N +S+AL+D+YAKCG+I +R++F S+
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 468 NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIF 527
+ WN +I G+ HG EA+++F EM + P +TFL +L CSH GL+ EG+E F
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF 289
Query: 528 HDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKN 587
M ++ I+P EH+ MVD+LGRAG++++A E I +MP+EP +W +LL + + +KN
Sbjct: 290 GLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKN 349
Query: 588 TDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIE 647
++ +A + L + G YVLLSNIYS + + A +RE+ K + K G + +E
Sbjct: 350 PELGEIAIQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
Query: 648 INGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVH 707
G H F +GD SH AIY +LE L K + G+ ++T L DV EEEKE +N H
Sbjct: 407 FGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYH 466
Query: 708 SEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDG 767
SEKLA+A+ ++ + PGTEIRI KN+R+C DCH K +SK+ RVI++RD RFH F+DG
Sbjct: 467 SEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDG 526
Query: 768 ICSCGDYW 775
+CSC DYW
Sbjct: 527 LCSCRDYW 534
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 117/232 (50%), Gaps = 3/232 (1%)
Query: 248 KCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL-VSGQRVSSSTMV 306
K G+ A+ + ++I +N MI GY N + E ++K + +L + + + +
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 307 GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK 366
+ + G LH + + SG N+ +S+AL +Y++ +I +R++F
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH 426
V+ WNAMI+G+ +GL A+ +F EM +P+ +T L+ C+ G L GK
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF 289
Query: 427 QLIKSK-NLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTII 476
L+ + +++P + A++D+ + G + EA +L +SM E + V W +++
Sbjct: 290 GLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 6/254 (2%)
Query: 141 LVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA-NGVQV 199
+++ K GLA+KV +++ + WN +I G VRN Y+++++ ++M++ ++
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 200 DSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF 259
+ + + L A A L +L + L G +A + + LV +Y+KCGDI T+R +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 260 GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 319
+ + D+ +NAMI+G+ +G ++++F E+ S T +GL+ S G L
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 320 LTCSIQGYCVKSGAISNS-SVSTALTTIYSRLNEIDMARKLFDESP-EKTVAAWNAMISG 377
G + +I A+ + R + A +L + P E V W +++S
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 378 ---YTQNGLTETAL 388
Y L E A+
Sbjct: 344 SRTYKNPELGEIAI 357
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 10/270 (3%)
Query: 13 KACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNV 72
+ CN +LA+ L + +I + + L G + A+ + + + ++ +N+
Sbjct: 76 RRCNRSYLAR-RLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNL 134
Query: 73 LVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHAIVD 129
++ G+ N ++ ++ T++ P+ +++A ++AA D + +H+ I
Sbjct: 135 MIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDS 194
Query: 130 GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVF 189
G N + S+LVD+Y K +G +R+VF + D WN +ITG + ++I+VF
Sbjct: 195 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 254
Query: 190 RDMVANGVQVDSTTVVTVLPAVAE---LQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLY 246
+M A V DS T + +L + L+E G+ F + Y +V L
Sbjct: 255 SEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY--GAMVDLL 312
Query: 247 SKCGDISTA-RLLFGMIGKPDLIAYNAMIS 275
+ G + A L+ M +PD++ + +++S
Sbjct: 313 GRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 433 NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLF 492
+L P + +I+ K G A+++ + S++N +TWN +I GY + EALK
Sbjct: 93 SLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKAL 152
Query: 493 KEMLH-SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILG 551
K ML + I P+ +F S L AC+ G + + + H ++ IE A + +VD+
Sbjct: 153 KNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWV-HSLMIDSGIELNAILSSALVDVYA 211
Query: 552 RAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHK-NTDIARVASERLFE-LDPGSVGYY 609
+ G + + E ++ ++W ++ H T+ RV SE E + P S+ +
Sbjct: 212 KCGDIGTSREVFYSVK-RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFL 270
Query: 610 VLLSNIYSVG 619
LL+ G
Sbjct: 271 GLLTTCSHCG 280
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/556 (36%), Positives = 314/556 (56%), Gaps = 1/556 (0%)
Query: 220 GMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTC 279
G+ + K G V L++ YSK +R F + ++++IS +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 280 NGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSV 339
N S++ ++++ R + + + S+ +K+G ++ V
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 340 STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEF 399
++L +Y++ EI ARK+FDE P++ V W+ M+ GY Q G E AL LF+E +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 400 TPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQ 459
N + ++ +S CA L G+ +H L + + + +V ++L+ +Y+KCG A Q
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 460 LFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGL 519
+F+ + KN WN ++ Y H + + ++LFK M SG+ P+ +TFL++L ACSHAGL
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 520 VREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
V EG F D + + RIEP +H+A +VD+LGRAG+L++ALE I MP++P +VWG LL
Sbjct: 334 VDEGRYYF-DQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 580 GACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAK 639
+C +HKNT++A A++++FEL P S G ++ LSN Y+ F AA R++ + R K
Sbjct: 393 TSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 640 TPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEE 699
G + +E H F +G+R H + IY L +L +M + GY +T L +V+ +E
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDE 512
Query: 700 KELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDAN 759
K + HSE+LAIAF LIT IR++KNLRVC DCH A KF+S T RVI+VRD N
Sbjct: 513 KNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNN 572
Query: 760 RFHHFKDGICSCGDYW 775
RFH F+DG CSC DYW
Sbjct: 573 RFHRFEDGKCSCNDYW 588
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 187/365 (51%), Gaps = 1/365 (0%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G+ LH + + G V ++L++ Y K +R+ F++ P++ + W+++I+ +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
N S++ + M+A ++ D + + + A L +G + CL+ K G+ D +V
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
+ LV +Y+KCG+I AR +F + + +++ ++ M+ GY GE E ++ LF+E L
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
V+ + +I V + L L I G +KS S+S V ++L ++YS+ + A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
+F+E P K + WNAM+ Y Q+ T+ + LF+ M + PN +T L+AC+ G
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIF 477
+ G++ +K +EP +L+DM + G + EA ++ +M + W ++
Sbjct: 334 VDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
Query: 478 GYGLH 482
+H
Sbjct: 394 SCTVH 398
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
+H + GY +D+ + L G +AR +F + ++ ++ ++ G++
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLLHAHAIVDGFGSNLFVCS 139
++ L+ L NLA ++Y+++ I+ + + G +H +I F S+ FV S
Sbjct: 198 NEEALWLFKEA-LFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGS 256
Query: 140 SLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQV 199
SLV LY K A +VF+E+P ++ WN ++ ++ + I++F+ M +G++
Sbjct: 257 SLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKP 316
Query: 200 DSTTVVTVLPAVA 212
+ T + VL A +
Sbjct: 317 NFITFLNVLNACS 329
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/583 (35%), Positives = 312/583 (53%), Gaps = 45/583 (7%)
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMI--GKPDLIAYNAMISGYTCNGEIESSVKLFREL 293
+Y+ L Y+ G++ TA+ LF I + D + + ++S ++ G + +S+KLF E+
Sbjct: 43 SYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM 102
Query: 294 LVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSR---- 349
+ ++V L V + L G VK G +++ V AL +Y +
Sbjct: 103 RRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLV 162
Query: 350 ---------LNE------------------IDMARKLFDESPEKTVAAWNAMISGYTQNG 382
L E ++ R++F E PE+ AW M++GY G
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 383 LTETALSLFQEMM-TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE------ 435
T L L EM+ N VT+ + LSACAQ G+L G+WVH K +
Sbjct: 223 FTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEAS 282
Query: 436 -PNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKE 494
++ V TAL+DMYAKCGNI + +F M ++N VTWN + G +HG G + +F +
Sbjct: 283 YDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQ 342
Query: 495 MLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG 554
M+ + P +TF ++L ACSH+G+V EG FH + Y +EP +H+ACMVD+LGRAG
Sbjct: 343 MIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAG 400
Query: 555 QLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSN 614
+E+A +R MPV P V G+LLG+C +H +IA L ++ PG+ Y +L+SN
Sbjct: 401 LIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSN 460
Query: 615 IYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEK 674
+Y A +R +KR + K PG + I +N + H F SGDRSH IY L +
Sbjct: 461 MYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNE 520
Query: 675 LTGKMREIGYQTET--VTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNL 732
+ ++R GY + + S + + EEKE + HSEKLA+ F L+ T+P T + + KNL
Sbjct: 521 VIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNL 580
Query: 733 RVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
R+C DCH+A K +SK+ +R I++RD NRFH FK G CSC DYW
Sbjct: 581 RICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 183/423 (43%), Gaps = 45/423 (10%)
Query: 119 GMLLHAHAIVDGF--GSNLFVCSSLVDLYFKFSRVGLARKVFDEMP--ERDTVAWNTVIT 174
G LHA G ++ ++L Y + A+K+FDE+P E+D V W T+++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 175 GLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHR 234
R +S+++F +M V++D +VV + A+L++LG +A K G
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 235 DAYVLTGLVSLYSKCGDIST-------------------------------ARLLFGMIG 263
V L+ +Y KCG +S R +F +
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 264 KPDLIAYNAMISGYTCNGEIESSVKLFRELLVS-GQRVSSSTMVGLIPVSSPFGHLHLTC 322
+ + +A+ M++GY G ++L E++ G ++ T+ ++ + G+L +
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 323 SIQGYCVK-------SGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
+ Y +K + + V TAL +Y++ ID + +F ++ V WNA+
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF 324
Query: 376 SGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE 435
SG +G + +F +M+ E P+ +T T LSAC+ G + G ++ LE
Sbjct: 325 SGLAMHGKGRMVIDMFPQMI-REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLE 383
Query: 436 PNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHGYGHEALKLFKE 494
P + ++D+ + G I EA L M N V +++ +HG A ++ +E
Sbjct: 384 PKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRE 443
Query: 495 MLH 497
++
Sbjct: 444 LIQ 446
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/591 (33%), Positives = 331/591 (56%), Gaps = 10/591 (1%)
Query: 96 RTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLV-DLYFKFSRVG-- 152
RT L P + +I S ++ +HA I G NL SS+ DL R+G
Sbjct: 12 RTLLCPKRIKFLQSI--SKLKRHITQIHAFVISTG---NLLNGSSISRDLIASCGRIGEI 66
Query: 153 -LARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAV 211
ARKVFDE+P+R +N++I R D+ ++++ M+A +Q DS+T + A
Sbjct: 67 SYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKAC 126
Query: 212 AELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYN 271
L G + C A FG+ D +V + +++LY KCG + A +LFG + K D+I +
Sbjct: 127 LSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWT 186
Query: 272 AMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKS 331
M++G+ G+ +V+ +RE+ G M+GL+ S G + S+ GY ++
Sbjct: 187 TMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT 246
Query: 332 GAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLF 391
G N V T+L +Y+++ I++A ++F KT +W ++ISG+ QNGL A
Sbjct: 247 GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAV 306
Query: 392 QEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKC 451
EM + F P+ VT+ L AC+Q+GSL G+ VH I +++ + +TAL+DMY+KC
Sbjct: 307 VEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKC 365
Query: 452 GNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSIL 511
G +S +R++F+ + K+ V WNT+I YG+HG G E + LF +M S I P TF S+L
Sbjct: 366 GALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLL 425
Query: 512 YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPG 571
A SH+GLV +G+ F M+NKY+I+P +H+ C++D+L RAG++E+AL+ I + ++
Sbjct: 426 SALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNA 485
Query: 572 PAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREV 631
+W LL C H+N + +A+ ++ +L+P S+G L+SN ++ + + A +R++
Sbjct: 486 LPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKL 545
Query: 632 AKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREI 682
+ + K PG + IE+NG F+ D SH + +L L ++R++
Sbjct: 546 MRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 231/478 (48%), Gaps = 9/478 (1%)
Query: 8 ITFINKACNLP-HLAQIHAQLILNGYQSDLASITK-LTQKLFDFGATRHARALFFSVRNP 65
I F+ L H+ QIHA +I G + +SI++ L G +AR +F +
Sbjct: 20 IKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQR 79
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLL 122
+ ++N ++ +S +P + LY + + + PD+ T+ TI A + G +
Sbjct: 80 GVSVYNSMIVVYSRGKNPDEVLRLYDQM-IAEKIQPDSSTFTMTIKACLSGLVLEKGEAV 138
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
A+ G+ +++FVCSS+++LY K ++ A +F +M +RD + W T++TG +
Sbjct: 139 WCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKS 198
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
+++ +R+M G D ++ +L A +L + +G + ++ G + V T L
Sbjct: 199 LKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSL 258
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
V +Y+K G I A +F + +++ ++ISG+ NG + + E+ G +
Sbjct: 259 VDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDL 318
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
T+VG++ S G L + Y +K + + +TAL +YS+ + +R++F+
Sbjct: 319 VTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEH 377
Query: 363 SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG 422
K + WN MIS Y +G + +SLF +M + P+ T + LSA + G + G
Sbjct: 378 VGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQG 437
Query: 423 K-WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV-TWNTIIFG 478
+ W +I ++P+ LID+ A+ G + EA + +S N + W ++ G
Sbjct: 438 QHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/605 (34%), Positives = 342/605 (56%), Gaps = 15/605 (2%)
Query: 55 ARALFFSVRNPDI--FLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA 112
AR +F + +P I ++++++ ++ N ++ LY + L + + P YTY F + A
Sbjct: 54 ARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKM-LNSGVRPTKYTYPFVLKA 112
Query: 113 SP-----DDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTV 167
DD G L+H+H F ++++VC++LVD Y K + +A KVFDEMP+RD V
Sbjct: 113 CAGLRAIDD--GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMV 170
Query: 168 AWNTVITGLVRNCYYDDSIQVFRDMVA-NGVQVDSTTVVTVLPAVAELQELGVGMGIQCL 226
AWN +I+G +C D I +F DM +G+ + +T+V + PA+ L G +
Sbjct: 171 AWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGY 230
Query: 227 AFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESS 286
+ GF D V TG++ +Y+K I AR +F + K + + ++AMI GY N I+ +
Sbjct: 231 CTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEA 290
Query: 287 VKLFRELLVSGQ-RVSSSTMVGLIPVS-SPFGHLHLTCSIQGYCVKSGAISNSSVSTALT 344
++F ++LV+ + + +GLI + + FG L + Y VK+G I + +V +
Sbjct: 291 GEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTII 350
Query: 345 TIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
+ Y++ + A + F E K V ++N++I+G N E + LF EM T+ P+
Sbjct: 351 SFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDIT 410
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
T+ L+AC+ L +L G H N + AL+DMY KCG + A+++FD+M
Sbjct: 411 TLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM 470
Query: 465 SEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGE 524
+++ V+WNT++FG+G+HG G EAL LF M +G++P VT L+IL ACSH+GLV EG+
Sbjct: 471 HKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGK 530
Query: 525 EIFHDMVN-KYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACK 583
++F+ M + + P +H+ CM D+L RAG L++A +F+ MP EP V GTLL AC
Sbjct: 531 QLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACW 590
Query: 584 IHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGC 643
+KN ++ S+++ L + VLLSN YS + AA IR + KKR L KTPG
Sbjct: 591 TYKNAELGNEVSKKMQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGY 649
Query: 644 TLIEI 648
+ +++
Sbjct: 650 SWVDV 654
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/657 (32%), Positives = 363/657 (55%), Gaps = 17/657 (2%)
Query: 56 RALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALY-THLRLRTNLAPDNYTYAF-TIAAS 113
R +F ++R ++ +N L+ + + + + +R+ +P ++ F ++ S
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 114 PDDK-----YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVA 168
K YG++L + D + +LFV SS + +Y + + +R+VFD ER+
Sbjct: 228 RSIKKANVFYGLMLK---LGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 169 WNTVITGLVRNCYYDDSIQVFRDMVANGVQV-DSTTVVTVLPAVAELQELGVGMGIQCLA 227
WNT+I V+N +SI++F + + + V D T + AV+ LQ++ +G
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 228 FKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSV 287
K ++ L+ +YS+CG + + +F + + D++++N MIS + NG + +
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY 347
L E+ G ++ T+ L+ +S + + + ++ G I +++ L +Y
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMY 463
Query: 348 SRLNEIDMARKLFDES--PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
S+ I +++KLF+ S E+ A WN+MISGYTQNG TE +F++M+ PN VT
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 406 ITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
+ + L AC+Q+GS+ GK +H + L+ N++V++AL+DMY+K G I A +F
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 466 EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEE 525
E+N+VT+ T+I GYG HG G A+ LF M SGI P +TF+++L ACS++GL+ EG +
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLK 643
Query: 526 IFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA-VWGTLLGACKI 584
IF +M Y I+P +EH+ C+ D+LGR G++ +A EF++ + E A +WG+LLG+CK+
Sbjct: 644 IFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKL 703
Query: 585 HKNTDIARVASERLFELDPGS--VGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPG 642
H ++A SERL + D G GY VLLSN+Y+ + + +R +++ L K G
Sbjct: 704 HGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVG 763
Query: 643 CTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEE 699
+ IEI G + FVS D+ H H++ IY +++ L MR + T T +E +E
Sbjct: 764 RSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 213 bits (543), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 157/543 (28%), Positives = 270/543 (49%), Gaps = 29/543 (5%)
Query: 38 SITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRT 97
SI K+ G + AR LF ++ P L+N ++ GF N P ++ Y+ ++
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK--- 97
Query: 98 NLAP----DNYTYAFTIAASPDDK---YGMLLHAHAIVDGFGSNLFVCSSLVDLY----- 145
AP D YTY+ T+ A + K G +H H I S+ V +SL+++Y
Sbjct: 98 KTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN 157
Query: 146 ----FKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDS 201
F++ V RKVFD M ++ VAWNT+I+ V+ ++ + F M+ V+
Sbjct: 158 APDCFEYDVV---RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSP 214
Query: 202 TTVVTVLPAVAELQELGVGMGIQCLAFKFG--FHRDAYVLTGLVSLYSKCGDISTARLLF 259
+ V V PAV+ + + L K G + +D +V++ +S+Y++ GDI ++R +F
Sbjct: 215 VSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVF 274
Query: 260 GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS-SPFGHL 318
+ ++ +N MI Y N + S++LF E + S + VS L + S +
Sbjct: 275 DSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQV 334
Query: 319 HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGY 378
L G+ K+ + +L +YSR + + +F E+ V +WN MIS +
Sbjct: 335 ELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAF 394
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
QNGL + L L EM F + +T+T LSA + L + GK H + + ++
Sbjct: 395 VQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE- 453
Query: 439 YVSTALIDMYAKCGNISEARQLFD--SMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML 496
+++ LIDMY+K G I +++LF+ +E++ TWN++I GY +G+ + +F++ML
Sbjct: 454 GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
Query: 497 HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQL 556
I P+ VT SIL ACS G V G+++ + +Y + + A +VD+ +AG +
Sbjct: 514 EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASA-LVDMYSKAGAI 572
Query: 557 EKA 559
+ A
Sbjct: 573 KYA 575
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 15/344 (4%)
Query: 250 GDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG--QRVSSSTMVG 307
G+ AR LF I KP + +N +I G+ CN ++ + + + + T
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 308 LIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY-SRLN-----EIDMARKLFD 361
+ + +L ++ + ++ S+ V +L +Y S LN E D+ RK+FD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
K V AWN +IS Y + G A F MM E P+PV+ A + S+
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 422 GKWVHQLIKSKNLE--PNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGY 479
+ L+ E +++V ++ I MYA+ G+I +R++FDS E+N WNT+I Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 480 GLHGYGHEALKLFKEMLHSG-IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK-YRIE 537
+ E+++LF E + S I VT+L A S V G + FH V+K +R
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ-FHGFVSKNFREL 351
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
P+ ++ MV + R G + K+ +M E W T++ A
Sbjct: 352 PIVIVNSLMV-MYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISA 393
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/564 (36%), Positives = 312/564 (55%), Gaps = 34/564 (6%)
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEI---ESSVKLFREL 293
++ ++ L S D++ A +F I +N +I C ++ E + L+R++
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRA--CAHDVSRKEEAFMLYRKM 141
Query: 294 LVSGQRVSSSTMVGLI--PVSSPFGHLHLTCSIQGYC--VKSGAISNSSVSTALTTIYSR 349
L G+ + + FG + Q +C VK G + V+ L +Y
Sbjct: 142 LERGESSPDKHTFPFVLKACAYIFG---FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGS 198
Query: 350 LNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTT 409
+D+ARK+FDE PE+++ +WN+MI + G ++AL LF+EM + F P+ T+ +
Sbjct: 199 CGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSV 257
Query: 410 LSACAQLGSLSFGKWVHQLIKSK---NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE 466
LSACA LGSLS G W H + K ++ ++ V +LI+MY KCG++ A Q+F M +
Sbjct: 258 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 317
Query: 467 KNTVTWNTIIFGYGLHGYGHEALKLFKEML--HSGIHPSGVTFLSILYACSHAGLVREGE 524
++ +WN +I G+ HG EA+ F M+ + P+ VTF+ +L AC+H G V +G
Sbjct: 318 RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 377
Query: 525 EIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGAC-- 582
+ F MV Y IEP EH+ C+VD++ RAG + +A++ + +MP++P +W +LL AC
Sbjct: 378 QYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
Query: 583 ---KIHKNTDIAR--VASERLFELDPGSV-GYYVLLSNIYSVGRNFPKAASIREVAKKRK 636
+ + +IAR + ++ E G+ G YVLLS +Y+ + +R++ +
Sbjct: 438 KGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHG 497
Query: 637 LAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGY-----QTETVTS 691
+ K PGC+ IEING +H F +GD SH IY L+ + ++R IGY Q V +
Sbjct: 498 IRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDA 557
Query: 692 LHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITER 751
+D KE + +HSE+LAIAF LI P T IRI KNLRVC DCH TK ISK+
Sbjct: 558 TND---GSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNT 614
Query: 752 VIVVRDANRFHHFKDGICSCGDYW 775
I+VRD RFHHFKDG CSC DYW
Sbjct: 615 EIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 146 bits (368), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 165/341 (48%), Gaps = 18/341 (5%)
Query: 7 IITFINKACNLPHLAQIHAQLILNGYQSDLASI---TKLTQKLFDFGATRHARALFFSVR 63
I + ++ L Q+HA + Y + A++ K+ Q F +A +F S+
Sbjct: 51 IFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 64 NPDIFLFNVLVKGFSVNAS-PSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYG 119
N F++N L++ + + S + LY + R +PD +T+ F + A G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 120 MLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRN 179
+H + GFG +++V + L+ LY + LARKVFDEMPER V+WN++I LVR
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 180 CYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFK---FGFHRDA 236
YD ++Q+FR+M + D T+ +VL A A L L +G + D
Sbjct: 231 GEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDV 289
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
V L+ +Y KCG + A +F + K DL ++NAMI G+ +G E ++ F ++
Sbjct: 290 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349
Query: 297 GQ--RVSSSTMVGLIPVSSPFGHL-----HLTCSIQGYCVK 330
+ R +S T VGL+ + G + + ++ YC++
Sbjct: 350 RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIE 390
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/697 (30%), Positives = 354/697 (50%), Gaps = 43/697 (6%)
Query: 55 ARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP 114
A LF S + +N L+ G+ + S + L+ ++ + P+ YT +
Sbjct: 78 AEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ-SDGIKPNEYTLGSVLRMCT 136
Query: 115 DDKY---GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP-ERDTVAWN 170
G +H H I GF ++ V + L+ +Y + R+ A +F+ M E++ V W
Sbjct: 137 SLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWT 196
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
+++TG +N + +I+ FRD+ G Q + T +VL A A + VG+ + C K
Sbjct: 197 SMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
GF + YV + L+ +Y+KC ++ +AR L + D++++N+MI G G I ++ +F
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMF 316
Query: 291 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYC--VKSGAISNSSVSTALTTIYS 348
+ ++ T+ ++ + + + +C VK+G + V+ AL +Y+
Sbjct: 317 GRMHERDMKIDDFTIPSILNCFA-LSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYA 375
Query: 349 RLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITT 408
+ +D A K+F+ EK V +W A+++G T NG + AL LF M TP+ + +
Sbjct: 376 KRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTAS 435
Query: 409 TLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKN 468
LSA A+L L FG+ VH ++ V+ +L+ MY KCG++ +A +F+SM ++
Sbjct: 436 VLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRD 495
Query: 469 TVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
+TW +I GY + GL+ + + F
Sbjct: 496 LITWTCLIVGY-----------------------------------AKNGLLEDAQRYFD 520
Query: 529 DMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNT 588
M Y I P EH+ACM+D+ GR+G K + + M VEP VW +L A + H N
Sbjct: 521 SMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNI 580
Query: 589 DIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEI 648
+ A++ L EL+P + YV LSN+YS +AA++R + K R ++K PGC+ +E
Sbjct: 581 ENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEE 640
Query: 649 NGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHS 708
G H F+S DR H IY+ ++++ ++E GY + +LHD+++E KEL + HS
Sbjct: 641 KGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHS 700
Query: 709 EKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFI 745
EKLA+AF L+ G IRIIKNLRVC DCH+A K +
Sbjct: 701 EKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 160/348 (45%), Gaps = 2/348 (0%)
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
RD + ++ YS +S A LF + I++NA+ISGY +G + LF E
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
+ G + + T+ ++ + + L I G+ +K+G + +V L +Y++
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 353 IDMARKLFDE-SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
I A LF+ EK W +M++GY+QNG A+ F+++ N T + L+
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 412 ACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVT 471
ACA + + G VH I + NIYV +ALIDMYAKC + AR L + M + V+
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS 295
Query: 472 WNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMV 531
WN++I G G EAL +F M + T SIL + + + H ++
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI 355
Query: 532 NKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
K + +VD+ + G ++ AL+ M +E W L+
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 187/422 (44%), Gaps = 43/422 (10%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q+H ++ +G+++++ + L ARAL + D+ +N ++ G
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLL--HAHAIV--DGFGSNLFV 137
+++++ + R ++ D++T + + M + AH ++ G+ + V
Sbjct: 308 LIGEALSMFGRMHER-DMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLV 366
Query: 138 CSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGV 197
++LVD+Y K + A KVF+ M E+D ++W ++TG N YD+++++F +M G+
Sbjct: 367 NNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGI 426
Query: 198 QVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARL 257
D +VL A AEL L G + K GF V LV++Y+KCG + A +
Sbjct: 427 TPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANV 486
Query: 258 LFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGH 317
+F + DLI + +I GY NG +E + + F S T+ G+ P G
Sbjct: 487 IFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFD---------SMRTVYGITP-----GP 532
Query: 318 LHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISG 377
H C I + S + L+++++ P+ TV W A+++
Sbjct: 533 EHYACMIDLF----------GRSGDFVKVEQLLHQMEV-------EPDATV--WKAILAA 573
Query: 378 YTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSAC-AQLGSLSFGKWVHQLIKSKNL-- 434
++G E + +M E PN LS + G V +L+KS+N+
Sbjct: 574 SRKHGNIENGERAAKTLM--ELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISK 631
Query: 435 EP 436
EP
Sbjct: 632 EP 633
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 408 TTLSACAQLGSLSFGKWVHQLIK--SKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
T L + LG LS V + + K E + + +I Y+ +S+A +LF S
Sbjct: 27 TKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNP 86
Query: 466 EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEE 525
KNT++WN +I GY G EA LF EM GI P+ T S+L C+ L+ GE+
Sbjct: 87 VKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQ 146
Query: 526 IFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
I H K + ++ + + ++ +A TM E W ++L
Sbjct: 147 I-HGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSML 199
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 232/755 (30%), Positives = 365/755 (48%), Gaps = 65/755 (8%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
IH+ +I G S L + G A F +R D+ +N ++ + N
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLV 142
++ L + + ++P T+ I G + L C + +
Sbjct: 263 HEEAVELVKEME-KEGISPGLVTWNILI-------------------GGYNQLGKCDAAM 302
Query: 143 DLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDST 202
DL K G+ VF W +I+GL+ N ++ +FR M GV ++
Sbjct: 303 DLMQKMETFGITADVF---------TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 203 TVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMI 262
T+++ + A + L+ + G + +A K GF D V LV +YSKCG + AR +F +
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 263 GKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC 322
D+ +N+MI+GY G + +LF + + R + T +I
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI------------- 460
Query: 323 SIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNG 382
SG I N A+ ++ R+ + D ++ A WN +I+GY QNG
Sbjct: 461 --------SGYIKNGDEGEAMD-LFQRMEK--------DGKVQRNTATWNLIIAGYIQNG 503
Query: 383 LTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVST 442
+ AL LF++M + F PN VTI + L ACA L + +H + +NL+ V
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 443 ALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHP 502
AL D YAK G+I +R +F M K+ +TWN++I GY LHG AL LF +M GI P
Sbjct: 564 ALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITP 623
Query: 503 SGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEF 562
+ T SI+ A G V EG+++F+ + N Y I P EH + MV + GRA +LE+AL+F
Sbjct: 624 NRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQF 683
Query: 563 IRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNF 622
I+ M ++ +W + L C+IH + D+A A+E LF L+P + ++S IY++G
Sbjct: 684 IQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKL 743
Query: 623 PKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREI 682
++ + + L K G + IE+ H F +GD+S +Y ++E KM +
Sbjct: 744 GRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVE----KMSRL 799
Query: 683 GYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPG--TEIRIIKNLRVCLDCHT 740
+++ +EEE +E +HSEK A+AF LI++ T IRI+KNLR+C DCH
Sbjct: 800 DNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHD 859
Query: 741 ATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
K++SK I++ D HHFK+G CSC DYW
Sbjct: 860 TAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 221/475 (46%), Gaps = 51/475 (10%)
Query: 119 GMLLHAHAIVDGFG----SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVIT 174
G +LHA FG ++FV + L+ +Y K + ARKVFD M ER+ W+ +I
Sbjct: 100 GRILHAR-----FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIG 154
Query: 175 GLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHR 234
R + + ++FR M+ +GV D +L A ++ G I + K G
Sbjct: 155 AYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSS 214
Query: 235 DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
V ++++Y+KCG++ A F + + D+IA+N+++ Y NG+ E +V+L +E+
Sbjct: 215 CLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME 274
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
G GL+ + G Y++L + D
Sbjct: 275 KEG------ISPGLVTWNILIGG-----------------------------YNQLGKCD 299
Query: 355 MARKLFDESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
A L + + A W AMISG NG+ AL +F++M PN VTI + +
Sbjct: 300 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
SAC+ L ++ G VH + ++ V +L+DMY+KCG + +AR++FDS+ K+
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY 419
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
TWN++I GY GY +A +LF M + + P+ +T+ +++ G E ++F M
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 531 VNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVE---PGPAVWGTLLGAC 582
+++ ++ + G+ ++ALE R M P +LL AC
Sbjct: 480 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 151/579 (26%), Positives = 257/579 (44%), Gaps = 85/579 (14%)
Query: 19 HLAQI-HAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGF 77
HL +I HA+ L + D+ TKL G AR +F S+R ++F ++ ++ +
Sbjct: 98 HLGRILHARFGL-FTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAY 156
Query: 78 SVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDDKYGMLLHAHAIVDGFGSN 134
S + +A L ++ + PD++ + + A D + G ++H+ I G S
Sbjct: 157 S-RENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC 215
Query: 135 LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
L V +S++ +Y K + A K F M ERD +AWN+V+ +N +++++++ ++M
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 195 NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
G+ S +VT + +LG +C DA + D+
Sbjct: 276 EGI---SPGLVTWNILIGGYNQLG-----KC---------DAAM------------DLMQ 306
Query: 255 ARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
FG+ D+ + AMISG NG ++ +FR++ ++G ++ T++ + S
Sbjct: 307 KMETFGITA--DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAM 374
++ + VK G I + V +L +YS+ +++ ARK+FD K V WN+M
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSM 424
Query: 375 ISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNL 434
I+GY Q G A LF M PN +T T +S
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG---------------------- 462
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLFDSMS-----EKNTVTWNTIIFGYGLHGYGHEAL 489
Y K G+ EA LF M ++NT TWN II GY +G EAL
Sbjct: 463 -------------YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 490 KLFKEMLHSGIHPSGVTFLSILYACSH---AGLVREGEEIFHDMVNKYRIEPLAEHHACM 546
+LF++M S P+ VT LS+L AC++ A +VRE H V + ++ + +
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE----IHGCVLRRNLDAIHAVKNAL 565
Query: 547 VDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH 585
D ++G +E + M + W +L+G +H
Sbjct: 566 TDTYAKSGDIEYSRTIFLGMETKD-IITWNSLIGGYVLH 603
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 7/293 (2%)
Query: 277 YTC-NGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAIS 335
Y C NG + + K L G +V ST + L+ G +HL + + G +
Sbjct: 55 YLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFT 111
Query: 336 NSSV--STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQE 393
V T L ++Y++ I ARK+FD E+ + W+AMI Y++ LF+
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 394 MMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGN 453
MM P+ L CA G + GK +H ++ + + VS +++ +YAKCG
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 454 ISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYA 513
+ A + F M E++ + WN+++ Y +G EA++L KEM GI P VT+ ++
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 514 CSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
+ G ++ M + I M+ L G +AL+ R M
Sbjct: 292 YNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 8/238 (3%)
Query: 385 ETAL-SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTA 443
E AL SLFQ+ + + T L +C GS+ G+ +H EP+++V T
Sbjct: 66 EKALDSLFQQGSKVKRS----TYLKLLESCIDSGSIHLGRILHARF-GLFTEPDVFVETK 120
Query: 444 LIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPS 503
L+ MYAKCG I++AR++FDSM E+N TW+ +I Y E KLF+ M+ G+ P
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 504 GVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFI 563
F IL C++ G V G+ + H +V K + ++ + + G+L+ A +F
Sbjct: 181 DFLFPKILQGCANCGDVEAGK-VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFF 239
Query: 564 RTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFE-LDPGSVGYYVLLSNIYSVGR 620
R M A LL C+ K+ + + E E + PG V + +L+ +G+
Sbjct: 240 RRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/566 (35%), Positives = 319/566 (56%), Gaps = 13/566 (2%)
Query: 223 IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
+ L K GF D + + LV Y K +I+TAR LF + +P+++++ ++ISGY G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 283 IESSVKLFRELLVSGQRVSSS-TMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVST 341
++++ +F+++ + T + S + +I SG N VS+
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 342 ALTTIYSRLNEIDMARKLFDE--SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMT--T 397
+L +Y + N+++ AR++FD + V +W +MI+ Y QN A+ LF+ T
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 398 EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
N + + +SAC+ LG L +GK H L+ E N V+T+L+DMYAKCG++S A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 458 RQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHA 517
++F + + +++ ++I HG G A+KLF EM+ I+P+ VT L +L+ACSH+
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 518 GLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPV--EPGPAVW 575
GLV EG E M KY + P + H+ C+VD+LGR G++++A E +T+ V E G +W
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 576 GTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKR 635
G LL A ++H +I AS+RL + + Y+ LSN Y+V + + S+R K+
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
Query: 636 KLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLH-- 693
K C+ IE + +VF +GD S + I L+ L +M+E G++ +
Sbjct: 471 GNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSS 530
Query: 694 ----DVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKIT 749
DV+EE K+ MV++H E+LA+A+ L+ G+ IRI+ NLR+C DCH A K IS+I
Sbjct: 531 SVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIV 590
Query: 750 ERVIVVRDANRFHHFKDGICSCGDYW 775
ER IVVRD NRFH FK+G C+C DYW
Sbjct: 591 EREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 177/378 (46%), Gaps = 19/378 (5%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
+H + G+ SD ++ L AR LF + P++ + ++ G++
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYGMLLHAHAIVDGFGSNLFVCS 139
P ++++++ + + P+ YT+A A + + G +HA + G N+ V S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 140 SLVDLYFKFSRVGLARKVFDEMPE--RDTVAWNTVITGLVRNCYYDDSIQVFRDMVA--N 195
SLVD+Y K + V AR+VFD M R+ V+W ++IT +N ++I++FR A
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 196 GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA 255
+ + + +V+ A + L L G L + G+ + V T L+ +Y+KCG +S A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 256 RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
+F I +I+Y +MI +G E++VKLF E++ + T++G++ S
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 316 GHL-----HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKL---FDESPEKT 367
G + +L+ + Y G + +S T + + R +D A +L + E+
Sbjct: 351 GLVNEGLEYLSLMAEKY----GVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQG 406
Query: 368 VAAWNAMISGYTQNGLTE 385
W A++S +G E
Sbjct: 407 ALLWGALLSAGRLHGRVE 424
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 9/197 (4%)
Query: 374 MISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN 433
M G+ QN A SLF +F + T + ++ + +F +H L
Sbjct: 1 MKKGFIQNVHLAPATSLFVPQYKNDFF-HLKTKAFLVHKLSESTNAAFTNLLHTLTLKLG 59
Query: 434 LEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFK 493
+ + L+ Y K I+ AR+LFD M E N V+W ++I GY G AL +F+
Sbjct: 60 FASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQ 119
Query: 494 EMLHSG-IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEH---HACMVDI 549
+M + P+ TF S+ ACS R G+ I + I L + + +VD+
Sbjct: 120 KMHEDRPVPPNEYTFASVFKACSALAESRIGKNIH----ARLEISGLRRNIVVSSSLVDM 175
Query: 550 LGRAGQLEKALEFIRTM 566
G+ +E A +M
Sbjct: 176 YGKCNDVETARRVFDSM 192
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 307/542 (56%), Gaps = 27/542 (4%)
Query: 250 GDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLI 309
GD+S A +F I KP +NA+I G+ + + +R +L S+ V +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 310 PVS------------SPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMAR 357
S S LH C I + G ++S + T L YS+ ++ A
Sbjct: 111 TCSFTLKACARALCSSAMDQLH--CQIN----RRGLSADSLLCTTLLDAYSKNGDLISAY 164
Query: 358 KLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
KLFDE P + VA+WNA+I+G A+ L++ M T + VT+ L AC+ LG
Sbjct: 165 KLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLG 224
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTII 476
+ G+ + + N+ VS A IDMY+KCG + +A Q+F+ + +K+ VTWNT+I
Sbjct: 225 DVKEGENIFHGYSN----DNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
G+ +HG H AL++F ++ +GI P V++L+ L AC HAGLV G +F++M K +
Sbjct: 281 TGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GV 339
Query: 537 EPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASE 596
E +H+ C+VD+L RAG+L +A + I +M + P P +W +LLGA +I+ + ++A +AS
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASR 399
Query: 597 RLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFV 656
+ E+ + G +VLLSN+Y+ + +R+ + +++ K PG + IE GT H F
Sbjct: 400 EIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFY 459
Query: 657 SGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFA 716
+ D+SH IY ++++ K+RE GY +T LHD+ EEEKE + HSEKLA+A+
Sbjct: 460 NSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYG 519
Query: 717 LITTEPGTE---IRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGD 773
L+ + E +R+I NLR+C DCH K ISKI +R I+VRD RFH FKDG CSC D
Sbjct: 520 LMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRD 579
Query: 774 YW 775
+W
Sbjct: 580 FW 581
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 193/424 (45%), Gaps = 19/424 (4%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVD--LYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRN 179
L +H + G + F+ S L++ F + A ++F +P+ T WN +I G +
Sbjct: 22 LQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGS 81
Query: 180 CYYDDSIQVFRDMVANG------VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH 233
+ + +R M+ +VD+ T L A A + C + G
Sbjct: 82 SHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLS 141
Query: 234 RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL 293
D+ + T L+ YSK GD+ +A LF + D+ ++NA+I+G +++L++ +
Sbjct: 142 ADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRM 201
Query: 294 LVSGQRVSSSTMVGLIPVSSPFGHLHLTCSI-QGYCVKSGAISNSSVSTALTTIYSRLNE 352
G R S T+V + S G + +I GY + N VS A +YS+
Sbjct: 202 ETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGY-----SNDNVIVSNAAIDMYSKCGF 256
Query: 353 IDMARKLFDE-SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
+D A ++F++ + +K+V WN MI+G+ +G AL +F ++ P+ V+ L+
Sbjct: 257 VDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALT 316
Query: 412 ACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE-KNTV 470
AC G + +G V + K +E N+ ++D+ ++ G + EA + SMS + V
Sbjct: 317 ACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPV 376
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSG-VTFLSILYACSHAGLVREGEEIFHD 529
W +++ ++ A +E+ G++ G LS +YA G ++ + D
Sbjct: 377 LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQ--GRWKDVGRVRDD 434
Query: 530 MVNK 533
M +K
Sbjct: 435 MESK 438
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 149/305 (48%), Gaps = 25/305 (8%)
Query: 9 TFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQK--LFDFGATRHARALFFSVRNPD 66
T I K + + Q+ + + G+ ++L ++ + FG A +F + P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 67 IFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAP-----DNYTYAFTIAA-------SP 114
+N +++GF+ ++ PS + + Y + +++ + D T +FT+ A S
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 115 DDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVIT 174
D+ LH G ++ +C++L+D Y K + A K+FDEMP RD +WN +I
Sbjct: 128 MDQ----LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIA 183
Query: 175 GLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHR 234
GLV +++++++ M G++ TVV L A + L ++ G I G+
Sbjct: 184 GLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENI-----FHGYSN 238
Query: 235 DAYVLT-GLVSLYSKCGDISTARLLFGMI-GKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
D +++ + +YSKCG + A +F GK ++ +N MI+G+ +GE ++++F +
Sbjct: 239 DNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDK 298
Query: 293 LLVSG 297
L +G
Sbjct: 299 LEDNG 303
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/682 (32%), Positives = 371/682 (54%), Gaps = 39/682 (5%)
Query: 119 GMLLHAHAIVDGF--GSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
G+ LH H + + N+ + + L+++Y K + AR+VFD MPER+ V+W +ITG
Sbjct: 78 GINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGY 137
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
V+ + +F M+++ + T+ +VL + G + LA K G H
Sbjct: 138 VQAGNEQEGFCLFSSMLSHCFP-NEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSI 192
Query: 237 YVLTGLVSLYSKCGDISTAR---LLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL 293
YV ++S+Y +C D + A +F I +L+ +N+MI+ + C + ++ +F +
Sbjct: 193 YVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM 252
Query: 294 LVSGQRVSSSTMVGLIPVSSPFGHLHLT------CSIQ--GYCVKSGAISNSSVSTALTT 345
G +T++ + SS + L C +Q VKSG ++ + V+TAL
Sbjct: 253 HSDGVGFDRATLLNI--CSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIK 310
Query: 346 IYSRLNE--IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNP 403
+YS + E D + + S + + AWN +I+ + E A+ LF ++ + +P+
Sbjct: 311 VYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDW 369
Query: 404 VTITTTLSACAQLGSLSFGKWVH-QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
T ++ L ACA L + +H Q+IK L + ++ +LI YAKCG++ ++FD
Sbjct: 370 YTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV-LNNSLIHAYAKCGSLDLCMRVFD 428
Query: 463 SMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVRE 522
M ++ V+WN+++ Y LHG L +F++M I+P TF+++L ACSHAG V E
Sbjct: 429 DMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEE 485
Query: 523 GEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGAC 582
G IF M K P H+AC++D+L RA + +A E I+ MP++P VW LLG+C
Sbjct: 486 GLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSC 545
Query: 583 KIHKNTDIARVASERLFEL-DPGSVGYYVLLSNIYSVGRNFPKAA-SIREVAKKRKLAKT 640
+ H NT + ++A+++L EL +P + Y+ +SNIY+ +F +A SI+E+ R + K
Sbjct: 546 RKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWR-VRKE 604
Query: 641 PGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEK 700
P + EI H F SG R A+Y L++L ++E+GY E + S E+E+
Sbjct: 605 PDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPE-MRSASQDIEDEE 663
Query: 701 ELMVNV--HSEKLAIAFALITTEPGTE-----IRIIKNLRVCLDCHTATKFISKITERVI 753
+ N+ HSEKLA+AFA++ ++ I+I+KN R+C+DCH K SK+ + I
Sbjct: 664 QEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEI 723
Query: 754 VVRDANRFHHFKDGICSCGDYW 775
++RD+NRFHHFKD CSC DYW
Sbjct: 724 LMRDSNRFHHFKDSSCSCNDYW 745
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLL 122
DI +N ++ F+V P +I L+ LR + L+PD YT++ + A ++ + +
Sbjct: 334 DIVAWNGIITAFAV-YDPERAIHLFGQLR-QEKLSPDWYTFSSVLKACAGLVTARHALSI 391
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
HA I GF ++ + +SL+ Y K + L +VFD+M RD V+WN+++ +
Sbjct: 392 HAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQV 451
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI 223
D + VF+ M + DS T + +L A + + G+ I
Sbjct: 452 DSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRI 489
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/663 (32%), Positives = 346/663 (52%), Gaps = 5/663 (0%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNP-DIFLFNVLVKGFSVN 80
QIH ++ N +D T L F FG + A +F + + ++ L+NV++ GF +
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250
Query: 81 ASPSSSIALYTHLRLRT-NLAPDNYTYAF-TIAASPDDKYGMLLHAHAIVDGFGSNLFVC 138
SS+ LY + + L ++T A + S + +G +H + G ++ +VC
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC 310
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+SL+ +Y K VG A VF + ++ WN ++ N Y ++ +F M V
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
DS T+ V+ + L G + FK + + + L++LYSKCG A L+
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 259 FGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ--RVSSSTMVGLIPVSSPFG 316
F + + D++A+ ++ISG NG+ + ++K+F ++ + S M + +
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490
Query: 317 HLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMIS 376
L + G +K+G + N V ++L +YS+ +MA K+F + + AWN+MIS
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS 550
Query: 377 GYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
Y++N L E ++ LF M++ P+ V+IT+ L A + SL GK +H +
Sbjct: 551 CYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPS 610
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML 496
+ ++ ALIDMY KCG A +F M K+ +TWN +I+GYG HG AL LF EM
Sbjct: 611 DTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMK 670
Query: 497 HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQL 556
+G P VTFLS++ AC+H+G V EG+ IF M Y IEP EH+A MVD+LGRAG L
Sbjct: 671 KAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLL 730
Query: 557 EKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIY 616
E+A FI+ MP+E ++W LL A + H N ++ +++E+L ++P YV L N+Y
Sbjct: 731 EEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLY 790
Query: 617 SVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLT 676
+AA + + K++ L K PGC+ IE++ T+VF SG S I+ +L +L
Sbjct: 791 MEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLK 850
Query: 677 GKM 679
M
Sbjct: 851 SNM 853
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 229/474 (48%), Gaps = 14/474 (2%)
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPE-------RDTVAWN 170
YG +H +V G+ + F+ +SLV++Y K + A +VFD + RD WN
Sbjct: 78 YGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWN 137
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAF-- 228
++I G + + + + FR M+ GV+ D+ ++ V+ + + G Q F
Sbjct: 138 SMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFML 197
Query: 229 KFGFHRDAYVLTGLVSLYSKCG-DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSV 287
+ D+++ T L+ +Y K G I R+ + K +++ +N MI G+ +G ESS+
Sbjct: 198 RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSL 257
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY 347
L+ + ++ S++ G + S + I VK G ++ V T+L ++Y
Sbjct: 258 DLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317
Query: 348 SRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTIT 407
S+ + A +F +K + WNAM++ Y +N +AL LF M P+ T++
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377
Query: 408 TTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK 467
+S C+ LG ++GK VH + + ++ + +AL+ +Y+KCG +A +F SM EK
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 468 NTVTWNTIIFGYGLHGYGHEALKLFKEML--HSGIHPSGVTFLSILYACSHAGLVREGEE 525
+ V W ++I G +G EALK+F +M + P S+ AC+ +R G +
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 526 IFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
+ M+ + + + ++D+ + G E AL+ +M E A W +++
Sbjct: 498 VHGSMIKTGLVLNVFVGSS-LIDLYSKCGLPEMALKVFTSMSTENMVA-WNSMI 549
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 135/290 (46%), Gaps = 16/290 (5%)
Query: 304 TMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDES 363
T L+ S +L +I G V G + ++T+L +Y + +D A ++FD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 364 PE-------KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
+ + V WN+MI GY + + + F+ M+ P+ +++ +S +
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 417 GSL--SFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWN 473
G+ GK +H + +L+ + ++ TALIDMY K G +A ++F + +K N V WN
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
+I G+G G +L L+ ++ + +F L ACS + G +I D+V
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV-- 299
Query: 534 YRIEPLAEHHAC--MVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
++ + + C ++ + + G + +A E + + V+ +W ++ A
Sbjct: 300 -KMGLHNDPYVCTSLLSMYSKCGMVGEA-ETVFSCVVDKRLEIWNAMVAA 347
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 11/221 (4%)
Query: 369 AAWNAMISGYTQNGLTETALSLFQEM-MTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ 427
A+ N+ I Q G AL L+ + ++ F + T + L AC+ L +LS+GK +H
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 428 LIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE-------KNTVTWNTIIFGYG 480
+ + +++T+L++MY KCG + A Q+FD S+ ++ WN++I GY
Sbjct: 85 SVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 481 LHGYGHEALKLFKEMLHSGIHPSGVTFLSILYA--CSHAGLVREGEEIFHDMVNKYRIEP 538
E + F+ ML G+ P + LSI+ + C RE + H + + ++
Sbjct: 145 KFRRFKEGVGCFRRMLVFGVRPDAFS-LSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT 203
Query: 539 LAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
+ ++D+ + G A + + +W ++
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 345/635 (54%), Gaps = 6/635 (0%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT 109
G+ R AR +F + ++ + ++ G+S N + +I LY + L+ +L PD + +
Sbjct: 116 GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKM-LQEDLVPDQFAFGSI 174
Query: 110 I---AASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT 166
I A+S D G LHA I S+L ++L+ +Y +F+++ A +VF +P +D
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDL 234
Query: 167 VAWNTVITGLVRNCYYDDSIQVFRDMVANGV-QVDSTTVVTVLPAVAELQELGVGMGIQC 225
++W+++I G + + +++ ++M++ GV + + L A + L G I
Sbjct: 235 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHG 294
Query: 226 LAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIES 285
L K +A L +Y++CG +++AR +F I +PD ++N +I+G NG +
Sbjct: 295 LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE 354
Query: 286 SVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTT 345
+V +F ++ SG + ++ L+ + L I Y +K G +++ +V +L T
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLT 414
Query: 346 IYSRLNEIDMARKLFDE-SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
+Y+ +++ LF++ +WN +++ Q+ L LF+ M+ +E P+ +
Sbjct: 415 MYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHI 474
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
T+ L C ++ SL G VH L P ++ LIDMYAKCG++ +AR++FDSM
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 465 SEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGE 524
++ V+W+T+I GY G+G EAL LFKEM +GI P+ VTF+ +L ACSH GLV EG
Sbjct: 535 DNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGL 594
Query: 525 EIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKI 584
+++ M ++ I P EH +C+VD+L RAG+L +A FI M +EP VW TLL ACK
Sbjct: 595 KLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKT 654
Query: 585 HKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCT 644
N +A+ A+E + ++DP + +VLL ++++ N+ AA +R KK + K PG +
Sbjct: 655 QGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Query: 645 LIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKM 679
IEI H+F + D H IY +L + +M
Sbjct: 715 WIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 209/446 (46%), Gaps = 31/446 (6%)
Query: 170 NTVITGLVRNCYYDDSIQVFRDMVANG-VQVDSTTVVTVLPAVAELQELGVGMGIQCLAF 228
N I L ++ +Y ++++ F N ++ T ++++ A + + L G I
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 229 KFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVK 288
D + ++S+Y KCG + AR +F + + +L++Y ++I+GY+ NG+ +++
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 289 LFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCS----------IQGYCVKSGAISNSS 338
L+ ++L L+P FG + C+ + +K + S+
Sbjct: 155 LYLKMLQE----------DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLI 204
Query: 339 VSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMT-T 397
AL +Y R N++ A ++F P K + +W+++I+G++Q G ALS +EM++
Sbjct: 205 AQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 264
Query: 398 EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
F PN ++L AC+ L +G +H L L N +L DMYA+CG ++ A
Sbjct: 265 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSA 324
Query: 458 RQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHA 517
R++FD + +T +WN II G +GY EA+ +F +M SG P ++ S+L A +
Sbjct: 325 RRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKP 384
Query: 518 GLVREGEEIFHDMVNKYRIEPLAEHHAC--MVDILGRAGQLEKALEFIRTMPVEPGPAVW 575
+ +G +I H + K+ LA+ C ++ + L W
Sbjct: 385 MALSQGMQI-HSYIIKWGF--LADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSW 441
Query: 576 GTLLGACKIHKNTDIARVASERLFEL 601
T+L AC H+ V RLF+L
Sbjct: 442 NTILTACLQHEQP----VEMLRLFKL 463
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 360 bits (925), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 229/777 (29%), Positives = 385/777 (49%), Gaps = 43/777 (5%)
Query: 42 LTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAP 101
L G R A +F S+ +P + + L+ GFS ++ ++ +R + P
Sbjct: 120 LISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 102 DNYTYAFTIAAS---PDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGL--ARK 156
+ YT+ + A G+ +H + GF +++FV +SL+ LY K S K
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK 239
Query: 157 VFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDM-VANGVQVDSTTVVTVLPAVAELQ 215
+FDE+P+RD +WNTV++ LV+ + +F +M G VDS T+ T+L + +
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 216 ELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIS---------------------T 254
L G + A + G ++ V L+ YSK D+ T
Sbjct: 300 VLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMIT 359
Query: 255 ARLLFGMIG----------KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSST 304
A + FGM+ + + I YNA+++G+ NG ++KLF ++L G ++ +
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 305 MVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
+ + ++ I G+C+K G N + TAL + +R + A ++FD+ P
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Query: 365 EK--TVAAWNAMISGYTQNGLTETALSLFQEMMTTE-FTPNPVTITTTLSACAQLGSLSF 421
+ A ++I GY +NGL + A+SLF + + + V++T L+ C LG
Sbjct: 480 SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREM 539
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
G +H +I + +LI MYAKC + +A ++F++M E + ++WN++I Y L
Sbjct: 540 GYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYIL 599
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSH--AGLVREGEEIFHDMVNKYRIEPL 539
G EAL L+ M I P +T ++ A + + + ++F M Y IEP
Sbjct: 600 QRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPT 659
Query: 540 AEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLF 599
EH+ V +LG G LE+A + I +MPV+P +V LL +C+IH NT +A+ ++ +
Sbjct: 660 TEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLIL 719
Query: 600 ELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGD 659
P + Y+L SNIYS + ++ IRE ++R K P + I H F + D
Sbjct: 720 STKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARD 779
Query: 660 RSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALIT 719
SH IY LE L + ++GY+ T L +V+E K+ + HS KLA+ + +++
Sbjct: 780 TSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILS 839
Query: 720 TEP-GTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+ G +R++KN+ +C DCH K+IS + +R IV+RD++ FHHF +G CSC D W
Sbjct: 840 SNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 132/592 (22%), Positives = 240/592 (40%), Gaps = 61/592 (10%)
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG-V 197
++L+ Y K A VF + V++ +I+G R ++++VF M G V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 198 QVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSK-----CGDI 252
Q + T V +L A + +G+ I L K GF +V L+SLY K C D+
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 253 STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL-LVSGQRVSSSTMVGLIPV 311
LF I + D+ ++N ++S G+ + LF E+ V G V S T+ L+
Sbjct: 238 LK---LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 312 SSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE------------------- 352
+ L + G ++ G + SV+ AL YS+ +
Sbjct: 295 CTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTF 354
Query: 353 ------------IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFT 400
+D A ++F EK +NA+++G+ +NG AL LF +M+
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 401 PNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQL 460
++T+ + AC + + +H N + TAL+DM +C +++A ++
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 461 FDSMSEK--NTVTWNTIIFGYGLHGYGHEALKLFKEML-HSGIHPSGVTFLSILYACSHA 517
FD ++ +II GY +G +A+ LF L + V+ IL C
Sbjct: 475 FDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTL 534
Query: 518 GLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGT 577
G G +I + ++ ++ ++ + + + A++ TM E W +
Sbjct: 535 GFREMGYQIHCYALKAGYFSDISLGNS-LISMYAKCCDSDDAIKIFNTMR-EHDVISWNS 592
Query: 578 LLGACKIHKNTDIARVASERL--FELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKR 635
L+ + +N D A R+ E+ P + +++S N K +S R++
Sbjct: 593 LISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESN--KLSSCRDLFLSM 650
Query: 636 KLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTE 687
K T+ +I TT + + R H + +LE+ + + Q E
Sbjct: 651 K-------TIYDIEPTTEHYTAFVRVLGH----WGLLEEAEDTINSMPVQPE 691
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 193/470 (41%), Gaps = 45/470 (9%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
N++I F +K ++ + ++ ++ D + T++ FG A +F +V
Sbjct: 324 NALIGFYSKFWDMKKVESLYEMMM----AQDAVTFTEMITAYMSFGMVDSAVEIFANVTE 379
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYGML 121
+ +N L+ GF N ++ L+T + L+ + +++ + A + K
Sbjct: 380 KNTITYNALMAGFCRNGHGLKALKLFTDM-LQRGVELTDFSLTSAVDACGLVSEKKVSEQ 438
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER--DTVAWNTVITGLVRN 179
+H I G N + ++L+D+ + R+ A ++FD+ P + A ++I G RN
Sbjct: 439 IHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARN 498
Query: 180 CYYDDSIQVF-RDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
D ++ +F R + + +D ++ +L L +G I C A K G+ D +
Sbjct: 499 GLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISL 558
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
L+S+Y+KC D A +F + + D+I++N++IS Y + ++ L+ + +
Sbjct: 559 GNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRM---NE 615
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+ ++ L V S F Y + S + ++ TIY
Sbjct: 616 KEIKPDIITLTLVISAF----------RYTESNKLSSCRDLFLSMKTIY----------- 654
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
E T + A + GL E A M P + L +C +
Sbjct: 655 ----DIEPTTEHYTAFVRVLGHWGLLEEAEDTINSM---PVQPEVSVLRALLDSCRIHSN 707
Query: 419 LSFGKWVHQLIKSKNLE-PNIYVSTALIDMYAKCGNISEARQLFDSMSEK 467
S K V +LI S E P+ Y+ + ++Y+ G + + + M E+
Sbjct: 708 TSVAKRVAKLILSTKPETPSEYILKS--NIYSASGFWHRSEMIREEMRER 755
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 213/675 (31%), Positives = 358/675 (53%), Gaps = 25/675 (3%)
Query: 13 KAC--NLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLF 70
KAC +L QIH +G+ S + + G +A +F ++ +PD+ +
Sbjct: 86 KACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSW 145
Query: 71 NVLVKGFSVNASPSSSIALYTHLRLRT-NLAPDNYTYAFTIA---ASPDDKYGMLLHAHA 126
N ++ GF N IAL +R+++ + D +TY+ ++ S G+ L +
Sbjct: 146 NTILSGFDDN-----QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYD-DS 185
+ G S+L V +S + +Y + AR+VFDEM +D ++WN++++GL + + ++
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
+ +FRDM+ GV++D + +V+ +L + I L K G+ V L+S
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM 305
YSKCG + + +F + + +++++ MIS + +V +F + G + T
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTF 375
Query: 306 VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPE 365
VGLI + I G C+K+G +S SV + T+Y++ ++ A+K F++
Sbjct: 376 VGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITF 435
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF--GK 423
+ + +WNAMISG+ QNG + AL +F E PN T + L+A A +S G+
Sbjct: 436 REIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQ 494
Query: 424 WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHG 483
H + L VS+AL+DMYAK GNI E+ ++F+ MS+KN W +II Y HG
Sbjct: 495 RCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHG 554
Query: 484 YGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHH 543
+ LF +M+ + P VTFLS+L AC+ G+V +G EIF+ M+ Y +EP EH+
Sbjct: 555 DFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHY 614
Query: 544 ACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDP 603
+CMVD+LGRAG+L++A E + +P PG ++ ++LG+C++H N + +E E+ P
Sbjct: 615 SCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKP 674
Query: 604 GSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEING-----TTHVFVSG 658
G YV + NIY+ + KAA IR+ +K+ ++K G + I++ T F SG
Sbjct: 675 ELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSG 734
Query: 659 DRSHSHATAIYAMLE 673
D+SH + IY M+E
Sbjct: 735 DKSHPKSDEIYRMVE 749
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 147/294 (50%), Gaps = 12/294 (4%)
Query: 6 SIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNP 65
S+IT +L QIH I GY+S L L + G +++F +
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGMLL 122
++ + + ++++ +++++ ++R + P+ T+ I A + K G+ +
Sbjct: 341 NVVSWTTM-----ISSNKDDAVSIFLNMRF-DGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
H I GF S V +S + LY KF + A+K F+++ R+ ++WN +I+G +N +
Sbjct: 395 HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFS 454
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLA--FKFGFHRDAYVLT 240
+++++F A + + T +VL A+A +++ V G +C A K G + V +
Sbjct: 455 HEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSS 513
Query: 241 GLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
L+ +Y+K G+I + +F + + + + ++IS Y+ +G+ E+ + LF +++
Sbjct: 514 ALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMI 567
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 355 MARKLFDESPEKTVA-AWNAMISGYTQNGLTETALSLFQEMMTTEFTP---NPVTITTTL 410
+A KLFD S ++ + N IS + ALS+F+E + + + VT+ L
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
AC G L G +H + + VS A++ MY K G A +F+++ + + V
Sbjct: 86 KACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYAC 514
+WNTI+ G+ + AL M +G+ T+ + L C
Sbjct: 144 SWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFC 184
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 357 bits (917), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 229/693 (33%), Positives = 360/693 (51%), Gaps = 13/693 (1%)
Query: 16 NLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVK 75
NL +H Q+I G + + L G A ++F ++ D+ +N L+
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 76 GFSVNASPSSS---IALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGML-LHAHAIV--- 128
G+S N SSS + L+ +R + ++ P+ YT A A + + AHA+V
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQ-DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 129 DGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQV 188
FG +++V +SLV +Y K V KVF MPER+T W+T+++G +++I+V
Sbjct: 148 SSFG-DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 189 FRDMVANGVQ-VDSTTVVT-VLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLY 246
F + + DS V T VL ++A +G+G I C+ K G + LV++Y
Sbjct: 207 FNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMY 266
Query: 247 SKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMV 306
SKC ++ A +F G + I ++AM++GY+ NGE +VKLF + +G + S T+V
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIV 326
Query: 307 GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK 366
G++ S +L + + +K G + +TAL +Y++ + ARK FD E+
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH 426
VA W ++ISGY QN E AL L++ M T PN T+ + L AC+ L +L GK VH
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 427 QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGH 486
+ + +AL MY+KCG++ + +F K+ V+WN +I G +G G
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506
Query: 487 EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACM 546
EAL+LF+EML G+ P VTF++I+ ACSH G V G F+ M ++ ++P +H+ACM
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566
Query: 547 VDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSV 606
VD+L RAGQL++A EFI + ++ G +W LL ACK H ++ A E+L L
Sbjct: 567 VDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRES 626
Query: 607 GYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHAT 666
YV LS IY+ + + + ++K GC+ IE+ HVFV GD H
Sbjct: 627 STYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIE 686
Query: 667 AIYAMLEKLTGKMREIGYQTETVTSLHDVEEEE 699
++ ++ +M E G+ T +S VEEEE
Sbjct: 687 ETKDLVCLVSRQMIEEGFVTVLDSSF--VEEEE 717
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 138/309 (44%), Gaps = 7/309 (2%)
Query: 15 CNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLV 74
C L Q+H+ L+ G++ L + T L G AR F ++ D+ L+ L+
Sbjct: 336 CYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLI 395
Query: 75 KGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPD---DKYGMLLHAHAIVDGF 131
G+ N+ ++ LY ++ + P++ T A + A + G +H H I GF
Sbjct: 396 SGYVQNSDNEEALILYRRMK-TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGF 454
Query: 132 GSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRD 191
G + + S+L +Y K + VF P +D V+WN +I+GL N D+++++F +
Sbjct: 455 GLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEE 514
Query: 192 MVANGVQVDSTTVVTVLPAVAELQELGVG-MGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
M+A G++ D T V ++ A + + G ++ + G +V L S+ G
Sbjct: 515 MLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAG 574
Query: 251 DISTARLLFGMIG-KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLI 309
+ A+ L + ++S +G+ E V +L+ G R SST V L
Sbjct: 575 QLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR-ESSTYVQLS 633
Query: 310 PVSSPFGHL 318
+ + G +
Sbjct: 634 GIYTALGRM 642
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 397 TEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISE 456
TE P+ T+ L+ +Q +L G+ VH I I + L++ YAKCG +++
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 457 ARQLFDSMSEKNTVTWNTIIFGYGLHG---YGHEALKLFKEMLHSGIHPSGVTFLSILYA 513
A +F+++ K+ V+WN++I GY +G + ++LF+EM I P+ T I A
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 514 CSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA 573
S G + H +V K +V + +AG +E L+ MP E
Sbjct: 128 ESSLQSSTVGRQA-HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTY 185
Query: 574 VWGTLLGACKIHKNTDIA-RVASERLFELDPGSVGYYVLLSNIYSV 618
W T++ + A +V + L E + GS YV + + S+
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSL 231
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 355 bits (911), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 213/703 (30%), Positives = 360/703 (51%), Gaps = 28/703 (3%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
QIH ++ G +D+ + + L + +F + + ++ ++ G N
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDDKYGMLLHAHAIVDGFGSNLFVC 138
S ++ + ++ + N YA + AA + + G LHAHA+ F ++ V
Sbjct: 261 LLSLALKFFKEMQ-KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR 319
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
++ +D+Y K + A+ +FD + ++N +ITG + + ++ +F ++++G+
Sbjct: 320 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 379
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
D ++ V A A ++ L G+ I LA K D V + +Y KC ++ A +
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 439
Query: 259 FGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHL 318
F + + D +++NA+I+ + NG+ ++ LF +L S T G I + G L
Sbjct: 440 FDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF-GSILKACTGGSL 498
Query: 319 HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK-------------------- 358
I VKSG SNSSV +L +YS+ I+ A K
Sbjct: 499 GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 558
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
+ ++ ++ +WN++ISGY +E A LF MM TP+ T T L CA L S
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 618
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFG 478
GK +H + K L+ ++Y+ + L+DMY+KCG++ ++R +F+ ++ VTWN +I G
Sbjct: 619 AGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG 678
Query: 479 YGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEP 538
Y HG G EA++LF+ M+ I P+ VTF+SIL AC+H GL+ +G E F+ M Y ++P
Sbjct: 679 YAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDP 738
Query: 539 LAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNT-DIARVASER 597
H++ MVDILG++G++++ALE IR MP E +W TLLG C IH+N ++A A+
Sbjct: 739 QLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAA 798
Query: 598 LFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVS 657
L LDP Y LLSN+Y+ + K + +R + KL K PGC+ +E+ HVF+
Sbjct: 799 LLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLV 858
Query: 658 GDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEK 700
GD++H IY L + +M+ + + +VEEE++
Sbjct: 859 GDKAHPRWEEIYEELGLIYSEMKP--FDDSSFVRGVEVEEEDQ 899
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 247/527 (46%), Gaps = 30/527 (5%)
Query: 55 ARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS- 113
A + F + D+ +N ++ G+ N SI ++ + R + D T+A +
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG-REGIEFDGRTFAIILKVCS 191
Query: 114 --PDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNT 171
D GM +H + G +++ S+L+D+Y K R + +VF +PE+++V+W+
Sbjct: 192 FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSA 251
Query: 172 VITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFG 231
+I G V+N +++ F++M V + +VL + A L EL +G + A K
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 232 FHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFR 291
F D V T + +Y+KC ++ A++LF + +YNAMI+GY+ ++ LF
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 292 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLN 351
L+ SG ++ G+ + L I G +KS + V+ A +Y +
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 352 EIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
+ A ++FDE + +WNA+I+ + QNG L LF M+ + P+ T + L
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 412 ACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQL----------- 460
AC GSL +G +H I + N V +LIDMY+KCG I EA ++
Sbjct: 492 ACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 461 -----FDSMSEKN----TVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSIL 511
+ M K V+WN+II GY + +A LF M+ GI P T+ ++L
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Query: 512 YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHAC--MVDILGRAGQL 556
C++ G++I ++ K E ++ + C +VD+ + G L
Sbjct: 611 DTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDL 654
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/579 (25%), Positives = 270/579 (46%), Gaps = 58/579 (10%)
Query: 97 TNLAPDNYTYAFTIAASPDD-KYGMLLHAHAIVDGFGSNLFVCSSLVDLY---------- 145
+++ N+++ F A + G HAH I+ GF FV + L+ +Y
Sbjct: 44 NSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSAS 103
Query: 146 FKFSRVGL---------------------ARKVFDEMPERDTVAWNTVITGLVRNCYYDD 184
F ++ L A F+ MP RD V+WN++++G ++N
Sbjct: 104 MVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLK 163
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVS 244
SI+VF DM G++ D T +L + L++ +GM I + + G D + L+
Sbjct: 164 SIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLD 223
Query: 245 LYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSST 304
+Y+K + +F I + + ++++A+I+G N + ++K F+E+ VS S
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 305 MVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
++ + L L + + +KS ++ V TA +Y++ + + A+ LFD S
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 365 EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKW 424
++NAMI+GY+Q AL LF +M++ + ++++ ACA + LS G
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 425 VHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGY 484
++ L +L ++ V+ A IDMY KC ++EA ++FD M ++ V+WN II + +G
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 485 GHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHA 544
G+E L LF ML S I P TF SIL AC+ G + G EI H + K + +
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEI-HSSIVKSGMASNSSVGC 521
Query: 545 CMVDILGRAGQLEKA-------------------LEFIRTMPVEPGPAVWGTLLGACKIH 585
++D+ + G +E+A LE + ++ W +++ +
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581
Query: 586 KNTDIARVASERLFELD--PGSVGYYVLL---SNIYSVG 619
+ ++ A++ R+ E+ P Y +L +N+ S G
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAG 620
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 38/222 (17%)
Query: 397 TEFTPNPVTITTT-----LSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKC 451
T+F +++TT CA+ G+L GK H + P +V L+ +Y
Sbjct: 37 TDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNS 96
Query: 452 GNISEARQLFDSMSEKNTVTWNTIIFGYG--------------------------LHGY- 484
+ A +FD M ++ V+WN +I GY L GY
Sbjct: 97 RDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYL 156
Query: 485 -GHEALK---LFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLA 540
E+LK +F +M GI G TF IL CS G +I H +V + +
Sbjct: 157 QNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI-HGIVVRVGCDTDV 215
Query: 541 EHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGAC 582
+ ++D+ + + ++L + +P E W ++ C
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGC 256
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 354 bits (908), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 188/518 (36%), Positives = 295/518 (56%), Gaps = 13/518 (2%)
Query: 264 KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCS 323
+PD ++A++ G I+ ++ +VS L+ + + G L+ +
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 324 IQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGL 383
+ S + N+ TA+ + Y++ + A +LF P K + +W A+ISG+ Q+G
Sbjct: 162 V----FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGK 217
Query: 384 TETALSLFQEMMTTEFTP-NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVST 442
A S+F EM +P+ +++ + ACA L + G+ VH L+ + + +++S
Sbjct: 218 GLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISN 277
Query: 443 ALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHP 502
ALIDMYAKC ++ A+ +F M ++ V+W ++I G HG +AL L+ +M+ G+ P
Sbjct: 278 ALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKP 337
Query: 503 SGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEF 562
+ VTF+ ++YACSH G V +G E+F M Y I P +H+ C++D+LGR+G L++A
Sbjct: 338 NEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENL 397
Query: 563 IRTMPVEPGPAVWGTLLGACKIHKNTDIA-RVASERL--FEL-DPGSVGYYVLLSNIYSV 618
I TMP P W LL ACK + R+A + F+L DP + Y+LLSNIY+
Sbjct: 398 IHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPST---YILLSNIYAS 454
Query: 619 GRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGK 678
+ K + R + ++ K PG + +E+ T VF +G+ SH I+ +L+KL +
Sbjct: 455 ASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEE 514
Query: 679 MR-EIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLD 737
MR GY +T LHD++E+EKE ++ HSE+ A+A+ L+ PGT IRI+KNLRVC D
Sbjct: 515 MRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGD 574
Query: 738 CHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
CH K IS+ITER I+VRDA R+HHFK G CSC D+W
Sbjct: 575 CHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 210/455 (46%), Gaps = 40/455 (8%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR-NC 180
LHAH + G + ++LV++Y K A +VFDEMP RD +AW +V+T L + N
Sbjct: 25 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANL 84
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLT 240
++G++ D ++ A A L + G + C + D V +
Sbjct: 85 SGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKS 144
Query: 241 GLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL------- 293
LV +Y+KCG +++A+ +F I + I++ AM+SGY +G E +++LFR L
Sbjct: 145 SLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYS 204
Query: 294 ---LVSG----------------QRVSSSTMVGLIPVSSPFGHL-HLTCSIQGYCVKS-- 331
L+SG R ++ + +SS G +L SI G V
Sbjct: 205 WTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLV 264
Query: 332 ---GAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
G S +S AL +Y++ +++ A+ +F + V +W ++I G Q+G E AL
Sbjct: 265 IALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKAL 324
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ-LIKSKNLEPNIYVSTALIDM 447
+L+ +M++ PN VT + AC+ +G + G+ + Q + K + P++ T L+D+
Sbjct: 325 ALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDL 384
Query: 448 YAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG--IHPSG 504
+ G + EA L +M + TW ++ G G +++ ++ S PS
Sbjct: 385 LGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPST 444
Query: 505 VTFLSILYA-CSHAGLVREGEEIFHDMVNKYRIEP 538
LS +YA S G V E +M + R +P
Sbjct: 445 YILLSNIYASASLWGKVSEARRKLGEM--EVRKDP 477
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/547 (20%), Positives = 228/547 (41%), Gaps = 108/547 (19%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT 109
GA HA +F + + D + ++ + ++++++ + + L PD++ ++
Sbjct: 52 GAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSAL 111
Query: 110 IAASPD---DKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT 166
+ A + +G +H H IV + ++ V SSLVD+Y K + A+ VFD + ++T
Sbjct: 112 VKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNT 171
Query: 167 VAWNTVITGLVRNCYYDDSIQVFR-----------DMVANGVQ----------------- 198
++W +++G ++ ++++++FR +++ VQ
Sbjct: 172 ISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
Query: 199 ----VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
+D + +++ A A L G + L GF ++ L+ +Y+KC D+
Sbjct: 232 RVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIA 291
Query: 255 ARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
A+ +F + D++++ ++I G +G+ E ++ L+ +++ G + + T VGLI
Sbjct: 292 AKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI----- 346
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF-----DESPEKTVA 369
CS G+ ++ R+LF D ++
Sbjct: 347 -----YACSHVGF-------------------------VEKGRELFQSMTKDYGIRPSLQ 376
Query: 370 AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQL 428
+ ++ ++GL + A +L M F P+ T LSAC + G G + L
Sbjct: 377 HYTCLLDLLGRSGLLDEAENLIHTM---PFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Query: 429 IKSKNL-EPNIYVSTALIDMYAKC---GNISEARQLFDSMSEKNTVTWNTIIFGYGLHGY 484
+ S L +P+ Y+ L ++YA G +SEAR+ M +
Sbjct: 434 VSSFKLKDPSTYI--LLSNIYASASLWGKVSEARRKLGEMEVRKDP-------------- 477
Query: 485 GHEALKLFK--EMLHSG--IHPSGVTFLSILYACSHAGLVREG-----EEIFHDMVNKYR 535
GH ++++ K E+ ++G HP +L +R G I HDM + +
Sbjct: 478 GHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEK 537
Query: 536 IEPLAEH 542
+ L H
Sbjct: 538 EKLLFWH 544
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 323 SIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNG 382
++ + VK G + ++ L +Y + A ++FDE P + AW ++++ Q
Sbjct: 24 ALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQAN 83
Query: 383 LT-ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVS 441
L+ +T ++ P+ + + ACA LGS+ G+ VH + V
Sbjct: 84 LSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK 143
Query: 442 TALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFK 493
++L+DMYAKCG ++ A+ +FDS+ KNT++W ++ GY G EAL+LF+
Sbjct: 144 SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 410 LSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNT 469
L CA+ +L+ K +H I + ++ L+++Y KCG S A Q+FD M ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 470 VTWNTIIFGYGLHGYGHEAL-KLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIF- 527
+ W +++ + L SG+ P F +++ AC++ G + G ++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 528 HDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
H +V++Y + + + + +VD+ + G L A
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSA 159
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 201/672 (29%), Positives = 354/672 (52%), Gaps = 14/672 (2%)
Query: 21 AQIHAQLILNGYQSD---LASITKLTQKLFDFGATRHARALFFSVRNP-DIFLFNVLVKG 76
+++H+ L+ GY S + ++ + K D A AR LF + D L+N ++
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA---ARRLFDGFQEKGDAVLWNSILSS 258
Query: 77 FSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGML---LHAHAIVDG-FG 132
+S + ++ L+ + + T AP++YT + A Y L +HA +
Sbjct: 259 YSTSGKSLETLELFREMHM-TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 133 SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDM 192
S L+VC++L+ +Y + ++ A ++ +M D V WN++I G V+N Y ++++ F DM
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
+A G + D ++ +++ A L L GM + K G+ + V L+ +YSKC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 253 STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS 312
F + DLI++ +I+GY N +++LFR++ + + ++ S
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 313 SPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWN 372
S + + I + ++ G + ++ + L +Y + + A ++F+ K V +W
Sbjct: 498 SVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 373 AMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK 432
+MIS NG A+ LF+ M+ T + + V + LSA A L +L+ G+ +H + K
Sbjct: 557 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 616
Query: 433 NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLF 492
++ A++DMYA CG++ A+ +FD + K + + ++I YG+HG G A++LF
Sbjct: 617 GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 493 KEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGR 552
+M H + P ++FL++LYACSHAGL+ EG M ++Y +EP EH+ C+VD+LGR
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Query: 553 AGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLL 612
A + +A EF++ M EP VW LL AC+ H +I +A++RL EL+P + G VL+
Sbjct: 737 ANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLV 796
Query: 613 SNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAML 672
SN+++ + +R K + K PGC+ IE++G H F + D+SH + IY L
Sbjct: 797 SNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
Query: 673 EKLTGKM-REIG 683
++T K+ RE G
Sbjct: 857 SEVTRKLEREKG 868
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 238/470 (50%), Gaps = 11/470 (2%)
Query: 136 FVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVAN 195
F+ LV +Y K + A KVFDEMP+R AWNT+I V N ++ ++ +M
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 196 GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA 255
GV + ++ +L A A+L+++ G + L K G+H +++ LVS+Y+K D+S A
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 256 RLLF-GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
R LF G K D + +N+++S Y+ +G+ +++LFRE+ ++G +S T+V +
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
Query: 315 FGHLHLTCSIQGYCVKSGAISNS-SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNA 373
F + L I +KS S+ V AL +Y+R ++ A ++ + V WN+
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 374 MISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN 433
+I GY QN + + AL F +M+ + V++T+ ++A +L +L G +H +
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 434 LEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFK 493
+ N+ V LIDMY+KC + F M +K+ ++W T+I GY + EAL+LF+
Sbjct: 417 WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFR 476
Query: 494 EMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRA 553
++ + + SIL A S + +EI ++ K ++ + ++ +VD+ G+
Sbjct: 477 DVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE--LVDVYGKC 534
Query: 554 ---GQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFE 600
G + E I+ V W +++ + ++ N A R+ E
Sbjct: 535 RNMGYATRVFESIKGKDV----VSWTSMISSSALNGNESEAVELFRRMVE 580
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 238/481 (49%), Gaps = 5/481 (1%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLR-TNLAPDNYTYAF 108
G+ A +F + + F +N ++ + N P+S++ALY ++R+ L ++
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 109 TIAASPDD-KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER-DT 166
A D + G LH+ + G+ S F+ ++LV +Y K + AR++FD E+ D
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 249
Query: 167 VAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCL 226
V WN++++ + +++++FR+M G +S T+V+ L A +G I
Sbjct: 250 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 227 AFKFGFH-RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIES 285
K H + YV L+++Y++CG + A + + D++ +N++I GY N +
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 369
Query: 286 SVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTT 345
+++ F +++ +G + +M +I S +L + Y +K G SN V L
Sbjct: 370 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLID 429
Query: 346 IYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
+YS+ N + F +K + +W +I+GY QN AL LF+++ + +
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489
Query: 406 ITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
+ + L A + L S+ K +H I K L + + L+D+Y KC N+ A ++F+S+
Sbjct: 490 LGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIK 548
Query: 466 EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEE 525
K+ V+W ++I L+G EA++LF+ M+ +G+ V L IL A + + +G E
Sbjct: 549 GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGRE 608
Query: 526 I 526
I
Sbjct: 609 I 609
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 144/295 (48%), Gaps = 5/295 (1%)
Query: 2 IQRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFS 61
+ SII + NL ++HA +I +G+ S+L L T + F
Sbjct: 387 VSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLR 446
Query: 62 VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGML 121
+ + D+ + ++ G++ N ++ L+ + + + D + AS K ++
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDV-AKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 122 ---LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
+H H + G + + + LVD+Y K +G A +VF+ + +D V+W ++I+
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 564
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
N +++++FR MV G+ DS ++ +L A A L L G I C + GF + +
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL 293
+V +Y+ CGD+ +A+ +F I + L+ Y +MI+ Y +G +++V+LF ++
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 679
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 350 bits (899), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 209/648 (32%), Positives = 344/648 (53%), Gaps = 28/648 (4%)
Query: 55 ARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIA-LYTHLRLRTNLAPDNYTY---AFTI 110
A L F RNPD+F PSS++A LY+ + + P Y + A I
Sbjct: 15 AGILRFLPRNPDLF----------AAIKPSSALASLYSTVSGQIEENPKRYEHHNVATCI 64
Query: 111 AA------SPDDKYGMLLHAHAIVDGF-GSNLFVCSSLVDLYFKFSRVGLARKVFDEMPE 163
A D G +H + GF + +SLV++Y K + A VF E
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 164 RDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI 223
RD +N +I+G V N D+++ +R+M ANG+ D T ++L ++ EL +
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKV 182
Query: 224 QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMI-GKPDLIAYNAMISGYTCNGE 282
LAFK GF D YV +GLV+ YSK + A+ +F + + D + +NA+++GY+
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA 342
E ++ +F ++ G VS T+ ++ + G + SI G VK+G+ S+ VS A
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 343 LTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
L +Y + ++ A +F+ E+ + WN+++ + G + L+LF+ M+ + P+
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNL----EPNIYVSTALIDMYAKCGNISEAR 458
VT+TT L C +L SL G+ +H + L N ++ +L+DMY KCG++ +AR
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 459 QLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAG 518
+FDSM K++ +WN +I GYG+ G AL +F M +G+ P +TF+ +L ACSH+G
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 519 LVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTL 578
+ EG M Y I P ++H+AC++D+LGRA +LE+A E + P+ P VW ++
Sbjct: 483 FLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSI 542
Query: 579 LGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLA 638
L +C++H N D+A VA +RL EL+P G YVL+SN+Y + + +R+ +++ +
Sbjct: 543 LSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVK 602
Query: 639 KTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQT 686
KTPGC+ I + H F +G+++H +I+ L + M Y T
Sbjct: 603 KTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYMT 650
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 348 bits (894), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 200/644 (31%), Positives = 321/644 (49%), Gaps = 56/644 (8%)
Query: 122 LHAHAIVDGFGSN--------LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVI 173
LH+ +I G N +F CS L V A K+F ++PE D V WN +I
Sbjct: 53 LHSQSITRGVAPNPTFQKKLFVFWCSRL------GGHVSYAYKLFVKIPEPDVVVWNNMI 106
Query: 174 TGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVA-ELQELGVGMGIQCLAFKFGF 232
G + + ++++ +M+ GV DS T +L + + L G + C KFG
Sbjct: 107 KGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGL 166
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
+ YV LV +YS CG + AR +F K D+ ++N MISGY E E S++L E
Sbjct: 167 GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVE 226
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
+ + +S T++ ++ S L + Y + + + AL Y+ E
Sbjct: 227 MERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGE 286
Query: 353 ID-------------------------------MARKLFDESPEKTVAAWNAMISGYTQN 381
+D +AR FD+ P + +W MI GY +
Sbjct: 287 MDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA 346
Query: 382 GLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVS 441
G +L +F+EM + P+ T+ + L+ACA LGSL G+W+ I ++ ++ V
Sbjct: 347 GCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVG 406
Query: 442 TALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIH 501
ALIDMY KCG +A+++F M +++ TW ++ G +G G EA+K+F +M I
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Query: 502 PSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALE 561
P +T+L +L AC+H+G+V + + F M + +RIEP H+ CMVD+LGRAG +++A E
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 562 FIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRN 621
+R MP+ P VWG LLGA ++H + +A +A++++ EL+P + Y LL NIY+ +
Sbjct: 527 ILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKR 586
Query: 622 FPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMRE 681
+ +R + KTPG +LIE+NG H FV+GD+SH + IY LE+L +
Sbjct: 587 WKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTF 646
Query: 682 IGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTE 725
Y +T L + + + +A F ++ PGT+
Sbjct: 647 AAYLPDTSELLFEAGD----------AYSVANRFVRLSGHPGTK 680
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 230/507 (45%), Gaps = 48/507 (9%)
Query: 19 HLAQIHAQLILNGYQSDLASITKLTQKLFDFGATR------HARALFFSVRNPDIFLFNV 72
Q+H+Q I G +A +KLF F +R +A LF + PD+ ++N
Sbjct: 49 QFKQLHSQSITRG----VAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNN 104
Query: 73 LVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD----KYGMLLHAHAIV 128
++KG+S + LY ++ L+ + PD++T+ F + D G LH H +
Sbjct: 105 MIKGWSKVDCDGEGVRLYLNM-LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVK 163
Query: 129 DGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQV 188
G GSNL+V ++LV +Y + +AR VFD + D +WN +I+G R Y++SI++
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIEL 223
Query: 189 FRDMVANGVQVDSTTVVTVLPAVAELQELGV----------------------------- 219
+M N V S T++ VL A +++++ +
Sbjct: 224 LVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAA 283
Query: 220 --GMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGY 277
M I F+ RD T +V Y + G++ AR F + D I++ MI GY
Sbjct: 284 CGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGY 343
Query: 278 TCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNS 337
G S+++FRE+ +G TMV ++ + G L + I+ Y K+ ++
Sbjct: 344 LRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV 403
Query: 338 SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT 397
V AL +Y + + A+K+F + ++ W AM+ G NG + A+ +F +M
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM 463
Query: 398 EFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISE 456
P+ +T LSAC G + K+ ++ +EP++ ++DM + G + E
Sbjct: 464 SIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKE 523
Query: 457 ARQLFDSMS-EKNTVTWNTIIFGYGLH 482
A ++ M N++ W ++ LH
Sbjct: 524 AYEILRKMPMNPNSIVWGALLGASRLH 550
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 204/645 (31%), Positives = 328/645 (50%), Gaps = 52/645 (8%)
Query: 88 ALYTHLRLRTNLAPD--------NYTYAFTI---AASPDDKYGMLLH-----AHAIVDGF 131
+LY+H + RT P N T++F + S +K +LLH A I++G
Sbjct: 22 SLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGL 81
Query: 132 GSNLFVCSSLVDL-YFKFSR-VGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVF 189
+ F S L+ SR + + K+ + + +WN I G + +S ++
Sbjct: 82 ILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLY 141
Query: 190 RDMVANGV---QVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLY 246
+ M+ +G + D T + A+L+ +G I K ++V + ++
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMF 201
Query: 247 SKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMV 306
+ CGD+ AR +F DL+++N +I+GY GE E ++ +++ + G + TM+
Sbjct: 202 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMI 261
Query: 307 GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEI------------- 353
GL+ S G L+ Y ++G + AL ++S+ +I
Sbjct: 262 GLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 321
Query: 354 ------------------DMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMM 395
D++RKLFD+ EK V WNAMI G Q + AL+LFQEM
Sbjct: 322 TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ 381
Query: 396 TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNIS 455
T+ P+ +T+ LSAC+QLG+L G W+H+ I+ +L N+ + T+L+DMYAKCGNIS
Sbjct: 382 TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNIS 441
Query: 456 EARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACS 515
EA +F + +N++T+ II G LHG A+ F EM+ +GI P +TF+ +L AC
Sbjct: 442 EALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACC 501
Query: 516 HAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVW 575
H G+++ G + F M +++ + P +H++ MVD+LGRAG LE+A + +MP+E AVW
Sbjct: 502 HGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVW 561
Query: 576 GTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKR 635
G LL C++H N ++ A+++L ELDP G YVLL +Y + A R + +R
Sbjct: 562 GALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNER 621
Query: 636 KLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMR 680
+ K PGC+ IE+NG F+ D+S + IY L L MR
Sbjct: 622 GVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 250/549 (45%), Gaps = 50/549 (9%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR- 63
N +++ + K L HL QI AQ+I+NG D + + +L F A +R L +SV+
Sbjct: 54 NPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFA----SSRLIAFCALSESRYLDYSVKI 109
Query: 64 -----NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLA---PDNYTYAFTIAASPD 115
NP+IF +NV ++GFS + +P S LY + LR PD++TY D
Sbjct: 110 LKGIENPNIFSWNVTIRGFSESENPKESFLLYKQM-LRHGCCESRPDHFTYPVLFKVCAD 168
Query: 116 DKYGMLLH---AHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTV 172
+ L H H + V ++ + ++ + ARKVFDE P RD V+WN +
Sbjct: 169 LRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCL 228
Query: 173 ITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF 232
I G + + +I V++ M + GV+ D T++ ++ + + L +L G + G
Sbjct: 229 INGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGL 288
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVK---- 288
++ L+ ++SKCGDI AR +F + K ++++ MISGY G ++ S K
Sbjct: 289 RMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDD 348
Query: 289 ---------------------------LFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLT 321
LF+E+ S + TM+ + S G L +
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 322 CSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQN 381
I Y K N ++ T+L +Y++ I A +F + + A+I G +
Sbjct: 409 IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALH 468
Query: 382 GLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYV 440
G TA+S F EM+ P+ +T LSAC G + G+ +KS+ NL P +
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 441 STALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
+ ++D+ + G + EA +L +SM E + W ++FG +HG K K++L
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD 588
Query: 500 IHPSGVTFL 508
SG+ L
Sbjct: 589 PSDSGIYVL 597
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 345 bits (886), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 208/669 (31%), Positives = 347/669 (51%), Gaps = 9/669 (1%)
Query: 20 LAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSV 79
L+ H I G SD+ ++ FG +A LF + D +N ++ G++
Sbjct: 19 LSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTS 78
Query: 80 NASPSSSIALYTHLRLRTNLAPDNYTYAFT---IAASPDDKYGMLLHAHAIVDGFGSNLF 136
+ L+T ++ R+ D Y+++ IA+ G +H I G+ N++
Sbjct: 79 CGKLEDAWCLFTCMK-RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVY 137
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDM-VAN 195
V SSLVD+Y K RV A + F E+ E ++V+WN +I G V+ + + M +
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA 197
Query: 196 GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA 255
V +D+ T +L + + + + K G + + ++S Y+ CG +S A
Sbjct: 198 AVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDA 257
Query: 256 RLLF-GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
+ +F G+ G DLI++N+MI+G++ + ES+ +LF ++ T GL+ S
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSG 317
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRL--NEIDMARKLFDESPEKTVAAWN 372
H S+ G +K G +S + AL ++Y + ++ A LF+ K + +WN
Sbjct: 318 EEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWN 377
Query: 373 AMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK 432
++I+G+ Q GL+E A+ F + ++E + + L +C+ L +L G+ +H L
Sbjct: 378 SIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS 437
Query: 433 NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGYGLHGYGHEALKL 491
N +V ++LI MY+KCG I AR+ F +S K +TV WN +I GY HG G +L L
Sbjct: 438 GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDL 497
Query: 492 FKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILG 551
F +M + + VTF +IL ACSH GL++EG E+ + M Y+I+P EH+A VD+LG
Sbjct: 498 FSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLG 557
Query: 552 RAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVL 611
RAG + KA E I +MP+ P P V T LG C+ ++A + L E++P YV
Sbjct: 558 RAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVS 617
Query: 612 LSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAM 671
LS++YS + + + AS++++ K+R + K PG + IEI F + DRS+ IY M
Sbjct: 618 LSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMM 677
Query: 672 LEKLTGKMR 680
++ LT +M+
Sbjct: 678 IKDLTQEMQ 686
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 345 bits (886), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 201/632 (31%), Positives = 320/632 (50%), Gaps = 12/632 (1%)
Query: 55 ARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIA--- 111
AR LF + +I FN L+ G++ ++ L+ R NL D +TYA +
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAR-EANLKLDKFTYAGALGFCG 159
Query: 112 ASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNT 171
D G LLH +V+G +F+ + L+D+Y K ++ A +FD ERD V+WN+
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 172 VITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVA-ELQE--LGVGMGIQCLAF 228
+I+G VR ++ + + M +G+ + + + +VL A L E + GM I C
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 229 KFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEI----- 283
K G D V T L+ +Y+K G + A LF ++ +++ YNAMISG+ EI
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 284 ESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTAL 343
+ KLF ++ G S ST ++ S L I K+ S+ + +AL
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 344 TTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNP 403
+Y+ + + + F + ++ +A+W +MI + QN E+A LF+++ ++ P
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEE 459
Query: 404 VTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDS 463
T++ +SACA +LS G+ + ++ V T+ I MYAK GN+ A Q+F
Sbjct: 460 YTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 464 MSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREG 523
+ + T++ +I HG +EAL +F+ M GI P+ FL +L AC H GLV +G
Sbjct: 520 VQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQG 579
Query: 524 EEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACK 583
+ F M N YRI P +H C+VD+LGR G+L A I + + P W LL +C+
Sbjct: 580 LKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCR 639
Query: 584 IHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGC 643
++K++ I + +ERL EL+P + G YVLL NIY+ A +RE+ + R + K P
Sbjct: 640 VYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPAL 699
Query: 644 TLIEINGTTHVFVSGDRSHSHATAIYAMLEKL 675
+ I I TH F D SH + IY MLE +
Sbjct: 700 SWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 221/439 (50%), Gaps = 9/439 (2%)
Query: 97 TNLAPDNYTYAFTIAA-SPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLAR 155
T L + Y F AA S G L H H I L++ ++L+++Y K +G AR
Sbjct: 43 TALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFAR 102
Query: 156 KVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQ 215
++FD MPER+ +++N++I+G + +Y+ ++++F + +++D T L E
Sbjct: 103 QLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERC 162
Query: 216 ELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMIS 275
+L +G + L G + +++ L+ +YSKCG + A LF + D +++N++IS
Sbjct: 163 DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLIS 222
Query: 276 GYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP---VSSPFGHLHLTCSIQGYCVKSG 332
GY G E + L ++ G +++ + ++ ++ G + +I Y K G
Sbjct: 223 GYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG 282
Query: 333 AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQ-----NGLTETA 387
+ V TAL +Y++ + A KLF P K V +NAMISG+ Q + + A
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 388 LSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDM 447
LF +M P+P T + L AC+ +L +G+ +H LI N + + ++ +ALI++
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 448 YAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
YA G+ + Q F S S+++ +W ++I + + A LF+++ S I P T
Sbjct: 403 YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTV 462
Query: 508 LSILYACSHAGLVREGEEI 526
++ AC+ + GE+I
Sbjct: 463 SLMMSACADFAALSSGEQI 481
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 218/482 (45%), Gaps = 14/482 (2%)
Query: 8 ITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDI 67
+ F + C+L +H +++NG + I L G A +LF D
Sbjct: 155 LGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQ 214
Query: 68 FLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD------KYGML 121
+N L+ G+ + + L + R L Y + A + + GM
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMH-RDGLNLTTYALGSVLKACCINLNEGFIEKGMA 273
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
+H + G ++ V ++L+D+Y K + A K+F MP ++ V +N +I+G ++
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 182 YDD-----SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
D + ++F DM G++ +T VL A + + L G I L K F D
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE 393
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
++ + L+ LY+ G F K D+ ++ +MI + N ++ES+ LFR+L S
Sbjct: 394 FIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS 453
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
R T+ ++ + F L IQGY +KSG + +SV T+ ++Y++ + +A
Sbjct: 454 HIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLA 513
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
++F E VA ++AMIS Q+G AL++F+ M T PN L AC
Sbjct: 514 NQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHG 573
Query: 417 GSLSFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKCGNISEARQL-FDSMSEKNTVTWNT 474
G ++ G Q +K+ + PN T L+D+ + G +S+A L S + + VTW
Sbjct: 574 GLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRA 633
Query: 475 II 476
++
Sbjct: 634 LL 635
Score = 143 bits (360), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 178/407 (43%), Gaps = 26/407 (6%)
Query: 326 GYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTE 385
G+ +KS + L +Y + E+ AR+LFD PE+ + ++N++ISGYTQ G E
Sbjct: 71 GHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYE 130
Query: 386 TALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI 445
A+ LF E + T L C + L G+ +H L+ L +++ LI
Sbjct: 131 QAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLI 190
Query: 446 DMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGV 505
DMY+KCG + +A LFD E++ V+WN++I GY G E L L +M G++ +
Sbjct: 191 DMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTY 250
Query: 506 TFLSILYACS---HAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEF 562
S+L AC + G + +G I H K +E ++D+ + G L++A++
Sbjct: 251 ALGSVLKACCINLNEGFIEKGMAI-HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKL 309
Query: 563 IRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNF 622
MP + + G ++ + TD A + +LF +D G
Sbjct: 310 FSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF-MDMQRRGLE------------- 355
Query: 623 PKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLE--KLTGKMR 680
P ++ V K AKT +E H + + S A++E L G
Sbjct: 356 PSPSTFSVVLKACSAAKT-----LEYGRQIHALICKNNFQSDEFIGSALIELYALMGST- 409
Query: 681 EIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIR 727
E G Q TS D+ + +V +E+L AF L + IR
Sbjct: 410 EDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 138/309 (44%), Gaps = 21/309 (6%)
Query: 6 SIITFINKACN----LPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFS 61
S + + KAC+ L + QIHA + N +QSD + L + G+T F S
Sbjct: 359 STFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAS 418
Query: 62 VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KY 118
DI + ++ N S+ L+ L +++ P+ YT + ++A D
Sbjct: 419 TSKQDIASWTSMIDCHVQNEQLESAFDLFRQL-FSSHIRPEEYTVSLMMSACADFAALSS 477
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G + +AI G + V +S + +Y K + LA +VF E+ D ++ +I+ L +
Sbjct: 478 GEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQ 537
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG-IQCLAFKFGFHRDAY 237
+ ++++ +F M +G++ + + VL A + G+ QC+ + + +
Sbjct: 538 HGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEK 597
Query: 238 VLTGLVSLYSKCGDISTARLLFGMIGKPD-LIAYNAMISGYTCNGEIESSVKLFRELLVS 296
T LV L + G +S A L G D + + A++ SS +++++ ++
Sbjct: 598 HFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALL----------SSCRVYKDSVI- 646
Query: 297 GQRVSSSTM 305
G+RV+ M
Sbjct: 647 GKRVAERLM 655
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 341 bits (875), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/622 (32%), Positives = 323/622 (51%), Gaps = 43/622 (6%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G+ +HAH I G + + LV Y F+ A+ + + + WN +I +
Sbjct: 62 GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAK 121
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
N +++ I ++ MV+ G++ D+ T +VL A E ++ G + + YV
Sbjct: 122 NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYV 181
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
L+S+Y + ++ AR LF + + D +++NA+I+ Y G + +LF ++ SG
Sbjct: 182 CNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGV 241
Query: 299 RVSSSTM----------------VGLI-----------PVS--------SPFGHLHLTCS 323
VS T +GLI PV+ S G + L
Sbjct: 242 EVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKE 301
Query: 324 IQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGL 383
I G + S +V L T+YS+ ++ A +F ++ E ++ WN++ISGY Q
Sbjct: 302 IHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK 361
Query: 384 TETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH-QLIKSKNLEPNIYVST 442
+E A L +EM+ F PN +T+ + L CA++ +L GK H +++ K + +
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWN 421
Query: 443 ALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHP 502
+L+D+YAK G I A+Q+ D MS+++ VT+ ++I GYG G G AL LFKEM SGI P
Sbjct: 422 SLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP 481
Query: 503 SGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEF 562
VT +++L ACSH+ LV EGE +F M +Y I P +H +CMVD+ GRAG L KA +
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI 541
Query: 563 IRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNF 622
I MP +P A W TLL AC IH NT I + A+E+L E+ P + GYYVL++N+Y+ ++
Sbjct: 542 IHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSW 601
Query: 623 PKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMRE- 681
K A +R + + + K PGC I+ + +F GD S A Y +L+ L M++
Sbjct: 602 SKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDN 661
Query: 682 IGYQTETVTSLHDVEEEEKELM 703
GY +++ V+ ++EL+
Sbjct: 662 AGY------AINKVQSSDEELL 677
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 240/506 (47%), Gaps = 48/506 (9%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIF---LFNVLVKGFS 78
Q+HA I +G + + KL F A+++ + N DI +NVL+ ++
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSI---IENSDILHPLPWNVLIASYA 120
Query: 79 VNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGMLLHAHAIVDGFGSNL 135
N IA Y + + + PD +TY + A + D +G ++H V + S+L
Sbjct: 121 KNELFEEVIAAYKRM-VSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSL 179
Query: 136 FVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVAN 195
+VC++L+ +Y +F +G+AR++FD M ERD V+WN VI + ++ ++F M +
Sbjct: 180 YVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFS 239
Query: 196 GVQV-----------------------------------DSTTVVTVLPAVAELQELGVG 220
GV+V D ++ L A + + + +G
Sbjct: 240 GVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLG 299
Query: 221 MGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCN 280
I LA + V L+++YSKC D+ A ++F + L +N++ISGY
Sbjct: 300 KEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQL 359
Query: 281 GEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISN-SSV 339
+ E + L RE+LV+G + +S T+ ++P+ + +L Y ++ + + +
Sbjct: 360 NKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML 419
Query: 340 STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEF 399
+L +Y++ +I A+++ D ++ + ++I GY G AL+LF+EM +
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI 479
Query: 400 TPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKCGNISEAR 458
P+ VT+ LSAC+ + G+ + ++ + + P + + ++D+Y + G +++A+
Sbjct: 480 KPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAK 539
Query: 459 QLFDSMSEKNT-VTWNTIIFGYGLHG 483
+ +M K + TW T++ +HG
Sbjct: 540 DIIHNMPYKPSGATWATLLNACHIHG 565
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 341 bits (875), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/516 (37%), Positives = 287/516 (55%), Gaps = 34/516 (6%)
Query: 105 TYAFTIAASPDDKY---GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEM 161
+Y I A+ D+ G +LHAH + G + + LV Y + +V ARKVFDEM
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 162 PERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGM 221
P+RD +I RN YY +S+ FR+M +G+++D+ V ++L A L + G
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 222 GIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNG 281
I CL KF + DA++++ L+ +YSK G++ AR +F +G+ DL+ +NAMISGY N
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 282 EIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVST 341
+ + ++ L +++ + G + T LI S F H+
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALI---SGFSHMRNE-------------------- 234
Query: 342 ALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTP 401
+++EI L P+ V +W ++ISG N E A F++M+T P
Sbjct: 235 ------EKVSEILELMCLDGYKPD--VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYP 286
Query: 402 NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
N TI T L AC L + GK +H LE + +V +AL+DMY KCG ISEA LF
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 462 DSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
+K TVT+N++IF Y HG +A++LF +M +G +TF +IL ACSHAGL
Sbjct: 347 RKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
G+ +F M NKYRI P EH+ACMVD+LGRAG+L +A E I+ M +EP VWG LL A
Sbjct: 407 LGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAA 466
Query: 582 CKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYS 617
C+ H N ++AR+A++ L EL+P + G +LL+++Y+
Sbjct: 467 CRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYA 502
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 138/296 (46%), Gaps = 33/296 (11%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
IH ++ Y+SD ++ L FG +AR +F + D+ +FN ++ G++ N+
Sbjct: 139 IHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQ 198
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFG--SNLFVCSS 140
++ L ++L + PD T+ +A++ GF N S
Sbjct: 199 ADEALNLVKDMKL-LGIKPDVITW------------------NALISGFSHMRNEEKVSE 239
Query: 141 LVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVD 200
+++L + + + D V+W ++I+GLV N + + F+ M+ +G+ +
Sbjct: 240 ILEL------------MCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPN 287
Query: 201 STTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFG 260
S T++T+LPA L + G I + G +V + L+ +Y KCG IS A +LF
Sbjct: 288 SATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFR 347
Query: 261 MIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFG 316
K + +N+MI Y +G + +V+LF ++ +G+++ T ++ S G
Sbjct: 348 KTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAG 403
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 47/294 (15%)
Query: 1 MIQRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFF 60
+I N++I+ + N +++I + L+GY+ D+ S T + L A
Sbjct: 218 VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKA----- 272
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGM 120
F+ + + P+S+ + L P T A+ K+G
Sbjct: 273 ---------FDAFKQMLTHGLYPNSATII--------TLLPACTTLAYM-------KHGK 308
Query: 121 LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNC 180
+H +++V G + FV S+L+D+Y K + A +F + P++ TV +N++I +
Sbjct: 309 EIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHG 368
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAV--AELQELGVGMGIQCLAFKFGFHRDAYV 238
D ++++F M A G ++D T +L A A L +LG + F ++ Y
Sbjct: 369 LADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNL--------FLLMQNKYR 420
Query: 239 LTG-------LVSLYSKCGDISTA-RLLFGMIGKPDLIAYNAMISGYTCNGEIE 284
+ +V L + G + A ++ M +PDL + A+++ +G +E
Sbjct: 421 IVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNME 474
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 5/212 (2%)
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
G+ +H + + + ++ L+ Y +CG + +AR++FD M +++ +I
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAE 541
+GY E+L F+EM G+ S+L A S L RE ++ H +V K+ E A
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 542 HHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIA--RVASERLF 599
+ ++D+ + G++ A + + E V+ ++ + D A V +L
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 600 ELDPGSVGYYVLLSNIYSVGRNFPKAASIREV 631
+ P + + L+S +S RN K + I E+
Sbjct: 213 GIKPDVITWNALISG-FSHMRNEEKVSEILEL 243
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/619 (31%), Positives = 318/619 (51%), Gaps = 11/619 (1%)
Query: 19 HLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFS 78
+ Q+ L +G + T L G A+ LF + D ++N L+ G+S
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 79 VNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLLHAHAIVDGFGSNL 135
N + L+ + L+ +P T + + G +H A G +
Sbjct: 128 RNGYECDAWKLFI-VMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 136 FVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVAN 195
V ++L+ Y K + +G A +F EM ++ TV+WNT+I ++ +++I VF++M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 196 GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA 255
V++ T++ +L A + L CL K G D V+T LV YS+CG + +A
Sbjct: 247 NVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSA 300
Query: 256 RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
L+ + ++ +++S Y G+++ +V F + ++ + +VG++
Sbjct: 301 ERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKS 360
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
H+ + S+ GY +KSG + + V L T+YS+ ++++ LF++ E + +WN++I
Sbjct: 361 SHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVI 420
Query: 376 SGYTQNGLTETALSLFQEMMTTE-FTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNL 434
SG Q+G TA +F +MM T P+ +TI + L+ C+QL L+ GK +H N
Sbjct: 421 SGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF 480
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKE 494
E +V TALIDMYAKCGN +A +F S+ T TWN++I GY L G H AL + E
Sbjct: 481 ENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLE 540
Query: 495 MLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG 554
M G+ P +TFL +L AC+H G V EG+ F M+ ++ I P +H+A MV +LGRA
Sbjct: 541 MREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRAC 600
Query: 555 QLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSN 614
+AL I M ++P AVWG LL AC IH+ ++ + ++F LD + G YVL+SN
Sbjct: 601 LFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSN 660
Query: 615 IYSVGRNFPKAASIREVAK 633
+Y+ + +R + K
Sbjct: 661 LYATEAMWDDVVRVRNMMK 679
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 339 bits (869), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 183/563 (32%), Positives = 315/563 (55%), Gaps = 4/563 (0%)
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG 196
+ ++L+ YF+ V AR +FDEMP+RD VAW +ITG + Y + + F +MV G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 197 VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG-DISTA 255
+ T+ +VL + ++ L G + + K G YV ++++Y+ C + A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 256 RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
L+F I + + + +I+G+T G+ +K+++++L+ V+ + + S+
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
+ I +K G SN V ++ +Y R + A+ F E +K + WN +I
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 376 SGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE 435
S ++ +E AL +FQ + F PN T T+ ++ACA + +L+ G+ +H I +
Sbjct: 287 SELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 436 PNIYVSTALIDMYAKCGNISEARQLFDSM-SEKNTVTWNTIIFGYGLHGYGHEALKLFKE 494
N+ ++ ALIDMYAKCGNI +++++F + +N V+W +++ GYG HGYG EA++LF +
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 495 MLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG 554
M+ SGI P + F+++L AC HAGLV +G + F+ M ++Y I P + + C+VD+LGRAG
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 555 QLEKALEFIRTMPVEPGPAVWGTLLGACKIHK-NTDIARVASERLFELDPGSVGYYVLLS 613
++ +A E + MP +P + WG +LGACK HK N I+R+A+ ++ EL P VG YV+LS
Sbjct: 466 KIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLS 525
Query: 614 NIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLE 673
IY+ + A +R++ + K G + I + F D+ +A+++Y++L
Sbjct: 526 YIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLG 585
Query: 674 KLTGKMREIGYQTETVTSLHDVE 696
L + RE GY E + ++D E
Sbjct: 586 LLIEETREAGYVPELDSLVNDQE 608
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 188/420 (44%), Gaps = 22/420 (5%)
Query: 17 LPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFF-SVRNPDIFLFNVLVK 75
L + A +H ++ G + L + T A L F ++ + + L+
Sbjct: 127 LAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLIT 186
Query: 76 GFSVNASPSSSIALYTHLRLRT-NLAPDNYTYAFTIAASPDD-KYGMLLHAHAIVDGFGS 133
GF+ + +Y + L + P T A +AS D G +HA I GF S
Sbjct: 187 GFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQS 246
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
NL V +S++DLY + + A+ F EM ++D + WNT+I+ L R+ +++ +F+
Sbjct: 247 NLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS-DSSEALLMFQRFE 305
Query: 194 ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIS 253
+ G + T +++ A A + L G + F+ GF+++ + L+ +Y+KCG+I
Sbjct: 306 SQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIP 365
Query: 254 TARLLFG-MIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS 312
++ +FG ++ + +L+++ +M+ GY +G +V+LF +++ SG R + ++
Sbjct: 366 DSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSAC 425
Query: 313 SPFGHLHLTCSIQGYCV---KSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK-TV 368
G + ++ + V + G + + + + R +I A +L + P K
Sbjct: 426 RHAGLVEK--GLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDE 483
Query: 369 AAWNAMI---SGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
+ W A++ + NGL +S E P V LS + GKWV
Sbjct: 484 STWGAILGACKAHKHNGL----ISRLAARKVMELKPKMVGTYVMLSYIYA----AEGKWV 535
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 339 bits (869), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 190/540 (35%), Positives = 299/540 (55%), Gaps = 18/540 (3%)
Query: 151 VGLARKVFDEMPERD-TVAWNTVITGLVRNCYYDDSIQVFRDMVANGV-QVDSTTVVTVL 208
+G ARK+FD+ P+RD + N++I + Y DS ++RD+ D+ T T+
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 209 PAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLI 268
+ + + G+ + ++FGF D YV TG+V +Y+K G + AR F + +
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 269 AYNAMISGYTCNGEIESSVKLFRELL-VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGY 327
++ A+ISGY GE++ + KLF ++ V + ++ M G + +T + + +
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGD------MTSARRLF 199
Query: 328 CVKSGAISNSSVSTALTTI--YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTE 385
+++ +V T T I Y + +ID ARKLFD PE+ + +WN MI GY QN +
Sbjct: 200 ----DEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 386 TALSLFQEMM-TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTAL 444
+ LFQEM TT P+ VTI + L A + G+LS G+W H ++ K L+ + V TA+
Sbjct: 256 EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAI 315
Query: 445 IDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSG 504
+DMY+KCG I +A+++FD M EK +WN +I GY L+G AL LF M+ P
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDE 374
Query: 505 VTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIR 564
+T L+++ AC+H GLV EG + FH M + + EH+ CMVD+LGRAG L++A + I
Sbjct: 375 ITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLIT 433
Query: 565 TMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPK 624
MP EP + + L AC +K+ + A ++ EL+P + G YVLL N+Y+ + +
Sbjct: 434 NMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDD 493
Query: 625 AASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGY 684
++ V +K + K GC+LIEIN F+SGD +H H +I+ +L L M E Y
Sbjct: 494 FGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 225/474 (47%), Gaps = 29/474 (6%)
Query: 54 HARALFFS-VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAF---T 109
+AR LF + D FL N ++K + S ALY LR T APDN+T+ +
Sbjct: 28 YARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 110 IAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAW 169
+ S G+ LH+ GF ++++V + +VD+Y KF ++G AR FDEMP R V+W
Sbjct: 88 CSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSW 147
Query: 170 NTVITGLVRNCYYDDSIQVF------RDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI 223
+I+G +R D + ++F +D+V +D + + L
Sbjct: 148 TALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL--------- 198
Query: 224 QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEI 283
F H+ T ++ Y DI AR LF + + +L+++N MI GY N +
Sbjct: 199 ----FDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQP 254
Query: 284 ESSVKLFRELLVSGQ-RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA 342
+ ++LF+E+ + T++ ++P S G L L + + V TA
Sbjct: 255 QEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTA 314
Query: 343 LTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
+ +YS+ EI+ A+++FDE PEK VA+WNAMI GY NG AL LF MM E P+
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPD 373
Query: 403 PVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
+T+ ++AC G + G KW H +++ L I ++D+ + G++ EA L
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFH-VMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLI 432
Query: 462 DSMS-EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSG-VTFLSILYA 513
+M E N + ++ + G + A ++ K+ + G L LYA
Sbjct: 433 TNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYA 486
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 140/323 (43%), Gaps = 26/323 (8%)
Query: 335 SNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAW-NAMISGYTQNGLTETALSLFQE 393
+N + T I + I ARKLFD+ P++ + N+MI Y + + +L+++
Sbjct: 8 TNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRD 67
Query: 394 MMT-TEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCG 452
+ T F P+ T TT +C+ + G +H I ++YVST ++DMYAK G
Sbjct: 68 LRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFG 127
Query: 453 NISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILY 512
+ AR FD M ++ V+W +I GY G A KLF +M H V + +++
Sbjct: 128 KMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMD 184
Query: 513 ACSHAGLVREGEEIFHDMVNKYRIEPLAEHHA-CMVDILGRAGQLEKALEFIRTMPVEPG 571
+G + +F +M +K I H C + ++ A + MP E
Sbjct: 185 GFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIK------DIDAARKLFDAMP-ERN 237
Query: 572 PAVWGTLLGA-CKIHKNTDIARVASER--LFELDPGSVGYYVLLSNIYSVGRNFPKAASI 628
W T++G C+ + + R+ E LDP V +L I G A S+
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTG-----ALSL 292
Query: 629 RE-----VAKKRKLAKTPGCTLI 646
E V +K+ K CT I
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAI 315
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 303/561 (54%), Gaps = 18/561 (3%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
LHA I +L + L+ + LA +VF+++ E + N++I +N
Sbjct: 38 LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQ 97
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
+ VF +M G+ D+ T +L A + L V + K G D YV
Sbjct: 98 PYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNA 157
Query: 242 LVSLYSKCGD--ISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR 299
L+ YS+CG + A LF + + D +++N+M+ G GE+ + +LF E+ QR
Sbjct: 158 LIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM---PQR 214
Query: 300 --VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVS-TALTTIYSRLNEIDMA 356
+S +TM+ G+ + + + ++VS + + YS+ +++MA
Sbjct: 215 DLISWNTMLD--------GYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMA 266
Query: 357 RKLFDESP--EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
R +FD+ P K V W +I+GY + GL + A L +M+ + + + + L+AC
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 415 QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNT 474
+ G LS G +H ++K NL N YV AL+DMYAKCGN+ +A +F+ + +K+ V+WNT
Sbjct: 327 ESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNT 386
Query: 475 IIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKY 534
++ G G+HG+G EA++LF M GI P VTF+++L +C+HAGL+ EG + F+ M Y
Sbjct: 387 MLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVY 446
Query: 535 RIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVA 594
+ P EH+ C+VD+LGR G+L++A++ ++TMP+EP +WG LLGAC++H DIA+
Sbjct: 447 DLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEV 506
Query: 595 SERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHV 654
+ L +LDP G Y LLSNIY+ ++ A IR K + K G + +E+ H
Sbjct: 507 LDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHE 566
Query: 655 FVSGDRSHSHATAIYAMLEKL 675
F D+SH + IY ML L
Sbjct: 567 FTVFDKSHPKSDQIYQMLGSL 587
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 255/520 (49%), Gaps = 27/520 (5%)
Query: 11 INKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLF 70
+ K NL + Q+HAQ+I DL KL L T A +F V+ P++ L
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 71 NVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLLHAHAI 127
N L++ + N+ P + +++ ++ R L DN+TY F + A + ++H H
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQ-RFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 128 VDGFGSNLFVCSSLVDLYFKFSRVGL--ARKVFDEMPERDTVAWNTVITGLVRNCYYDDS 185
G S+++V ++L+D Y + +G+ A K+F++M ERDTV+WN+++ GLV+ D+
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
++F +M Q D + T+L A +E+ + F+ R+ + +V
Sbjct: 205 RRLFDEM----PQRDLISWNTMLDGYARCREMSKAFEL----FEKMPERNTVSWSTMVMG 256
Query: 246 YSKCGDISTARLLFGMIGKP--DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSS 303
YSK GD+ AR++F + P +++ + +I+GY G ++ + +L +++ SG + ++
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 304 TMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDES 363
++ ++ + G L L I +S SN+ V AL +Y++ + A +F++
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
Query: 364 PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG- 422
P+K + +WN M+ G +G + A+ LF M P+ VT L +C G + G
Sbjct: 377 PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGI 436
Query: 423 KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGL 481
+ + + K +L P + L+D+ + G + EA ++ +M E N V W ++ +
Sbjct: 437 DYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRM 496
Query: 482 HGYGHEALKLFKEMLHSGIH-----PSGVTFLSILYACSH 516
H + + KE+L + + P + LS +YA +
Sbjct: 497 HN----EVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAE 532
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 14/230 (6%)
Query: 410 LSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNT 469
L CA L + K +H I +NL +++++ LI + C + A ++F+ + E N
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 470 VTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHD 529
N++I + + ++A +F EM G+ T+ +L ACS + ++ H+
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWL-PVVKMMHN 141
Query: 530 MVNKYRIEPLAEHHACMVDILGRAGQL--EKALEFIRTMPVEPGPAVWGTLLGACKIHKN 587
+ K + ++D R G L A++ M E W ++LG
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGGLVKAGE 200
Query: 588 TDIARVASERLFELDPGS--VGYYVLLSNIYSVGRNFPKAASIREVAKKR 635
AR RLF+ P + + +L Y+ R KA + E +R
Sbjct: 201 LRDAR----RLFDEMPQRDLISWNTMLDG-YARCREMSKAFELFEKMPER 245
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 201/763 (26%), Positives = 371/763 (48%), Gaps = 23/763 (3%)
Query: 16 NLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVK 75
++ + ++H +I G++ + + L+ G + A LF S++N D + +++
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 76 GFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP--DDKYGMLLHAHAIVDGFGS 133
++ Y+ + ++ + P+ +T+ + AS ++G +H++ IV G
Sbjct: 199 SLVGARKWREALQFYSEM-VKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPL 257
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
N+ + +SLVD Y +FS++ A +V + E+D W +V++G VRN +++ F +M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 194 ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG--D 251
+ G+Q ++ T +L + ++ L G I K GF V LV +Y KC +
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 252 ISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPV 311
+ +R+ FG + P+++++ +I G +G ++ L E++ + T+ G++
Sbjct: 378 VEASRV-FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 312 SSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAW 371
S H+ I Y ++ V +L Y+ ++D A + + +
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITY 496
Query: 372 NAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKS 431
++++ + + G E ALS+ M + +++ +SA A LG+L GK +H
Sbjct: 497 TSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVK 556
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKL 491
V +L+DMY+KCG++ +A+++F+ ++ + V+WN ++ G +G+ AL
Sbjct: 557 SGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSA 616
Query: 492 FKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILG 551
F+EM P VTFL +L ACS+ L G E F M Y IEP EH+ +V ILG
Sbjct: 617 FEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILG 676
Query: 552 RAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVL 611
RAG+LE+A + TM ++P ++ TLL AC+ N + + + L P Y+L
Sbjct: 677 RAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYIL 736
Query: 612 LSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHAT-AIYA 670
L+++Y A R + +++L+K G + +E+ G H FVS D + T IYA
Sbjct: 737 LADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYA 796
Query: 671 MLEKLTGKMREIG--YQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRI 728
+E + +++ G Y+ S HS K A+ + I P + +
Sbjct: 797 EIESIKEEIKRFGSPYRGNENASF--------------HSAKQAVVYGFIYASPEAPVHV 842
Query: 729 IKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSC 771
+KN +C DCH ++++ ++ I VRD N+ H FK+G CSC
Sbjct: 843 VKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 227/460 (49%), Gaps = 3/460 (0%)
Query: 108 FTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTV 167
+ S + G+ +H I G NL +C++L+ LY K + ARK+FDEM R
Sbjct: 31 LSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVF 90
Query: 168 AWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLA 227
AW +I+ ++ + ++ +F +M+A+G + T +V+ + A L+++ G +
Sbjct: 91 AWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV 150
Query: 228 FKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSV 287
K GF ++ V + L LYSKCG A LF + D I++ MIS + ++
Sbjct: 151 IKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREAL 210
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY 347
+ + E++ +G + T V L+ SS G L +I + G N + T+L Y
Sbjct: 211 QFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFY 269
Query: 348 SRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTIT 407
S+ ++++ A ++ + S E+ V W +++SG+ +N + A+ F EM + PN T +
Sbjct: 270 SQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYS 329
Query: 408 TTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKC-GNISEARQLFDSMSE 466
LS C+ + SL FGK +H E + V AL+DMY KC + EA ++F +M
Sbjct: 330 AILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVS 389
Query: 467 KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
N V+W T+I G HG+ + L EM+ + P+ VT +L ACS VR EI
Sbjct: 390 PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEI 449
Query: 527 FHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
H + + ++ +VD + +++ A IR+M
Sbjct: 450 -HAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 334 bits (856), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 284/529 (53%), Gaps = 37/529 (6%)
Query: 116 DKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITG 175
++ G +H A+ GFG +L + +SL+++Y K + A +F EMPE + V+WN +I G
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
+ D S++ M +G Q + T ++VL A C
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA--------------CF--------- 361
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
+ GD+ T R +F I +P + A+NAM+SGY+ E ++ FR++
Sbjct: 362 ------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF 409
Query: 296 SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDM 355
+ +T+ ++ + L I G +++ NS + + L +YS ++++
Sbjct: 410 QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEI 469
Query: 356 ARKLFDES-PEKTVAAWNAMISGYTQNGLTETALSLFQEM-MTTEFTPNPVTITTTLSAC 413
+ +FD+ E +A WN+MISG+ N L AL LF+ M T PN + T LS+C
Sbjct: 470 SECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 529
Query: 414 AQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWN 473
++L SL G+ H L+ + +V TAL DMY KCG I ARQ FD++ KNTV WN
Sbjct: 530 SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWN 589
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
+I GYG +G G EA+ L+++M+ SG P G+TF+S+L ACSH+GLV G EI M
Sbjct: 590 EMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRI 649
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARV 593
+ IEP +H+ C+VD LGRAG+LE A + P + +W LL +C++H + +AR
Sbjct: 650 HGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARR 709
Query: 594 ASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPG 642
+E+L LDP S YVLLSN YS R + +A+++ + K ++ KTPG
Sbjct: 710 VAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPG 758
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 138/553 (24%), Positives = 264/553 (47%), Gaps = 62/553 (11%)
Query: 45 KLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNY 104
K+ D G A +F + D+ +N ++ ++ +Y + + P +
Sbjct: 84 KVGDLG---EACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM-VCDGFLPSRF 139
Query: 105 TYAFTIAASP---DDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSR-VGLARKVFDE 160
T A ++A D +GM H A+ G N+FV ++L+ +Y K V +VF+
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 161 MPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLP---------AV 211
+ + + V++ VI GL R +++Q+FR M GVQVDS + +L ++
Sbjct: 200 LSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSL 259
Query: 212 AELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYN 271
+E+ +G I CLA + GF D ++ L+ +Y+K D++ A L+F + + +++++N
Sbjct: 260 SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWN 319
Query: 272 AMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC-SIQGYCVK 330
MI G+ + SV+ + SG F +TC S+ G C +
Sbjct: 320 IMIVGFGQEYRSDKSVEFLTRMRDSG-----------------FQPNEVTCISVLGACFR 362
Query: 331 SGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSL 390
SG +++ R++F P+ +V+AWNAM+SGY+ E A+S
Sbjct: 363 SG-------------------DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 391 FQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAK 450
F++M P+ T++ LS+CA+L L GK +H ++ + N ++ + LI +Y++
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE 463
Query: 451 CGNISEARQLFDS-MSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGI-HPSGVTFL 508
C + + +FD ++E + WN++I G+ + +AL LF+ M + + P+ +F
Sbjct: 464 CEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFA 523
Query: 509 SILYACSHAGLVREGEEIFHDMVNK--YRIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
++L +CS + G + FH +V K Y + E + D+ + G+++ A +F +
Sbjct: 524 TVLSSCSRLCSLLHGRQ-FHGLVVKSGYVSDSFVE--TALTDMYCKCGEIDSARQFFDAV 580
Query: 567 PVEPGPAVWGTLL 579
+ +W ++
Sbjct: 581 -LRKNTVIWNEMI 592
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 210/460 (45%), Gaps = 79/460 (17%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDE------------------ 160
G ++H + G S+ ++C+ L+DLY + ARKVFDE
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 161 -------------MPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTV 207
MPERD V+WN +I+ LVR + + ++ V++ MV +G T+ +V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 208 LPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARL-LFGMIGKPD 266
L A +++ + GM +A K G ++ +V L+S+Y+KCG I + +F + +P+
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 267 LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP----------FG 316
++Y A+I G ++ +V++FR + G +V S + ++ +S+P +G
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 317 HLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMIS 376
+ L I ++ G + ++ +L IY++ +++ A +F E PE V +WN MI
Sbjct: 265 N-ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 377 GYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
G+ Q ++ ++ M + F PN VT + L AC
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC----------------------- 360
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML 496
+ G++ R++F S+ + + WN ++ GY + + EA+ F++M
Sbjct: 361 ------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 497 HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
+ P T IL +C+ + G++I H +V + I
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQI-HGVVIRTEI 447
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 162/364 (44%), Gaps = 22/364 (6%)
Query: 234 RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL 293
RD Y ++ K GD+ A +F + + D++++N MIS G E ++ +++ +
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 294 LVSGQRVSSSTMVGLIPVSSPF--GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLN 351
+ G S T+ ++ S G + C G VK+G N V AL ++Y++
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRC--HGVAVKTGLDKNIFVGNALLSMYAKCG 187
Query: 352 EI-DMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
I D ++F+ + ++ A+I G + A+ +F+ M + V ++ L
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Query: 411 S------ACAQLGSL---SFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
S C L + GK +H L +++++ +L+++YAK +++ A +F
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 462 DSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
M E N V+WN +I G+G ++++ M SG P+ VT +S+L AC +G V
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVE 367
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTL 578
G IF + +P M+ E+A+ R M ++P +
Sbjct: 368 TGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVI 422
Query: 579 LGAC 582
L +C
Sbjct: 423 LSSC 426
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLL 122
DI +N ++ GF N + ++ L+ + L P+ ++A +++ +G
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
H + G+ S+ FV ++L D+Y K + AR+ FD + ++TV WN +I G N
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRG 601
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVA 212
D+++ ++R M+++G + D T V+VL A +
Sbjct: 602 DEAVGLYRKMISSGEKPDGITFVSVLTACS 631
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 332 bits (852), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 284/509 (55%), Gaps = 4/509 (0%)
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVS 244
S +R M NGV T +L AV +L++ KFG D +V L+S
Sbjct: 88 SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLIS 146
Query: 245 LYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSST 304
YS G A LF D++ + AMI G+ NG ++ F E+ +G + T
Sbjct: 147 GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT 206
Query: 305 MVGLIPVSSPFGHLHLTCSIQGYCVKSGAIS-NSSVSTALTTIYSRLNEIDMARKLFDES 363
+V ++ + + S+ G +++G + + + ++L +Y + + D A+K+FDE
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEM 266
Query: 364 PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGK 423
P + V W A+I+GY Q+ + + +F+EM+ ++ PN T+++ LSACA +G+L G+
Sbjct: 267 PSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGR 326
Query: 424 WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHG 483
VH + ++E N T LID+Y KCG + EA +F+ + EKN TW +I G+ HG
Sbjct: 327 RVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 484 YGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHH 543
Y +A LF ML S + P+ VTF+++L AC+H GLV EG +F M ++ +EP A+H+
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 544 ACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDP 603
ACMVD+ GR G LE+A I MP+EP VWG L G+C +HK+ ++ + A+ R+ +L P
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQP 506
Query: 604 GSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVS-GDRSH 662
G Y LL+N+YS +N+ + A +R+ K +++ K+PG + IE+ G F++ D+
Sbjct: 507 SHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKP 566
Query: 663 SHATAIYAMLEKLTGKMREIGYQTETVTS 691
+ +Y L+ + +MR + + E VT+
Sbjct: 567 LESDDLYKTLDTVGVQMR-LPDELEDVTA 594
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 193/459 (42%), Gaps = 51/459 (11%)
Query: 22 QIHAQLILNGYQSDLASITKL-----TQKLFDFGATRHARALFFSVRNPDIFLFNVLVKG 76
Q HA ++ G SD L + LFDF A LF + D+ + ++ G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDF-----ASRLFDGAEDKDVVTWTAMIDG 178
Query: 77 FSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYGMLLHAHAIVDG-FG 132
F N S S ++ + ++ +T +A + T + A+ D ++G +H + G
Sbjct: 179 FVRNGSASEAMVYFVEMK-KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVK 237
Query: 133 SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDM 192
++F+ SSLVD+Y K S A+KVFDEMP R+ V W +I G V++ +D + VF +M
Sbjct: 238 CDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEM 297
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
+ + V + T+ +VL A A + L G + C K + T L+ LY KCG +
Sbjct: 298 LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 253 STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS 312
A L+F + + ++ + AMI+G+ +G + LF +L S + T + ++
Sbjct: 358 EEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSA- 416
Query: 313 SPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWN 372
C G + ++ R N E +
Sbjct: 417 ---------------CAHGGLVEEG--RRLFLSMKGRFNM------------EPKADHYA 447
Query: 373 AMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKW-VHQLIKS 431
M+ + + GL E A +L + M P V +C GK+ ++IK
Sbjct: 448 CMVDLFGRKGLLEEAKALIERM---PMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKL 504
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
+ Y T L ++Y++ N E ++ M ++ V
Sbjct: 505 QPSHSGRY--TLLANLYSESQNWDEVARVRKQMKDQQVV 541
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 206/704 (29%), Positives = 350/704 (49%), Gaps = 47/704 (6%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGAT-RHARALFFSVRNPDIFLFNVLVKGFSVNA 81
+H+ +I G + D L FG A F + + D+ +N ++ GFS N
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENN 203
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYA--FTIAASPDD----KYGMLLHAHAIVDGF-GSN 134
+ + + L L+ P+ T A + AS D + G +H++ + + ++
Sbjct: 204 MMADAFRSFC-LMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTH 262
Query: 135 LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
+FVC+SLV Y + R+ A +F M +D V+WN VI G NC + + Q+F ++V
Sbjct: 263 VFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVH 322
Query: 195 NG-VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF-HRDAYVLTGLVSLYSKCGDI 252
G V DS T++++LP A+L +L G I + + D V L+S Y++ GD
Sbjct: 323 KGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDT 382
Query: 253 STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS 312
S A F ++ D+I++NA++ + + + + L LL + S T++ L+
Sbjct: 383 SAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Query: 313 SPFGHLHLTCSIQGYCVKSGAISNS---SVSTALTTIYSRLNEIDMARKLF-DESPEKTV 368
+ + GY VK+G + + + AL Y++ ++ A K+F S +T+
Sbjct: 443 INVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTL 502
Query: 369 AAWNAMISGYTQNGLTETALSLFQEMMTTEFT---------------------------- 400
++N+++SGY +G + A LF EM TT+ T
Sbjct: 503 VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQAR 562
Query: 401 ---PNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
PN VTI L CAQL SL + H I L +I + L+D+YAKCG++ A
Sbjct: 563 GMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHA 621
Query: 458 RQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHA 517
+F S + ++ V + ++ GY +HG G EAL ++ M S I P V ++L AC HA
Sbjct: 622 YSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHA 681
Query: 518 GLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGT 577
GL+++G +I+ + + ++P E +AC VD++ R G+L+ A F+ MPVEP +WGT
Sbjct: 682 GLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGT 741
Query: 578 LLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKL 637
LL AC + D+ + L + + G +VL+SN+Y+ + +R + KK+++
Sbjct: 742 LLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEM 801
Query: 638 AKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMRE 681
K GC+ +E++G +VFVSGD SH +I+ ++ L +M+E
Sbjct: 802 KKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 153 bits (386), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 207/435 (47%), Gaps = 14/435 (3%)
Query: 92 HLRLRTNLAPDNYTYAFTI---AASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKF 148
+ RL + D+ + + A+ D G LH G + V S++++Y K
Sbjct: 10 NFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKC 69
Query: 149 SRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDM-VANGVQVDSTTVVTV 207
R+ +K+F +M D V WN V+TGL +C ++++ F+ M A+ + S T V
Sbjct: 70 RRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIV 128
Query: 208 LPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI-STARLLFGMIGKPD 266
LP L + G + K G +D V LVS+Y+K G I A F I D
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 267 LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC---- 322
++++NA+I+G++ N + + + F +L + +T+ ++PV + ++ C
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK-NIACRSGR 247
Query: 323 SIQGYCV-KSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQN 381
I Y V +S ++ V +L + Y R+ I+ A LF K + +WN +I+GY N
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 382 GLTETALSLFQEMM-TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ-LIKSKNLEPNIY 439
A LF ++ + +P+ VTI + L CAQL L+ GK +H +++ L +
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS 367
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
V ALI YA+ G+ S A F MS K+ ++WN I+ + + L L +L+
Sbjct: 368 VGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEA 427
Query: 500 IHPSGVTFLSILYAC 514
I VT LS+L C
Sbjct: 428 ITLDSVTILSLLKFC 442
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 8/291 (2%)
Query: 281 GEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVS 340
G + V+ FR L+SG + ++ + L ++ G K G I+ S VS
Sbjct: 2 GPLRQFVQNFR--LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVS 59
Query: 341 TALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEM-MTTEF 399
++ +Y++ +D +K+F + WN +++G + + ET + F+ M E
Sbjct: 60 KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRET-MRFFKAMHFADEP 118
Query: 400 TPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNI-SEAR 458
P+ VT L C +LG GK +H I LE + V AL+ MYAK G I +A
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 459 QLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAG 518
FD +++K+ V+WN II G+ + +A + F ML P+ T ++L C+
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 519 ---LVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
R G +I +V + ++ +V R G++E+A M
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/536 (33%), Positives = 300/536 (55%), Gaps = 12/536 (2%)
Query: 157 VFDEMPERDTVAWNTVITGLVRNCYYDD--SIQVFRDMVANGVQVDSTTVVTVLPAVAEL 214
+F E + ++N +I GL N + D ++ ++R M +G++ D T V A A+L
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLT-NTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKL 145
Query: 215 QELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMI 274
+E+GVG + FK G RD ++ L+ +Y+KCG + AR LF I + D +++N+MI
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 275 SGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAI 334
SGY+ G + ++ LFR++ G T+V ++ S G L ++ +
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 335 SNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEM 394
++ + + L ++Y + ++D AR++F++ +K AW AMI+ Y+QNG + A LF EM
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 395 MTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNI 454
T +P+ T++T LSAC +G+L GK + +L+ NIYV+T L+DMY KCG +
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385
Query: 455 SEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYAC 514
EA ++F++M KN TWN +I Y G+ EAL LF M + PS +TF+ +L AC
Sbjct: 386 EEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSAC 442
Query: 515 SHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAV 574
HAGLV +G FH+M + + + P EH+ ++D+L RAG L++A EF+ P +P +
Sbjct: 443 VHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIM 502
Query: 575 WGTLLGACKIHKNTDIARVASERLFEL-DPGSVGYYVLLSNIYSVGRNFPKAASIREVAK 633
+LGAC K+ I A L E+ + + G YV+ SN+ + + + ++A +R + +
Sbjct: 503 LAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMR 562
Query: 634 KRKLAKTPGCTLIEINGTTHVFVSGDR----SHSHATAIYAML-EKLTGKMREIGY 684
R + KTPGC+ IEI G F++G + +++ +L E++ + E GY
Sbjct: 563 DRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERYEFGY 618
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 240/464 (51%), Gaps = 14/464 (3%)
Query: 10 FINKAC-NLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIF 68
F+ K C ++ L QI AQ++L+ + L K + G ++ LF P+ +
Sbjct: 42 FLLKKCISVNQLRQIQAQMLLHSVEKP----NFLIPKAVELGDFNYSSFLFSVTEEPNHY 97
Query: 69 LFNVLVKGFSVNASP-SSSIALYTHLRLRTNLAPDNYTYAFT-IAASPDDKYGM--LLHA 124
FN +++G + + ++++LY ++ + L PD +TY F IA + ++ G+ +H+
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRMKF-SGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 156
Query: 125 HAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDD 184
G ++ + SL+ +Y K +VG ARK+FDE+ ERDTV+WN++I+G Y D
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKD 216
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVS 244
++ +FR M G + D T+V++L A + L +L G ++ +A ++ + L+S
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 245 LYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSST 304
+Y KCGD+ +AR +F + K D +A+ AMI+ Y+ NG+ + KLF E+ +G + T
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 305 MVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
+ ++ G L L I+ + + N V+T L +Y + ++ A ++F+ P
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 365 EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-K 423
K A WNAMI+ Y G + AL LF M P+ +T LSAC G + G +
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCR 453
Query: 424 WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK 467
+ H++ L P I T +ID+ ++ G + EA + + K
Sbjct: 454 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 328 bits (842), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 300/534 (56%), Gaps = 9/534 (1%)
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
K G LH A+ +G S+ FV SS+ Y K A F E+ + D +W ++I L
Sbjct: 247 KEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASL 306
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
R+ ++S +F +M G+ D + ++ + ++ + G + F D+
Sbjct: 307 ARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDS 366
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKP-DLIAYNAMISGYTCNGEIESSVK---LFRE 292
V L+S+Y K +S A LF I + + A+N M+ GY G+++ VK LFR+
Sbjct: 367 TVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY---GKMKCHVKCIELFRK 423
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
+ G + S++ +I S G + L S+ Y VK+ SV +L +Y ++ +
Sbjct: 424 IQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGD 483
Query: 353 IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
+ +A ++F E+ + V WNAMI+ Y +E A++LF M++ F P+ +T+ T L A
Sbjct: 484 LTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMA 542
Query: 413 CAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTW 472
C GSL G+ +H+ I E N+ +S ALIDMYAKCG++ ++R+LFD+ ++K+ V W
Sbjct: 543 CVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCW 602
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVN 532
N +I GYG+HG A+ LF +M S + P+G TFL++L AC+HAGLV +G+++F M +
Sbjct: 603 NVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-H 661
Query: 533 KYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIAR 592
+Y ++P +H++C+VD+L R+G LE+A + +MP P +WGTLL +C H ++
Sbjct: 662 QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGI 721
Query: 593 VASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLI 646
+ER DP + GYY++L+N+YS + +A RE+ ++ + K G +++
Sbjct: 722 RMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 215 bits (548), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 161/635 (25%), Positives = 296/635 (46%), Gaps = 28/635 (4%)
Query: 2 IQRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFS 61
+ R+ + +++ +L L + +A +I G ++ +KL +G + +F
Sbjct: 25 VDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHL 84
Query: 62 VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY--- 118
V DIFL+N ++K N + S+ + + L + +PD++T ++A + +
Sbjct: 85 VTRRDIFLWNSIIKAHFSNGDYARSLCFFFSM-LLSGQSPDHFTAPMVVSACAELLWFHV 143
Query: 119 GMLLHAHAIV-DGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
G +H + GF N V +S V Y K + A VFDEMP+RD VAW +I+G V
Sbjct: 144 GTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHV 203
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVVTV---LPAVAELQELGVGMGIQCLAFKFGFHR 234
+N + + M + G VD T+ A + L L G + A K G
Sbjct: 204 QNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLAS 263
Query: 235 DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
+V + + S YSK G+ S A L F +G D+ ++ ++I+ +G++E S +F E+
Sbjct: 264 SKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ 323
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTC---SIQGYCVKSGAISNSSVSTALTTIYSRLN 351
G + LI + G + L + G+ ++ +S+V +L ++Y +
Sbjct: 324 NKGMHPDGVVISCLI---NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFE 380
Query: 352 EIDMARKLFDE-SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
+ +A KLF S E AWN M+ GY + + LF+++ + + T+ +
Sbjct: 381 LLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVI 440
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
S+C+ +G++ GK +H + +L+ I V +LID+Y K G+++ A ++F ++ N +
Sbjct: 441 SSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVI 499
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
TWN +I Y +A+ LF M+ PS +T +++L AC + G + G+ M
Sbjct: 500 TWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQ-----M 554
Query: 531 VNKYRIEPLAEHH----ACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHK 586
+++Y E E + A ++D+ + G LEK+ E + W ++ +H
Sbjct: 555 IHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA-GNQKDAVCWNVMISGYGMHG 613
Query: 587 NTDIARVASERLFELD--PGSVGYYVLLSNIYSVG 619
+ + A +++ E D P + LLS G
Sbjct: 614 DVESAIALFDQMEESDVKPTGPTFLALLSACTHAG 648
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 327 bits (837), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 207/651 (31%), Positives = 325/651 (49%), Gaps = 55/651 (8%)
Query: 37 ASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALY--THLR 94
A IT + + D G A LF + + + ++ GF + LY T ++
Sbjct: 117 AMITAMIKNKCDLG---KAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK 173
Query: 95 LRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFV-CSSLVDLYFKFSRVGL 153
R ++A + + A ++ A + G V CSS+V Y K R+
Sbjct: 174 FRDSVASNVLLSGYLRAGKWNE-------AVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 154 ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG-VQVDSTTVVTVLPAVA 212
AR +FD M ER+ + W +I G + +++D +F M G V+V+S T+ + A
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 213 ELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNA 272
+ G I L + D ++ L+S+YSK G + A+ +FG++ D +++N+
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 273 MISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG 332
+I+G +I + +LF ++ G+ + S T + I+G+ K
Sbjct: 347 LITGLVQRKQISEAYELFEKM--PGKDMVSWTDM-----------------IKGFSGKG- 386
Query: 333 AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQ 392
EI +LF PEK W AMIS + NG E AL F
Sbjct: 387 -------------------EISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFH 427
Query: 393 EMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCG 452
+M+ E PN T ++ LSA A L L G +H + N+ ++ V +L+ MY KCG
Sbjct: 428 KMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCG 487
Query: 453 NISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILY 512
N ++A ++F +SE N V++NT+I GY +G+G +ALKLF + SG P+GVTFL++L
Sbjct: 488 NTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLS 547
Query: 513 ACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGP 572
AC H G V G + F M + Y IEP +H+ACMVD+LGR+G L+ A I TMP +P
Sbjct: 548 ACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHS 607
Query: 573 AVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYS-VGRNFPKAASIREV 631
VWG+LL A K H D+A +A+++L EL+P S YV+LS +YS +G+N I +
Sbjct: 608 GVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKN-RDCDRIMNI 666
Query: 632 AKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREI 682
K +++ K PG + I + G H F++GD S + I L+ + +M I
Sbjct: 667 KKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEMELI 717
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 197/453 (43%), Gaps = 44/453 (9%)
Query: 35 DLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLR 94
++ S + + G AR+LF + ++ + ++ G+ L+ +R
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Query: 95 LRTNLAPDNYTYAFTIAASPD---DKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRV 151
++ ++ T A A D + G +H +LF+ +SL+ +Y K +
Sbjct: 267 QEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYM 326
Query: 152 GLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAV 211
G A+ VF M +D+V+WN++ITGLV+ ++ ++F M
Sbjct: 327 GEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG----------------- 369
Query: 212 AELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYN 271
+D T ++ +S G+IS LFGM+ + D I +
Sbjct: 370 ----------------------KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWT 407
Query: 272 AMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKS 331
AMIS + NG E ++ F ++L +S T ++ ++ L I G VK
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM 467
Query: 332 GAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLF 391
+++ SV +L ++Y + + A K+F E + ++N MISGY+ NG + AL LF
Sbjct: 468 NIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLF 527
Query: 392 QEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAK 450
+ ++ PN VT LSAC +G + G K+ + S N+EP ++D+ +
Sbjct: 528 SMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGR 587
Query: 451 CGNISEARQLFDSMSEK-NTVTWNTIIFGYGLH 482
G + +A L +M K ++ W +++ H
Sbjct: 588 SGLLDDASNLISTMPCKPHSGVWGSLLSASKTH 620
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 189/453 (41%), Gaps = 61/453 (13%)
Query: 135 LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
+F C+S + + + + A +F +M R V+W +I+ N + QVF +M
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM-- 107
Query: 195 NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
V+V ++ + + +LG + C + A ++TG V + G
Sbjct: 108 -PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFV----RAGRFDE 162
Query: 255 ARLLFGM--IGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS 312
A L+ + D +A N ++SGY G+ +V++F+ + V + VS S+MV
Sbjct: 163 AEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVK-EVVSCSSMV------ 215
Query: 313 SPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWN 372
GYC ++ I AR LFD E+ V W
Sbjct: 216 ------------HGYC--------------------KMGRIVDARSLFDRMTERNVITWT 243
Query: 373 AMISGYTQNGLTETALSLFQEMMTT-EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKS 431
AMI GY + G E LF M + N T+ AC G +H L+
Sbjct: 244 AMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSR 303
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKL 491
LE ++++ +L+ MY+K G + EA+ +F M K++V+WN++I G EA +L
Sbjct: 304 MPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYEL 363
Query: 492 FKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILG 551
F++M + V++ ++ S G + + E+F M K I A M+
Sbjct: 364 FEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTA-----MISAFV 414
Query: 552 RAGQLEKALEFIRTM---PVEPGPAVWGTLLGA 581
G E+AL + M V P + ++L A
Sbjct: 415 SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 325 bits (832), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 194/634 (30%), Positives = 317/634 (50%), Gaps = 4/634 (0%)
Query: 44 QKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTN-LAPD 102
+ L + G R AR +F + + DI + ++K + + ++ L++ +R+ + ++PD
Sbjct: 48 RSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPD 107
Query: 103 NYTYAFTIAA---SPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFD 159
+ + A S + YG LHA+A+ S+++V SSL+D+Y + ++ + +VF
Sbjct: 108 TSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFS 167
Query: 160 EMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGV 219
EMP R+ V W +ITGLV Y + + F +M + D+ T L A A L+++
Sbjct: 168 EMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKY 227
Query: 220 GMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTC 279
G I GF V L ++Y++CG++ LF + + D++++ ++I Y
Sbjct: 228 GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKR 287
Query: 280 NGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSV 339
G+ +V+ F ++ S + T + + L + + G + SV
Sbjct: 288 IGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSV 347
Query: 340 STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEF 399
S ++ +YS + A LF + + +W+ +I GY Q G E F M +
Sbjct: 348 SNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGT 407
Query: 400 TPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQ 459
P + + LS + + G+ VH L LE N V ++LI+MY+KCG+I EA
Sbjct: 408 KPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASM 467
Query: 460 LFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGL 519
+F + V+ +I GY HG EA+ LF++ L G P VTF+S+L AC+H+G
Sbjct: 468 IFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQ 527
Query: 520 VREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
+ G F+ M Y + P EH+ CMVD+L RAG+L A + I M + VW TLL
Sbjct: 528 LDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLL 587
Query: 580 GACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAK 639
ACK + + R A+ER+ ELDP V L+NIYS N +AA++R+ K + + K
Sbjct: 588 IACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIK 647
Query: 640 TPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLE 673
PG + I+I FVSGDR H + IY +LE
Sbjct: 648 EPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 325 bits (832), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/588 (32%), Positives = 309/588 (52%), Gaps = 58/588 (9%)
Query: 117 KYGMLLHAHAIVDGFGS--NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVIT 174
K G + A + D S N+ +++V Y + ++ +A +F EMPER+ V+WNT+I
Sbjct: 89 KLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMID 148
Query: 175 GLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHR 234
G ++ D ++++F +M + V ++V L + E M + F+ R
Sbjct: 149 GYAQSGRIDKALELFDEMPERNI-VSWNSMVKALVQRGRIDE---AMNL----FERMPRR 200
Query: 235 DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
D T +V +K G + AR LF + + ++I++NAMI+GY N I+ + +LF +++
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLF-QVM 259
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
S +TM+ T + R E++
Sbjct: 260 PERDFASWNTMI--------------------------------------TGFIRNREMN 281
Query: 355 MARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT-EFTPNPVTITTTLSAC 413
A LFD PEK V +W MI+GY +N E AL++F +M+ PN T + LSAC
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
Query: 414 AQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDS--MSEKNTVT 471
+ L L G+ +HQLI + N V++AL++MY+K G + AR++FD+ + +++ ++
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLIS 401
Query: 472 WNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMV 531
WN++I Y HG+G EA++++ +M G PS VT+L++L+ACSHAGLV +G E F D+V
Sbjct: 402 WNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Query: 532 NKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIA 591
+ EH+ C+VD+ GRAG+L+ FI + +G +L AC +H IA
Sbjct: 462 RDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIA 521
Query: 592 RVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGT 651
+ +++ E G YVL+SNIY+ +AA +R K++ L K PGC+ +++
Sbjct: 522 KEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQ 581
Query: 652 THVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEE 699
H+FV GD+SH A+ ++L L KMR + + VTS D EE E
Sbjct: 582 NHLFVVGDKSHPQFEALDSILSDLRNKMR----KNKNVTS--DAEEAE 623
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 179/413 (43%), Gaps = 51/413 (12%)
Query: 33 QSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTH 92
+ ++ S + + L G A LF + D+ + +V G + N + L+
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 93 LRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVG 152
+ R N+ N + D+ L D F S ++++ + + +
Sbjct: 228 MPER-NIISWNAMITGYAQNNRIDEADQLFQVMPERD-FAS----WNTMITGFIRNREMN 281
Query: 153 LARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG-VQVDSTTVVTVLPAV 211
A +FD MPE++ ++W T+ITG V N ++++ VF M+ +G V+ + T V++L A
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
Query: 212 AELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF--GMIGKPDLIA 269
++L L G I L K ++ V + L+++YSK G++ AR +F G++ + DLI+
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLIS 401
Query: 270 YNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS---------------- 313
+N+MI+ Y +G + +++++ ++ G + S+ T + L+ S
Sbjct: 402 WNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Query: 314 -----PFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRL---------------NEI 353
P H TC + C ++G + + V+ + +RL NE+
Sbjct: 462 RDESLPLREEHYTCLVD-LCGRAGRLKD--VTNFINCDDARLSRSFYGAILSACNVHNEV 518
Query: 354 DMARKLFD---ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNP 403
+A+++ E+ + M + Y NG E A + +M P
Sbjct: 519 SIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQP 571
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 349 RLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITT 408
++ +I ARKLFD PE+ V W +I+GY + G A LF + + + N VT T
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTA 114
Query: 409 TLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKN 468
+S + LS + + Q + E N+ +ID YA+ G I +A +LFD M E+N
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 469 TVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
V+WN+++ G EA+ LF+ M + V++ +++ + G V E +F
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFD 226
Query: 529 DMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
M + I A M+ + ++++A + + MP E A W T++
Sbjct: 227 CMPERNIISWNA-----MITGYAQNNRIDEADQLFQVMP-ERDFASWNTMI 271
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/690 (28%), Positives = 348/690 (50%), Gaps = 52/690 (7%)
Query: 5 NSIITFINKACNLPHLAQ----IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFF 60
N ++ + KAC ++ +H ++ +G + + + L G A +F
Sbjct: 173 NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFD 232
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---K 117
+ + + +N L+ G+ N +I L++ +R + + P T + ++AS + +
Sbjct: 233 EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR-KQGVEPTRVTVSTCLSASANMGGVE 291
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
G HA AIV+G + + +SL++ Y K + A VFD M E+D V WN +I+G V
Sbjct: 292 EGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYV 351
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAY 237
+ +D+I + + M ++ D T+ T++ A A + L +G +QC + F D
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 238 VLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG 297
+ + ++ +Y+KCG I A+ +F + DLI +N +++ Y +G +++LF + + G
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 298 QRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMAR 357
V I+ + + +L R ++D A+
Sbjct: 472 -------------------------------VPPNVITWNLIILSLL----RNGQVDEAK 496
Query: 358 KLFDESPEKTVA----AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSAC 413
+F + + +W M++G QNG +E A+ ++M + PN +IT LSAC
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 414 AQLGSLSFGKWVHQLIKSKNLEPNIYVS--TALIDMYAKCGNISEARQLFDSMSEKNTVT 471
A L SL G+ +H I +NL+ + VS T+L+DMYAKCG+I++A ++F S
Sbjct: 557 AHLASLHIGRTIHGYI-IRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 472 WNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMV 531
N +I Y L+G EA+ L++ + G+ P +T ++L AC+HAG + + EIF D+V
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 532 NKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIA 591
+K ++P EH+ MVD+L AG+ EKAL I MP +P + +L+ +C + T++
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELV 735
Query: 592 RVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGT 651
S +L E +P + G YV +SN Y+V ++ + +RE+ K + L K PGC+ I+I G
Sbjct: 736 DYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGE 795
Query: 652 --THVFVSGDRSHSHATAIYAMLEKLTGKM 679
HVFV+ D++H+ I ML L M
Sbjct: 796 EGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 240/497 (48%), Gaps = 5/497 (1%)
Query: 74 VKGFSVNASPSSSIALYTHLRLRT-NLAPDNYTYAFTIAASPDD-KYGMLLHAHAIVDG- 130
V N +++L T + R + P+ Y D G +HA + +G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 131 -FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVF 189
+ N ++ + LV Y K + +A +F ++ R+ +W +I R + ++ F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 190 RDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKC 249
+M+ N + D+ V V A L+ G G+ K G +V + L +Y KC
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 250 GDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLI 309
G + A +F I + +A+NA++ GY NG+ E +++LF ++ G + T+ +
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 310 PVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVA 369
S+ G + + +G ++ + T+L Y ++ I+ A +FD EK V
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 370 AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLI 429
WN +ISGY Q GL E A+ + Q M + + VT+ T +SA A+ +L GK V
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 430 KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEAL 489
+ E +I +++ ++DMYAKCG+I +A+++FDS EK+ + WNT++ Y G EAL
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461
Query: 490 KLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDI 549
+LF M G+ P+ +T+ I+ + G V E +++F M I P M++
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNG 520
Query: 550 LGRAGQLEKALEFIRTM 566
+ + G E+A+ F+R M
Sbjct: 521 MVQNGCSEEAILFLRKM 537
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/547 (25%), Positives = 249/547 (45%), Gaps = 45/547 (8%)
Query: 22 QIHAQLILNG--YQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSV 79
QIHA+++ NG Y + TKL A A LF +R ++F + ++ G
Sbjct: 91 QIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII-GVKC 149
Query: 80 NASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPD---DKYGMLLHAHAIVDGFGSNLF 136
+ L + PDN+ A ++G +H + + G +F
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVF 209
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG 196
V SSL D+Y K + A KVFDE+P+R+ VAWN ++ G V+N +++I++F DM G
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 197 VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTAR 256
V+ TV T L A A + + G +A G D + T L++ Y K G I A
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAE 329
Query: 257 LLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFG 316
++F + + D++ +N +ISGY G +E ++ + + + + + T+ L+ ++
Sbjct: 330 MVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTE 389
Query: 317 HLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMIS 376
+L L +Q YC++ S+ +++ + +Y++ I A+K+FD + EK + WN +++
Sbjct: 390 NLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLA 449
Query: 377 GYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
Y ++GL+ AL LF M PN +T W
Sbjct: 450 AYAESGLSGEALRLFYGMQLEGVPPNVIT------------------W------------ 479
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLHGYGHEALKLF 492
N+ + + L + G + EA+ +F M N ++W T++ G +G EA+
Sbjct: 480 NLIILSLL-----RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFL 534
Query: 493 KEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGR 552
++M SG+ P+ + L AC+H + G I ++ + L +VD+ +
Sbjct: 535 RKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAK 594
Query: 553 AGQLEKA 559
G + KA
Sbjct: 595 CGDINKA 601
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 189/534 (35%), Positives = 286/534 (53%), Gaps = 49/534 (9%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVG---LARKVFDEMPERDTVAWNTVITGLVR 178
+HA +V+G SNL V L+ S G A K+FDE+P+ D N V+ G +
Sbjct: 31 IHASMVVNGLMSNLSVVGELI-YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQ 89
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
+ + ++ ++ +M GV D T VL A ++L+ G + GF + YV
Sbjct: 90 SMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYV 149
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
L+ ++ CGD+ A LF K +A+++M SGY G+I+ +++LF E+ Q
Sbjct: 150 KNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQ 209
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+ + G C+K E+D AR+
Sbjct: 210 VAWNVMITG--------------------CLKC-------------------KEMDSARE 230
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
LFD EK V WNAMISGY G + AL +F+EM P+ VTI + LSACA LG
Sbjct: 231 LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 419 LSFGKWVH-QLIKSKNLEPNIYVST----ALIDMYAKCGNISEARQLFDSMSEKNTVTWN 473
L GK +H ++++ ++ +IYV T ALIDMYAKCG+I A ++F + +++ TWN
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWN 350
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
T+I G LH + ++++F+EM + P+ VTF+ ++ ACSH+G V EG + F M +
Sbjct: 351 TLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDM 409
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARV 593
Y IEP +H+ CMVD+LGRAGQLE+A F+ +M +EP VW TLLGACKI+ N ++ +
Sbjct: 410 YNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKY 469
Query: 594 ASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIE 647
A+E+L + G YVLLSNIY+ + +R++ ++ K G +LIE
Sbjct: 470 ANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 234/480 (48%), Gaps = 53/480 (11%)
Query: 16 NLPHLAQIHAQLILNGYQSDLASITKL--TQKLFDFGATRHARALFFSVRNPDIFLFNVL 73
N+ L QIHA +++NG S+L+ + +L + L GA ++A LF + PD+ + N +
Sbjct: 24 NIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHV 83
Query: 74 VKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLLHAHAIVDG 130
++G + + P +++LYT + R ++PD YT+ F + A ++ G H + G
Sbjct: 84 LRGSAQSMKPEKTVSLYTEMEKR-GVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG 142
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFR 190
F N +V ++L+ + +G+A ++FD+ + VAW+++ +G + D+++++F
Sbjct: 143 FVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFD 202
Query: 191 DMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
+M ++D +++ KC
Sbjct: 203 EMP---------------------------------------YKDQVAWNVMITGCLKCK 223
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
++ +AR LF + D++ +NAMISGY G + ++ +F+E+ +G+ T++ L+
Sbjct: 224 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNS-----SVSTALTTIYSRLNEIDMARKLFDESPE 365
+ G L + Y +++ ++S+S + AL +Y++ ID A ++F +
Sbjct: 284 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 343
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
+ ++ WN +I G + E ++ +F+EM + PN VT + AC+ G + G+
Sbjct: 344 RDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKY 402
Query: 426 HQLIKSK-NLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHG 483
L++ N+EPNI ++DM + G + EA +SM E N + W T++ ++G
Sbjct: 403 FSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYG 462
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 323/643 (50%), Gaps = 84/643 (13%)
Query: 122 LHAHAIVDGFGSNLFVCSSLV-DLYFKFSRVGL---ARKVFDEMPE---RDTVAWNTVIT 174
+HA ++ F +F SL +L ++R+GL AR VF+ + D WN+++
Sbjct: 75 VHAQVLLSDF---IFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILK 131
Query: 175 GLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHR 234
V + Y+++++++R M G+ D + +L A L G+ + G
Sbjct: 132 ANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKE 191
Query: 235 DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF---- 290
+ +V+ L++LY K G + A LF + + +++N MI G++ + ES+VK+F
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 291 RE-------------------------------LLVSGQRVSSSTMVGLIPVSSPFGHLH 319
RE + +SG VS + V + L
Sbjct: 252 REEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALS 311
Query: 320 LTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYT 379
+ + GY +K G AL +Y + ++ A LF + K + +WN++I+ +
Sbjct: 312 IAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFV 371
Query: 380 QNGLTETALSLFQE---------------------------------------MMTTEFT 400
G + ALSLF E M ++
Sbjct: 372 DAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL 431
Query: 401 PNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQL 460
N VTI LS CA+L +L+ G+ +H + ++ NI V AL++MYAKCG +SE +
Sbjct: 432 ANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLV 491
Query: 461 FDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLV 520
F+++ +K+ ++WN+II GYG+HG+ +AL +F M+ SG HP G+ +++L ACSHAGLV
Sbjct: 492 FEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLV 551
Query: 521 REGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLG 580
+G EIF+ M ++ +EP EH+AC+VD+LGR G L++A E ++ MP+EP V G LL
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLN 611
Query: 581 ACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKT 640
+C++HKN DIA + +L L+P G Y+LLSNIYS G + ++A++R +AKK+ L K
Sbjct: 612 SCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKV 671
Query: 641 PGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIG 683
G + IE+ + F SG S IY +LE L M + G
Sbjct: 672 SGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 8/229 (3%)
Query: 305 MVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
++GL + +H + + +SG S++ L ++Y+RL + AR +F+
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSG-----SLAANLISVYARLGLLLDARNVFETVS 116
Query: 365 E---KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
+ WN+++ +GL E AL L++ M T + + L AC LG
Sbjct: 117 LVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGL 176
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
+ H + L+ N++V L+ +Y K G + +A LF M +N ++WN +I G+
Sbjct: 177 CRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQ 236
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
A+K+F+ M P VT+ S+L S G + + FH M
Sbjct: 237 EYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 120/297 (40%), Gaps = 43/297 (14%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
++H +I G++ L S L G + A LF +RN I +N L+ F
Sbjct: 315 KVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAG 374
Query: 82 SPSSSIALYTHLR-------LRTNL---------------APDNYTY------------A 107
+++L++ L ++ N+ D+ Y +
Sbjct: 375 KLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANS 434
Query: 108 FTI-------AASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDE 160
TI A P G +H H I N+ V ++LV++Y K + VF+
Sbjct: 435 VTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEA 494
Query: 161 MPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVG 220
+ ++D ++WN++I G + + + ++ +F M+++G D +V VL A + + G
Sbjct: 495 IRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKG 554
Query: 221 MGI-QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIGKPDLIAYNAMIS 275
I ++ +FG +V L + G + A ++ M +P + A+++
Sbjct: 555 REIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLN 611
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 321 bits (823), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 258/478 (53%), Gaps = 32/478 (6%)
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
G + ++++T +V K D+ A LF + P++ YN++I YT N ++++
Sbjct: 37 GLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIY 96
Query: 291 RELLVSGQRVSSS-TMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSR 349
++LL + T + + G +L + G+ K G + AL +Y +
Sbjct: 97 KQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMK 156
Query: 350 LNEIDMARKLFDESPE-------------------------------KTVAAWNAMISGY 378
+++ A K+FDE E KT+ +W AMISGY
Sbjct: 157 FDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGY 216
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
T G A+ F+EM P+ +++ + L +CAQLGSL GKW+H + +
Sbjct: 217 TGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQT 276
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS 498
V ALI+MY+KCG IS+A QLF M K+ ++W+T+I GY HG H A++ F EM +
Sbjct: 277 GVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRA 336
Query: 499 GIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEK 558
+ P+G+TFL +L ACSH G+ +EG F M Y+IEP EH+ C++D+L RAG+LE+
Sbjct: 337 KVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLER 396
Query: 559 ALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSV 618
A+E +TMP++P +WG+LL +C+ N D+A VA + L EL+P +G YVLL+NIY+
Sbjct: 397 AVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYAD 456
Query: 619 GRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLT 676
+ + +R++ + + KTPG +LIE+N FVSGD S T I +L+ T
Sbjct: 457 LGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFT 514
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 126/505 (24%), Positives = 221/505 (43%), Gaps = 75/505 (14%)
Query: 4 RNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR 63
N I F+ + + +I+A +I++G +TK+ +A LF V
Sbjct: 10 ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVS 69
Query: 64 NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI--AASPDDKY-GM 120
NP++FL+N +++ ++ N+ I +Y L ++ PD +T+ F AS Y G
Sbjct: 70 NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGK 129
Query: 121 LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR-- 178
+H H G ++ ++L+D+Y KF + A KVFDEM ERD ++WN++++G R
Sbjct: 130 QVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLG 189
Query: 179 ------------------------------NCYYDDSIQVFRDMVANGVQVDSTTVVTVL 208
CY +++ FR+M G++ D ++++VL
Sbjct: 190 QMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYV-EAMDFFREMQLAGIEPDEISLISVL 248
Query: 209 PAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLI 268
P+ A+L L +G I A + GF + V L+ +YSKCG IS A LFG + D+I
Sbjct: 249 PSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVI 308
Query: 269 AYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYC 328
+++ MISGY +G +++ F E+ + + + T +GL+ S G
Sbjct: 309 SWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQ--------- 359
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
L DM R+ D E + + +I + G E A+
Sbjct: 360 -------------------EGLRYFDMMRQ--DYQIEPKIEHYGCLIDVLARAGKLERAV 398
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI-DM 447
+ + T P+ + LS+C G+L + + LEP + L+ ++
Sbjct: 399 EITK---TMPMKPDSKIWGSLLSSCRTPGNLDVA--LVAMDHLVELEPEDMGNYVLLANI 453
Query: 448 YAKCG---NISEARQLFDSMSEKNT 469
YA G ++S R++ + + K T
Sbjct: 454 YADLGKWEDVSRLRKMIRNENMKKT 478
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 178/389 (45%), Gaps = 34/389 (8%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
++A I+ G + F+ + +VD K + A ++F+++ + +N++I N
Sbjct: 29 INASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSL 88
Query: 182 YDDSIQVFRDMVANGVQV-DSTTVVTVLPAVAELQELGVGMGIQCLAFKFG--FH----- 233
Y D I++++ ++ ++ D T + + A L +G + KFG FH
Sbjct: 89 YCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTEN 148
Query: 234 ------------------------RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIA 269
RD L+S Y++ G + A+ LF ++ +++
Sbjct: 149 ALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVS 208
Query: 270 YNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCV 329
+ AMISGYT G ++ FRE+ ++G +++ ++P + G L L I Y
Sbjct: 209 WTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAE 268
Query: 330 KSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALS 389
+ G + + V AL +YS+ I A +LF + K V +W+ MISGY +G A+
Sbjct: 269 RRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIE 328
Query: 390 LFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMY 448
F EM + PN +T LSAC+ +G G ++ + + +EP I LID+
Sbjct: 329 TFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVL 388
Query: 449 AKCGNISEARQLFDSMSEK-NTVTWNTII 476
A+ G + A ++ +M K ++ W +++
Sbjct: 389 ARAGKLERAVEITKTMPMKPDSKIWGSLL 417
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 321 bits (823), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 307/554 (55%), Gaps = 6/554 (1%)
Query: 99 LAPDNYTYAFTIAASPDDKYGMLL-HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKV 157
L+P Y A + + + K +LL H ++I +GF SNL + L+DLY K V ARK+
Sbjct: 10 LSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKL 69
Query: 158 FDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQEL 217
FD + +RD V+W +I+ R Y+ D++ +F++M V+ + T +VL + +L L
Sbjct: 70 FDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCL 129
Query: 218 GVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGY 277
GM I K + V + L+SLY++CG + ARL F + + DL+++NAMI GY
Sbjct: 130 KEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGY 189
Query: 278 TCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNS 337
T N ++S LF+ +L G++ T L+ S L + + G +K G +S
Sbjct: 190 TANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSS 249
Query: 338 SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYT-QNGLTETALSLFQEMMT 396
++ +L Y + + A KL + + ++ + + A+I+G++ QN T A +F++M+
Sbjct: 250 ALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIR 309
Query: 397 TEFTPNPVTITTTLSACAQLGSLSFGKWVHQL-IKSKNLEPNIYVSTALIDMYAKCGNIS 455
+ + V +++ L C + S++ G+ +H +KS + ++ + +LIDMYAK G I
Sbjct: 310 MKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIE 369
Query: 456 EARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACS 515
+A F+ M EK+ +W ++I GYG HG +A+ L+ M H I P+ VTFLS+L ACS
Sbjct: 370 DAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACS 429
Query: 516 HAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP--VEPGPA 573
H G G +I+ M+NK+ IE EH +C++D+L R+G LE+A IR+ V +
Sbjct: 430 HTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSS 489
Query: 574 VWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAK 633
WG L AC+ H N +++VA+ +L ++P Y+ L+++Y+ + A + R++ K
Sbjct: 490 TWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMK 549
Query: 634 KR-KLAKTPGCTLI 646
+ K PG +L+
Sbjct: 550 ESGSCNKAPGYSLV 563
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 225/475 (47%), Gaps = 10/475 (2%)
Query: 18 PHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGF 77
L IH I NG+ S+L L G +HAR LF + D+ + ++ F
Sbjct: 29 KQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRF 88
Query: 78 SVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPD---DKYGMLLHAHAIVDGFGSN 134
S ++ L+ + R ++ + +TY + + D K GM +H N
Sbjct: 89 SRCGYHPDALLLFKEMH-REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGN 147
Query: 135 LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
L V S+L+ LY + ++ AR FD M ERD V+WN +I G N D S +F+ M+
Sbjct: 148 LIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLT 207
Query: 195 NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
G + D T ++L A ++ L + + LA K GF R + ++ LV+ Y KCG ++
Sbjct: 208 EGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLAN 267
Query: 255 ARLLFGMIGKPDLIAYNAMISGYTCNGEIES-SVKLFRELLVSGQRVSSSTMVGLIPVSS 313
A L K DL++ A+I+G++ S + +F++++ ++ + ++ + +
Sbjct: 268 AWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICT 327
Query: 314 PFGHLHLTCSIQGYCVKSGAIS-NSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWN 372
+ + I G+ +KS I + ++ +L +Y++ EI+ A F+E EK V +W
Sbjct: 328 TIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWT 387
Query: 373 AMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ-LIKS 431
++I+GY ++G E A+ L+ M PN VT + LSAC+ G G ++ +I
Sbjct: 388 SLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINK 447
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDS---MSEKNTVTWNTIIFGYGLHG 483
+E + +IDM A+ G + EA L S + ++ TW + HG
Sbjct: 448 HGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHG 502
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/501 (34%), Positives = 278/501 (55%), Gaps = 5/501 (0%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP--ERDTVAWNTVITGLVRN 179
+HA I+ GF + + SSL + Y + +R+ A F+ +P +R+ +WNT+++G ++
Sbjct: 26 VHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKS 85
Query: 180 --CYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAY 237
C Y D + ++ M + VDS +V + A L L G+ I LA K G +D Y
Sbjct: 86 KTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDY 145
Query: 238 VLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG 297
V LV +Y++ G + +A+ +F I + + + ++ GY + +LF + +G
Sbjct: 146 VAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTG 205
Query: 298 QRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSS-VSTALTTIYSRLNEIDMA 356
+ + T++ L+ + + G ++ I S + ++ +Y + +D A
Sbjct: 206 LALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNA 265
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
RKLF+ S ++ V W +ISG+ + A LF++M+ PN T+ L +C+ L
Sbjct: 266 RKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSL 325
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTII 476
GSL GK VH + +E + T+ IDMYA+CGNI AR +FD M E+N ++W+++I
Sbjct: 326 GSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMI 385
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
+G++G EAL F +M + P+ VTF+S+L ACSH+G V+EG + F M Y +
Sbjct: 386 NAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGV 445
Query: 537 EPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASE 596
P EH+ACMVD+LGRAG++ +A FI MPV+P + WG LL AC+IHK D+A +E
Sbjct: 446 VPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAE 505
Query: 597 RLFELDPGSVGYYVLLSNIYS 617
+L ++P YVLLSNIY+
Sbjct: 506 KLLSMEPEKSSVYVLLSNIYA 526
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 259/522 (49%), Gaps = 18/522 (3%)
Query: 6 SIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKL-----FDFGATRHARALFF 60
+++T +++A L H Q+HA++I++G++ ++ + LT DF + R +
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNL-APDNYTYAFTIAASPDD--- 116
RN + N ++ G+S + + S L + R+R + D++ F I A
Sbjct: 69 K-RNRHSW--NTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLL 125
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
+ G+L+H A+ +G + +V SLV++Y + + A+KVFDE+P R++V W ++ G
Sbjct: 126 ENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGY 185
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF-HRD 235
++ + ++F M G+ +D+ T++ ++ A + VG + ++ + F +
Sbjct: 186 LKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQS 245
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYT-CNGEIESSVKLFRELL 294
Y+ ++ +Y KC + AR LF +++ + +ISG+ C +E + LFR++L
Sbjct: 246 DYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE-AFDLFRQML 304
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
+ T+ ++ S G L S+ GY +++G ++ T+ +Y+R I
Sbjct: 305 RESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQ 364
Query: 355 MARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
MAR +FD PE+ V +W++MI+ + NGL E AL F +M + PN VT + LSAC+
Sbjct: 365 MARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACS 424
Query: 415 QLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVT-W 472
G++ G K + + + P ++D+ + G I EA+ D+M K + W
Sbjct: 425 HSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAW 484
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGV-TFLSILYA 513
++ +H A ++ +++L S V LS +YA
Sbjct: 485 GALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYA 526
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 261/481 (54%), Gaps = 36/481 (7%)
Query: 232 FH-RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
FH +DA+V+ L+ + S + A +F + P++ Y AMI G+ +G V L+
Sbjct: 56 FHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLY 115
Query: 291 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRL 350
++ + + + ++ L + I +K G S+ SV + IY +
Sbjct: 116 HRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKS 171
Query: 351 NEIDMARKLFDESPE-------------------------------KTVAAWNAMISGYT 379
E+ A+K+FDE P+ K W AMI G
Sbjct: 172 GELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLV 231
Query: 380 QNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIY 439
+N AL LF+EM + N T LSAC+ LG+L G+WVH ++++ +E + +
Sbjct: 232 RNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF 291
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
V ALI+MY++CG+I+EAR++F M +K+ +++NT+I G +HG EA+ F++M++ G
Sbjct: 292 VGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 351
Query: 500 IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
P+ VT +++L ACSH GL+ G E+F+ M + +EP EH+ C+VD+LGR G+LE+A
Sbjct: 352 FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 411
Query: 560 LEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVG 619
FI +P+EP + GTLL ACKIH N ++ ++RLFE + G YVLLSN+Y+
Sbjct: 412 YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASS 471
Query: 620 RNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKM 679
+ ++ IRE + + K PGC+ IE++ H F+ GD +H H AIY L++L +
Sbjct: 472 GKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRIL 531
Query: 680 R 680
R
Sbjct: 532 R 532
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 227/496 (45%), Gaps = 69/496 (13%)
Query: 3 QRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSV 62
+R ++I+ + N+ H+ IHA++I + D + +L + + +A +F V
Sbjct: 28 RRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLL 122
NP+++L+ ++ GF + + ++LY H + ++ PDNY + A D K +
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLY-HRMIHNSVLPDNYVITSVLKAC-DLKVCREI 145
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER------------------ 164
HA + GFGS+ V ++++Y K + A+K+FDEMP+R
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 165 -------------DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAV 211
DTV W +I GLVRN + ++++FR+M V + T V VL A
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Query: 212 AELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYN 271
++L L +G + +V L+++YS+CGDI+ AR +F ++ D+I+YN
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYN 325
Query: 272 AMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKS 331
MISG +G ++ FR+++ G R + T+V L+ S G L + +
Sbjct: 326 TMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV------- 378
Query: 332 GAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLF 391
+ +++F+ P+ + + ++ + G E A
Sbjct: 379 ---------------------FNSMKRVFNVEPQ--IEHYGCIVDLLGRVGRLEEAYRFI 415
Query: 392 QEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAK 450
+ + P+ + + T LSAC G++ G K +L +S+N + YV L ++YA
Sbjct: 416 ENI---PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYV--LLSNLYAS 470
Query: 451 CGNISEARQLFDSMSE 466
G E+ ++ +SM +
Sbjct: 471 SGKWKESTEIRESMRD 486
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 197/439 (44%), Gaps = 32/439 (7%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
+HA I + FV L+ + V A VF + + + +I G V +
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAV---------AELQELGVG----MGIQCLA- 227
D + ++ M+ N V D+ + +VL A A++ +LG G +G++ +
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEI 167
Query: 228 -------------FKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMI 274
F RD T +++ YS+CG I A LF + D + + AMI
Sbjct: 168 YGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMI 227
Query: 275 SGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAI 334
G N E+ +++LFRE+ + + T V ++ S G L L + +
Sbjct: 228 DGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRME 287
Query: 335 SNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEM 394
++ V AL +YSR +I+ AR++F +K V ++N MISG +G + A++ F++M
Sbjct: 288 LSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDM 347
Query: 395 MTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKCGN 453
+ F PN VT+ L+AC+ G L G V +K N+EP I ++D+ + G
Sbjct: 348 VNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGR 407
Query: 454 ISEARQLFDSMS-EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGV-TFLSIL 511
+ EA + +++ E + + T++ +HG K+ K + S SG LS L
Sbjct: 408 LEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNL 467
Query: 512 YACSHAGLVREGEEIFHDM 530
YA S G +E EI M
Sbjct: 468 YASS--GKWKESTEIRESM 484
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/604 (29%), Positives = 302/604 (50%), Gaps = 41/604 (6%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
LHA +V + F+ S L+ Y + R A VFDE+ R+ ++N ++
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 182 YDDSIQVFRDMV------ANGVQVDSTTVVTVLPAVAELQELGVG---MGIQCLAFKFGF 232
Y D+ +F + ++ + DS ++ VL A++ + +G + + GF
Sbjct: 104 YFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF 163
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
D +V G+++ Y+KC +I +AR +F + + D++++N+MISGY+ +G E K+++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 293 LLV-SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLN 351
+L S + + T++ + L + +++ + S+ A+ Y++
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 352 EIDMARKLFDESPEKT-------------------------------VAAWNAMISGYTQ 380
+D AR LFDE EK ++ WNAMISG Q
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQ 343
Query: 381 NGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYV 440
N E ++ F+EM+ PN VT+++ L + +L GK +H + NIYV
Sbjct: 344 NNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYV 403
Query: 441 STALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGI 500
+T++ID YAK G + A+++FD+ +++ + W II Y +HG A LF +M G
Sbjct: 404 TTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGT 463
Query: 501 HPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL 560
P VT ++L A +H+G + IF M+ KY IEP EH+ACMV +L RAG+L A+
Sbjct: 464 KPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAM 523
Query: 561 EFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGR 620
EFI MP++P VWG LL + + +IAR A +RLFE++P + G Y +++N+Y+
Sbjct: 524 EFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAG 583
Query: 621 NFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMR 680
+ +A +R K+ L K PG + IE F++ D S + +Y ++E L M
Sbjct: 584 RWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMS 643
Query: 681 EIGY 684
+ Y
Sbjct: 644 DKEY 647
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 191/459 (41%), Gaps = 80/459 (17%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q+H +I G+ SD+ + AR +F + D+ +N ++ G+S +
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG 212
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGMLLHAHAIVDGFGSNLFVC 138
S +Y + ++ P+ T A S D +G+ +H I + +L +C
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTV------------------------------- 167
++++ Y K + AR +FDEM E+D+V
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 168 AWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLA 227
WN +I+GL++N ++++ I FR+M+ G + ++ T+ ++LP++ L G I A
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 228 FKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSV 287
+ G + YV T ++ Y+K G + A+ +F LIA+ A+I+ Y +G+ +S+
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHL------------------------HLTCS 323
LF ++ G + T+ ++ S F H H C
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVL---SAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 324 IQGYCVKSGAISN-------------SSVSTALTTIYSRLNEIDMAR----KLFDESPEK 366
+ ++G +S+ + V AL S L ++++AR +LF+ PE
Sbjct: 510 VS-VLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPEN 568
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
T + M + YTQ G E A + +M P T
Sbjct: 569 T-GNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGT 606
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 35/314 (11%)
Query: 6 SIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNP 65
S+ ++ +L ++H ++I N Q DL+ + G+ +ARALF +
Sbjct: 239 SVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK 298
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLR------------------------------L 95
D + ++ G+ + ++AL++ + +
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMI 358
Query: 96 RTNLAPDNYTYAF---TIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVG 152
R P+ T + ++ S + K G +HA AI +G +N++V +S++D Y K +
Sbjct: 359 RCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLL 418
Query: 153 LARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVA 212
A++VFD +R +AW +IT + D + +F M G + D T+ VL A A
Sbjct: 419 GAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFA 478
Query: 213 ELQELGVGMGI-QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIGKPDLIAY 270
+ + I + K+ +VS+ S+ G +S A + M P +
Sbjct: 479 HSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVW 538
Query: 271 NAMISGYTCNGEIE 284
A+++G + G++E
Sbjct: 539 GALLNGASVLGDLE 552
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/667 (27%), Positives = 344/667 (51%), Gaps = 12/667 (1%)
Query: 21 AQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVN 80
++H ++I G D T L G A +F + D+ ++ LV N
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 81 ASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLF---- 136
++ ++ + + + PD T + + G L A ++ +F
Sbjct: 181 GEVVKALRMFKCM-VDDGVEPDAVTMISVVEGCAE--LGCLRIARSVHGQITRKMFDLDE 237
Query: 137 -VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVAN 195
+C+SL+ +Y K + + ++F+++ +++ V+W +I+ R + + +++ F +M+ +
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297
Query: 196 GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLT-GLVSLYSKCGDIST 254
G++ + T+ +VL + + + G + A + + L+ LV LY++CG +S
Sbjct: 298 GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD 357
Query: 255 ARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
+ ++ +++A+N++IS Y G + ++ LFR+++ + + T+ I
Sbjct: 358 CETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN 417
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAM 374
G + L I G+ +++ +S+ V +L +YS+ +D A +F++ ++V WN+M
Sbjct: 418 AGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSM 476
Query: 375 ISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNL 434
+ G++QNG + A+SLF M + N VT + AC+ +GSL GKWVH + L
Sbjct: 477 LCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL 536
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKE 494
+ +++ TALIDMYAKCG+++ A +F +MS ++ V+W+++I YG+HG A+ F +
Sbjct: 537 K-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQ 595
Query: 495 MLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG 554
M+ SG P+ V F+++L AC H+G V EG+ F +++ + + P +EH AC +D+L R+G
Sbjct: 596 MVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSPNSEHFACFIDLLSRSG 654
Query: 555 QLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSN 614
L++A I+ MP +VWG+L+ C+IH+ DI + L ++ GYY LLSN
Sbjct: 655 DLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSN 714
Query: 615 IYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEK 674
IY+ + + +R K L K PG + IEI+ F +G+ + IY L
Sbjct: 715 IYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGN 774
Query: 675 LTGKMRE 681
L E
Sbjct: 775 LQNLTNE 781
Score = 246 bits (629), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/563 (27%), Positives = 289/563 (51%), Gaps = 15/563 (2%)
Query: 13 KACN-LPHLAQIHAQLILNG-YQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLF 70
++C+ L ++Q+HA L++ G + D +TKL + G+ +R +F + PD F++
Sbjct: 9 RSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMY 68
Query: 71 NVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK----YGMLLHAHA 126
VL+K ++I LY L T + + + A + G +H
Sbjct: 69 GVLIKCNVWCHLLDAAIDLYHRLVSETT-QISKFVFPSVLRACAGSREHLSVGGKVHGRI 127
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSI 186
I G + + +SL+ +Y + + A KVFD MP RD VAW+T+++ + N ++
Sbjct: 128 IKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKAL 187
Query: 187 QVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLY 246
++F+ MV +GV+ D+ T+++V+ AEL L + + + F D + L+++Y
Sbjct: 188 RMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMY 247
Query: 247 SKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMV 306
SKCGD+ ++ +F I K + +++ AMIS Y E +++ F E++ SG + T+
Sbjct: 248 SKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 307 GLIPVSSPFGHLHLTCSIQGYCVKSGAISN-SSVSTALTTIYSRLNEIDMARKLFDESPE 365
++ G + S+ G+ V+ N S+S AL +Y+ ++ + +
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD 367
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
+ + AWN++IS Y G+ AL LF++M+T P+ T+ +++SAC G + GK +
Sbjct: 368 RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYG 485
H + ++ +V +LIDMY+K G++ A +F+ + ++ VTWN+++ G+ +G
Sbjct: 428 HGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNS 486
Query: 486 HEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAE--HH 543
EA+ LF M HS + + VTFL+++ ACS G + +G+ + H ++ I L +
Sbjct: 487 VEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI----ISGLKDLFTD 542
Query: 544 ACMVDILGRAGQLEKALEFIRTM 566
++D+ + G L A R M
Sbjct: 543 TALIDMYAKCGDLNAAETVFRAM 565
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 176/350 (50%), Gaps = 4/350 (1%)
Query: 232 FHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFR 291
RD +T L+ Y+ G ++RL+F PD Y +I +++++ L+
Sbjct: 30 LRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYH 89
Query: 292 ELLVSGQRVSSSTMVGLI-PVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRL 350
L+ ++S ++ + HL + + G +K G ++ + T+L +Y +
Sbjct: 90 RLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQT 149
Query: 351 NEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
+ A K+FD P + + AW+ ++S +NG AL +F+ M+ P+ VT+ + +
Sbjct: 150 GNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVV 209
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
CA+LG L + VH I K + + + +L+ MY+KCG++ + ++F+ +++KN V
Sbjct: 210 EGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAV 269
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
+W +I Y + +AL+ F EM+ SGI P+ VT S+L +C GL+REG+ + H
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSV-HGF 328
Query: 531 VNKYRIEPLAEHHA-CMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
+ ++P E + +V++ G+L +R + + W +L+
Sbjct: 329 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS-DRNIVAWNSLI 377
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 163/503 (32%), Positives = 274/503 (54%), Gaps = 9/503 (1%)
Query: 154 ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAE 213
AR VF+ + WN++I G + D ++ +++M+ G D T VL A +
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 214 LQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAM 273
L+++ G + K GF + YV T L+ +Y CG+++ +F I + +++A+ ++
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP--------VSSPFGHLHLTCSIQ 325
ISG+ N +++ FRE+ +G + + + MV L+ V+ + H L
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 326 GYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTE 385
+S N ++T+L +Y++ ++ AR LFD PE+T+ +WN++I+GY+QNG E
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 386 TALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI 445
AL +F +M+ P+ VT + + A G G+ +H + + + AL+
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALV 359
Query: 446 DMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG-IHPSG 504
+MYAK G+ A++ F+ + +K+T+ W +I G HG+G+EAL +F+ M G P G
Sbjct: 360 NMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDG 419
Query: 505 VTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIR 564
+T+L +LYACSH GLV EG+ F +M + + +EP EH+ CMVDIL RAG+ E+A ++
Sbjct: 420 ITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVK 479
Query: 565 TMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPK 624
TMPV+P +WG LL C IH+N ++ + E + G YVLLSNIY+ +
Sbjct: 480 TMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWAD 539
Query: 625 AASIREVAKKRKLAKTPGCTLIE 647
IRE K +++ K G + +E
Sbjct: 540 VKLIRESMKSKRVDKVLGHSSVE 562
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 264/499 (52%), Gaps = 30/499 (6%)
Query: 7 IITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGAT-------RHARALF 59
I++ + +L L Q+H +I + ++ +++L DF T +AR++F
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRL----IDFCTTCPETMNLSYARSVF 64
Query: 60 FSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DD 116
S+ P ++++N +++G+S + +P ++ Y + LR +PD +T+ + + A D
Sbjct: 65 ESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEM-LRKGYSPDYFTFPYVLKACSGLRDI 123
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
++G +H + GF N++V + L+ +Y V +VF+++P+ + VAW ++I+G
Sbjct: 124 QFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGF 183
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG----IQCLAF---- 228
V N + D+I+ FR+M +NGV+ + T +V +L A +++ G +Q L F
Sbjct: 184 VNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYF 243
Query: 229 --KFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESS 286
K GF + + T L+ +Y+KCGD+ TAR LF + + L+++N++I+GY+ NG+ E +
Sbjct: 244 QSKVGF--NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEA 301
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
+ +F ++L G T + +I S G L SI Y K+G + ++++ AL +
Sbjct: 302 LCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNM 361
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT-EFTPNPVT 405
Y++ + + A+K F++ +K AW +I G +G ALS+FQ M TP+ +T
Sbjct: 362 YAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421
Query: 406 ITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
L AC+ +G + G ++ ++ LEP + ++D+ ++ G EA +L +M
Sbjct: 422 YLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTM 481
Query: 465 SEK-NTVTWNTIIFGYGLH 482
K N W ++ G +H
Sbjct: 482 PVKPNVNIWGALLNGCDIH 500
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 285/533 (53%), Gaps = 5/533 (0%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G LH + G + V +SL+ +Y KFSR RKVFDEM RDTV++ ++I +
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAEL-QELGVGMGIQCLAFKFGFHRDAY 237
+ +++++ ++M G S V ++L + V L +++
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 238 VL-TGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
+L T LV +Y K D + A +F + + +++ AMISG N E V LFR +
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 297 GQRVSSSTMVGLIPVSSPFGH-LHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDM 355
R + T++ ++P + L I G+ + G ++ ++ A T+Y R + +
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSL 305
Query: 356 ARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQ 415
+R LF+ S + V W++MISGY + G ++L +M N VT+ +SAC
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTN 365
Query: 416 LGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTI 475
LSF VH I +I + ALIDMYAKCG++S AR++F ++EK+ V+W+++
Sbjct: 366 STLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSM 425
Query: 476 IFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYR 535
I YGLHG+G EAL++FK M+ G + FL+IL AC+HAGLV E + IF KY
Sbjct: 426 INAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYH 484
Query: 536 IEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIA-RVA 594
+ EH+AC +++LGR G+++ A E MP++P +W +LL AC+ H D+A ++
Sbjct: 485 MPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKII 544
Query: 595 SERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIE 647
+ L + +P + YVLLS I++ N+ A +R V ++RKL K G + IE
Sbjct: 545 ANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 200/429 (46%), Gaps = 29/429 (6%)
Query: 173 ITGLVRNCYYDDSIQVFRDMVAN-GVQVDSTTVVTVLPAVAELQE-LGVGMGIQCLAFKF 230
+ GLV + +YD+++++++ + + G + + +V+ A A QE +G + CL K
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
G D V L+S+Y+K R +F + D ++Y ++I+ +G + ++KL
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 291 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSV----------- 339
+E+ G IP S L C+ G K + ++ V
Sbjct: 137 KEMY----------FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVL 186
Query: 340 -STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE 398
STAL +Y + ++ A +FD+ K +W AMISG N E + LF+ M
Sbjct: 187 LSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQREN 246
Query: 399 FTPNPVTITTTLSACAQL--GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISE 456
PN VT+ + L AC +L GS S K +H + ++ A + MY +CGN+S
Sbjct: 247 LRPNRVTLLSVLPACVELNYGS-SLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSL 305
Query: 457 ARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSH 516
+R LF++ ++ V W+++I GY G E + L +M GI + VT L+I+ AC++
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTN 365
Query: 517 AGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWG 576
+ L+ + ++ + + +A ++D+ + G L A E + E W
Sbjct: 366 STLLSFASTVHSQILKCGFMSHILLGNA-LIDMYAKCGSLSAAREVFYEL-TEKDLVSWS 423
Query: 577 TLLGACKIH 585
+++ A +H
Sbjct: 424 SMINAYGLH 432
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 131/276 (47%), Gaps = 9/276 (3%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT 109
G +R LF + + D+ +++ ++ G++ S + L +R + + ++ T
Sbjct: 301 GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR-KEGIEANSVTLLAI 359
Query: 110 IAASPDD---KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT 166
++A + + +H+ + GF S++ + ++L+D+Y K + AR+VF E+ E+D
Sbjct: 360 VSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDL 419
Query: 167 VAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAV--AELQELGVGMGIQ 224
V+W+++I + + +++++F+ M+ G +VD + +L A A L E + Q
Sbjct: 420 VSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ 479
Query: 225 CLAFKFGFHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIGKPDLIAYNAMISGYTCNGEI 283
+ + Y ++L + G I A + M KP +++++S +G +
Sbjct: 480 AGKYHMPVTLEHYAC--YINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 284 ESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 319
+ + K+ L+ + + + V L + + G+ H
Sbjct: 538 DVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYH 573
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 284/531 (53%), Gaps = 14/531 (2%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G+ +H +A+ G ++ V +SL+ +Y K + +A ++F + +RD V+W+ +I +
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
+D++I +FRDM+ ++ ++ T+ +VL A + +G I C A K +
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
T ++S+Y+KCG S A F + D +A+NA+ GYT G+ + +++ + + G
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGV 498
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
S TMVG++ + + G +K G S V+ AL ++++ + + A
Sbjct: 499 CPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 359 LFDESP-EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
LFD+ EK+ +WN M++GY +G E A++ F++M +F PN VT + A A+L
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELS 618
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIF 477
+L G VH + V +L+DMYAKCG I + + F +S K V+WNT++
Sbjct: 619 ALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLS 678
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
Y HG A+ LF M + + P V+FLS+L AC HAGLV EG+ IF +M +++IE
Sbjct: 679 AYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIE 738
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASER 597
EH+ACMVD+LG+AG +A+E +R M V+ VWG LL + ++H N ++ A +
Sbjct: 739 AEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQ 798
Query: 598 LFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEI 648
L +L+P + +Y + + EV ++ K P C+ IE+
Sbjct: 799 LVKLEPLNPSHY-------------SQDRRLGEVNNVSRIKKVPACSWIEV 836
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 160/613 (26%), Positives = 305/613 (49%), Gaps = 14/613 (2%)
Query: 2 IQRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFS 61
I +++ + + N L Q+H LI++G L +L F +R +F S
Sbjct: 3 INYTNLLLMLRECKNFRCLLQVHGSLIVSG----LKPHNQLINAYSLFQRQDLSRVIFDS 58
Query: 62 VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDDKY 118
VR+P + L+N +++G++ ++ + ++ + PD Y++ F + A S D K
Sbjct: 59 VRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKK 118
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G+ +H G S++++ ++LV++Y K + AR+VFD+M +D V WNT+++GL +
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQ 178
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
N ++ +F DM + V +D ++ ++PAV++L++ V + L K GF +
Sbjct: 179 NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFA 235
Query: 239 LT-GLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG 297
+ GL+ +Y C D+ A +F + + D ++ M++ Y NG E ++LF +
Sbjct: 236 FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYD 295
Query: 298 QRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMAR 357
R++ + ++ G L +I Y V+ G I + SV+T+L ++YS+ E+++A
Sbjct: 296 VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAE 355
Query: 358 KLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
+LF ++ V +W+AMI+ Y Q G + A+SLF++MM PN VT+T+ L CA +
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIF 477
+ GK +H ++E + +TA+I MYAKCG S A + F+ + K+ V +N +
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
GY G ++A ++K M G+ P T + +L C+ G ++ ++
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTD--IARVAS 595
HA ++++ + L A+ E W ++ +H + +A
Sbjct: 536 ECHVAHA-LINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQ 594
Query: 596 ERLFELDPGSVGY 608
++ + P +V +
Sbjct: 595 MKVEKFQPNAVTF 607
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR-NPDIFLFNVLVKGFSVNA 81
++ Q+I +G+ S+ L A A LF +N+++ G+ ++
Sbjct: 524 VYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLLHAHAIVDGFGSNLFVC 138
++A + +++ P+ T+ + A+ + + GM +H+ I GF S V
Sbjct: 584 QAEEAVATFRQMKVE-KFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVG 642
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+SLVD+Y K + + K F E+ + V+WNT+++ + ++ +F M N ++
Sbjct: 643 NSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELK 702
Query: 199 VDSTTVVTVLPA 210
DS + ++VL A
Sbjct: 703 PDSVSFLSVLSA 714
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 292/553 (52%), Gaps = 1/553 (0%)
Query: 135 LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
L V +SL+ LY K ++ A K+FDEMP RD ++ N V G +RN + + + M+
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 195 NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
+G D T+ VL + V I LA G+ ++ V L++ Y KCG +
Sbjct: 150 SG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 255 ARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
R +F + ++I A+ISG N E ++LF + +S T + + S
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAM 374
+ I K G S + +AL +YS+ I+ A +F+ + E + +
Sbjct: 269 SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 375 ISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNL 434
+ G QNG E A+ F M+ + ++ L SL GK +H L+ +
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF 388
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKE 494
N +V+ LI+MY+KCG++++++ +F M ++N V+WN++I + HG+G ALKL++E
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 495 MLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG 554
M + P+ VTFLS+L+ACSH GL+ +G E+ ++M + IEP EH+ C++D+LGRAG
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 555 QLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSN 614
L++A FI ++P++P +W LLGAC H +T++ A+E+LF+ P S ++L++N
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIAN 568
Query: 615 IYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEK 674
IYS + + A + K + K G + IEI TH FV D+ H A AIY +L
Sbjct: 569 IYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSG 628
Query: 675 LTGKMREIGYQTE 687
L M + GY+ +
Sbjct: 629 LFPVMVDEGYRPD 641
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 218/473 (46%), Gaps = 19/473 (4%)
Query: 18 PHLAQIH--AQLILNGYQSDLASITKLTQ--KLFDFGATRHARALFFSVRNPDIFLFNVL 73
P A IH A ++ N S A KL KLFD R D+ N++
Sbjct: 80 PVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMR------------DVISQNIV 127
Query: 74 VKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPD-DKYGMLLHAHAIVDGFG 132
GF N S L + T ++ +P+ ++HA AI+ G+
Sbjct: 128 FYGFLRNRETESGFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYD 187
Query: 133 SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDM 192
+ V + L+ YFK R VFD M R+ + VI+GL+ N ++D +++F M
Sbjct: 188 KEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM 247
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
V +S T ++ L A + Q + G I L +K+G + + + L+ +YSKCG I
Sbjct: 248 RRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSI 307
Query: 253 STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVS 312
A +F + D ++ ++ G NG E +++ F +L +G + ++ + ++ VS
Sbjct: 308 EDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVS 367
Query: 313 SPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWN 372
L L + +K N+ V+ L +YS+ ++ ++ +F P++ +WN
Sbjct: 368 FIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWN 427
Query: 373 AMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGK-WVHQLIKS 431
+MI+ + ++G AL L++EM T E P VT + L AC+ +G + G+ ++++ +
Sbjct: 428 SMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEV 487
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGYGLHG 483
+EP T +IDM + G + EA+ DS+ K + W ++ HG
Sbjct: 488 HGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 307 bits (787), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/590 (32%), Positives = 300/590 (50%), Gaps = 50/590 (8%)
Query: 100 APDNYTYA---FTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARK 156
+P+ +T+ + A D G +LHA + GF ++F ++LV +Y K +V A K
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 157 VFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQE 216
V DEMPER + N ++GL+ N + D+ ++F D +G ++S TV +VL +++
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG 147
Query: 217 LGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISG 276
GM + CLA K GF + YV T LVS+YS+CG+ A +F + ++ YNA ISG
Sbjct: 148 ---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 277 YTCNGE---IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
NG + S L R+ S + + T V I + +L + G +K
Sbjct: 205 LMENGVMNLVPSVFNLMRKF--SSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 334 ISNSSVSTALTTIYSRLN------------------------------------EIDMAR 357
+ V TAL +YS+ +++
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 358 KLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
KL E + A WN++ISG++Q G A F+ M++ P+ +T+ LSAC+ +
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIW 382
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK--NTVTWNTI 475
+L GK +H + E +I+V T+LIDMY KCG S AR++FD K + V WN +
Sbjct: 383 TLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVM 442
Query: 476 IFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYR 535
I GYG HG A+++F+ + + PS TF ++L ACSH G V +G +IF M +Y
Sbjct: 443 ISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYG 502
Query: 536 IEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVAS 595
+P EH CM+D+LGR+G+L +A E I M +LLG+C+ H + + A+
Sbjct: 503 YKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAA 561
Query: 596 ERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTL 645
+L EL+P + +V+LS+IY+ + SIR+V +++L K PG +L
Sbjct: 562 MKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 152/339 (44%), Gaps = 41/339 (12%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q+H + +G++ ++ T L G A +F V + + +N + G N
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHAIVDGFGSNLFVC 138
+ +++ +R ++ P++ T+ I A + +YG LH + F V
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPE-RDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGV 197
++L+D+Y K A VF E+ + R+ ++WN+VI+G++ N ++ ++++F + + G+
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 198 QVDSTT-----------------------------------VVTVLPAVAELQELGVGMG 222
+ DS T + ++L A +++ L G
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 223 IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMI-GKP-DLIAYNAMISGYTCN 280
I K RD +VLT L+ +Y KCG S AR +F KP D + +N MISGY +
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKH 449
Query: 281 GEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 319
GE ES++++F L S +T ++ S G++
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVE 488
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 283/608 (46%), Gaps = 79/608 (12%)
Query: 147 KFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVT 206
K R+ AR+VFD MPE DTVAWNT++T R + ++I +F + + + D +
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 207 VLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTAR---------- 256
+L A L + G IQ L + GF V L+ +Y KC D +A
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 257 --------LLFGMIGKPDL---------------IAYNAMISGYTCNGEIESSVKLFREL 293
LLF + A+N MISG+ G++ES + LF+E+
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 294 LVSGQRVSSSTMVGLIPVSSP------FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY 347
L S + T L+ S +G + + +K+G S ++ + Y
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRM-----VHAVMLKNGWSSAVEAKNSVLSFY 250
Query: 348 SRLN-------------------------------EIDMARKLFDESPEKTVAAWNAMIS 376
++L E + A ++F +PEK + W MI+
Sbjct: 251 TKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMIT 310
Query: 377 GYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
GY +NG E AL F EMM + + L AC+ L L GK +H + +
Sbjct: 311 GYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQG 370
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML 496
YV AL+++YAKCG+I EA + F ++ K+ V+WNT++F +G+HG +ALKL+ M+
Sbjct: 371 YAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Query: 497 HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQL 556
SGI P VTF+ +L CSH+GLV EG IF MV YRI +H CM+D+ GR G L
Sbjct: 431 ASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHL 490
Query: 557 EKALEFIRT----MPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLL 612
+A + T + + W TLLGAC H +T++ R S+ L +P +VLL
Sbjct: 491 AEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLL 550
Query: 613 SNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAML 672
SN+Y + + +R +R + KTPGC+ IE+ FV GD SH + L
Sbjct: 551 SNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETL 610
Query: 673 EKLTGKMR 680
L +MR
Sbjct: 611 NCLQHEMR 618
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/578 (23%), Positives = 246/578 (42%), Gaps = 85/578 (14%)
Query: 36 LASITKLTQKLFDF---GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTH 92
++ + +LT K+ G AR +F + D +N ++ +S +IAL+T
Sbjct: 1 MSVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ 60
Query: 93 LRLRTNLAPDNYTYAF---TIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFS 149
LR ++ PD+Y++ T A+ + K+G + + I GF ++L V +SL+D+Y K S
Sbjct: 61 LRF-SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCS 119
Query: 150 RVGLARKVFD---------------------------------EMPERDTVAWNTVITGL 176
A KVF EMP+R AWN +I+G
Sbjct: 120 DTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGH 179
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAV-AELQELGVGMGIQCLAFKFGFHRD 235
+ + +F++M+ + + D T +++ A A+ + G + + K G+
Sbjct: 180 AHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSA 239
Query: 236 AYVLTGLVSLYSK----------------------------C---GDISTARLLFGMIGK 264
++S Y+K C G+ A +F + +
Sbjct: 240 VEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPE 299
Query: 265 PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSI 324
+++ + MI+GY NG+ E +++ F E++ SG ++ S L I
Sbjct: 300 KNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMI 359
Query: 325 QGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLT 384
G + G + V AL +Y++ +I A + F + K + +WN M+ + +GL
Sbjct: 360 HGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLA 419
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ-LIKSKNLEPNIYVSTA 443
+ AL L+ M+ + P+ VT L+ C+ G + G + + ++K + + T
Sbjct: 420 DQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTC 479
Query: 444 LIDMYAKCGNISEARQLFDSMS-----EKNTVTWNTIIFGYGLHGY---GHEALKLFKEM 495
+IDM+ + G+++EA+ L + S N +W T++ H + G E K+ K
Sbjct: 480 MIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLK-- 537
Query: 496 LHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
+ LS LY CS G +EGE++ +MV +
Sbjct: 538 IAEPSEEMSFVLLSNLY-CS-TGRWKEGEDVRREMVER 573
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 189/418 (45%), Gaps = 67/418 (16%)
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
LT ++ +K G I++AR +F + + D +A+N M++ Y+ G + ++ LF +L S
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+ + ++ + G++ IQ ++SG ++ V+ +L +Y + ++ A K
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 359 LFD---------------------------------ESPEKTVAAWNAMISGYTQNGLTE 385
+F E P++ AWN MISG+ G E
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 386 TALSLFQEMMTTEFTPNPVTITTTLSAC-AQLGSLSFGKWVHQL---------IKSKNLE 435
+ LSLF+EM+ +EF P+ T ++ ++AC A ++ +G+ VH + +++KN
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 436 PNIYVS----------------------TALIDMYAKCGNISEARQLFDSMSEKNTVTWN 473
+ Y ++ID K G +A ++F EKN VTW
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
T+I GYG +G G +AL+ F EM+ SG+ + ++L+ACS L+ G+ I H +
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMI-HGCLIH 365
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIA 591
+ A +V++ + G +++A + W T+L A +H D A
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI-ANKDLVSWNTMLFAFGVHGLADQA 422
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 16 NLPHLAQIHAQLILNGYQS-----------------------DLASITKLTQKLFD---- 48
N+ + +HA ++ NG+ S +L SI LTQ ++
Sbjct: 220 NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIID 279
Query: 49 ----FGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNY 104
G T A +F +I + ++ G+ N ++ + + +++ + D++
Sbjct: 280 ACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM-MKSGVDSDHF 338
Query: 105 TYAFTIAASPDDK---YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEM 161
Y + A +G ++H I GF +V ++LV+LY K + A + F ++
Sbjct: 339 AYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI 398
Query: 162 PERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAE--LQELGV 219
+D V+WNT++ + D +++++ +M+A+G++ D+ T + +L + L E G
Sbjct: 399 ANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGC 458
Query: 220 GMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
M + + + + +T ++ ++ + G ++ A+ L
Sbjct: 459 -MIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 273/542 (50%), Gaps = 42/542 (7%)
Query: 148 FSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTV 207
F R+ LA +M E + +N + G V + S++++ M+ + V S T ++
Sbjct: 818 FKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSL 877
Query: 208 LPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDL 267
+ A + G + F FGFH + T L+ YS G I AR +F + + D
Sbjct: 878 VKASSFASRFGESLQAHIWKFGFGFH--VKIQTTLIDFYSATGRIREARKVFDEMPERDD 935
Query: 268 IAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGY 327
IA+ M+S Y +++S+ L ++
Sbjct: 936 IAWTTMVSAYRRVLDMDSANSLANQM---------------------------------- 961
Query: 328 CVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETA 387
+ N + S L Y L ++ A LF++ P K + +W MI GY+QN A
Sbjct: 962 -----SEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREA 1016
Query: 388 LSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDM 447
+++F +MM P+ VT++T +SACA LG L GK VH ++Y+ +AL+DM
Sbjct: 1017 IAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDM 1076
Query: 448 YAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
Y+KCG++ A +F ++ +KN WN+II G HG+ EALK+F +M + P+ VTF
Sbjct: 1077 YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF 1136
Query: 508 LSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP 567
+S+ AC+HAGLV EG I+ M++ Y I EH+ MV + +AG + +ALE I M
Sbjct: 1137 VSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNME 1196
Query: 568 VEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAAS 627
EP +WG LL C+IHKN IA +A +L L+P + GYY LL ++Y+ + A
Sbjct: 1197 FEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAE 1256
Query: 628 IREVAKKRKLAKT-PGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQT 686
IR ++ + K PG + I I+ H+F + D+SHS + + +L+++ +M GY
Sbjct: 1257 IRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 1316
Query: 687 ET 688
ET
Sbjct: 1317 ET 1318
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 221/476 (46%), Gaps = 44/476 (9%)
Query: 11 INKACNLPHLAQIH-AQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFL 69
I K C+ P L + A +I D + + F A + ++ P++F+
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFV 838
Query: 70 FNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP-DDKYGMLLHAHAIV 128
+N L KGF + P S+ LY + LR +++P +YTY+ + AS ++G L AH
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRM-LRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWK 897
Query: 129 DGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQV 188
GFG ++ + ++L+D Y R+ ARKVFDEMPERD +AW T+++ R D +
Sbjct: 898 FGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSA--- 954
Query: 189 FRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSK 248
+ +AN + ++ L++ Y
Sbjct: 955 --NSLANQMS----------------------------------EKNEATSNCLINGYMG 978
Query: 249 CGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGL 308
G++ A LF + D+I++ MI GY+ N ++ +F +++ G TM +
Sbjct: 979 LGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 309 IPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTV 368
I + G L + + Y +++G + + + +AL +YS+ ++ A +F P+K +
Sbjct: 1039 ISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNL 1098
Query: 369 AAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ- 427
WN++I G +G + AL +F +M PN VT + +AC G + G+ +++
Sbjct: 1099 FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRS 1158
Query: 428 LIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLH 482
+I ++ N+ ++ +++K G I EA +L +M E N V W ++ G +H
Sbjct: 1159 MIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH 1214
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 306 bits (783), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 187/625 (29%), Positives = 318/625 (50%), Gaps = 11/625 (1%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
+ A++I G + D+ T + G A +F + NP + + V++ G++ +
Sbjct: 273 VQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSND 331
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLLHAHAIVDGFGSNLFVCS 139
S++ ++ +R + + +N T I+A +HA GF + V +
Sbjct: 332 AFSALEIFKEMR-HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA 390
Query: 140 SLVDLYFKFSRVGLARKVFDEMP--ERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGV 197
+L+ +Y K + L+ +VF+++ +R + N +IT ++ +I++F M+ G+
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGL 449
Query: 198 QVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARL 257
+ D +V ++L L L +G + K G D V + L +LYSKCG + +
Sbjct: 450 RTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 258 LFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGH 317
LF I D + +MISG+ G + ++ LF E+L G ST+ ++ V S
Sbjct: 507 LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 318 LHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISG 377
L I GY +++G + +AL +YS+ + +AR+++D PE + +++ISG
Sbjct: 567 LPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISG 626
Query: 378 YTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPN 437
Y+Q+GL + LF++M+ + FT + I++ L A A S G VH I L
Sbjct: 627 YSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTE 686
Query: 438 IYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH 497
V ++L+ MY+K G+I + + F ++ + + W +I Y HG +EAL+++ M
Sbjct: 687 PSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKE 746
Query: 498 SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLE 557
G P VTF+ +L ACSH GLV E + MV Y IEP H+ CMVD LGR+G+L
Sbjct: 747 KGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLR 806
Query: 558 KALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYS 617
+A FI M ++P VWGTLL ACKIH ++ +VA+++ EL+P G Y+ LSNI +
Sbjct: 807 EAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILA 866
Query: 618 VGRNFPKAASIREVAKKRKLAKTPG 642
+ + R++ K + K PG
Sbjct: 867 EVGEWDEVEETRKLMKGTGVQKEPG 891
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 152/555 (27%), Positives = 275/555 (49%), Gaps = 21/555 (3%)
Query: 42 LTQKLFDF----GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRT 97
LT+ L + G+ A LF ++ PD+ N+++ G+ + S+ ++ +
Sbjct: 86 LTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF-L 144
Query: 98 NLAPDNYTYAFTIAASPDDK---YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLA 154
+ +Y I+A + + L+ H I G+ V S+L+D++ K R A
Sbjct: 145 GFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDA 204
Query: 155 RKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAEL 214
KVF + + WNT+I G +RN Y +F +M + DS T +VL A A L
Sbjct: 205 YKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASL 264
Query: 215 QELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMI 274
++L G +Q K G D +V T +V LY+KCG ++ A +F I P ++++ M+
Sbjct: 265 EKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323
Query: 275 SGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC---SIQGYCVKS 331
SGYT + + S++++F+E+ SG +++ T+ +I S G + C + + KS
Sbjct: 324 SGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVI---SACGRPSMVCEASQVHAWVFKS 380
Query: 332 GAISNSSVSTALTTIYSRLNEIDMARKLFDESPE-KTVAAWNAMISGYTQNGLTETALSL 390
G +SSV+ AL ++YS+ +ID++ ++F++ + + N MI+ ++Q+ A+ L
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRL 440
Query: 391 FQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAK 450
F M+ + ++ + LS L L+ GK VH L ++ V ++L +Y+K
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSK 497
Query: 451 CGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSI 510
CG++ E+ +LF + K+ W ++I G+ +GY EA+ LF EML G P T ++
Sbjct: 498 CGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557
Query: 511 LYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEP 570
L CS + G+EI H + I+ + + +V++ + G L+ A + +P E
Sbjct: 558 LTVCSSHPSLPRGKEI-HGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-EL 615
Query: 571 GPAVWGTLLGACKIH 585
P +L+ H
Sbjct: 616 DPVSCSSLISGYSQH 630
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 208/451 (46%), Gaps = 15/451 (3%)
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
++F+ SL+ Y + A K+FD +P+ D V+ N +I+G ++ +++S++ F M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 194 ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIS 253
G + + + +V+ A + LQ + C K G+ V + L+ ++SK
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 254 TARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS 313
A +F ++ +N +I+G N + LF E+ V Q+ S T ++ +
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 314 PFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNA 373
L +Q +K GA + V TA+ +Y++ + A ++F P +V +W
Sbjct: 263 SLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 374 MISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN 433
M+SGYT++ +AL +F+EM + N T+T+ +SAC + + VH +
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 434 LEPNIYVSTALIDMYAKCGNISEARQLF---DSMSEKNTVTWNTIIFGYGLHGYGHEALK 490
+ V+ ALI MY+K G+I + Q+F D + +N V N +I + +A++
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIR 439
Query: 491 LFKEMLHSGIHPSGVTFLSILYA--CSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVD 548
LF ML G+ + S+L C + G G + +V + + +
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTV------GSSLFT 493
Query: 549 ILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
+ + G LE++ + + +P + A W +++
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDN-ACWASMI 523
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 119/285 (41%), Gaps = 8/285 (2%)
Query: 6 SIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNP 65
+++T + +LP +IH + G + + L G+ + AR ++ +
Sbjct: 556 AVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPEL 615
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGMLL 122
D + L+ G+S + L+ + + + D++ + + A S + G +
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDMVM-SGFTMDSFAISSILKAAALSDESSLGAQV 674
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
HA+ G + V SSL+ +Y KF + K F ++ D +AW +I ++
Sbjct: 675 HAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKA 734
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAE--LQELGVGMGIQCLAFKFGFHRDAYVLT 240
++++QV+ M G + D T V VL A + L E + + +G +
Sbjct: 735 NEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY-FHLNSMVKDYGIEPENRHYV 793
Query: 241 GLVSLYSKCGDISTAR-LLFGMIGKPDLIAYNAMISGYTCNGEIE 284
+V + G + A + M KPD + + +++ +GE+E
Sbjct: 794 CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 185/660 (28%), Positives = 314/660 (47%), Gaps = 37/660 (5%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
I A +I G ++ + DF A +F + +I + +V G++ +
Sbjct: 27 IQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGK 86
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHAIVDGFGSNLFVCS 139
P+ +I LY + A + + Y+ + A D + G+L++ + ++ + +
Sbjct: 87 PNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMN 146
Query: 140 SLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA----- 194
S+VD+Y K R+ A F E+ + +WNT+I+G + D+++ +F M
Sbjct: 147 SVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVS 206
Query: 195 -------------------------NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFK 229
G+ +D + L A + L +G + C K
Sbjct: 207 WNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVK 266
Query: 230 FGFHRDAYVLTGLVSLYSKCGDISTARLLF---GMIGKPDLIAYNAMISGYTCNGEIESS 286
G + ++ L+ +YS CG + A +F + + +N+M+SG+ N E E++
Sbjct: 267 SGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAA 326
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
+ L ++ S S T+ G + + + +L L + V SG + V + L +
Sbjct: 327 LWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDL 386
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
++ + I A KLF P K + A++ +I G ++G A LF+E++ + +
Sbjct: 387 HANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIV 446
Query: 407 TTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE 466
+ L C+ L SL +GK +H L K E +TAL+DMY KCG I LFD M E
Sbjct: 447 SNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLE 506
Query: 467 KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
++ V+W II G+G +G EA + F +M++ GI P+ VTFL +L AC H+GL+ E
Sbjct: 507 RDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARST 566
Query: 527 FHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHK 586
M ++Y +EP EH+ C+VD+LG+AG ++A E I MP+EP +W +LL AC HK
Sbjct: 567 LETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHK 626
Query: 587 NTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLI 646
N + V +E+L + P Y LSN Y+ + + + +RE AKK AK G + I
Sbjct: 627 NAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 141/576 (24%), Positives = 249/576 (43%), Gaps = 76/576 (13%)
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
K G + AH I G N+F+ ++++ +Y F + A KVFDEM ER+ V W T+++G
Sbjct: 22 KRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGY 81
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVT-VLPAVAELQELGVGMGIQCLAFKFGFHRD 235
+ + +I+++R M+ + + + + + VL A + ++ +G+ + K D
Sbjct: 82 TSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGD 141
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
++ +V +Y K G + A F I +P ++N +ISGY G ++ +V LF +
Sbjct: 142 VVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQ 201
Query: 296 SGQRVSSSTMVGLIPVSSP-----------------------------FGHLHLTCSIQG 326
+ + G + SP FG L LT Q
Sbjct: 202 PNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGL-LTMGKQL 260
Query: 327 YC--VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP---EKTVAAWNAMISGYTQN 381
+C VKSG S+ +AL +YS + A +F + +VA WN+M+SG+ N
Sbjct: 261 HCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLIN 320
Query: 382 GLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVS 441
E AL L ++ ++ + T++ L C +L G VH L+ E + V
Sbjct: 321 EENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVG 380
Query: 442 TALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIH 501
+ L+D++A GNI +A +LF + K+ + ++ +I G G+ A LF+E++ G+
Sbjct: 381 SILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLD 440
Query: 502 PSGVTFLSILYACSHAGLVREGEEIFHDMVNK-YRIEPLAEHHACMVDI----------- 549
+IL CS + G++I + K Y EP+ +VD+
Sbjct: 441 ADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--TALVDMYVKCGEIDNGV 498
Query: 550 --------------------LGRAGQLEKALEFIRTM---PVEPGPAVWGTLLGACKIHK 586
G+ G++E+A + M +EP + LL AC+
Sbjct: 499 VLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSG 558
Query: 587 NTDIARVASERL---FELDPGSVGYYVLLSNIYSVG 619
+ AR E + + L+P YY ++ + G
Sbjct: 559 LLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAG 594
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 217/475 (45%), Gaps = 51/475 (10%)
Query: 13 KACNLPHL----AQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR---NP 65
KAC+ L Q+H ++ +G +S +I+ L + G+ +A +F + N
Sbjct: 246 KACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLL 122
+ ++N ++ GF +N +++ L + +++L D+YT + + + + G+ +
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQI-YQSDLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY 182
H+ +V G+ + V S LVDL+ + A K+F +P +D +A++ +I G V++ +
Sbjct: 365 HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFN 424
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
+ +FR+++ G+ D V +L + L LG G I L K G+ + T L
Sbjct: 425 SLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATAL 484
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
V +Y KCG+I +LF + + D++++ +I G+ NG +E + + F +++ G +
Sbjct: 485 VDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNK 544
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
T +GL+ C SG + + + L T+ S +
Sbjct: 545 VTFLGLLSA----------------CRHSGLLEEA--RSTLETMKS------------EY 574
Query: 363 SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG 422
E + + ++ Q GL + A L +M P+ T+ L+AC +
Sbjct: 575 GLEPYLEHYYCVVDLLGQAGLFQEANELINKM---PLEPDKTIWTSLLTACGTHKNAGLV 631
Query: 423 KWV-HQLIKSKNLEPNIYVSTALIDMYAKCG---NISEARQLFDSMSEKNT-VTW 472
+ +L+K +P++Y T+L + YA G +S+ R+ + K + ++W
Sbjct: 632 TVIAEKLLKGFPDDPSVY--TSLSNAYATLGMWDQLSKVREAAKKLGAKESGMSW 684
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 191/422 (45%), Gaps = 41/422 (9%)
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
+D + L ++Q G IQ K G ++ ++ ++S+Y +S A +
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 259 FGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM----------VGL 308
F + + +++ + M+SGYT +G+ +++L+R +L S + ++ M VG
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 309 IPV----------SSPFGHLHLTCSIQGYCVKSGAI--SNSSV-------STALTTI--- 346
I + + G + L S+ VK+G + +NSS ST+ T+
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
Y + +D A LF P+ V +WN +ISG+ G + AL M + +
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFAL 241
Query: 407 TTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF--DSM 464
L AC+ G L+ GK +H + LE + + +ALIDMY+ CG++ A +F + +
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKL 301
Query: 465 SEKNTV-TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREG 523
+ ++V WN+++ G+ ++ AL L ++ S + T L C + +R G
Sbjct: 302 AVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLG 361
Query: 524 EEIFHDM--VNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
++ H + V+ Y ++ + + +VD+ G ++ A + +P + A G + G
Sbjct: 362 LQV-HSLVVVSGYELDYIV--GSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGC 418
Query: 582 CK 583
K
Sbjct: 419 VK 420
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 186/684 (27%), Positives = 334/684 (48%), Gaps = 104/684 (15%)
Query: 22 QIHAQLILNGYQSDLASITK-LTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVN 80
Q + L+ G+ S + + L Q G AR LF + + + F +N +++G+ +
Sbjct: 47 QTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNS 106
Query: 81 ASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSS 140
+S+ + ++ P+ Y++ + +V GF
Sbjct: 107 GEKGTSLRFF-------DMMPERDGYSWNV----------------VVSGFA-------- 135
Query: 141 LVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVD 200
K + +AR++F+ MPE+D V N+++ G + N Y ++++++F+++ D
Sbjct: 136 ------KAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSAD 186
Query: 201 STTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFG 260
+ T+ TVL A AEL+ L G I G D+ + + LV++Y+KCGD+ A +
Sbjct: 187 AITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLE 246
Query: 261 MIGKPD-------------------------------LIAYNAMISGYTCNGEIESSVKL 289
I +PD +I +N+MISGY N ++ L
Sbjct: 247 QIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVL 306
Query: 290 FRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSR 349
F E+ + R S T+ +I G L + + K G I + V++ L +YS+
Sbjct: 307 FNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSK 365
Query: 350 ---------------------LN----------EIDMARKLFDESPEKTVAAWNAMISGY 378
LN ID A+++F+ K++ +WN+M +G+
Sbjct: 366 CGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGF 425
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
+QNG T L F +M + + V++++ +SACA + SL G+ V L+ +
Sbjct: 426 SQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQ 485
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHS 498
VS++LID+Y KCG + R++FD+M + + V WN++I GY +G G EA+ LFK+M +
Sbjct: 486 VVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVA 545
Query: 499 GIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEK 558
GI P+ +TF+ +L AC++ GLV EG ++F M + P EH +CMVD+L RAG +E+
Sbjct: 546 GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEE 605
Query: 559 ALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSV 618
A+ + MP + ++W ++L C + + + A+E++ EL+P + YV LS I++
Sbjct: 606 AINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFAT 665
Query: 619 GRNFPKAASIREVAKKRKLAKTPG 642
++ +A +R++ ++ + K PG
Sbjct: 666 SGDWESSALVRKLMRENNVTKNPG 689
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 297/551 (53%), Gaps = 8/551 (1%)
Query: 16 NLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVK 75
+L H Q+H + +NG +S+ TKL G+ + A+ +F + +++ +N L++
Sbjct: 126 SLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLR 185
Query: 76 GFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT-----IAASPDDKYGMLLHAHAIVDG 130
G ++ L T +R L D Y+ + A + + G+ HA AI +G
Sbjct: 186 GTVISGKKRYQDVLSTFTEMR-ELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNG 244
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFR 190
+++F+ +SLVD+YFK +VGLAR+VFDE+ ERD V W +I GL N +++ +FR
Sbjct: 245 LFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFR 304
Query: 191 DMVAN-GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF-GFHRDAYVLTGLVSLYSK 248
M++ + +S + T+LP + +++ L +G + K + +V +GL+ LY K
Sbjct: 305 TMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCK 364
Query: 249 CGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGL 308
CGD+++ R +F + + I++ A++SGY NG + +++ + G R T+ +
Sbjct: 365 CGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATV 424
Query: 309 IPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTV 368
+PV + + I Y +K+ + N S+ T+L +YS+ + +LFD ++ V
Sbjct: 425 LPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNV 484
Query: 369 AAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQL 428
AW AMI Y +N + +F+ M+ ++ P+ VT+ L+ C+ L +L GK +H
Sbjct: 485 KAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGH 544
Query: 429 IKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEA 488
I K E +VS +I MY KCG++ A FD+++ K ++TW II YG + +A
Sbjct: 545 ILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDA 604
Query: 489 LKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVD 548
+ F++M+ G P+ TF ++L CS AG V E F+ M+ Y ++P EH++ +++
Sbjct: 605 INCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIE 664
Query: 549 ILGRAGQLEKA 559
+L R G++E+A
Sbjct: 665 LLNRCGRVEEA 675
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 215/444 (48%), Gaps = 5/444 (1%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
+ HA I NG + + T L F G AR +F + DI ++ ++ G + N
Sbjct: 235 KTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNK 294
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK---YGMLLHAHAI-VDGFGSNLFV 137
++ L+ + + P++ + D K G +HAH + + FV
Sbjct: 295 RQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFV 354
Query: 138 CSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGV 197
S L+DLY K + R+VF +R+ ++W +++G N +D +++ M G
Sbjct: 355 HSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGF 414
Query: 198 QVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARL 257
+ D T+ TVLP AEL+ + G I C A K F + ++T L+ +YSKCG
Sbjct: 415 RPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIR 474
Query: 258 LFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGH 317
LF + + ++ A+ AMI Y N ++ + +++FR +L+S R S TM ++ V S
Sbjct: 475 LFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKA 534
Query: 318 LHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISG 377
L L + G+ +K S VS + +Y + ++ A FD K W A+I
Sbjct: 535 LKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEA 594
Query: 378 YTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEP 436
Y N L A++ F++M++ FTPN T T LS C+Q G + ++ + +++ NL+P
Sbjct: 595 YGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQP 654
Query: 437 NIYVSTALIDMYAKCGNISEARQL 460
+ + +I++ +CG + EA++L
Sbjct: 655 SEEHYSLVIELLNRCGRVEEAQRL 678
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 169/335 (50%), Gaps = 4/335 (1%)
Query: 196 GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA 255
G+ V++TT +L A + L G + G + ++ T LV +Y+ CG + A
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165
Query: 256 RLLFGMIGKPDLIAYNAMISGYTCNGE--IESSVKLFRELLVSGQRVSSSTMVGLIPVSS 313
+ +F ++ ++NA++ G +G+ + + F E+ G ++ ++ + +
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFA 225
Query: 314 PFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNA 373
L +K+G ++ + T+L +Y + ++ +AR++FDE E+ + W A
Sbjct: 226 GASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGA 285
Query: 374 MISGYTQNGLTETALSLFQEMMTTE-FTPNPVTITTTLSACAQLGSLSFGKWVH-QLIKS 431
MI+G N AL LF+ M++ E PN V +TT L + +L GK VH ++KS
Sbjct: 286 MIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKL 491
KN +V + LID+Y KCG+++ R++F ++N ++W ++ GY +G +AL+
Sbjct: 346 KNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRS 405
Query: 492 FKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
M G P VT ++L C+ +++G+EI
Sbjct: 406 IVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 380 QNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIY 439
QN L E AL++ + N T + L AC + SL GK VH I+ LE N +
Sbjct: 89 QNNL-EVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYG--HEALKLFKEMLH 497
+ T L+ MY CG++ +A+++FD + N +WN ++ G + G + L F EM
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 498 SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLE 557
G+ + + ++ + + A +R+G + H + K + +VD+ + G++
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKT-HALAIKNGLFNSVFLKTSLVDMYFKCGKVG 266
Query: 558 KALEFIRTMPVEPGPAVWGTLLGA 581
A + VE VWG ++
Sbjct: 267 LARRVFDEI-VERDIVVWGAMIAG 289
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/629 (29%), Positives = 327/629 (51%), Gaps = 13/629 (2%)
Query: 59 FFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY 118
F + + D +NV+V G + ++ LR+ P+ T I A +
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV-WGFEPNTSTLVLVIHACRSLWF 142
Query: 119 -GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
G +H + I GF V +S++ +Y + ARK+FDEM ERD ++W+ VI V
Sbjct: 143 DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYV 201
Query: 178 RNCYYDDSIQVFRDMVANG-VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH-RD 235
++ +++F++MV + D TV +VL A ++++ VG + + + GF D
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
+V L+ +YSK D+ +A +F +++++N++++G+ N + ++++F ++
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ 321
Query: 296 SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDM 355
V T+V L+ V F SI G ++ G SN ++L Y+ + +D
Sbjct: 322 EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDD 381
Query: 356 ARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQ 415
A + D K V + + MISG G ++ A+S+F M T PN +T+ + L+AC+
Sbjct: 382 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSV 438
Query: 416 LGSLSFGKWVHQLIKSKNLEPN-IYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNT 474
L KW H + ++L N I V T+++D YAKCG I AR+ FD ++EKN ++W
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTV 498
Query: 475 IIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKY 534
II Y ++G +AL LF EM G P+ VT+L+ L AC+H GLV++G IF MV +
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED 558
Query: 535 RIEPLAEHHACMVDILGRAGQLEKALEFIRTMP--VEPGPAVWGTLLGACKIH-KNTDIA 591
+P +H++C+VD+L RAG+++ A+E I+ +P V+ G + WG +L C+ K I
Sbjct: 559 H-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIIT 617
Query: 592 RVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGT 651
+ EL+P Y+L S+ ++ +++ A +R + K+RK+ G +++
Sbjct: 618 SEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNL 677
Query: 652 THVFVSGDRSHSHATAIYAMLEKLTGKMR 680
F++GD+ + + +++ L M+
Sbjct: 678 AKRFLAGDKLSQSDSELNDVVQSLHRCMK 706
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 198/391 (50%), Gaps = 8/391 (2%)
Query: 133 SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDM 192
S LF +S+ D Y K + + FD M RD+V+WN ++ GL+ + ++ + F +
Sbjct: 59 SWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKL 118
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
G + +++T+V V+ A L G I + GF + V ++ +Y+ +
Sbjct: 119 RVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL 176
Query: 253 STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ-RVSSSTMVGLIPV 311
S AR LF + + D+I+++ +I Y + E +KLF+E++ + T+ ++
Sbjct: 177 S-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKA 235
Query: 312 SSPFGHLHLTCSIQGYCVKSG-AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA 370
+ + + S+ G+ ++ G +++ V +L +YS+ ++D A ++FDE+ + + +
Sbjct: 236 CTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVS 295
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIK 430
WN++++G+ N + AL +F M+ + VT+ + L C K +H +I
Sbjct: 296 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 431 SKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALK 490
+ E N ++LID Y C + +A + DSM+ K+ V+ +T+I G G EA+
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 491 LFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
+F M + P+ +T +S+L ACS + +R
Sbjct: 416 IFCHMRDT---PNAITVISLLNACSVSADLR 443
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 145/358 (40%), Gaps = 35/358 (9%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
IH +I GY+S+ +++ L A + S+ D+ + ++ G +
Sbjct: 350 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR 409
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSN-LFVCSSL 141
+I+++ H+R N A + + S D + H AI N + V +S+
Sbjct: 410 SDEAISIFCHMRDTPN-AITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSI 468
Query: 142 VDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDS 201
VD Y K + +AR+ FD++ E++ ++W +I+ N D ++ +F +M G ++
Sbjct: 469 VDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNA 528
Query: 202 TTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGM 261
T + L A + G+ I FK D
Sbjct: 529 VTYLAALSACNHGGLVKKGLMI----FKSMVEEDH------------------------- 559
Query: 262 IGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLT 321
KP L Y+ ++ + GEI+++V+L + L + +S+ L + F L +T
Sbjct: 560 --KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIIT 617
Query: 322 CSIQGYCVKSGAISNSSVSTALTTIYSR--LNEIDMARKLFDESPEKTVAAWNAMISG 377
+ ++ + +S A +T + ++ M R+L E + VA ++ + G
Sbjct: 618 SEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREG 675
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 33/156 (21%)
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIK 430
W ++SGY++ + +F +P ACA+L W+ Q
Sbjct: 25 WREVVSGYSE-----------IQRAGVQFN-DPFVFPIVFKACAKLS------WLFQ--- 63
Query: 431 SKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALK 490
++ D Y KCG++ + FD M+ +++V+WN I+FG +G+ E L
Sbjct: 64 ----------GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 491 LFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
F ++ G P+ T + +++AC L +GE+I
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHACR--SLWFDGEKI 147
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 296 bits (758), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 174/545 (31%), Positives = 291/545 (53%), Gaps = 31/545 (5%)
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFS-RVGLARKVFDEMPERDTVAWNTVITGL 176
+G+ HAH + G ++ V +SL+ LYFK + R+VFD +D ++W ++++G
Sbjct: 79 HGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGY 138
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
V + +++VF +MV+ G+ + T+ + + A +EL E+ +G + GF +
Sbjct: 139 VTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNH 198
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
++ + L LY + AR +F + +PD+I + A++S ++ N E ++ LF +
Sbjct: 199 FISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM--- 255
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCS----------IQGYCVKSGAISNSSVSTALTTI 346
GL+P S FG + C I G + +G SN V ++L +
Sbjct: 256 ------HRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDM 309
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
Y + + AR++F+ +K +W+A++ GY QNG E A+ +F+EM +
Sbjct: 310 YGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCF 365
Query: 407 TTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE 466
T L ACA L ++ GK +H + N+ V +ALID+Y K G I A +++ MS
Sbjct: 366 GTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI 425
Query: 467 KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
+N +TWN ++ +G G EA+ F +M+ GI P ++F++IL AC H G+V EG
Sbjct: 426 RNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNY 485
Query: 527 FHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHK 586
F M Y I+P EH++CM+D+LGRAG E+A + ++WG LLG C
Sbjct: 486 FVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA--A 543
Query: 587 NTDIARVA---SERLFELDPGSVGYYVLLSNIY-SVGRNFPKAASIREVAKKRKLAKTPG 642
N D +RVA ++R+ EL+P YVLLSN+Y ++GR+ A +IR++ +R +AKT G
Sbjct: 544 NADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRH-GDALNIRKLMVRRGVAKTVG 602
Query: 643 CTLIE 647
+ I+
Sbjct: 603 QSWID 607
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 219/479 (45%), Gaps = 11/479 (2%)
Query: 6 SIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFG-ATRHARALFFSVRN 64
S++ NK + H Q HA ++ +G ++D L F G R R +F
Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFV 125
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGML 121
D + ++ G+ ++ ++ + + L + +T + + A + + G
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEM-VSFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
H I GF N F+ S+L LY AR+VFDEMPE D + W V++ +N
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 182 YDDSIQVFRDM-VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLT 240
Y++++ +F M G+ D +T TVL A L+ L G I G + V +
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 241 GLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRV 300
L+ +Y KCG + AR +F + K + ++++A++ GY NGE E ++++FRE+ +
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEK 360
Query: 301 SSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF 360
++ + + L I G V+ G N V +AL +Y + ID A +++
Sbjct: 361 DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 361 DESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLS 420
+ + + WNAM+S QNG E A+S F +M+ P+ ++ L+AC G +
Sbjct: 421 SKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
Query: 421 FGKWVHQLI-KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFG 478
G+ L+ KS ++P + +ID+ + G EA L + +N + ++ G
Sbjct: 481 EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 190/626 (30%), Positives = 305/626 (48%), Gaps = 97/626 (15%)
Query: 109 TIAASPDDKYGMLLHAHAIVDGFGSNLFVCSS---------------------------- 140
+ A+S D G +H + G SN ++C+S
Sbjct: 50 SCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSAS 109
Query: 141 ---LVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGV 197
+VD Y + R+ A K+FD MPER V++ T+I G +N + +++++FR+M G+
Sbjct: 110 FNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGI 169
Query: 198 QVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARL 257
++ T+ TV+ A + L + +Q LA K +V T L+ +Y C + AR
Sbjct: 170 MLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARK 229
Query: 258 LFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFR-------------------------- 291
LF + + +L+ +N M++GY+ G IE + +LF
Sbjct: 230 LFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEA 289
Query: 292 -----ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG-------------- 332
E+L G + S MV L+ S+ + G VK G
Sbjct: 290 LVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHF 349
Query: 333 -AISNS----------------SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
A+SN + AL + + ++ AR++FD++ +K + +WNAMI
Sbjct: 350 YAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMI 409
Query: 376 SGYTQNGLTETALSLFQEMMTT-EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNL 434
SGY Q+ + AL LF+EM+++ + P+ +T+ + SA + LGSL GK H + +
Sbjct: 410 SGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTI 469
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLF---DSMSEKNTVTWNTIIFGYGLHGYGHEALKL 491
PN ++ A+IDMYAKCG+I A +F ++S WN II G HG+ AL L
Sbjct: 470 PPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDL 529
Query: 492 FKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILG 551
+ ++ I P+ +TF+ +L AC HAGLV G+ F M + + IEP +H+ CMVD+LG
Sbjct: 530 YSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLG 589
Query: 552 RAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVL 611
+AG+LE+A E I+ MPV+ +WG LL A + H N +IA +A+ L +DP G V+
Sbjct: 590 KAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVM 649
Query: 612 LSNIYSVGRNFPKAASIREVAKKRKL 637
LSN+Y+ + A +RE + R +
Sbjct: 650 LSNVYADAGRWEDVALVREEMRTRDV 675
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 66/280 (23%)
Query: 398 EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
E + + + L +CA ++ G+ +H + L+ N Y+ ++++MYAKC +++A
Sbjct: 36 ESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADA 95
Query: 458 R-------------------------------QLFDSMSEKNTVTWNTIIFGYGLHGYGH 486
+LFD M E++ V++ T+I GY +
Sbjct: 96 ESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 155
Query: 487 EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLA------ 540
EA++LF+EM + GI + VT +++ ACSH G + + + + K ++E
Sbjct: 156 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC-RMLQSLAIKLKLEGRVFVSTNL 214
Query: 541 EHHAC-------------------------MVDILGRAGQLEKALEFIRTMPVEPGPAVW 575
H C M++ +AG +E+A E + E W
Sbjct: 215 LHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI-TEKDIVSW 273
Query: 576 GTLLGACKIHKNTDIARVASERLFE--LDPGSVGYYVLLS 613
GT++ C D A V + + P V LLS
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLS 313
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 10/258 (3%)
Query: 36 LASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRL 95
+AS L G AR +F + DIF +N ++ G++ + SP ++ L+ +
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 96 RTNLAPDNYTYA---FTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVG 152
+ + PD T I++ + G H + N + ++++D+Y K +
Sbjct: 431 SSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIE 490
Query: 153 LARKVFDE---MPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLP 209
A +F + + WN +I G + + ++ ++ D+ + ++ +S T V VL
Sbjct: 491 TALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLS 550
Query: 210 AV--AELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTAR-LLFGMIGKPD 266
A A L ELG + + G D +V L K G + A+ ++ M K D
Sbjct: 551 ACCHAGLVELGKTY-FESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKAD 609
Query: 267 LIAYNAMISGYTCNGEIE 284
++ + ++S +G +E
Sbjct: 610 VMIWGMLLSASRTHGNVE 627
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/661 (30%), Positives = 334/661 (50%), Gaps = 22/661 (3%)
Query: 17 LPHLAQIHAQLILNGYQSDLASI---TKLTQKLFDFGATRHARALFFSVRNPDIFLFNVL 73
L QIHA ++ G + S L G+ AR +F + + ++ +N L
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNAL 169
Query: 74 VKGFSVNASPSS-SIALYTHLRLRTNLAPDNYTYAFTI---AASPDDKYGMLLHAHAIVD 129
+S N +S + L TH+ + P++ T+ + A D G L++ I
Sbjct: 170 YSAYSRNPDFASYAFPLTTHMAFEY-VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKL 228
Query: 130 GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVF 189
G+ N+ V +S++ +Y + AR++FD + RD VAWNT+I G ++N +D + F
Sbjct: 229 GYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFF 288
Query: 190 RDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKC 249
R+M+ +GV T VL ++L +G I D + L+ +Y C
Sbjct: 289 RNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSC 348
Query: 250 GDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL-VSGQRVSSSTMVGL 308
GD+ A +FG I P+L+++N++ISG + NG E ++ ++R LL +S R T
Sbjct: 349 GDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408
Query: 309 IPVSSP---FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPE 365
I ++ F H L + G K G + V T L ++Y + E + A+K+FD E
Sbjct: 409 ISATAEPERFVHGKL---LHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKE 465
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
+ V W MI G+++ G +E A+ F EM + + ++++ + AC+ + L G+
Sbjct: 466 RDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVF 525
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYG 485
H L + + V AL+DMY K G A +F S + WN+++ Y HG
Sbjct: 526 HCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMV 585
Query: 486 HEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHAC 545
+AL F+++L +G P VT+LS+L ACSH G +G+ +++ M + I+ +H++C
Sbjct: 586 EKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSC 644
Query: 546 MVDILGRAGQLEKALEFIRTMPVEPG---PAVWGTLLGACKIHKNTDIARVASERLFELD 602
MV+++ +AG +++ALE I P PG +W TLL AC +N I A+E++ +LD
Sbjct: 645 MVNLVSKAGLVDEALELIEQSP--PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLD 702
Query: 603 PGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEI-NGTTHVFVSGDRS 661
P ++LLSN+Y+V + A +R + +K PG + IE+ N T VF SGD+S
Sbjct: 703 PEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQS 762
Query: 662 H 662
+
Sbjct: 763 N 763
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 171/375 (45%), Gaps = 12/375 (3%)
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLI---AYNAMISGYTCNGEIESS-VKL--F 290
Y L+S+Y +C + AR +F + + +++ +A+ + + S +KL F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 291 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA---LTTIY 347
+ + +S++V L L I + +GA + + A L ++Y
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 348 SRLNEIDMARKLFDESPEKTVAAWNAMISGYTQN-GLTETALSLFQEMMTTEFTPNPVTI 406
R ++ ARK+FD+ P + V ++NA+ S Y++N A L M PN T
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 407 TTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE 466
T+ + CA L + G ++ I N+ V T+++ MY+ CG++ AR++FD ++
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 467 KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
++ V WNT+I G + + L F+ ML SG+ P+ T+ +L CS G G+ I
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 527 FHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHK 586
++ + L +A ++D+ G + +A ++ P W +++ C +
Sbjct: 323 HARIIVSDSLADLPLDNA-LLDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGCSENG 380
Query: 587 NTDIARVASERLFEL 601
+ A + RL +
Sbjct: 381 FGEQAMLMYRRLLRM 395
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 264/468 (56%), Gaps = 30/468 (6%)
Query: 231 GFHRDAYVLTGLVSLYSKCGDIST----ARLLFGMIGKPDLIAYNAMISGYTCNGEIESS 286
G HR+ Y ++ L++ + +++ A +F I P+ Y+ MI C+ +
Sbjct: 38 GLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIR--ICSRSSQPH 95
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC----------SIQGYCVKSGA-IS 335
+ L LL+ + + P F L + C I + VK+G +S
Sbjct: 96 LGLRYFLLMVKEEEED-----IAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS 150
Query: 336 NSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMM 395
+S V T + IY + ARK+FDE P+ V W+ +++GY + GL L +F+EM+
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 396 TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN-LEPNIYVSTALIDMYAKCGNI 454
P+ ++TT L+ACAQ+G+L+ GKW+H+ +K K+ +E +++V TAL+DMYAKCG I
Sbjct: 211 VKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCI 270
Query: 455 SEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM-LHSGIHPSGVTFLSILYA 513
A ++F ++ +N +W +I GY +GY +A+ + + GI P V L +L A
Sbjct: 271 ETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAA 330
Query: 514 CSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA 573
C+H G + EG + +M +Y I P EH++C+VD++ RAG+L+ AL I MP++P +
Sbjct: 331 CAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLAS 390
Query: 574 VWGTLLGACKIHKNTDIARVASERLFELDPGSV----GYYVLLSNIY-SVGRNFPKAASI 628
VWG LL C+ HKN ++ +A + L +L+ G+V V LSNIY SV RN P+A+ +
Sbjct: 391 VWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRN-PEASKV 449
Query: 629 REVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLT 676
R + ++R + KTPG +++E++G FVSGD SH + I+ ++ L+
Sbjct: 450 RGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLS 497
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 188/388 (48%), Gaps = 21/388 (5%)
Query: 8 ITFINKACN-LPHLAQIHAQLILNGYQSDLASITKLTQKLFDF-GATRH---ARALFFSV 62
+ ++ CN + + H+ I++G + +I+KL +H A ++F S+
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHL--RLRTNLAPDNYTYAFTIAASPDDKY-- 118
P+ F+++ +++ S ++ P + + + ++AP T+ F I A +
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFS 133
Query: 119 -GMLLHAHAIVDG-FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
G +H + +G F S+ V + ++ +Y + + ARKVFDE+P+ D V W+ ++ G
Sbjct: 134 VGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI-QCLAFKFGFHRD 235
VR + ++VFR+M+ G++ D +V T L A A++ L G I + + K D
Sbjct: 194 VRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESD 253
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSV----KLFR 291
+V T LV +Y+KCG I TA +F + + ++ ++ A+I GY G + ++ +L R
Sbjct: 254 VFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLER 313
Query: 292 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCS-IQGYCVKSGAISNSSVSTALTTIYSRL 350
E G + S ++G++ + G L S ++ + + + + R
Sbjct: 314 E---DGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRA 370
Query: 351 NEIDMARKLFDESPEKTVAA-WNAMISG 377
+D A L ++ P K +A+ W A+++G
Sbjct: 371 GRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/630 (29%), Positives = 323/630 (51%), Gaps = 42/630 (6%)
Query: 40 TKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNL 99
K ++ G AR +F + + +N ++ G+ + + L+ + R +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 100 APDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGS-NLFVCSSLVDLYFKFSRVGLARKVF 158
+ + L A + D S + F ++++ Y K R+G A +F
Sbjct: 104 TWNTMISGYVSCGG----IRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLF 159
Query: 159 DEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELG 218
++MPER+ V+W+ +ITG +N D ++ +FR M DS+ + ++ + + + L
Sbjct: 160 EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALVAGLIKNERLS 215
Query: 219 VGMGI--QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDL--------- 267
+ Q + G Y L+ Y + G + AR LF I PDL
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI--PDLCGDDHGGEF 273
Query: 268 --------IAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 319
+++N+MI Y G++ S+ LF ++ +S +TM+ G++H
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM-KDRDTISWNTMID--------GYVH 324
Query: 320 LTCSIQGYCVKSGAISNSSVS-TALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGY 378
++ + + S + + S + + Y+ + +++AR F+++PEK +WN++I+ Y
Sbjct: 325 VSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAY 384
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
+N + A+ LF M P+P T+T+ LSA L +L G +HQ++ K + P++
Sbjct: 385 EKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV-VKTVIPDV 443
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH 497
V ALI MY++CG I E+R++FD M ++ +TWN +I GY HG EAL LF M
Sbjct: 444 PVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKS 503
Query: 498 SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLE 557
+GI+PS +TF+S+L AC+HAGLV E + F M++ Y+IEP EH++ +V++ GQ E
Sbjct: 504 NGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFE 563
Query: 558 KALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYS 617
+A+ I +MP EP VWG LL AC+I+ N +A VA+E + L+P S YVLL N+Y+
Sbjct: 564 EAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYA 623
Query: 618 VGRNFPKAASIREVAKKRKLAKTPGCTLIE 647
+ +A+ +R + +++ K G + ++
Sbjct: 624 DMGLWDEASQVRMNMESKRIKKERGSSWVD 653
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 293 bits (750), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 261/467 (55%), Gaps = 8/467 (1%)
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVS 244
+I ++ V+NG D T V A + + G I + K GF+ D YV LV
Sbjct: 90 TIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVH 149
Query: 245 LYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSST 304
Y CG+ A +FG + D++++ +I+G+T G + ++ F ++ V +T
Sbjct: 150 FYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNL---AT 206
Query: 305 MVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
V ++ S G L L I G +K ++ + AL +Y + ++ A ++F E
Sbjct: 207 YVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELE 266
Query: 365 EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE-FTPNPVTITTTLSACAQLGSLSFGK 423
+K +WN+MISG ++ A+ LF M T+ P+ +T+ LSACA LG++ G+
Sbjct: 267 KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGR 326
Query: 424 WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHG 483
WVH+ I + ++ + ++ TA++DMYAKCG I A ++F+ + KN TWN ++ G +HG
Sbjct: 327 WVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHG 386
Query: 484 YGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK-YRIEPLAEH 542
+G E+L+ F+EM+ G P+ VTFL+ L AC H GLV EG FH M ++ Y + P EH
Sbjct: 387 HGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEH 446
Query: 543 HACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNT--DIARVASERLFE 600
+ CM+D+L RAG L++ALE ++ MPV+P + G +L ACK ++ T ++ + + +
Sbjct: 447 YGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACK-NRGTLMELPKEILDSFLD 505
Query: 601 LDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIE 647
++ G YVLLSNI++ R + A IR + K + ++K PG + IE
Sbjct: 506 IEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 218/478 (45%), Gaps = 16/478 (3%)
Query: 3 QRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQ---KLFDFGATRHARALF 59
+++ ++ I++ +L QI QLI D I K+ K DF + ++ +
Sbjct: 5 EKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFAS--YSSVIL 62
Query: 60 FSVRNP-DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PD 115
S+R+ F +N L+ ++V P +I Y + +PD +T+ A
Sbjct: 63 HSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTF-VSNGFSPDMFTFPPVFKACGKFSG 121
Query: 116 DKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITG 175
+ G +H GF +++V +SLV Y A KVF EMP RD V+W +ITG
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
R Y +++ F M V+ + T V VL + + L +G GI L K
Sbjct: 182 FTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS 238
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
L+ +Y KC +S A +FG + K D +++N+MISG + ++ LF +
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 296 -SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
SG + + ++ + G + + Y + +G ++ + TA+ +Y++ I+
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 355 MARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
A ++F+ K V WNA++ G +G +L F+EM+ F PN VT L+AC
Sbjct: 359 TALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACC 418
Query: 415 QLGSLSFGKWVHQLIKSK--NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
G + G+ +KS+ NL P + +ID+ + G + EA +L +M K V
Sbjct: 419 HTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDV 476
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 171/385 (44%), Gaps = 14/385 (3%)
Query: 207 VLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST--ARLLFGMIGK 264
+L ++ L V IQ RD ++ +V+ K D ++ + +L +
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 265 PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSI 324
+YN ++S Y + ++ ++ + +G T + F + I
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 325 QGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLT 384
G K G + V +L Y E A K+F E P + V +W +I+G+T+ GL
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTAL 444
+ AL F +M + PN T L + ++G LS GK +H LI + ++ AL
Sbjct: 189 KEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 445 IDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM-LHSGIHPS 503
IDMY KC +S+A ++F + +K+ V+WN++I G EA+ LF M SGI P
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 504 GVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEF- 562
G S+L AC+ G V G + H+ + I+ +VD+ + G +E ALE
Sbjct: 306 GHILTSVLSACASLGAVDHGRWV-HEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 563 --IRTMPVEPGPAVWGTLLGACKIH 585
IR+ V W LLG IH
Sbjct: 365 NGIRSKNV----FTWNALLGGLAIH 385
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 263/474 (55%), Gaps = 30/474 (6%)
Query: 231 GFHRDAYVLTGLVSLYSKCGDIST----ARLLFGMIGKPDLIAYNAMISGYTCNGEIESS 286
G HR+ Y ++ L++ + +++ A +F I P+ Y+ MI C+ +
Sbjct: 38 GLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIR--ICSRSSQPH 95
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC----------SIQGYCVKSGA-IS 335
+ L LL+ + T P F L + C I + VK+G +S
Sbjct: 96 LGLRYFLLMVKEEEEDIT-----PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS 150
Query: 336 NSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMM 395
+ V T + IY + ARK+FDE P+ V W+ +++GY + GL L +F+EM+
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML 210
Query: 396 TTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN-LEPNIYVSTALIDMYAKCGNI 454
P+ ++TT L+ACAQ+G+L+ GKW+H+ +K K +E +++V TAL+DMYAKCG I
Sbjct: 211 VRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCI 270
Query: 455 SEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM-LHSGIHPSGVTFLSILYA 513
A ++F+ ++ +N +W +I GY +GY +A + GI P V L +L A
Sbjct: 271 ETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
Query: 514 CSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA 573
C+H G + EG + +M +Y I P EH++C+VD++ RAG+L+ AL+ I MP++P +
Sbjct: 331 CAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLAS 390
Query: 574 VWGTLLGACKIHKNTDIARVASERLFELDPGSV----GYYVLLSNIY-SVGRNFPKAASI 628
VWG LL C+ HKN ++ +A + L +L+ G+V V LSNIY SV RN P+A +
Sbjct: 391 VWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRN-PEAFKV 449
Query: 629 REVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREI 682
R + ++R + KTPG +L+E++G FVSGD SH + I+ ++ L+ +I
Sbjct: 450 RGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVDASQI 503
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 191/405 (47%), Gaps = 21/405 (5%)
Query: 12 NKACN-LPHLAQIHAQLILNGYQSDLASITKLTQKLFDF-GATRH---ARALFFSVRNPD 66
++ CN + + H+ I++G + +I+KL +H A ++F S+ P+
Sbjct: 18 SQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPN 77
Query: 67 IFLFNVLVKGFSVNASPSSSIALYTHL--RLRTNLAPDNYTYAFTIAASPDDKY---GML 121
F+++ +++ S ++ P + + + ++ P T+ F I A + G
Sbjct: 78 SFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQ 137
Query: 122 LHAHAIVDG-FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNC 180
+H + +G F S+ V + ++ +Y + + ARKVFDE+P+ D V W+ ++ G VR
Sbjct: 138 IHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI-QCLAFKFGFHRDAYVL 239
+ ++VF++M+ G++ D +V T L A A++ L G I + + K D +V
Sbjct: 198 LGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVG 257
Query: 240 TGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSV----KLFRELLV 295
T LV +Y+KCG I TA +F + + ++ ++ A+I GY G + + ++ RE
Sbjct: 258 TALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERE--- 314
Query: 296 SGQRVSSSTMVGLIPVSSPFGHLHL-TCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
G + S ++G++ + G L ++ + G + + + R +D
Sbjct: 315 DGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLD 374
Query: 355 MARKLFDESPEKTVAA-WNAMISGYTQNGLTETALSLFQEMMTTE 398
A L ++ P K +A+ W A+++G + E Q ++ E
Sbjct: 375 DALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLE 419
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 246/457 (53%), Gaps = 35/457 (7%)
Query: 268 IAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF--GHLHLTCSIQ 325
+++ + I+ T NG + + K F ++ ++G + T + L+ F G L +
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 326 GYCVKSGAISNS-SVSTALTTIYS-------------------------------RLNEI 353
GY K G N V TA+ +YS R ++
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 354 DMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSAC 413
D A K+FD+ PE+ + +W AMI+G+ + G E AL F+EM + P+ V I L+AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 414 AQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWN 473
LG+LSFG WVH+ + S++ + N+ VS +LID+Y +CG + ARQ+F +M ++ V+WN
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
++I G+ +G HE+L F++M G P VTF L ACSH GLV EG F M
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDI-AR 592
YRI P EH+ C+VD+ RAG+LE AL+ +++MP++P V G+LL AC H N + A
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAE 396
Query: 593 VASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTT 652
+ L +L+ S YV+LSN+Y+ + A+ +R K L K PG + IEI+
Sbjct: 397 RLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCM 456
Query: 653 HVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETV 689
HVF++GD +H T I +LE ++ +R G ET+
Sbjct: 457 HVFMAGDNAHVETTYIREVLELISSDLRLQGCVVETL 493
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 36/354 (10%)
Query: 166 TVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG--I 223
TV+W + I L RN ++ + F DM GV+ + T + +L + +G +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 224 QCLAFKFGFHRD-AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
A K G R+ V T ++ +YSK G ARL+F + + + +N MI GY +G+
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 283 IESSVKL-------------------------------FRELLVSGQRVSSSTMVGLIPV 311
++++ K+ FRE+ +SG + ++ +
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 312 SSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAW 371
+ G L + Y + +N VS +L +Y R ++ AR++F ++TV +W
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 372 NAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKS 431
N++I G+ NG +L F++M F P+ VT T L+AC+ +G + G Q++K
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 432 K-NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGYGLHG 483
+ P I L+D+Y++ G + +A +L SM K N V +++ HG
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 33/285 (11%)
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
N ++++D Y + +V A K+FD+MPERD ++W +I G V+ Y ++++ FR+M
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQ 198
Query: 194 ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIS 253
+GV+ D ++ L A L L G+ + F + V L+ LY +CG +
Sbjct: 199 ISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVE 258
Query: 254 TARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS 313
AR +F + K ++++N++I G+ NG S+ FR++ G + + T G + S
Sbjct: 259 FARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 314 PFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNA 373
G V+ G L + + + SP + +
Sbjct: 319 HVG-----------LVEEG-----------------LRYFQIMKCDYRISPR--IEHYGC 348
Query: 374 MISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
++ Y++ G E AL L Q M PN V I + L+AC+ G+
Sbjct: 349 LVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSLLAACSNHGN 390
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 361 DESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL--GS 418
++S +T +W + I+ T+NG A F +M PN +T LS C GS
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 419 LSFGKWVHQLIKSKNLEPN-IYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIF 477
+ G +H L+ N + V TA+I MY+K G +AR +FD M +KN+VTWNT+I
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 478 GY-----------------------------GL--HGYGHEALKLFKEMLHSGIHPSGVT 506
GY G GY EAL F+EM SG+ P V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 507 FLSILYACSHAGLVREGEEIF-----HDMVNKYRIEPLAEHHACMVDILGRAGQLEKALE 561
++ L AC++ G + G + D N R+ ++D+ R G +E A +
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN------SLIDLYCRCGCVEFARQ 262
Query: 562 FIRTM 566
M
Sbjct: 263 VFYNM 267
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 257/464 (55%), Gaps = 39/464 (8%)
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESS--VKLFRELLVSGQRVSSSTMVGL 308
++S AR +F P+ Y A+++ Y+ + + +S FR ++ + + L
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 309 IPVSSPF-----------GHL-----HLTCSIQGYCVKSGAISNSSVS------------ 340
+ S+P+ HL HL +Q + S A S S ++
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 341 -----TALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMM 395
TA+ + Y+R +I A LF++ PE+ V +WNA+++ TQNGL A+SLF+ M+
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 396 T-TEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNI 454
PN VT+ LSACAQ G+L K +H ++L +++VS +L+D+Y KCGN+
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 455 SEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH---SGIHPSGVTFLSIL 511
EA +F S+K+ WN++I + LHG EA+ +F+EM+ + I P +TF+ +L
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 512 YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPG 571
AC+H GLV +G F M N++ IEP EH+ C++D+LGRAG+ ++ALE + TM ++
Sbjct: 372 NACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKAD 431
Query: 572 PAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREV 631
A+WG+LL ACKIH + D+A VA + L L+P + GY +++N+Y N+ +A R++
Sbjct: 432 EAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKM 491
Query: 632 AKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKL 675
K + K PG + IEI+ H F S D+SH IY +L+ L
Sbjct: 492 IKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/528 (22%), Positives = 220/528 (41%), Gaps = 89/528 (16%)
Query: 7 IITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATR-----HARALFFS 61
I I+K+ +L HL Q+ + +I++G L+ L KL F R +AR +F
Sbjct: 27 ISAVISKSRHLNHLKQVQSFMIVSG----LSHSHFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 62 VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLA---PDNYTYAFTIAASPDDKY 118
P+ L+ ++ +S ++ P + + ++ RL N + P+++ Y + ++P
Sbjct: 83 FSFPNTHLYAAVLTAYS-SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSS 141
Query: 119 GM---LLHAHAIVDGFGSNLFVCSSLVDLYFK-FSRVGLARKVFDEM------------- 161
L+H H GF + V ++L+ Y S + LAR++FDEM
Sbjct: 142 AFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLS 201
Query: 162 ------------------PERDTVAWNTVITGLVRNCYYDDSIQVFRDMVAN-GVQVDST 202
PERD +WN ++ +N + +++ +FR M+ ++ +
Sbjct: 202 GYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEV 261
Query: 203 TVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMI 262
TVV VL A A+ L + GI A++ D +V LV LY KCG++ A +F M
Sbjct: 262 TVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA 321
Query: 263 GKPDLIAYNAMISGYTCNGEIESSVKLFRELL---VSGQRVSSSTMVGLIPVSSPFGHLH 319
K L A+N+MI+ + +G E ++ +F E++ ++ + T +GL+
Sbjct: 322 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL---------- 371
Query: 320 LTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYT 379
C G +S D+ F P + + +I
Sbjct: 372 ------NACTHGGLVSKGR------------GYFDLMTNRFGIEPR--IEHYGCLIDLLG 411
Query: 380 QNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIY 439
+ G + AL + M T + + + L+AC G L + + + + N Y
Sbjct: 412 RAGRFDEALEV---MSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGY 468
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVT---WNTIIFGYGLHGY 484
V+ + ++Y + GN EAR+ + +N W+ I +H +
Sbjct: 469 VAM-MANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQF 515
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 300/571 (52%), Gaps = 41/571 (7%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G LHAH I G + + LV Y F+ + A+ + + + WN +I +R
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHR-DAY 237
N + +S+ V++ M++ G++ D T +V+ A A L + G + + + HR + Y
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG-SIEVSSHRCNLY 220
Query: 238 VLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG 297
V L+S+Y + G + AR LF + + D +++NA+I+ YT ++ + KL + +SG
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 298 Q-----------------------------------RVSSSTMVGLIPVSSPFGHLHLTC 322
R+ S M+ + S G L
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 323 SIQGYCVKSGAISNS--SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQ 380
++S + S+ +V +L T+YSR +++ A +F + +++ WN++ISG+
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 381 NGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH-QLIKSKNLEPNIY 439
N +E L +EM+ + F PN +T+ + L A++G+L GK H +++ ++ + +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
+ +L+DMYAK G I A+++FDSM +++ VT+ ++I GYG G G AL FK+M SG
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 500 IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
I P VT +++L ACSH+ LVREG +F M + + I EH++CMVD+ RAG L+KA
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 560 LEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASER-LFELDPGSVGYYVLLSNIYSV 618
+ T+P EP A+ TLL AC IH NT+I A+++ L E P +G+Y+LL+++Y+V
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 619 GRNFPKAASIREVAKKRKLAKTPGCTLIEIN 649
++ K +++ + + K L+E +
Sbjct: 641 TGSWSKLVTVKTLLSDLGVQKAHEFALMETD 671
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 236/513 (46%), Gaps = 60/513 (11%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIF---LFNVLVKGFS 78
Q+HA I +G + D + KL F A+ + N +I +NVL+ +
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTI---TENSEILHPLPWNVLIGSYI 160
Query: 79 VNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDDKYGMLLHAHAIVDGFGSNL 135
N S+++Y + + + D +TY I AA D YG ++H V NL
Sbjct: 161 RNKRFQESVSVYKRM-MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL 219
Query: 136 FVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYD-----DSIQVFR 190
+VC++L+ +Y +F +V +AR++FD M ERD V+WN +I NCY ++ ++
Sbjct: 220 YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAII-----NCYTSEEKLGEAFKLLD 274
Query: 191 DMVANGVQ-----------------------------------VDSTTVVTVLPAVAELQ 215
M +GV+ + S ++ L A + +
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 216 ELGVGMGIQCLAFK-FGFHRDA-YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAM 273
L G CL + F D V L+++YS+C D+ A ++F + L +N++
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSI 394
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
ISG+ N E + L +E+L+SG + T+ ++P+ + G+L Y ++ +
Sbjct: 395 ISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQS 454
Query: 334 ISNSSV-STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQ 392
+ + +L +Y++ EI A+++FD ++ + ++I GY + G E AL+ F+
Sbjct: 455 YKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFK 514
Query: 393 EMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKC 451
+M + P+ VT+ LSAC+ + G W+ ++ + + + ++D+Y +
Sbjct: 515 DMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRA 574
Query: 452 GNISEARQLFDSMS-EKNTVTWNTIIFGYGLHG 483
G + +AR +F ++ E ++ T++ +HG
Sbjct: 575 GYLDKARDIFHTIPYEPSSAMCATLLKACLIHG 607
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 300/571 (52%), Gaps = 41/571 (7%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G LHAH I G + + LV Y F+ + A+ + + + WN +I +R
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHR-DAY 237
N + +S+ V++ M++ G++ D T +V+ A A L + G + + + HR + Y
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG-SIEVSSHRCNLY 220
Query: 238 VLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG 297
V L+S+Y + G + AR LF + + D +++NA+I+ YT ++ + KL + +SG
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 298 Q-----------------------------------RVSSSTMVGLIPVSSPFGHLHLTC 322
R+ S M+ + S G L
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 323 SIQGYCVKSGAISNS--SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQ 380
++S + S+ +V +L T+YSR +++ A +F + +++ WN++ISG+
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 381 NGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH-QLIKSKNLEPNIY 439
N +E L +EM+ + F PN +T+ + L A++G+L GK H +++ ++ + +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
+ +L+DMYAK G I A+++FDSM +++ VT+ ++I GYG G G AL FK+M SG
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 500 IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
I P VT +++L ACSH+ LVREG +F M + + I EH++CMVD+ RAG L+KA
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 560 LEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASER-LFELDPGSVGYYVLLSNIYSV 618
+ T+P EP A+ TLL AC IH NT+I A+++ L E P +G+Y+LL+++Y+V
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 619 GRNFPKAASIREVAKKRKLAKTPGCTLIEIN 649
++ K +++ + + K L+E +
Sbjct: 641 TGSWSKLVTVKTLLSDLGVQKAHEFALMETD 671
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 236/513 (46%), Gaps = 60/513 (11%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIF---LFNVLVKGFS 78
Q+HA I +G + D + KL F A+ + N +I +NVL+ +
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTI---TENSEILHPLPWNVLIGSYI 160
Query: 79 VNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDDKYGMLLHAHAIVDGFGSNL 135
N S+++Y + + + D +TY I AA D YG ++H V NL
Sbjct: 161 RNKRFQESVSVYKRM-MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL 219
Query: 136 FVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYD-----DSIQVFR 190
+VC++L+ +Y +F +V +AR++FD M ERD V+WN +I NCY ++ ++
Sbjct: 220 YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAII-----NCYTSEEKLGEAFKLLD 274
Query: 191 DMVANGVQ-----------------------------------VDSTTVVTVLPAVAELQ 215
M +GV+ + S ++ L A + +
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 216 ELGVGMGIQCLAFK-FGFHRDA-YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAM 273
L G CL + F D V L+++YS+C D+ A ++F + L +N++
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSI 394
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
ISG+ N E + L +E+L+SG + T+ ++P+ + G+L Y ++ +
Sbjct: 395 ISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQS 454
Query: 334 ISNSSV-STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQ 392
+ + +L +Y++ EI A+++FD ++ + ++I GY + G E AL+ F+
Sbjct: 455 YKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFK 514
Query: 393 EMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKC 451
+M + P+ VT+ LSAC+ + G W+ ++ + + + ++D+Y +
Sbjct: 515 DMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRA 574
Query: 452 GNISEARQLFDSMS-EKNTVTWNTIIFGYGLHG 483
G + +AR +F ++ E ++ T++ +HG
Sbjct: 575 GYLDKARDIFHTIPYEPSSAMCATLLKACLIHG 607
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 288 bits (738), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 255/496 (51%), Gaps = 34/496 (6%)
Query: 225 CLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIE 284
C F R+ Y +VS Y K G + AR++F + + D++++N M+ GY +G +
Sbjct: 102 CKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLH 161
Query: 285 SSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVS---- 340
++ ++E SG + + + GL+ L L G + +G +SN +S
Sbjct: 162 EALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSII 221
Query: 341 ---------------------------TALTTIYSRLNEIDMARKLFDESPEKTVAAWNA 373
T L + Y++L +++ A KLF E PEK +W A
Sbjct: 222 DAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTA 281
Query: 374 MISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN 433
+I+GY + G AL LF++M+ P T ++ L A A + SL GK +H + N
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 434 LEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGYGLHGYGHEALKLF 492
+ PN V ++LIDMY+K G++ + ++F +K + V WNT+I HG GH+AL++
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 493 KEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGR 552
+M+ + P+ T + IL ACSH+GLV EG F M ++ I P EH+AC++D+LGR
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGR 461
Query: 553 AGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLL 612
AG ++ + I MP EP +W +LG C+IH N ++ + A++ L +LDP S Y+LL
Sbjct: 462 AGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILL 521
Query: 613 SNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATA--IYA 670
S+IY+ + +R V KKR++ K + IEI F D SH+HA IY
Sbjct: 522 SSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYF 581
Query: 671 MLEKLTGKMREIGYQT 686
+L L + E +T
Sbjct: 582 ILHNLAAVIEEEASRT 597
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 173/384 (45%), Gaps = 34/384 (8%)
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
NL+ +++V Y K + AR VFD MPERD V+WNT++ G ++ +++ +++
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 194 ANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH-------------------- 233
+G++ + + +L A + ++L + GF
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 234 -----------RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
+D ++ T L+S Y+K GD+ A LF + + + +++ A+I+GY G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA 342
++ LFR+++ G + T + S+ L I GY +++ N+ V ++
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 343 LTTIYSRLNEIDMARKLFDESPEK-TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTP 401
L +YS+ ++ + ++F +K WN MIS Q+GL AL + +M+ P
Sbjct: 352 LIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQP 411
Query: 402 NPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQL 460
N T+ L+AC+ G + G +W + + P+ LID+ + G E +
Sbjct: 412 NRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRK 471
Query: 461 FDSMS-EKNTVTWNTIIFGYGLHG 483
+ M E + WN I+ +HG
Sbjct: 472 IEEMPFEPDKHIWNAILGVCRIHG 495
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 152/385 (39%), Gaps = 65/385 (16%)
Query: 264 KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCS 323
+P +A + +S + E+ +V L G R+ + L+ L
Sbjct: 9 RPICVA-QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKW 67
Query: 324 IQGYCVKSG-AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNG 382
I + +G N+ +S L +Y + + A K+FD+ + + +WN M+SGY ++G
Sbjct: 68 IHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSG 127
Query: 383 L-------------------------------TETALSLFQEMMTTEFTPNPVTITTTLS 411
+ AL ++E + N + L+
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 412 ACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS------ 465
AC + L + H + N+ +S ++ID YAKCG + A++ FD M+
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 466 -------------------------EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGI 500
EKN V+W +I GY G G+ AL LF++M+ G+
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 501 HPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL 560
P TF S L A + +R G+EI H + + + P A + ++D+ ++G LE +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEI-HGYMIRTNVRPNAIVISSLIDMYSKSGSLEASE 366
Query: 561 EFIRTMPVEPGPAVWGTLLGACKIH 585
R + W T++ A H
Sbjct: 367 RVFRICDDKHDCVFWNTMISALAQH 391
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 161/378 (42%), Gaps = 38/378 (10%)
Query: 35 DLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLR 94
+L S + G AR +F S+ D+ +N +V G++ + + ++ Y R
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 95 LRTNLAPDNYTYAFTIAASPDDKYGML---LHAHAIVDGFGSNLFVCSSLVDLYFKFSRV 151
R+ + + +++A + A + L H +V GF SN+ + S++D Y K ++
Sbjct: 172 -RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 152 GLARKVFDE-------------------------------MPERDTVAWNTVITGLVRNC 180
A++ FDE MPE++ V+W +I G VR
Sbjct: 231 ESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQG 290
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLT 240
+ ++ +FR M+A GV+ + T + L A A + L G I + +A V++
Sbjct: 291 SGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS 350
Query: 241 GLVSLYSKCGDISTARLLFGMI-GKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR 299
L+ +YSK G + + +F + K D + +N MIS +G ++++ +++ +
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 300 VSSSTMVGLIPVSSPFGHLHLTCS-IQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+ +T+V ++ S G + + V+ G + + L + R +
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMR 470
Query: 359 LFDESP-EKTVAAWNAMI 375
+E P E WNA++
Sbjct: 471 KIEEMPFEPDKHIWNAIL 488
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/543 (30%), Positives = 274/543 (50%), Gaps = 35/543 (6%)
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRN--- 179
H + G ++LF+ + L+ Y K A K+FDEMP R+ V WN +I G+++
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 180 ---------CYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
CY S +F D V +D + + ++ + + G+ + CL K
Sbjct: 119 TNHRAHLGFCYL--SRILFTD-----VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
G + T LV Y KCG I AR +F + DL+ +NA++S Y NG I+ + L
Sbjct: 172 GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLL 231
Query: 291 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSI-QGYCVKSGAISNS-----SVSTALT 344
+ + R F L C I QG + + S V+TAL
Sbjct: 232 KLMGSDKNRFRGDYFT--------FSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALL 283
Query: 345 TIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
+Y++ N + AR+ F+ + V +WNAMI G+ QNG A+ LF +M+ P+ +
Sbjct: 284 NMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDEL 343
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
T + LS+CA+ ++ K V ++ K + V+ +LI Y++ GN+SEA F S+
Sbjct: 344 TFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSI 403
Query: 465 SEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGE 524
E + V+W ++I HG+ E+L++F+ ML + P +TFL +L ACSH GLV+EG
Sbjct: 404 REPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGL 462
Query: 525 EIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKI 584
F M Y+IE EH+ C++D+LGRAG +++A + + +MP EP G C I
Sbjct: 463 RCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNI 522
Query: 585 HKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKL-AKTPGC 643
H+ + + +++L E++P Y +LSN Y ++ +AA +R+ ++ KTPGC
Sbjct: 523 HEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGC 582
Query: 644 TLI 646
+ +
Sbjct: 583 SWL 585
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 160/343 (46%), Gaps = 26/343 (7%)
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA 370
+S+ HL G+ VK G ++ + L Y+++ E D A KLFDE P + +
Sbjct: 45 LSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVT 104
Query: 371 WNAMISGYTQ-----NGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
WN +I G Q N ++ T+ + + V+ + C ++ G +
Sbjct: 105 WNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQL 164
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYG 485
H L+ + LE + + ST+L+ Y KCG I EAR++F+++ +++ V WN ++ Y L+G
Sbjct: 165 HCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMI 224
Query: 486 HEALKLFKEMLHSGIHPSG--VTFLSILYACSHAGLVREGEEIFHDMVNK--YRIE-PLA 540
EA L K M G TF S+L AC + +G++I H ++ K Y+ + P+A
Sbjct: 225 DEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQI-HAILFKVSYQFDIPVA 279
Query: 541 EHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFE 600
++++ ++ L A E +M V + ++G + + + R+ + L E
Sbjct: 280 ---TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE 336
Query: 601 -LDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPG 642
L P + + +LS+ K ++I E+ + + + G
Sbjct: 337 NLQPDELTFASVLSSC-------AKFSAIWEIKQVQAMVTKKG 372
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 7 IITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPD 66
+I + N+ Q+H ++ G +S T L G AR +F +V + D
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 67 IFLFNVLVKGFSVNASPSSSIALYTHLRLRTN-LAPDNYTYAFTIAASPDDKYGMLLHAH 125
+ L+N LV + +N + L + N D +T++ ++A ++ G +HA
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQ-GKQIHAI 266
Query: 126 AIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDS 185
+ ++ V ++L+++Y K + + AR+ F+ M R+ V+WN +I G +N ++
Sbjct: 267 LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREA 326
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
+++F M+ +Q D T +VL + A+ + +Q + K G V L+S
Sbjct: 327 MRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISS 386
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
YS+ G++S A L F I +PDL+++ ++I +G E S+++F +L Q
Sbjct: 387 YSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQ 439
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/553 (29%), Positives = 279/553 (50%), Gaps = 36/553 (6%)
Query: 169 WNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAF 228
+N ++ L + + +F ++ G+ D+ T+ VL ++ L+++ G + A
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 229 KFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVK 288
K G D+YV L+ +Y+ G I +F + + D++++N +IS Y NG E ++
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 289 LFREL-LVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCV------------------ 329
+F+ + S + T+V + S +L + I + V
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFC 193
Query: 330 KSGAIS------------NSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISG 377
K G + N T++ Y ID AR LF+ SP K V W AM++G
Sbjct: 194 KCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNG 253
Query: 378 YTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPN 437
Y Q + AL LF+ M T P+ + + L+ CAQ G+L GKW+H I + +
Sbjct: 254 YVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVD 313
Query: 438 IYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH 497
V TAL+DMYAKCG I A ++F + E++T +W ++I+G ++G AL L+ EM +
Sbjct: 314 KVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMEN 373
Query: 498 SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLE 557
G+ +TF+++L AC+H G V EG +IFH M ++ ++P +EH +C++D+L RAG L+
Sbjct: 374 VGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLD 433
Query: 558 KALEFIRTMPVEPGPA---VWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSN 614
+A E I M E V+ +LL A + + N IA +E+L +++ + LL++
Sbjct: 434 EAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLAS 493
Query: 615 IYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDR--SHSHATAIYAML 672
+Y+ + ++R K + K PGC+ IEI+G H F+ GD SH I +ML
Sbjct: 494 VYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Query: 673 EKLTGKMREIGYQ 685
+ T M ++ ++
Sbjct: 554 HQTTNLMLDLEHK 566
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 214/442 (48%), Gaps = 44/442 (9%)
Query: 62 VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY--- 118
++ P + ++N ++K + S + +AL+ LR + L PDN+T + + +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQ-GLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G +H +A+ G + +V +SL+ +Y ++ + KVFDEMP+RD V+WN +I+ V
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 179 NCYYDDSIQVFRDMVA-NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF---GFHR 234
N ++D+I VF+ M + ++ D T+V+ L A + L+ L +G I ++F F
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERI----YRFVVTEFEM 180
Query: 235 DAYVLTGLVSLYSKC-------------------------------GDISTARLLFGMIG 263
+ LV ++ KC G I AR+LF
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 264 KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCS 323
D++ + AM++GY + +++LFR + +G R + +V L+ + G L
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKW 300
Query: 324 IQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGL 383
I GY ++ + V TAL +Y++ I+ A ++F E E+ A+W ++I G NG+
Sbjct: 301 IHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGM 360
Query: 384 TETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV-HQLIKSKNLEPNIYVST 442
+ AL L+ EM + +T L+AC G ++ G+ + H + + N++P +
Sbjct: 361 SGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS 420
Query: 443 ALIDMYAKCGNISEARQLFDSM 464
LID+ + G + EA +L D M
Sbjct: 421 CLIDLLCRAGLLDEAEELIDKM 442
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 173/351 (49%), Gaps = 35/351 (9%)
Query: 261 MIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHL 320
++ P L+ YN M+ + LF EL G + T+ ++ +
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 321 TCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQ 380
+ GY VK+G +S VS +L +Y+ L +I++ K+FDE P++ V +WN +IS Y
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 381 NGLTETALSLFQEM-MTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIY 439
NG E A+ +F+ M + + TI +TLSAC+ L +L G+ +++ + ++ E ++
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVR 183
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGY-------------------- 479
+ AL+DM+ KCG + +AR +FDSM +KN W +++FGY
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 480 ------GLHGYGH-----EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
++GY EAL+LF+ M +GI P +S+L C+ G + +G+ I H
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI-H 302
Query: 529 DMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
+N+ R+ +VD+ + G +E ALE + E A W +L+
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLI 352
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 245/448 (54%), Gaps = 8/448 (1%)
Query: 232 FHRDAYVLTGLV--SLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKL 289
D+++++ LV S S D++ AR L +N + GY+ + S+ +
Sbjct: 41 LQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWV 100
Query: 290 FRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSR 349
+ E+ G + + T L+ + F L IQ +K G + V L +Y
Sbjct: 101 YSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGT 160
Query: 350 LNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTT 409
+ ARK+FDE E+ V +WN++++ +NG F EM+ F P+ T+
Sbjct: 161 CKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVL 220
Query: 410 LSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNT 469
LSAC G+LS GK VH + + LE N + TAL+DMYAK G + AR +F+ M +KN
Sbjct: 221 LSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNV 278
Query: 470 VTWNTIIFGYGLHGYGHEALKLFKEML-HSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
TW+ +I G +G+ EAL+LF +M+ S + P+ VTFL +L ACSH GLV +G + FH
Sbjct: 279 WTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFH 338
Query: 529 DMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNT 588
+M ++I+P+ H+ MVDILGRAG+L +A +FI+ MP EP VW TLL AC IH +
Sbjct: 339 EMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDE 398
Query: 589 D---IARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTL 645
D I +RL EL+P G V+++N ++ R + +AA +R V K+ K+ K G +
Sbjct: 399 DDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESC 458
Query: 646 IEINGTTHVFVSGDRSHSHATAIYAMLE 673
+E+ G+ H F SG S +IY +L+
Sbjct: 459 LELGGSFHRFFSGYDPRSEYVSIYELLD 486
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 194/418 (46%), Gaps = 42/418 (10%)
Query: 3 QRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQ--KLFDFGATRHARALFF 60
+++ + F+ ++ HL QIH Q+ L+ Q+D I++L + L AR L
Sbjct: 12 RKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLL 71
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---K 117
+ +N+L +G+S + SP SI +Y+ ++ R + P+ T+ F + A
Sbjct: 72 HSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMK-RRGIKPNKLTFPFLLKACASFLGLT 130
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLV 177
G + + GF +++V ++L+ LY + ARKVFDEM ER+ V+WN+++T LV
Sbjct: 131 AGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV 190
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAY 237
N + + F +M+ D TT+V +L A LG + Q + + +
Sbjct: 191 ENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELEL--NCR 248
Query: 238 VLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV-S 296
+ T LV +Y+K G + ARL+F + ++ ++AMI G G E +++LF +++ S
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
R + T +G++ C+ C +G + + Y +E++
Sbjct: 309 SVRPNYVTFLGVL------------CA----CSHTGLVDDG---------YKYFHEMEKI 343
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
K+ + + + AM+ + G A ++M F P+ V T LSAC+
Sbjct: 344 HKI-----KPMMIHYGAMVDILGRAGRLNEAYDFIKKM---PFEPDAVVWRTLLSACS 393
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 240/460 (52%), Gaps = 34/460 (7%)
Query: 255 ARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
AR LF YN +I Y + + S+ L+ L G R S T + S+
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAM 374
F + +SG S+S T L T Y++L + AR++FDE ++ V WNAM
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 375 ISGYTQNGLTETALSLFQEMMTTEFT--------------------------------PN 402
I+GY + G + A+ LF M T PN
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
+T+ + L ACA LG L G+ + + NIYV A I+MY+KCG I A++LF+
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 463 SM-SEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
+ +++N +WN++I HG EAL LF +ML G P VTF+ +L AC H G+V
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
+G+E+F M ++I P EH+ CM+D+LGR G+L++A + I+TMP++P VWGTLLGA
Sbjct: 335 KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Query: 582 CKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTP 641
C H N +IA +ASE LF+L+P + G V++SNIY+ + +R++ KK + K
Sbjct: 395 CSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAA 454
Query: 642 GCT-LIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMR 680
G + +E+ H F D+SH + IY +LE++ +M+
Sbjct: 455 GYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 146 bits (368), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 188/416 (45%), Gaps = 63/416 (15%)
Query: 20 LAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSV 79
+ Q+HA + G + L Q+L +AR LF +N FL+N L++ + V
Sbjct: 4 IKQLHAHCLRTG----VDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 80 NASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGM---LLHAHAIVDGFGSNLF 136
+ P SI LY L L P ++T+ F AAS LLH+ GF S+ F
Sbjct: 60 HHQPHESIVLYNLLSF-DGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWN-------------------------- 170
C++L+ Y K + AR+VFDEM +RD WN
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 171 -----TVITGLVRNCYYDDSIQVFRDMVAN-GVQVDSTTVVTVLPAVAELQELGVGMGIQ 224
TVI+G +N Y +++++F M + V+ + TVV+VLPA A L EL +G ++
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 225 CLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIG-KPDLIAYNAMISGYTCNGEI 283
A + GF + YV + +YSKCG I A+ LF +G + +L ++N+MI +G+
Sbjct: 239 GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 284 ESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNS-----S 338
+ ++ LF ++L G++ + T VGL+ L C G VK + S
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLL----------LACVHGGMVVKGQELFKSMEEVHK 348
Query: 339 VSTALT------TIYSRLNEIDMARKLFDESPEKTVA-AWNAMISGYTQNGLTETA 387
+S L + R+ ++ A L P K A W ++ + +G E A
Sbjct: 349 ISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 314/653 (48%), Gaps = 99/653 (15%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRH------ARALF-------FSVRN-PDI 67
QIH +LI G + T++ + F ++R AR +F FS D
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRI---VLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDP 86
Query: 68 FLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPD---DKYGMLLHA 124
FL+N ++K S P ++ L L L ++ D ++ + + A K GM +H
Sbjct: 87 FLWNAVIKSHSHGKDPRQALLLLC-LMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 125 HAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDD 184
G S+LF+ + L+ LY K +GL+R++FD MP+RD+V++N++I G V+ C
Sbjct: 146 FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK-C---- 200
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVS 244
G+ V + + ++P E++ L ++S
Sbjct: 201 -----------GLIVSARELFDLMP--MEMKNL-------------------ISWNSMIS 228
Query: 245 LYSKCGD-ISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSS 303
Y++ D + A LF + + DLI++N+MI GY +G IE + LF +++ V+ +
Sbjct: 229 GYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLF-DVMPRRDVVTWA 287
Query: 304 TMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDES 363
TM I G Y++L + A+ LFD+
Sbjct: 288 TM------------------IDG--------------------YAKLGFVHHAKTLFDQM 309
Query: 364 PEKTVAAWNAMISGYTQNGLTETALSLFQEM-MTTEFTPNPVTITTTLSACAQLGSLSFG 422
P + V A+N+M++GY QN AL +F +M + P+ T+ L A AQLG LS
Sbjct: 310 PHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA 369
Query: 423 KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLH 482
+H I K + ALIDMY+KCG+I A +F+ + K+ WN +I G +H
Sbjct: 370 IDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIH 429
Query: 483 GYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEH 542
G G A + ++ + P +TF+ +L ACSH+GLV+EG F M K++IEP +H
Sbjct: 430 GLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQH 489
Query: 543 HACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELD 602
+ CMVDIL R+G +E A I MPVEP +W T L AC HK + + ++ L
Sbjct: 490 YGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQA 549
Query: 603 PGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVF 655
+ YVLLSN+Y+ + +R + K+RK+ K PGC+ IE++G H F
Sbjct: 550 GYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 305/538 (56%), Gaps = 38/538 (7%)
Query: 147 KFSR--VGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTV 204
+FSR V +++ D+ +W ++ L ++ + +++ V+ DM +G+ S V
Sbjct: 48 EFSRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAV 107
Query: 205 VTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK 264
+VL A +++ + G I A K G YV TGLV LYS+ G I A+ F I +
Sbjct: 108 TSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAE 167
Query: 265 PDLIAYNAMISGYTCNGEIESSVKLFRE----------LLVS-----GQRVSSSTMVGLI 309
+ +++N+++ GY +GE++ + ++F + L++S G ++ ++ +
Sbjct: 168 KNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
Query: 310 PVSSPFGHLHLTCSIQGY--CVKS-------GAISNSSVSTALTTI--YSRLNEIDMARK 358
P+ SP L I GY C + A+ + + +T I Y++L ++ A +
Sbjct: 228 PLKSPASWNIL---IGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEE 284
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMM--TTEFTPNPVTITTTLSACAQL 416
LF +K ++AMI+ YTQNG + AL LF +M+ + P+ +T+++ +SA +QL
Sbjct: 285 LFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQL 344
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTII 476
G+ SFG WV I ++ + +ST+LID+Y K G+ ++A ++F ++++K+TV+++ +I
Sbjct: 345 GNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMI 404
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
G G++G EA LF M+ I P+ VTF +L A SH+GLV+EG + F+ M + + +
Sbjct: 405 MGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNL 463
Query: 537 EPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASE 596
EP A+H+ MVD+LGRAG+LE+A E I++MP++P VWG LL A +H N + +A
Sbjct: 464 EPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACS 523
Query: 597 RLFELDPGSVGYYVLLSNIY-SVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTH 653
+L+ GY L+ IY SVGR + A ++R+ K++KL KT GC+ +E G+ H
Sbjct: 524 HCVKLETDPTGYLSHLAMIYSSVGR-WDDARTVRDSIKEKKLCKTLGCSWVE--GSYH 578
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/505 (24%), Positives = 235/505 (46%), Gaps = 33/505 (6%)
Query: 10 FINKACNLPHLAQIHAQLILNGY---QSDLASITKLTQKLFDFGATRHARALFFSVRNPD 66
F+ + L Q+HAQL++N Y + L T K F + + + D
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHD 68
Query: 67 IFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKY---GMLLH 123
F + LV+ S + ++ +Y + + + P ++ + A + G +H
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMH-NSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 124 AHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYD 183
A A+ +G ++V + LV LY + + LA+K FD++ E++TV+WN+++ G + + D
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 184 DSIQVF-----RDMVA----------NGVQVDSTTVVTVLPAVAELQ-ELGVGMGIQCLA 227
++ +VF +D V+ G ++ ++ + +P + + +G + C
Sbjct: 188 EARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCRE 247
Query: 228 FKFGF-------HRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCN 280
K ++ ++S Y+K GD+ +A LF ++ K D + Y+AMI+ YT N
Sbjct: 248 MKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 307
Query: 281 GEIESSVKLFRELLVSGQRVSSS--TMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSS 338
G+ + ++KLF ++L + T+ ++ +S G+ ++ Y + G +
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDL 367
Query: 339 VSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE 398
+ST+L +Y + + A K+F +K +++AMI G NG+ A SLF M+ +
Sbjct: 368 LSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKK 427
Query: 399 FTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEAR 458
PN VT T LSA + G + G +K NLEP+ ++DM + G + EA
Sbjct: 428 IPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAY 487
Query: 459 QLFDSMS-EKNTVTWNTIIFGYGLH 482
+L SM + N W ++ GLH
Sbjct: 488 ELIKSMPMQPNAGVWGALLLASGLH 512
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 188/499 (37%), Gaps = 82/499 (16%)
Query: 8 ITFINKAC----NLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR 63
+T + +AC N+ IHAQ + NG + T L G A+ F +
Sbjct: 107 VTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIA 166
Query: 64 NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLH 123
+ +N L+ G+ + + ++ + P+ ++ + S K G + +
Sbjct: 167 EKNTVSWNSLLHGYLESGELDEARRVFDKI-------PEKDAVSWNLIISSYAKKGDMGN 219
Query: 124 AHAIVDGFG-SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR---- 178
A ++ + + L+ Y + LAR FD MP+++ V+W T+I+G +
Sbjct: 220 ACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDV 279
Query: 179 ----------------------NCYYD-----DSIQVFRDMVANG--VQVDSTTVVTVLP 209
CY D++++F M+ +Q D T+ +V+
Sbjct: 280 QSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVS 339
Query: 210 AVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIA 269
A ++L G ++ + G D + T L+ LY K GD + A +F + K D ++
Sbjct: 340 ANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS 399
Query: 270 YNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGY-C 328
Y+AMI G NG + LF ++ + T GL+ S G + +GY C
Sbjct: 400 YSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQ-----EGYKC 454
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
S + D + E + + M+ + G E A
Sbjct: 455 FNS---------------------------MKDHNLEPSADHYGIMVDMLGRAGRLEEAY 487
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMY 448
L + M PN L A ++ FG+ +P Y+S L +Y
Sbjct: 488 ELIKSM---PMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLS-HLAMIY 543
Query: 449 AKCGNISEARQLFDSMSEK 467
+ G +AR + DS+ EK
Sbjct: 544 SSVGRWDDARTVRDSIKEK 562
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 201/648 (31%), Positives = 325/648 (50%), Gaps = 61/648 (9%)
Query: 35 DLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLR 94
++ S T + L D G + A LF + ++ +N LV G N + ++ +
Sbjct: 137 NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMP 196
Query: 95 LRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLA 154
R D ++ I ++ GM D N+ +S+V Y ++ V A
Sbjct: 197 SR-----DVVSWNAMIKGYIEND-GMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREA 250
Query: 155 RKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV--ANGVQVDSTTVVTVLPAVA 212
++F EMPER+ V+W +I+G N Y +++ +F +M + V + T++++ A
Sbjct: 251 YRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACG 310
Query: 213 ----ELQELGVGMGIQCLAFKF-GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDL 267
E + LG + Q ++ + D + LV +Y+ G I++A+ L DL
Sbjct: 311 GLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDL 368
Query: 268 IAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGY 327
+ N +I+ Y NG++E + LF + +VS ++M I GY
Sbjct: 369 QSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSM------------------IDGY 410
Query: 328 CVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETA 387
+++G +S A LF + +K W MISG QN L A
Sbjct: 411 -LEAGDVSR-------------------AFGLFQKLHDKDGVTWTVMISGLVQNELFAEA 450
Query: 388 LSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN--LEPNIYVSTALI 445
SL +M+ P T + LS+ +L GK +H +I +P++ + +L+
Sbjct: 451 ASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLV 510
Query: 446 DMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGV 505
MYAKCG I +A ++F M +K+TV+WN++I G HG +AL LFKEML SG P+ V
Sbjct: 511 SMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSV 570
Query: 506 TFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRT 565
TFL +L ACSH+GL+ G E+F M Y I+P +H+ M+D+LGRAG+L++A EFI
Sbjct: 571 TFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISA 630
Query: 566 MPVEPGPAVWGTLLGACKIH-KNTD---IARVASERLFELDPGSVGYYVLLSNIYS-VGR 620
+P P V+G LLG C ++ ++ D IA A+ RL ELDP + +V L N+Y+ +GR
Sbjct: 631 LPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGR 690
Query: 621 NFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAI 668
+ + +E+ K + KTPGC+ + +NG +VF+SGD+S S A +
Sbjct: 691 HDMEKEMRKEMGIK-GVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 200/483 (41%), Gaps = 95/483 (19%)
Query: 119 GMLLHAHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVI 173
G L+HA ++D G + + +SL+ Y K + AR +F+ MPER+ V N ++
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 174 TGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH 233
TG V+ +++ +FR+M N V S TV+ E V + F
Sbjct: 116 TGYVKCRRMNEAWTLFREMPKN---VVSWTVMLTALCDDGRSEDAVEL------FDEMPE 166
Query: 234 RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL 293
R+ LV+ + GD+ A+ +F + D++++NAMI GY N +E + LF ++
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM 226
Query: 294 LVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEI 353
S + T + GYC R ++
Sbjct: 227 -------------------SEKNVVTWTSMVYGYC--------------------RYGDV 247
Query: 354 DMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMM--TTEFTPNPVTITTTLS 411
A +LF E PE+ + +W AMISG+ N L AL LF EM +PN T+ +
Sbjct: 248 REAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAY 307
Query: 412 ACAQLGS--LSFGKWVHQLIKSKNLEP------------NIYVSTAL------------- 444
AC LG G+ +H + S E ++Y S+ L
Sbjct: 308 ACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFD 367
Query: 445 -------IDMYAKCGNISEARQLFDSM-SEKNTVTWNTIIFGYGLHGYGHEALKLFKEML 496
I+ Y K G++ A LF+ + S + V+W ++I GY G A LF++ L
Sbjct: 368 LQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK-L 426
Query: 497 HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQL 556
H GVT+ ++ L E + DMV + ++PL ++ ++ G L
Sbjct: 427 HD---KDGVTWTVMISGLVQNELFAEAASLLSDMV-RCGLKPLNSTYSVLLSSAGATSNL 482
Query: 557 EKA 559
++
Sbjct: 483 DQG 485
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 40/262 (15%)
Query: 330 KSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALS 389
+ G+I+ T+L + Y++ +D AR LF+ PE+ + NAM++GY + A +
Sbjct: 70 QRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWT 129
Query: 390 LFQEMMTTEFTPNPVTITTTLSACAQLGS----------------LSFGKWVHQLIKSKN 433
LF+EM N V+ T L+A G +S+ V LI++ +
Sbjct: 130 LFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGD 184
Query: 434 LEP-----------NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLH 482
+E ++ A+I Y + + EA+ LF MSEKN VTW ++++GY +
Sbjct: 185 MEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRY 244
Query: 483 GYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEH 542
G EA +LF EM I V++ +++ + L RE +F +M K ++ ++ +
Sbjct: 245 GDVREAYRLFCEMPERNI----VSWTAMISGFAWNELYREALMLFLEM--KKDVDAVSPN 298
Query: 543 HACMVDILGRAGQLEKALEFIR 564
++ + G L +EF R
Sbjct: 299 GETLISLAYACGGL--GVEFRR 318
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 442 TALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIH 501
T+L+ YAK G + EAR LF+ M E+N VT N ++ GY +EA LF+EM
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM------ 134
Query: 502 PSG-VTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL 560
P V++ +L A G + E+F +M + + +V L R G +EKA
Sbjct: 135 PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVS-----WNTLVTGLIRNGDMEKAK 189
Query: 561 EFIRTMP 567
+ MP
Sbjct: 190 QVFDAMP 196
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/461 (34%), Positives = 240/461 (52%), Gaps = 38/461 (8%)
Query: 220 GMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTC 279
G I K GF D + L+ L+ KCG +S AR +F + KP L AYN MISGY
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 280 NGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLT----CS-IQGYCVKSGAI 334
+G ++ + L + + SG++ T+ ++ S+ G + C + +K
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 335 SNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQ-- 392
+ + TAL Y + +++ AR +F+ ++ V +MISGY G E A +F
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 393 ------------------------------EMMTTEFTPNPVTITTTLSACAQLGSLSFG 422
M F PN T + + AC+ L S G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 423 KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLH 482
+ VH I + +I + ++L+DMYAKCG I++AR++FD M EKN +W ++I GYG +
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 483 GYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEH 542
G EAL+LF M I P+ VTFL L ACSH+GLV +G EIF M Y ++P EH
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 543 HACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELD 602
+AC+VD++GRAG L KA EF R MP P +W LL +C +H N ++A +A+ LF+L+
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLN 472
Query: 603 PGS-VGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPG 642
G Y+ LSN+Y+ + + IREV K+R+++KT G
Sbjct: 473 ADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIG 513
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 207/444 (46%), Gaps = 45/444 (10%)
Query: 113 SPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTV 172
SP K G +HA I GF +L + L+ L+ K + AR+VFDE+P+ A+N +
Sbjct: 47 SPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYM 106
Query: 173 ITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAE-----LQELGVGMGIQCLA 227
I+G +++ + + + + M +G + D T+ VL A + + +
Sbjct: 107 ISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARI 166
Query: 228 FKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSV 287
K D ++T LV Y K G + +AR +F + +++ +MISGY G +E +
Sbjct: 167 IKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAE 226
Query: 288 KLF-----RELLV----------SGQRVSSST-------MVGLIPVSSPFGHLHLTCS-- 323
++F ++++V SG+ S G P S F + CS
Sbjct: 227 EIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL 286
Query: 324 --------IQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
+ +KSG ++ + ++L +Y++ I+ AR++FD+ EK V +W +MI
Sbjct: 287 TSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
Query: 376 SGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ-LIKSKNL 434
GY +NG E AL LF M PN VT LSAC+ G + G + + + + ++
Sbjct: 347 DGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSM 406
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGYGLHGYGH----EAL 489
+P + ++D+ + G++++A + +M E+ ++ W ++ LHG A
Sbjct: 407 KPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAAS 466
Query: 490 KLFKEMLHSGIHPSGVTFLSILYA 513
+LFK L++ P LS +YA
Sbjct: 467 ELFK--LNADKRPGAYLALSNVYA 488
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 135/312 (43%), Gaps = 41/312 (13%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
+IHA +I G+Q DL KL G +AR +F + P + +N ++ G+ +
Sbjct: 55 KIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHG 114
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLL--------HAHAIVDGFGS 133
+ L + A D YT + + AS M+L HA I
Sbjct: 115 LVKELLLLVQRMSYSGEKA-DGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVF---- 189
+ + ++LVD Y K ++ AR VF+ M + + V ++I+G + + +D+ ++F
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 190 -RDMVANGVQVDS---------------------------TTVVTVLPAVAELQELGVGM 221
+D+V V+ +T +V+ A + L VG
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 222 GIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNG 281
+ K G + + + L+ +Y+KCG I+ AR +F + + ++ ++ +MI GY NG
Sbjct: 294 QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNG 353
Query: 282 EIESSVKLFREL 293
E +++LF +
Sbjct: 354 NPEEALELFTRM 365
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 264/493 (53%), Gaps = 12/493 (2%)
Query: 157 VFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGV-QVDSTTVVTVLPAVAELQ 215
VF+ +P T WN +I G + +++ + M+ G+ + D T V+ +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 216 ELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMIS 275
++ VG + L + GF +D V T V Y KC D+ +AR +FG + + + +++ A++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 276 GYTCNGEIESSVKLFRELLVSGQRVSSSTMV-GLIPVSSPFGHLHLTCSIQGYCVKSGAI 334
Y +GE+E + +F +L+ S + +V GL+ G L + K I
Sbjct: 185 AYVKSGELEEAKSMF-DLMPERNLGSWNALVDGLVKS----GDLVNAKKLFDEMPKRDII 239
Query: 335 SNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEM 394
S T++ Y++ ++ AR LF+E+ V AW+A+I GY QNG A +F EM
Sbjct: 240 S----YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 395 MTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKCGN 453
P+ + +SAC+Q+G + V + + N + YV ALIDM AKCG+
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGH 355
Query: 454 ISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYA 513
+ A +LF+ M +++ V++ +++ G +HG G EA++LF++M+ GI P V F IL
Sbjct: 356 MDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKV 415
Query: 514 CSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA 573
C + LV EG F M KY I +H++C+V++L R G+L++A E I++MP E +
Sbjct: 416 CGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHAS 475
Query: 574 VWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAK 633
WG+LLG C +H NT+IA V + LFEL+P S G YVLLSNIY+ + A +R+
Sbjct: 476 AWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMN 535
Query: 634 KRKLAKTPGCTLI 646
+ + K G + I
Sbjct: 536 ENGITKICGRSWI 548
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 237/504 (47%), Gaps = 37/504 (7%)
Query: 1 MIQRNSIITFIN-----KACNLP-HLAQIHAQLILNGYQSDL-ASITKLTQKLFDFGATR 53
MIQR S + ++ K C HL QIHA++I G + D ++ +
Sbjct: 1 MIQRLSHPSLLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLS 60
Query: 54 HARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLA-PDNYTYAFTIAA 112
++ ++F V +P +L+N L+KG+S ++++ + +RT LA PD YT+ +
Sbjct: 61 YSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRM-MRTGLARPDEYTFPLVMKV 119
Query: 113 SPDD---KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAW 169
++ + G +H + GF ++ V +S VD Y K + ARKVF EMPER+ V+W
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSW 179
Query: 170 NTVITGLVRNCYYDDSIQVF-----RDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQ 224
++ V++ +++ +F R++ + VD L +L
Sbjct: 180 TALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKL---------- 229
Query: 225 CLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIE 284
F RD T ++ Y+K GD+ +AR LF D+ A++A+I GY NG+
Sbjct: 230 ---FDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPN 286
Query: 285 SSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYC-VKSGAISNSSVSTAL 343
+ K+F E+ + MVGL+ S G L + Y + S+ V AL
Sbjct: 287 EAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPAL 346
Query: 344 TTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNP 403
+ ++ +D A KLF+E P++ + ++ +M+ G +G A+ LF++M+ P+
Sbjct: 347 IDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDE 406
Query: 404 VTITTTLSACAQLGSLSFGKWVHQLIKSKN---LEPNIYVSTALIDMYAKCGNISEARQL 460
V T L C Q + G +L++ K P+ Y + ++++ ++ G + EA +L
Sbjct: 407 VAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHY--SCIVNLLSRTGKLKEAYEL 464
Query: 461 FDSMS-EKNTVTWNTIIFGYGLHG 483
SM E + W +++ G LHG
Sbjct: 465 IKSMPFEAHASAWGSLLGGCSLHG 488
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 126/271 (46%), Gaps = 13/271 (4%)
Query: 33 QSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTH 92
+ D+ S T + G AR LF R D+ ++ L+ G++ N P+ + +++
Sbjct: 235 KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 294
Query: 93 LRLRTNLAPDNYTYAFTIAASPD-------DKYGMLLHAHAIVDGFGSNLFVCSSLVDLY 145
+ + N+ PD + ++A +K LH ++ F S+ +V +L+D+
Sbjct: 295 MCAK-NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR--MNKFSSH-YVVPALIDMN 350
Query: 146 FKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVV 205
K + A K+F+EMP+RD V++ +++ G+ + ++I++F MV G+ D
Sbjct: 351 AKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFT 410
Query: 206 TVLPAVAELQELGVGMG-IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIG 263
+L + + + G+ + + K+ + +V+L S+ G + A L+ M
Sbjct: 411 VILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPF 470
Query: 264 KPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
+ A+ +++ G + +G E + + R L
Sbjct: 471 EAHASAWGSLLGGCSLHGNTEIAEVVARHLF 501
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 280 bits (715), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 249/468 (53%), Gaps = 36/468 (7%)
Query: 244 SLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSS 303
S S GD+ A + P +N +I G++ + E S+ ++ ++L G
Sbjct: 50 SALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHM 109
Query: 304 TMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDES 363
T L+ SS + L S+ VKSG + + L +Y + ARKLFDE
Sbjct: 110 TYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEM 169
Query: 364 PEKTVAAWNA-------------------------------MISGYTQNGLTETALSLFQ 392
P K + WN+ MI GY + G AL +F
Sbjct: 170 PHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFD 229
Query: 393 EMMTTEFTP-NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKC 451
+MM + N VT+ + + ACA LG+L+ GK VH+ I +L + + T+LIDMYAKC
Sbjct: 230 QMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKC 289
Query: 452 GNISEARQLF--DSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLS 509
G+I +A +F S+ E + + WN II G HG+ E+L+LF +M S I P +TFL
Sbjct: 290 GSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLC 349
Query: 510 ILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVE 569
+L ACSH GLV+E F + + EP +EH+ACMVD+L RAG ++ A +FI MP++
Sbjct: 350 LLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIK 408
Query: 570 PGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIR 629
P ++ G LL C H N ++A ++L EL P + G YV L+N+Y++ + F A S+R
Sbjct: 409 PTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMR 468
Query: 630 EVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTG 677
E +K+ + K G ++++++GT H F++ D++H H+ IYA+L+ LTG
Sbjct: 469 EAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ-LTG 515
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 189/427 (44%), Gaps = 43/427 (10%)
Query: 16 NLPHLAQIHAQLILNGYQSD--LASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVL 73
++ L +IH LI G + S T L G +A + +P + +N +
Sbjct: 20 SMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFV 79
Query: 74 VKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHAIVDG 130
++GFS + +P SI++Y + LR L PD+ TY F + +S + K G LH + G
Sbjct: 80 IRGFSNSRNPEKSISVYIQM-LRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG 138
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP---------------------------- 162
+LF+C++L+ +Y F ARK+FDEMP
Sbjct: 139 LEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFD 198
Query: 163 ---ERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG-VQVDSTTVVTVLPAVAELQELG 218
ERD V W+++I G V+ Y+ ++++F M+ G + + T+V+V+ A A L L
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALN 258
Query: 219 VGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF--GMIGKPDLIAYNAMISG 276
G + + T L+ +Y+KCG I A +F + + D + +NA+I G
Sbjct: 259 RGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGG 318
Query: 277 YTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISN 336
+G I S++LF ++ S T + L+ S G + +SGA
Sbjct: 319 LASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPK 378
Query: 337 SSVSTALTTIYSRLNEIDMARKLFDESPEK-TVAAWNAMISGYTQNGLTETALSLFQEMM 395
S + + SR + A E P K T + A+++G +G E A ++ ++++
Sbjct: 379 SEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLI 438
Query: 396 TTEFTPN 402
E P+
Sbjct: 439 --ELQPH 443
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/640 (27%), Positives = 313/640 (48%), Gaps = 39/640 (6%)
Query: 23 IHAQLILNGYQSDL-----ASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGF 77
+H +I +GY + SI + K G T A +F + D+ N ++ GF
Sbjct: 311 LHGLVIKSGYSPEAHVSVGNSIISMYSKC---GDTEAAETVFEELVCRDVISSNAILNGF 367
Query: 78 SVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPD---DKYGMLLHAHAIVDGFGSN 134
+ N + + ++ + PD T + D + G +H + + S
Sbjct: 368 AANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSR 427
Query: 135 -LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV 193
L V +S++D+Y K A +F RD V+WN++I+ +N + + +F+++V
Sbjct: 428 ALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV 487
Query: 194 A--NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGD 251
+ + + +TV+ +L + L G + C K GD
Sbjct: 488 SEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCW-------------------LQKLGD 528
Query: 252 ISTARL-LFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ-RVSSSTMVGLI 309
+++A L L M DL ++N++ISG +G S++ F+ + G+ R T++G I
Sbjct: 529 LTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTI 588
Query: 310 PVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVA 369
S G + G +KS ++ + L T+Y R +I+ A K+F + +
Sbjct: 589 SASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLC 648
Query: 370 AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLI 429
+WN +IS +QN LF+ + + PN +T LSA QLGS S+G H +
Sbjct: 649 SWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHL 705
Query: 430 KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEAL 489
+ + N +VS AL+DMY+ CG + ++F + + WN++I +G HG G +A+
Sbjct: 706 IRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAM 765
Query: 490 KLFKEML-HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVD 548
+LFKE+ +S + P+ +F+S+L ACSH+G + EG + M K+ ++P+ EH +VD
Sbjct: 766 ELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVD 825
Query: 549 ILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGY 608
+LGRAG+L +A EFI + VWG LL AC H +T + + +E LFE++P + Y
Sbjct: 826 MLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASY 885
Query: 609 YVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEI 648
Y+ L+N Y + +A +R++ + L K PG ++I++
Sbjct: 886 YISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 196 bits (498), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 152/609 (24%), Positives = 293/609 (48%), Gaps = 36/609 (5%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
+H + G DLA+ +KL G + LF ++ D+ ++N ++ + N
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 83 PSSSIALYTHLRLRTNL--APDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSS 140
+++ L+ + + N + A +++ + +LH AI G + +C++
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228
Query: 141 LVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVD 200
L++LY K + A VF M RD V+WNT++T + N + S+Q F+ M +G + D
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288
Query: 201 STTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG--LVSLYSKCGDISTARLL 258
+ T V+ A + ++EL +G + L K G+ +A+V G ++S+YSKCGD A +
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348
Query: 259 FGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL-VSGQRVSSSTMVGLIPVSSPFGH 317
F + D+I+ NA+++G+ NG E + + ++ V + +T+V + +
Sbjct: 349 FEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSF 408
Query: 318 LHLTCSIQGYCVKSGAISNS-SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMIS 376
++ GY V+ S + V ++ +Y + A LF + + + +WN+MIS
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMIS 468
Query: 377 GYTQNGLTETALSLFQEMMTTEFTPNPVTITTT---LSACAQLGSLSFGKWVHQLIKSKN 433
++QNG T A +LF+E++ +E++ + +++T L++C SL FGK VH ++
Sbjct: 469 AFSQNGFTHKAKNLFKEVV-SEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ--- 524
Query: 434 LEPNIYVSTALIDMYAKCGNISEARQLFDSMSE-KNTVTWNTIIFGYGLHGYGHEALKLF 492
K G+++ A ++MSE ++ +WN++I G G+ E+L+ F
Sbjct: 525 ----------------KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAF 568
Query: 493 KEMLHSG-IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILG 551
+ M G I +T L + A + GLV +G FH + K E + ++ + G
Sbjct: 569 QAMSREGKIRHDLITLLGTISASGNLGLVLQG-RCFHGLAIKSLRELDTQLQNTLITMYG 627
Query: 552 RAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHK-NTDIARVASERLFELDPGSVGYYV 610
R +E A++ + +P W ++ A +K ++ ++ R +L+P + +
Sbjct: 628 RCKDIESAVKVFGLIS-DPNLCSWNCVISALSQNKAGREVFQLF--RNLKLEPNEITFVG 684
Query: 611 LLSNIYSVG 619
LLS +G
Sbjct: 685 LLSASTQLG 693
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 189/433 (43%), Gaps = 34/433 (7%)
Query: 153 LARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVA 212
+ +FDE+PER+ N + S RD VL +
Sbjct: 67 IVHNLFDELPERE-------------NRTMESSFMFLRD---------------VLRSFM 98
Query: 213 ELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNA 272
E + C A K G +D + L++ Y + G++ ++ LF + + D+I +N+
Sbjct: 99 MRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNS 158
Query: 273 MISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG 332
MI+ NG ++V LF E++ G S+T++ S + +++G
Sbjct: 159 MITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETG 218
Query: 333 AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQ 392
+ +SS+ AL +Y++ + A +F + + +WN +++ NG +L F+
Sbjct: 219 LVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFK 278
Query: 393 EMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVS--TALIDMYAK 450
M + + VT + +SAC+ + L+ G+ +H L+ P +VS ++I MY+K
Sbjct: 279 SMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSK 338
Query: 451 CGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH-SGIHPSGVTFLS 509
CG+ A +F+ + ++ ++ N I+ G+ +G EA + +M I P T +S
Sbjct: 339 CGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVS 398
Query: 510 ILYACSHAGLVREGEEIFHDMVNKYRIEPLA-EHHACMVDILGRAGQLEKALEFIRTMPV 568
I C REG + H + ++ A E ++D+ G+ G +A E +
Sbjct: 399 ITSICGDLSFSREGRAV-HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTT 456
Query: 569 EPGPAVWGTLLGA 581
W +++ A
Sbjct: 457 HRDLVSWNSMISA 469
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/558 (29%), Positives = 291/558 (52%), Gaps = 45/558 (8%)
Query: 162 PERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGM 221
P + +NT+I+ + + ++ ++ M+ + V D T + ++ A + L E+
Sbjct: 96 PNPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK--- 150
Query: 222 GIQCLAFKFG-FHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCN 280
I C G Y+ LV Y + G+ A +F + PD+ ++N MI GY
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 281 GEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAI--SNSS 338
G ++KL+ +++ G T++ L+ + L + G+ + G + SN
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 339 VSTALTTIY-------------------------------SRLNEIDMARKLFDESPEKT 367
+S AL +Y RL +++ A+ +FD+ P++
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 368 VAAWNAMISGYTQNGLTE-TALSLFQEMMTTE-FTPNPVTITTTLSACAQLGSLSFGKWV 425
+ +WN+++ GY++ G + T LF EM E P+ VT+ + +S A G LS G+WV
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYG 485
H L+ L+ + ++S+ALIDMY KCG I A +F + +EK+ W ++I G HG G
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNG 450
Query: 486 HEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHAC 545
+AL+LF M G+ P+ VT L++L ACSH+GLV EG +F+ M +K+ +P EH+
Sbjct: 451 QQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGS 510
Query: 546 MVDILGRAGQLEKALEFI-RTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPG 604
+VD+L RAG++E+A + + + MP+ P ++WG++L AC+ ++ + A +A L +L+P
Sbjct: 511 LVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPE 570
Query: 605 SVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPG-CTLIEINGTTHVFVSGDR-SH 662
G YVLLSNIY+ + + RE + R + KT G +++ + G H FV+ ++ +H
Sbjct: 571 KEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEG-LHRFVAAEKQNH 629
Query: 663 SHATAIYAMLEKLTGKMR 680
T I +L+ L +M+
Sbjct: 630 PRWTEIKRILQHLYNEMK 647
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 219/444 (49%), Gaps = 41/444 (9%)
Query: 55 ARALFFSVR-NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS 113
A+ LF + NP++F++N ++ +V++S + LY+ + +R ++PD T+ + + AS
Sbjct: 87 AKLLFLNFTPNPNVFVYNTMIS--AVSSSKNECFGLYSSM-IRHRVSPDRQTFLYLMKAS 143
Query: 114 PDDKYGMLLHAHAIVDGFGS-NLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTV 172
+H H IV G S ++ +SLV Y + G+A KVF MP D ++N +
Sbjct: 144 SFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVM 203
Query: 173 ITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFG- 231
I G + + ++++++ MV++G++ D TV+++L L ++ +G G+ + G
Sbjct: 204 IVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGP 263
Query: 232 -FHRDAYVLTGLVSLYSKC-------------------------------GDISTARLLF 259
+ + + L+ +Y KC GD+ A+ +F
Sbjct: 264 VYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVF 323
Query: 260 GMIGKPDLIAYNAMISGYTCNGEIESSVK-LFREL-LVSGQRVSSSTMVGLIPVSSPFGH 317
+ K DL+++N+++ GY+ G + +V+ LF E+ +V + TMV LI ++ G
Sbjct: 324 DQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGE 383
Query: 318 LHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISG 377
L + G ++ ++ +S+AL +Y + I+ A +F + EK VA W +MI+G
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 378 YTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEP 436
+G + AL LF M TPN VT+ L+AC+ G + G V +K K +P
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 437 NIYVSTALIDMYAKCGNISEARQL 460
+L+D+ + G + EA+ +
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDI 527
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 173/385 (44%), Gaps = 58/385 (15%)
Query: 251 DISTARLLF-GMIGKPDLIAYNAMISGYT-----CNGEIESSVKLFRELLVSGQRVS--S 302
++ A+LLF P++ YN MIS + C G S ++ RVS
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIR---------HRVSPDR 133
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAIS-NSSVSTALTTIYSRLNEIDMARKLFD 361
T + L+ SS + I + + SG +S + + +L Y L +A K+F
Sbjct: 134 QTFLYLMKASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFA 190
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
P V+++N MI GY + G + AL L+ +M++ P+ T+ + L C L +
Sbjct: 191 RMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRL 250
Query: 422 GKWVHQLIKSKN--LEPNIYVSTALIDMYAKC---------------------------- 451
GK VH I+ + N+ +S AL+DMY KC
Sbjct: 251 GKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGF 310
Query: 452 ---GNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALK-LFKEM-LHSGIHPSGVT 506
G++ A+ +FD M +++ V+WN+++FGY G ++ LF EM + + P VT
Sbjct: 311 VRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVT 370
Query: 507 FLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
+S++ ++ G + G + H +V + +++ A + ++D+ + G +E+A +T
Sbjct: 371 MVSLISGAANNGELSHGRWV-HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT- 428
Query: 567 PVEPGPAVWGTLLGACKIHKNTDIA 591
E A+W +++ H N A
Sbjct: 429 ATEKDVALWTSMITGLAFHGNGQQA 453
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/528 (22%), Positives = 223/528 (42%), Gaps = 86/528 (16%)
Query: 4 RNSIITFINKACNLPHLAQIHAQLILNGYQSD----LASITKLTQKLFDFGATRHARALF 59
R + + + + L + QIH +I++G S S+ K +L +FG A +F
Sbjct: 133 RQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGV---AEKVF 189
Query: 60 FSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDD 116
+ +PD+ FNV++ G++ ++ LY + + + PD YT + D
Sbjct: 190 ARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM-VSDGIEPDEYTVLSLLVCCGHLSDI 248
Query: 117 KYGMLLHAHAIVDG--FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVIT 174
+ G +H G + SNL + ++L+D+YFK GLA++ FD M ++D +WNT++
Sbjct: 249 RLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVV 308
Query: 175 GLVRNCYYDDSIQVF-----RDMVA----------------------------NGVQVDS 201
G VR + + VF RD+V+ V+ D
Sbjct: 309 GFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR 368
Query: 202 TTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGM 261
T+V+++ A EL G + L + DA++ + L+ +Y KCG I A ++F
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT 428
Query: 262 IGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLT 321
+ D+ + +MI+G +G + +++LF + G ++ T++ ++
Sbjct: 429 ATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTA---------- 478
Query: 322 CSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQN 381
C SG + L+ + + F PE + +++ +
Sbjct: 479 ------CSHSGLVEEG------------LHVFNHMKDKFGFDPE--TEHYGSLVDLLCRA 518
Query: 382 GLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKW-VHQLIKSKNLEPNIYV 440
G E A + Q+ M P+ + LSAC + + + +L+K LEP
Sbjct: 519 GRVEEAKDIVQKKMPMR--PSQSMWGSILSACRGGEDIETAELALTELLK---LEPEKEG 573
Query: 441 STALI-DMYAKCGNI---SEARQLFDSMSEKNTVTWNTIIFGYGLHGY 484
L+ ++YA G + R+ ++ K T +++++ GLH +
Sbjct: 574 GYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRF 621
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 248/459 (54%), Gaps = 33/459 (7%)
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS-------------- 296
D++ A L+F I + +N +I G++ + E ++ +F ++L S
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 297 -------GQRVSSSTMVGLIP---------VSSPFGHLHLTCS--IQGYCVKSGAISNSS 338
GQ + G++ + + H+++TC I+ + + G I
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 339 VS-TALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT 397
V+ ++ +++ ID A+ LFDE P++ +WN+MISG+ +NG + AL +F+EM
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 398 EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
+ P+ T+ + L+ACA LG+ G+W+H+ I E N V TALIDMY KCG I E
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 458 RQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHA 517
+F+ +K WN++I G +G+ A+ LF E+ SG+ P V+F+ +L AC+H+
Sbjct: 313 LNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHS 372
Query: 518 GLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGT 577
G V +E F M KY IEP +H+ MV++LG AG LE+A I+ MPVE +W +
Sbjct: 373 GEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSS 432
Query: 578 LLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKL 637
LL AC+ N ++A+ A++ L +LDP YVLLSN Y+ F +A R + K+R++
Sbjct: 433 LLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQM 492
Query: 638 AKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLT 676
K GC+ IE++ H F+S +H + IY++L+ L
Sbjct: 493 EKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILN 531
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 134/548 (24%), Positives = 236/548 (43%), Gaps = 86/548 (15%)
Query: 5 NSIITFINKACN-LPHLAQIHAQLILNGYQSDLASITK-LTQKLFDFGATRHARALFFSV 62
N+ + I+ C+ + L QIHA LI G SD + ++ L +A +F +
Sbjct: 25 NTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRI 84
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRT-NLAPDNYTYAFTIAASP---DDKY 118
+ + F++N +++GFS ++ P +I+++ + + ++ P TY A +
Sbjct: 85 NHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARD 144
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLY----------------------------FKFSR 150
G LH I +G + F+ ++++ +Y F++
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 151 VGL---ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTV 207
GL A+ +FDEMP+R+ V+WN++I+G VRN + D++ +FR+M V+ D T+V++
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 208 LPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDL 267
L A A L G I + F ++ V+T L+ +Y KCG I +F K L
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 268 IAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGY 327
+N+MI G NG E ++ LF EL SG S + +G++
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA---------------- 368
Query: 328 CVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETA 387
C SG + + + + E M E ++ + M++ GL E A
Sbjct: 369 CAHSGEVHRAD------EFFRLMKEKYMI--------EPSIKHYTLMVNVLGGAGLLEEA 414
Query: 388 LSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI-D 446
+L + M E T V ++ LSAC ++G++ K + + K L+P+ L+ +
Sbjct: 415 EALIKNMPVEEDT---VIWSSLLSACRKIGNVEMAKRAAKCL--KKLDPDETCGYVLLSN 469
Query: 447 MYAKCGNISEA---RQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPS 503
YA G EA R L + V ++I + +H + + G HP
Sbjct: 470 AYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEF----------ISCGGTHPK 519
Query: 504 GVTFLSIL 511
S+L
Sbjct: 520 SAEIYSLL 527
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 232/434 (53%), Gaps = 22/434 (5%)
Query: 250 GDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF-----RELLVSGQRVSSST 304
G I++A +F + + +++ + +MI+GY N ++ S+ + F R++++ +S
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 305 MVG-LIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDES 363
+G ++ S F + + V G Y+ + +++ ++FD+
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEG--------------YANIGDMEACERVFDDM 147
Query: 364 PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT-EFTPNPVTITTTLSACAQLGSLSFG 422
PE+ V +WN +I GY QNG L F+ M+ PN T+T LSACA+LG+ FG
Sbjct: 148 PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG 207
Query: 423 KWVHQLIKSKNLEP-NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
KWVH+ ++ ++ V ALIDMY KCG I A ++F + ++ ++WNT+I G
Sbjct: 208 KWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAA 267
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAE 541
HG+G EAL LF EM +SGI P VTF+ +L AC H GLV +G F+ M + I P E
Sbjct: 268 HGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIE 327
Query: 542 HHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFEL 601
H C+VD+L RAG L +A+EFI MPV+ +W TLLGA K++K DI VA E L +L
Sbjct: 328 HCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKL 387
Query: 602 DPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRS 661
+P + +V+LSNIY F AA ++ + K G + IE + F S
Sbjct: 388 EPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEK 447
Query: 662 HSHATAIYAMLEKL 675
H + +L +L
Sbjct: 448 HPRTEELQRILREL 461
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 10/270 (3%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT 109
G A +F + ++ L+ ++ G+ +N S+ R +L+P+ +
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSA-------RRYFDLSPERDIVLWN 94
Query: 110 IAASPDDKYGMLLHAHAIVDGFG-SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVA 168
S + G +L A ++ D ++ +++++ Y + +VFD+MPER+ +
Sbjct: 95 TMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFS 154
Query: 169 WNTVITGLVRNCYYDDSIQVFRDMVANGVQV-DSTTVVTVLPAVAELQELGVGMGIQCLA 227
WN +I G +N + + F+ MV G V + T+ VL A A+L G +
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 228 FKFGFHR-DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESS 286
G+++ D V L+ +Y KCG I A +F I + DLI++N MI+G +G +
Sbjct: 215 ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEA 274
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFG 316
+ LF E+ SG T VG++ G
Sbjct: 275 LNLFHEMKNSGISPDKVTFVGVLCACKHMG 304
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 89/180 (49%), Gaps = 4/180 (2%)
Query: 35 DLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLR 94
D+ S + + + G +F + ++F +N L+KG++ N S + + +
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 95 LRTNLAPDNYTYAFTIAASPD---DKYGMLLHAHAIVDGFGS-NLFVCSSLVDLYFKFSR 150
++ P++ T ++A +G +H + G+ ++ V ++L+D+Y K
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 151 VGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPA 210
+ +A +VF + RD ++WNT+I GL + + +++ +F +M +G+ D T V VL A
Sbjct: 240 IEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCA 299
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/530 (31%), Positives = 269/530 (50%), Gaps = 8/530 (1%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
+H + + G + F S L+ + + A +F+ + + +NT+I G +
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
+ + VF + A G+ +D + +T L + + + +G G+ +A + GF +
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNA 165
Query: 242 LVSLYSKCGDISTARLLFG-MIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRV 300
L+ Y CG IS AR +F M D + ++ +++GY + ++ LFR + S V
Sbjct: 166 LIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVV 225
Query: 301 SSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF 360
+ ST++ + S G L S C+K G + + TAL +Y + I AR++F
Sbjct: 226 NVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF 285
Query: 361 DESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLS 420
D + K V WN MI Y + GL E + L ++M + PN T LS+CA +
Sbjct: 286 DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAF 345
Query: 421 FGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYG 480
G+ V L++ + + + + TAL+DMYAK G + +A ++F+ M +K+ +W +I GYG
Sbjct: 346 VGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYG 405
Query: 481 LHGYGHEALKLFKEMLHSG--IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEP 538
HG EA+ LF +M + P+ +TFL +L ACSH GLV EG F MV Y P
Sbjct: 406 AHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTP 465
Query: 539 LAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERL 598
EH+ C+VD+LGRAGQLE+A E IR +P+ W LL AC+++ N D+ RL
Sbjct: 466 KVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRL 525
Query: 599 FELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEI 648
E+ +LL+ ++V N P+ + E+ K RK A G + IEI
Sbjct: 526 AEMGETHPADAILLAGTHAVAGN-PEKSLDNELNKGRKEA---GYSAIEI 571
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/549 (25%), Positives = 275/549 (50%), Gaps = 24/549 (4%)
Query: 3 QRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLT--QKLFDFGATRHARALFF 60
Q +I + + +++IH ++ G D +++KL + D R+A ++F
Sbjct: 27 QCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDI---RYASSIFE 83
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---K 117
V N ++F+FN +++G+S++ P + +++ LR + L D +++ T+ + +
Sbjct: 84 HVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAK-GLTLDRFSFITTLKSCSRELCVS 142
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER-DTVAWNTVITGL 176
G LH A+ GF + ++L+ Y ++ ARKVFDEMP+ D V ++T++ G
Sbjct: 143 IGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGY 202
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
++ ++ +FR M + V V+ +T+++ L A+++L +L L K G D
Sbjct: 203 LQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDL 262
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
+++T L+ +Y K G IS+AR +F + D++ +N MI Y G +E V L R++
Sbjct: 263 HLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE 322
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
+ +SST VGL+ + + ++ + ++ + TAL +Y+++ ++ A
Sbjct: 323 KMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKA 382
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEM--MTTEFTPNPVTITTTLSACA 414
++F+ +K V +W AMISGY +GL A++LF +M + PN +T L+AC+
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Query: 415 QLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTW 472
G + G + +++++ + P + ++D+ + G + EA +L ++ ++ W
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAW 502
Query: 473 NTIIFG---YGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHD 529
++ YG G + EM + HP+ +IL A +HA + E+ +
Sbjct: 503 RALLAACRVYGNADLGESVMMRLAEMGET--HPAD----AILLAGTHA-VAGNPEKSLDN 555
Query: 530 MVNKYRIEP 538
+NK R E
Sbjct: 556 ELNKGRKEA 564
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 275 bits (703), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 263/493 (53%), Gaps = 7/493 (1%)
Query: 154 ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAE 213
ARK+FD PER WN++I + + + +F ++ + + D+ T + +E
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE 118
Query: 214 LQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAM 273
+ I +A G D + +V YSK G I A LF I PDL +N M
Sbjct: 119 SFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVM 178
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
I GY C G + + LF + G + + TMV L L + S+ +C+K
Sbjct: 179 ILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINL 238
Query: 334 ISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQE 393
S+S V AL +YSR I A +F+ E + A +++I+GY++ G + AL LF E
Sbjct: 239 DSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAE 298
Query: 394 MMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGN 453
+ + P+ V + L +CA+L GK VH + LE +I V +ALIDMY+KCG
Sbjct: 299 LRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGL 358
Query: 454 ISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYA 513
+ A LF + EKN V++N++I G GLHG+ A + F E+L G+ P +TF ++L
Sbjct: 359 LKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCT 418
Query: 514 CSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM--PVEPG 571
C H+GL+ +G+EIF M +++ IEP EH+ MV ++G AG+LE+A EF+ ++ P++ G
Sbjct: 419 CCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSG 478
Query: 572 PAVWGTLLGACKIHKNTDIARVASERLFE--LDPGSVGYYVLLSNIYSVGRNFPKAASIR 629
+ G LL C++H+NT +A V +E + + + SV Y V+LSN+Y+ + + +R
Sbjct: 479 --ILGALLSCCEVHENTHLAEVVAENIHKNGEERRSV-YKVMLSNVYARYGRWDEVERLR 535
Query: 630 EVAKKRKLAKTPG 642
+ + K PG
Sbjct: 536 DGISESYGGKLPG 548
Score = 169 bits (429), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 208/421 (49%), Gaps = 15/421 (3%)
Query: 55 ARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT---IA 111
AR LF +FL+N +++ ++ ++ ++L++ + LR++ PDN+TYA +
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQI-LRSDTRPDNFTYACLARGFS 117
Query: 112 ASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNT 171
S D K +H AIV G G + S++V Y K + A K+F +P+ D WN
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 172 VITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFG 231
+I G ++D I +F M G Q + T+V + + + L V + K
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN 237
Query: 232 FHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFR 291
+YV LV++YS+C I++A +F I +PDL+A +++I+GY+ G + ++ LF
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 292 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQG-----YCVKSGAISNSSVSTALTTI 346
EL +SG++ +V ++ S L+ S+ G Y ++ G + V +AL +
Sbjct: 298 ELRMSGKK-PDCVLVAIVLGSCA----ELSDSVSGKEVHSYVIRLGLELDIKVCSALIDM 352
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
YS+ + A LF PEK + ++N++I G +G TA F E++ P+ +T
Sbjct: 353 YSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITF 412
Query: 407 TTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
+ L C G L+ G+ + + +KS+ +EP ++ + G + EA + S+
Sbjct: 413 SALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQ 472
Query: 466 E 466
+
Sbjct: 473 K 473
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 192/450 (42%), Gaps = 37/450 (8%)
Query: 20 LAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSV 79
L IH I++G D + + + G A LF S+ +PD+ L+NV++ G+
Sbjct: 125 LRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGC 184
Query: 80 NASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGML---LHAHAIVDGFGSNLF 136
I L+ ++ R + P+ YT + D ++ +HA + S+ +
Sbjct: 185 CGFWDKGINLFNLMQHRGH-QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSY 243
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANG 196
V +LV++Y + + A VF+ + E D VA +++ITG R + +++ +F ++ +G
Sbjct: 244 VGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSG 303
Query: 197 VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTAR 256
+ D V VL + AEL + G + + G D V + L+ +YSKCG + A
Sbjct: 304 KKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAM 363
Query: 257 LLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFG 316
LF I + +++++N++I G +G ++ + F E+L +GLIP F
Sbjct: 364 SLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEIL----------EMGLIPDEITFS 413
Query: 317 HLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMIS 376
L TC G K I+ R+ + F P+ + +
Sbjct: 414 ALLCTCCHSGLLNKG------------QEIFERM------KSEFGIEPQTEHYVYMVKLM 455
Query: 377 GYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
G G E A F+ +M+ + + + LS C + + V + I E
Sbjct: 456 GMA--GKLEEA---FEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEER 510
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSE 466
L ++YA+ G E +L D +SE
Sbjct: 511 RSVYKVMLSNVYARYGRWDEVERLRDGISE 540
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 321 TCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQ 380
T + + KS + +T L Y+ +++ ARKLFD PE++V WN++I Y +
Sbjct: 24 TQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAK 83
Query: 381 NGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG-SLSFG----KWVHQLIKSKNLE 435
T LSLF +++ ++ P+ T AC G S SF + +H + L
Sbjct: 84 AHQFTTVLSLFSQILRSDTRPDNFTY-----ACLARGFSESFDTKGLRCIHGIAIVSGLG 138
Query: 436 PNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM 495
+ +A++ Y+K G I EA +LF S+ + + WN +I GYG G+ + + LF M
Sbjct: 139 FDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Query: 496 LHSGIHPSGVTFLSI 510
H G P+ T +++
Sbjct: 199 QHRGHQPNCYTMVAL 213
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 242/429 (56%), Gaps = 12/429 (2%)
Query: 252 ISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPV 311
I+ R L+ + KPD + ++ ++ ++ +++V G S + GLI
Sbjct: 101 ITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLI-- 158
Query: 312 SSPFGHLHLTCSIQGYCVK---SGAISNSSVSTALTTIYSRLNEIDMARKLFDESP--EK 366
++ +C G K + + +V AL Y ++ E+D AR L + P +
Sbjct: 159 -----QMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVR 213
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH 426
+W +ISGY ++G A+ +FQ M+ P+ VT+ LSACA LGSL G+ +
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 427 QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGH 486
+ + + + ++ A+IDMYAK GNI++A +F+ ++E+N VTW TII G HG+G
Sbjct: 274 SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGA 333
Query: 487 EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACM 546
EAL +F M+ +G+ P+ VTF++IL ACSH G V G+ +F+ M +KY I P EH+ CM
Sbjct: 334 EALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393
Query: 547 VDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSV 606
+D+LGRAG+L +A E I++MP + A+WG+LL A +H + ++ A L +L+P +
Sbjct: 394 IDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNS 453
Query: 607 GYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHAT 666
G Y+LL+N+YS + ++ +R + K + K G + IE+ + F+SGD +H
Sbjct: 454 GNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVE 513
Query: 667 AIYAMLEKL 675
I+ +L+++
Sbjct: 514 RIHEILQEM 522
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 214/494 (43%), Gaps = 86/494 (17%)
Query: 16 NLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVK 75
NL L Q H +I+ G D ++ K + + G R+A ++F P+ +L N +++
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 76 GFSVNASPSS-SIALYTHLRLRTNLA-PDNYTYAFTIAAS---PDDKYGMLLHAHAIVDG 130
S+ P++ SIA+ + +L A PD +T+ F + + D +G +H +V G
Sbjct: 87 ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG 146
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT------------------------ 166
F S++ V + L+ +YF +G ARK+FDEM +D
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLE 206
Query: 167 ---------VAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQEL 217
V+W VI+G ++ ++I+VF+ M+ V+ D T++ VL A A+L L
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL 266
Query: 218 GVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGY 277
+G I G +R + ++ +Y+K G+I+ A +F + + +++ + +I+G
Sbjct: 267 ELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGL 326
Query: 278 TCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNS 337
+G ++ +F ++ +G R + T + ++ CS G+
Sbjct: 327 ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILS----------ACSHVGW---------- 366
Query: 338 SVSTALTTIYSRLNEIDMARKLFDESPEK-----TVAAWNAMISGYTQNGLTETALSLFQ 392
+D+ ++LF+ K + + MI + G A + +
Sbjct: 367 ---------------VDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Query: 393 EMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALI-DMYAK 450
M F N + L+A L G + + +LIK LEPN + L+ ++Y+
Sbjct: 412 SM---PFKANAAIWGSLLAASNVHHDLELGERALSELIK---LEPNNSGNYMLLANLYSN 465
Query: 451 CGNISEARQLFDSM 464
G E+R + + M
Sbjct: 466 LGRWDESRMMRNMM 479
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 387 ALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALID 446
A+++++++ P+ T L ++ + FG+ +H + + +++V T LI
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 447 MYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYG-------------------------- 480
MY CG + +AR++FD M K+ WN ++ GYG
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 481 --LHGYGH-----EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
+ GY EA+++F+ ML + P VT L++L AC+ G + GE I V+
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC-SYVDH 278
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARV 593
+ + ++D+ ++G + KAL+ + E W T++ H + A
Sbjct: 279 RGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGAEALA 337
Query: 594 ASERLFE--LDPGSVGYYVLLSNIYSVG 619
R+ + + P V + +LS VG
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVG 365
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 273 bits (699), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 189/655 (28%), Positives = 319/655 (48%), Gaps = 24/655 (3%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSV-R 63
N++++ + NL L + ++ + D+ S T L F G +A +F +
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEI----DEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE 151
Query: 64 NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGM 120
D+ ++N ++ G + +S+ L+ + + + D + +A TI + D +G
Sbjct: 152 RDDVAIWNAMITGCKESGYHETSVELFREMH-KLGVRHDKFGFA-TILSMCDYGSLDFGK 209
Query: 121 LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDE--MPERDTVAWNTVITGLVR 178
+H+ I GF V ++L+ +YF V A VF+E + RD V +N VI GL
Sbjct: 210 QVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA- 268
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
D+S+ VFR M+ ++ T V+V+ + + +G + LA K G+ + V
Sbjct: 269 GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCA---AMGHQVHGLAIKTGYEKYTLV 325
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
+++YS D A +F + + DL+ +N MIS Y +S++ +++ + + G
Sbjct: 326 SNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+ T L+ S L + +Q +K G S +S AL + YS+ +I+ A
Sbjct: 386 KPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADL 442
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE--FTPNPVTITTTLSACAQL 416
LF+ S K + +WNA+ISG+ NG L F ++ +E P+ T++T LS C
Sbjct: 443 LFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVST 502
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTII 476
SL G H + + ALI+MY++CG I + ++F+ MSEK+ V+WN++I
Sbjct: 503 SSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLI 562
Query: 477 FGYGLHGYGHEALKLFKEMLHSG-IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYR 535
Y HG G A+ +K M G + P TF ++L ACSHAGLV EG EIF+ MV +
Sbjct: 563 SAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHG 622
Query: 536 IEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA--VWGTLLGACKIHKNTDIARV 593
+ +H +C+VD+LGRAG L++A ++ G VW L AC H + + ++
Sbjct: 623 VIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKM 682
Query: 594 ASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEI 648
++ L E + YV LSNIY+ + +A R K GC+ + +
Sbjct: 683 VAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 250/557 (44%), Gaps = 53/557 (9%)
Query: 70 FNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHA 126
N + G + + +++ L+ + T L PD Y+ + I + D +G +H +A
Sbjct: 24 LNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYA 83
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDE-------------------------- 160
I G + V ++L+ LY + + +K FDE
Sbjct: 84 IRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAF 143
Query: 161 -----MPERDTVA-WNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAEL 214
MPERD VA WN +ITG + Y++ S+++FR+M GV+ D T+L ++ +
Sbjct: 144 EVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDY 202
Query: 215 QELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGM--IGKPDLIAYNA 272
L G + L K GF + V+ L+++Y C + A L+F + D + +N
Sbjct: 203 GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNV 262
Query: 273 MISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS--PFGHLHLTCSIQGYCVK 330
+I G + + S+ +FR++L + R + T V ++ S GH + G +K
Sbjct: 263 VIDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGH-----QVHGLAIK 316
Query: 331 SGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSL 390
+G + VS A T+YS + A K+F+ EK + WN MIS Y Q L ++A+S+
Sbjct: 317 TGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 391 FQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAK 450
++ M P+ T + L+ L L V I L I +S ALI Y+K
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSK 433
Query: 451 CGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIH--PSGVTFL 508
G I +A LF+ KN ++WN II G+ +G+ E L+ F +L S + P T
Sbjct: 434 NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLS 493
Query: 509 SILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPV 568
++L C + G + ++ + + +A ++++ + G ++ +LE M
Sbjct: 494 TLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNA-LINMYSQCGTIQNSLEVFNQMS- 551
Query: 569 EPGPAVWGTLLGACKIH 585
E W +L+ A H
Sbjct: 552 EKDVVSWNSLISAYSRH 568
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 43/291 (14%)
Query: 267 LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC---S 323
L+ N ++G T +GE +++KLF ++ V L ++ HL T
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTAR--HLRDTIFGGQ 78
Query: 324 IQGYCVKSGAISNSSVSTALTTIYSR-------------------------------LNE 352
+ Y ++SG + +S VS L ++Y R L +
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 353 IDMARKLFDESPEK-TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
I+ A ++FD+ PE+ VA WNAMI+G ++G ET++ LF+EM + T LS
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 412 ACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD--SMSEKNT 469
C GSL FGK VH L+ V ALI MY C + +A +F+ ++ ++
Sbjct: 199 MC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 470 VTWNTIIFGYGLHGYGH-EALKLFKEMLHSGIHPSGVTFLSILYACSHAGL 519
VT+N +I GL G+ E+L +F++ML + + P+ +TF+S++ +CS A +
Sbjct: 258 VTFNVVI--DGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 33/186 (17%)
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEM-MTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
T+ N ++G T++G AL LF ++ T P+ +++ ++ L FG V
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQV 79
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISE----------------------------- 456
H L + +VS L+ +Y + GN++
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 457 --ARQLFDSMSEKNTVT-WNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYA 513
A ++FD M E++ V WN +I G GY +++LF+EM G+ F +IL
Sbjct: 140 EYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSM 199
Query: 514 CSHAGL 519
C + L
Sbjct: 200 CDYGSL 205
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 272 bits (696), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 220/421 (52%), Gaps = 3/421 (0%)
Query: 271 NAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVK 330
+ + G G ++ +V L L SG +V T L+ I
Sbjct: 80 DKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFV 136
Query: 331 SGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSL 390
G N + L +Y+ ++ A LF + + WNAMISGY Q GL + L +
Sbjct: 137 VGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFI 196
Query: 391 FQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAK 450
+ +M P+ T + AC+ L L GK H ++ + ++ NI V +AL+DMY K
Sbjct: 197 YYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFK 256
Query: 451 CGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSI 510
C + S+ ++FD +S +N +TW ++I GYG HG E LK F++M G P+ VTFL +
Sbjct: 257 CSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVV 316
Query: 511 LYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEP 570
L AC+H GLV +G E F+ M Y IEP +H+A MVD LGRAG+L++A EF+ P +
Sbjct: 317 LTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKE 376
Query: 571 GPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIRE 630
P VWG+LLGAC+IH N + +A+ + ELDP + G YV+ +N Y+ A+ +R
Sbjct: 377 HPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRR 436
Query: 631 VAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVT 690
+ + K PG + IE+ G H F+ D SH + IY + ++T +I Y + +
Sbjct: 437 KMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPDGLD 496
Query: 691 S 691
S
Sbjct: 497 S 497
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 144/324 (44%), Gaps = 7/324 (2%)
Query: 163 ERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG 222
+R T + + GL +++ + + ++G+QV+ T +L + +E G
Sbjct: 73 QRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKR 129
Query: 223 IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
I F GF + Y+ L+ LY+ GD+ TA +LF + DLI +NAMISGY G
Sbjct: 130 IHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGL 189
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA 342
+ + ++ ++ + T + S L +K SN V +A
Sbjct: 190 EQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSA 249
Query: 343 LTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
L +Y + + ++FD+ + V W ++ISGY +G L F++M PN
Sbjct: 250 LVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPN 309
Query: 403 PVTITTTLSACAQLGSLSFGKWVH--QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQ- 459
PVT L+AC G + G W H + + +EP A++D + G + EA +
Sbjct: 310 PVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEF 368
Query: 460 LFDSMSEKNTVTWNTIIFGYGLHG 483
+ S +++ W +++ +HG
Sbjct: 369 VMKSPCKEHPPVWGSLLGACRIHG 392
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 4/192 (2%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
+IHAQ+ + G+ + KL G + A LF S++ D+ +N ++ G+
Sbjct: 129 RIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKG 188
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYA--FTIAASPDD-KYGMLLHAHAIVDGFGSNLFVC 138
+ +Y +R + + PD YT+A F ++ D ++G HA I SN+ V
Sbjct: 189 LEQEGLFIYYDMR-QNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVD 247
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
S+LVD+YFK S +VFD++ R+ + W ++I+G + + ++ F M G +
Sbjct: 248 SALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCR 307
Query: 199 VDSTTVVTVLPA 210
+ T + VL A
Sbjct: 308 PNPVTFLVVLTA 319
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 7/236 (2%)
Query: 74 VKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK---YGMLLHAHAIVDG 130
+KG V ++ L + L + TYA + K G +HA V G
Sbjct: 83 LKGLCVTGRLKEAVGLL----WSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVG 138
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFR 190
F N ++ L+ LY + A +F + RD + WN +I+G V+ + + ++
Sbjct: 139 FALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYY 198
Query: 191 DMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
DM N + D T +V A + L L G + K + V + LV +Y KC
Sbjct: 199 DMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS 258
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMV 306
S +F + ++I + ++ISGY +G++ +K F ++ G R + T +
Sbjct: 259 SFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFL 314
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 250/468 (53%), Gaps = 38/468 (8%)
Query: 252 ISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPV 311
I A +F I + D+I+ A+I + + + F+ LL G R + T +I
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 312 SSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDES-------- 363
S+ + L + Y +K G SN V +A+ Y +L+ + AR+ FD++
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 364 -----------------------PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFT 400
PE++V WNA+I G++Q G E A++ F +M+
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 401 -PNPVTITTTLSACAQLGSLSFGKWVHQL-IKSKNLEPNIYVSTALIDMYAKCGNISEAR 458
PN T ++A + + S GK +H IK N++V +LI Y+KCGN+ ++
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 459 QLFDSMSE--KNTVTWNTIIFGYGLHGYGHEALKLFKEMLH-SGIHPSGVTFLSILYACS 515
F+ + E +N V+WN++I+GY +G G EA+ +F++M+ + + P+ VT L +L+AC+
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 516 HAGLVREGEEIFHDMVNKYRIEPLAE--HHACMVDILGRAGQLEKALEFIRTMPVEPGPA 573
HAGL++EG F+ VN Y L E H+ACMVD+L R+G+ ++A E I++MP++PG
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 574 VWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAK 633
W LLG C+IH N +A++A+ ++ ELDP V YV+LSN YS N+ + IR K
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 634 KRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMRE 681
+ L + GC+ IE+ VFV+ D+++ +Y ML ++ + E
Sbjct: 463 ETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEE 510
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 172/388 (44%), Gaps = 55/388 (14%)
Query: 38 SITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRT 97
SI +L + + D R+A +F + D+ ++ F + + + L L
Sbjct: 30 SIPELVKHI-DSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRL-LCL 87
Query: 98 NLAPDNYTYAFTIAASP---DDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLA 154
+ P+ +T+ I +S D K G LH +A+ G SN+FV S++++ Y K S + A
Sbjct: 88 GIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDA 147
Query: 155 RKVFDE-------------------------------MPERDTVAWNTVITGLVRNCYYD 183
R+ FD+ MPER V WN VI G + +
Sbjct: 148 RRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNE 207
Query: 184 DSIQVFRDMVANGVQV-DSTTVVTVLPAVAELQELGVGMGIQCLAFKF-GFHRDAYVLTG 241
+++ F DM+ GV + + +T + A++ + G G I A KF G + +V
Sbjct: 208 EAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNS 267
Query: 242 LVSLYSKCGDISTARLLFGMIGKP--DLIAYNAMISGYTCNGEIESSVKLFRELLV-SGQ 298
L+S YSKCG++ + L F + + +++++N+MI GY NG E +V +F +++ +
Sbjct: 268 LISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNL 327
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTAL--------TTIYSRL 350
R ++ T++G++ F H +GY + A+++ L + SR
Sbjct: 328 RPNNVTILGVL-----FACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRS 382
Query: 351 NEIDMARKLFDESP-EKTVAAWNAMISG 377
A +L P + + W A++ G
Sbjct: 383 GRFKEAEELIKSMPLDPGIGFWKALLGG 410
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 29/243 (11%)
Query: 335 SNSSVSTALTTIYSRLNEIDM-----ARKLFDESPEKTVAAWNAMISGYTQNGLTETALS 389
+N+ V+ + +I + ID A K+FDE PE V + A+I + + A
Sbjct: 20 ANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQ 79
Query: 390 LFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYA 449
F+ ++ PN T T + + + GK +H L N++V +A+++ Y
Sbjct: 80 AFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYV 139
Query: 450 KCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLS 509
K +++AR+ FD + N V+ +I GY EAL LF+ M + VT+ +
Sbjct: 140 KLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNA 195
Query: 510 ILYACSHAGLVREGEEIFHDMVNKYRIEP--------------LAEH------HACMVDI 549
++ S G E F DM+ + + P +A H HAC +
Sbjct: 196 VIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKF 255
Query: 550 LGR 552
LG+
Sbjct: 256 LGK 258
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 35 DLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLR 94
++ SIT L A +LF ++ + +N ++ GFS ++ + +
Sbjct: 158 NVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 95 LRTNLAPDNYTYAFTIAASPD---DKYGMLLHAHAI-VDGFGSNLFVCSSLVDLYFKFSR 150
+ P+ T+ I A + G +HA AI G N+FV +SL+ Y K
Sbjct: 218 REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN 277
Query: 151 VGLARKVFDEMPE--RDTVAWNTVITGLVRNCYYDDSIQVFRDMVAN-GVQVDSTTVVTV 207
+ + F+++ E R+ V+WN++I G N ++++ +F MV + ++ ++ T++ V
Sbjct: 278 MEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGV 337
Query: 208 LPA 210
L A
Sbjct: 338 LFA 340
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 180/669 (26%), Positives = 300/669 (44%), Gaps = 103/669 (15%)
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
K G L H +I G + LV+LY K + AR VFDEM ER+ +WN VI
Sbjct: 5 KDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAY 64
Query: 177 VR--------------NCYYD-------------------DSIQVFRDM---VANGVQVD 200
V+ NC D ++I++F +M + + +D
Sbjct: 65 VKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWID 124
Query: 201 STTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF- 259
TV T++ A+L + G + + K G + ++ L+ +YSKCG +F
Sbjct: 125 DFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFN 184
Query: 260 ----------------------GMIGKP-----------DLIAYNAMISGYTCNGEIESS 286
G I K D I++N +I+GY NG E +
Sbjct: 185 GSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEA 244
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
+K+ + +G + + ++ V S L + + +K+G+ SN VS+ + +
Sbjct: 245 LKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDV 304
Query: 347 YSRLNEIDMA-------------------------------RKLFDESPEKTVAAWNAMI 375
Y + + A ++LFD EK + W AM
Sbjct: 305 YCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMF 364
Query: 376 SGYTQNGLTETALSLFQEMMTTEF-TPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNL 434
GY ++ L L + + E TP+ + + + L AC+ + GK +H +
Sbjct: 365 LGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI 424
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKE 494
+ + TA +DMY+KCGN+ A ++FDS E++TV +N +I G HG+ ++ + F++
Sbjct: 425 LMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFED 484
Query: 495 MLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG 554
M G P +TF+++L AC H GLV EGE+ F M+ Y I P H+ CM+D+ G+A
Sbjct: 485 MTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAY 544
Query: 555 QLEKALEFIRTM-PVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLS 613
+L+KA+E + + VE + G L AC +KNT++ + E+L ++ + Y+ ++
Sbjct: 545 RLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIA 604
Query: 614 NIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLE 673
N Y+ + + IR + ++L GC+ I+ H+F S D SH AIYAML
Sbjct: 605 NAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLH 664
Query: 674 KLTGKMREI 682
+T + EI
Sbjct: 665 FVTKDLSEI 673
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 3/164 (1%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT 109
G A+ LF S+ ++ ++ + G+ P S + L PD+
Sbjct: 340 GKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSV 399
Query: 110 IAASPDDKY---GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT 166
+ A Y G +H H++ G + + ++ VD+Y K V A ++FD ERDT
Sbjct: 400 LGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDT 459
Query: 167 VAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPA 210
V +N +I G + + S Q F DM G + D T + +L A
Sbjct: 460 VMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 213/353 (60%), Gaps = 4/353 (1%)
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
+K G IS+ + ++L +Y E++ A K+F+E PE+ V +W AMISG+ Q + L
Sbjct: 147 LKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICL 206
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMY 448
L+ +M + PN T T LSAC G+L G+ VH L+ +++S +LI MY
Sbjct: 207 KLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMY 266
Query: 449 AKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML-HSGIHPSGVTF 507
KCG++ +A ++FD S K+ V+WN++I GY HG +A++LF+ M+ SG P +T+
Sbjct: 267 CKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITY 326
Query: 508 LSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP 567
L +L +C HAGLV+EG + F +++ ++ ++P H++C+VD+LGR G L++ALE I MP
Sbjct: 327 LGVLSSCRHAGLVKEGRKFF-NLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMP 385
Query: 568 VEPGPAVWGTLLGACKIHKNTDIA-RVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAA 626
++P +WG+LL +C++H + R A ERL L+P +V L+N+Y+ + +AA
Sbjct: 386 MKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM-LEPDCAATHVQLANLYASVGYWKEAA 444
Query: 627 SIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKM 679
++R++ K + L PGC+ IEIN +F + D S+ I +L L M
Sbjct: 445 TVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHM 497
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 154/303 (50%), Gaps = 6/303 (1%)
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
D S V RD G D+ + + + + ++ G G CLA K GF D Y+ + L
Sbjct: 106 DSSSSVKRD----GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSL 161
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
V LY G++ A +F + + +++++ AMISG+ ++ +KL+ ++ S +
Sbjct: 162 VVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPND 221
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
T L+ + G L S+ + G S +S +L ++Y + ++ A ++FD+
Sbjct: 222 YTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQ 281
Query: 363 SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFT-PNPVTITTTLSACAQLGSLSF 421
K V +WN+MI+GY Q+GL A+ LF+ MM T P+ +T LS+C G +
Sbjct: 282 FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKE 341
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGYG 480
G+ L+ L+P + + L+D+ + G + EA +L ++M K N+V W +++F
Sbjct: 342 GRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCR 401
Query: 481 LHG 483
+HG
Sbjct: 402 VHG 404
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 156/344 (45%), Gaps = 19/344 (5%)
Query: 115 DDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVIT 174
D + G H A+ GF S++++ SSLV LY V A KVF+EMPER+ V+W +I+
Sbjct: 135 DFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMIS 194
Query: 175 GLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHR 234
G + D ++++ M + + T +L A LG G + C G
Sbjct: 195 GFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKS 254
Query: 235 DAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
++ L+S+Y KCGD+ A +F D++++N+MI+GY +G +++LF EL+
Sbjct: 255 YLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELF-ELM 313
Query: 295 V--SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
+ SG + + T +G++ G + + G + + L + R
Sbjct: 314 MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGL 373
Query: 353 IDMARKLFDESPEKTVAA-WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
+ A +L + P K + W +++ +G T + +E + E P T +
Sbjct: 374 LQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLE----PDCAATHV- 428
Query: 412 ACAQLGSL--SFGKW-----VHQLIKSKNLEPNIYVSTALIDMY 448
QL +L S G W V +L+K K L+ N S I+ Y
Sbjct: 429 ---QLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNY 469
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 127/278 (45%), Gaps = 6/278 (2%)
Query: 23 IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNAS 82
H + G+ SD+ + L D G +A +F + ++ + ++ GF+
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWR 201
Query: 83 PSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLLHAHAIVDGFGSNLFVCS 139
+ LY+ +R T+ P++YT+ ++A G +H + G S L + +
Sbjct: 202 VDICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISN 260
Query: 140 SLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMV-ANGVQ 198
SL+ +Y K + A ++FD+ +D V+WN++I G ++ +I++F M+ +G +
Sbjct: 261 SLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTK 320
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA-RL 257
D+ T + VL + + G L + G + + LV L + G + A L
Sbjct: 321 PDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALEL 380
Query: 258 LFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
+ M KP+ + + +++ +G++ + ++ E L+
Sbjct: 381 IENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM 418
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 379 TQNGLTETALSLFQEMMTTE---------FTPNPVTITTTLSACAQLGSLSFGKWVHQLI 429
T+NG++ S+ +E+M + ++ + +++ + +C G H L
Sbjct: 91 TKNGVS----SVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLA 146
Query: 430 KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEAL 489
++Y+ ++L+ +Y G + A ++F+ M E+N V+W +I G+ L
Sbjct: 147 LKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICL 206
Query: 490 KLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
KL+ +M S P+ TF ++L AC+ +G + +G +
Sbjct: 207 KLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSV 243
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 262 bits (669), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 199/330 (60%), Gaps = 12/330 (3%)
Query: 338 SVSTALTTIYSRLNEIDMARKLFDESPEK-TVAAWNAMISGYTQNGLTETALSLFQEMMT 396
+ T+L YS + ++D AR++FDE+PEK + W AMIS YT+N + A+ LF+ M
Sbjct: 101 QIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEA 160
Query: 397 TEFTPNPVTITTTLSACAQLGSLSFGKWVHQ--LIKSKNLEPNIYVSTALIDMYAKCGNI 454
+ + V +T LSACA LG++ G+ ++ + + + L ++ + +L++MY K G
Sbjct: 161 EKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGET 220
Query: 455 SEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM------LHSGIHPSGVTFL 508
+AR+LFD K+ T+ ++IFGY L+G E+L+LFK+M + I P+ VTF+
Sbjct: 221 EKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFI 280
Query: 509 SILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPV 568
+L ACSH+GLV EG+ F M+ Y ++P H CMVD+ R+G L+ A EFI MP+
Sbjct: 281 GVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPI 340
Query: 569 EPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASI 628
+P +W TLLGAC +H N ++ R+FELD VG YV LSNIY+ + + + +
Sbjct: 341 KPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKM 400
Query: 629 REVAKKRKLAKTPGCTLIEINGTTHVFVSG 658
R+ +KR++ PG + IE+ + FVSG
Sbjct: 401 RDRVRKRRM---PGKSWIELGSIINEFVSG 427
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 152/331 (45%), Gaps = 19/331 (5%)
Query: 220 GMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMI-GKPDLIAYNAMISGYT 278
G I L K GF+ + T LV YS GD+ AR +F K +++ + AMIS YT
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 279 CNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA--ISN 336
N +++LF+ + + + + + G + + I +K +
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 337 SSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMT 396
++ +L +Y + E + ARKLFDES K V + +MI GY NG + +L LF++M T
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 397 ------TEFTPNPVTITTTLSACAQLGSLSFGKW-VHQLIKSKNLEPNIYVSTALIDMYA 449
T TPN VT L AC+ G + GK +I NL+P ++D++
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 450 KCGNISEARQLFDSMSEK-NTVTWNTIIFGYGLHG---YGHEALKLFKEMLHSGIHPSGV 505
+ G++ +A + + M K NTV W T++ LHG G E + E+ H
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRD--HVGDY 381
Query: 506 TFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
LS +YA G+ E ++ D V K R+
Sbjct: 382 VALSNIYASK--GMWDEKSKM-RDRVRKRRM 409
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 176/405 (43%), Gaps = 42/405 (10%)
Query: 71 NVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGML--LHAHAIV 128
N +K + + P ++ + H ++ D+++ F I S K L HA+V
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 129 D--GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER-DTVAWNTVITGLVRNCYYDDS 185
GF + + + +SLV Y V AR+VFDE PE+ + V W +I+ N ++
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI--QCLAFKFGFHRDAYVLTGLV 243
I++F+ M A +++D V L A A+L + +G I + + K D + L+
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLL 211
Query: 244 SLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSS 303
++Y K G+ AR LF + D+ Y +MI GY NG+ + S++LF+++ + + S
Sbjct: 212 NMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM----KTIDQS 267
Query: 304 TMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDES 363
+ P F + + CS G V+ G S+ + D +
Sbjct: 268 QDTVITPNDVTFIGVLMACSHSG-LVEEGKRHFKSM-------------------IMDYN 307
Query: 364 PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGK 423
+ A + M+ + ++G + A +M PN V T L AC+ G++ G+
Sbjct: 308 LKPREAHFGCMVDLFCRSGHLKDAHEFINQM---PIKPNTVIWRTLLGACSLHGNVELGE 364
Query: 424 WVHQLIKSKNLE--------PNIYVSTALIDMYAKCGNISEARQL 460
V + I + + NIY S + D +K + R++
Sbjct: 365 EVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM 409
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Query: 412 ACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTV 470
+ AQ S G+ +H L++ I + T+L+ Y+ G++ ARQ+FD EK N V
Sbjct: 74 SSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIV 133
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIF-HD 529
W +I Y + EA++LFK M I GV L AC+ G V+ GEEI+
Sbjct: 134 LWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRS 193
Query: 530 MVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
+ K R+ ++++ ++G+ EKA
Sbjct: 194 IKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 258 bits (660), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 179/611 (29%), Positives = 297/611 (48%), Gaps = 18/611 (2%)
Query: 44 QKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDN 103
+L G A F + D+ +N+L+ G S +I LY + + L
Sbjct: 54 DELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEM-VSCGLRESA 112
Query: 104 YTYAFTIAASPDDKY---GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDE 160
T+ ++ D+ + G+ +H I GFG N+FV S+LV LY V +A K+FDE
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 161 MPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVG 220
M +R+ N ++ + +V+ M GV + T ++ + + + G
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 221 MGIQCLAFKFGFH-RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTC 279
+ L K G++ + +V LV YS CGD+S + F + + D+I++N+++S
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 280 NGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG-AISNSS 338
G + S+ LF ++ G+R S + + S + I Y +K G +S+
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 339 VSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE 398
V +AL +Y + N I+ + L+ P + N++++ G+T+ + +F M+
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEG 412
Query: 399 FTPNPVTITTTLSACAQLGSLSFGKWVHQL-------IKSKNLEPNIYVSTALIDMYAKC 451
+ VT++T L A SLS + +H IKS ++ VS +LID Y K
Sbjct: 413 TGIDEVTLSTVLKAL----SLSLPESLHSCTLVHCCAIKS-GYAADVAVSCSLIDAYTKS 467
Query: 452 GNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSIL 511
G +R++FD + N +II GY +G G + +K+ +EM + P VT LS+L
Sbjct: 468 GQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVL 527
Query: 512 YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPG 571
CSH+GLV EGE IF + +KY I P + +ACMVD+LGRAG +EKA + +
Sbjct: 528 SGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDAD 587
Query: 572 PAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREV 631
W +LL +C+IH+N I R A+E L L+P + Y+ +S Y +F + IRE+
Sbjct: 588 CVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREI 647
Query: 632 AKKRKLAKTPG 642
A R+L + G
Sbjct: 648 AASRELMREIG 658
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 174/376 (46%), Gaps = 2/376 (0%)
Query: 142 VDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDS 201
+D K + A + FDEM RD V +N +I+G R +I+++ +MV+ G++ +
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 202 TTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGM 261
+T +VL ++ G+ + C GF + +V + LV LY+ + A LF
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 262 IGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLT 321
+ +L N ++ + GE + +++ + + G + T +I S ++
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 322 CSIQGYCVKSG-AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQ 380
+ VKSG ISN V+ L YS ++ + + F+ PEK V +WN+++S
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 381 NGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE-PNIY 439
G +L LF +M P+ + L+ C++ + GK +H + + +++
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
V +ALIDMY KC I + L+ S+ N N+++ G + +++F M+ G
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEG 412
Query: 500 IHPSGVTFLSILYACS 515
VT ++L A S
Sbjct: 413 TGIDEVTLSTVLKALS 428
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 431 SKNLEPN----IYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGH 486
S LE N +Y ID K GN+ A + FD MS ++ VT+N +I G +G
Sbjct: 35 SSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSL 94
Query: 487 EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
A++L+ EM+ G+ S TF S+L CS REG ++
Sbjct: 95 RAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQV 134
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 237/435 (54%), Gaps = 9/435 (2%)
Query: 206 TVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKP 265
++L L+ + G+ + L + + + + LV LY+ CG A +F + K
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 266 D--LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCS 323
D A+N++ISGY G+ E ++ L+ ++ G + T ++ G + + +
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 324 IQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGL 383
I VK G + V AL +Y++ +I AR +FD P K +WN+M++GY +GL
Sbjct: 217 IHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGL 276
Query: 384 TETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTA 443
AL +F+ M+ P+ V I++ L A++ S G+ +H + + +E + V+ A
Sbjct: 277 LHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANA 333
Query: 444 LIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPS 503
LI +Y+K G + +A +FD M E++TV+WN II H LK F++M + P
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQMHRANAKPD 390
Query: 504 GVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFI 563
G+TF+S+L C++ G+V +GE +F M +Y I+P EH+ACMV++ GRAG +E+A I
Sbjct: 391 GITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMI 450
Query: 564 -RTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNF 622
+ M +E GP VWG LL AC +H NTDI VA++RLFEL+P + + LL IYS +
Sbjct: 451 VQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRA 510
Query: 623 PKAASIREVAKKRKL 637
+R++ R L
Sbjct: 511 EDVERVRQMMVDRGL 525
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 182/356 (51%), Gaps = 11/356 (3%)
Query: 133 SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT--VAWNTVITGLVRNCYYDDSIQVFR 190
+NL + S LV LY +A +VFD M +RD+ AWN++I+G Y+D++ ++
Sbjct: 125 NNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYF 184
Query: 191 DMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
M +GV+ D T VL A + + +G I K GF D YVL LV +Y+KCG
Sbjct: 185 QMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCG 244
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
DI AR +F MI D +++N+M++GY +G + ++ +FR ++ +G + ++
Sbjct: 245 DIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA 304
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA 370
F H + G+ ++ G SV+ AL +YS+ ++ A +FD+ E+ +
Sbjct: 305 RVLSFKH---GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVS 361
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLI- 429
WNA+IS +++N L F++M P+ +T + LS CA G + G+ + L+
Sbjct: 362 WNAIISAHSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMS 418
Query: 430 KSKNLEPNIYVSTALIDMYAKCGNISEARQLF--DSMSEKNTVTWNTIIFGYGLHG 483
K ++P + ++++Y + G + EA + + E W +++ LHG
Sbjct: 419 KEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHG 474
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 196/445 (44%), Gaps = 47/445 (10%)
Query: 33 QSDLASITKLTQKLFDFGATRHARALF--FSVRNPDIFLFNVLVKGFSVNASPSSSIALY 90
+++L +KL + G A +F S R+ F +N L+ G++ ++ALY
Sbjct: 124 RNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY 183
Query: 91 THLRLRTNLAPDNYTYAFTIAASP---DDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFK 147
+ + PD +T+ + A + G +H + +GFG +++V ++LV +Y K
Sbjct: 184 FQM-AEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK 242
Query: 148 FSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTV 207
+ AR VFD +P +D V+WN+++TG + + +++ +FR MV NG++ D + +V
Sbjct: 243 CGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSV 302
Query: 208 LPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDL 267
L V + G + + G + V L+ LYSK G + A +F + + D
Sbjct: 303 LARVLSFKH---GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDT 359
Query: 268 IAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGY 327
+++NA+IS ++ N + +K F ++ + + T V S+
Sbjct: 360 VSWNAIISAHSKNS---NGLKYFEQMHRANAKPDGITFV----------------SVLSL 400
Query: 328 CVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETA 387
C +G + + L ++ S+ ID + + M++ Y + G+ E A
Sbjct: 401 CANTGMVEDGE---RLFSLMSKEYGID-----------PKMEHYACMVNLYGRAGMMEEA 446
Query: 388 LSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP-NIYVSTALID 446
S+ + M E P L AC G+ G+ Q + LEP N + LI
Sbjct: 447 YSMIVQEMGLE--AGPTVWGALLYACYLHGNTDIGEVAAQ--RLFELEPDNEHNFELLIR 502
Query: 447 MYAKCGNISEARQLFDSMSEKNTVT 471
+Y+K + ++ M ++ T
Sbjct: 503 IYSKAKRAEDVERVRQMMVDRGLET 527
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
P + L C L ++ G VH LI L N+ +S+ L+ +YA CG A ++FD
Sbjct: 92 PEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFD 151
Query: 463 SMSEKNT--VTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLV 520
MS++++ WN++I GY G +A+ L+ +M G+ P TF +L AC G V
Sbjct: 152 RMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSV 211
Query: 521 REGEEIFHDMVNK---YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGT 577
+ GE I D+V + Y + L +V + + G + KA +P W +
Sbjct: 212 QIGEAIHRDLVKEGFGYDVYVL----NALVVMYAKCGDIVKARNVFDMIP-HKDYVSWNS 266
Query: 578 LLGA----CKIHKNTDIARVASERLFELD 602
+L +H+ DI R+ + E D
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEPD 295
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 257 bits (656), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 260/523 (49%), Gaps = 45/523 (8%)
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYF---KFSRVGLARKVFDEMPERDTVAWNTVITGLVRN 179
HA + G + F S LV + V A + + + + N+VI +
Sbjct: 59 HAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANS 118
Query: 180 CYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVL 239
+ ++ VFR+M+ V D + VL A A G I L K G D +V
Sbjct: 119 STPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVE 178
Query: 240 TGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR 299
LV++Y + G AR + + D +++N+++S Y G ++ + LF E+ +
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM--EERN 236
Query: 300 VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKL 359
V S + I GY +G + A+++
Sbjct: 237 VESWNFM-----------------ISGYAA-AGLVKE-------------------AKEV 259
Query: 360 FDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMM--TTEFTPNPVTITTTLSACAQLG 417
FD P + V +WNAM++ Y G L +F +M+ +TE P+ T+ + LSACA LG
Sbjct: 260 FDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE-KPDGFTLVSVLSACASLG 318
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIF 477
SLS G+WVH I +E +++TAL+DMY+KCG I +A ++F + S+++ TWN+II
Sbjct: 319 SLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIIS 378
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
+HG G +AL++F EM++ G P+G+TF+ +L AC+H G++ + ++F M + YR+E
Sbjct: 379 DLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVE 438
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASER 597
P EH+ CMVD+LGR G++E+A E + +P + + +LLGACK + A + R
Sbjct: 439 PTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANR 498
Query: 598 LFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKT 640
L EL+ Y +SN+Y+ + K R + ++ ++
Sbjct: 499 LLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 251/521 (48%), Gaps = 58/521 (11%)
Query: 7 IITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATR-------HARALF 59
I++F +A +L + Q HA ++ G D S +KL F AT +A ++
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVA----FAATNPEPKTVSYAHSIL 97
Query: 60 FSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDD 116
+ +P+ F N +++ ++ +++P ++ ++ + L + PD Y++ F + AA
Sbjct: 98 NRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGF 156
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
+ G +H I G +++FV ++LV++Y + +ARKV D MP RD V+WN++++
Sbjct: 157 EEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAY 216
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+ D++ +F +M V+ ++ F
Sbjct: 217 LEKGLVDEARALFDEMEERNVE----------------------------SWNF------ 242
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLV- 295
++S Y+ G + A+ +F + D++++NAM++ Y G +++F ++L
Sbjct: 243 -----MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDD 297
Query: 296 SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDM 355
S ++ T+V ++ + G L + Y K G ++TAL +YS+ +ID
Sbjct: 298 STEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDK 357
Query: 356 ARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQ 415
A ++F + ++ V+ WN++IS + +GL + AL +F EM+ F PN +T LSAC
Sbjct: 358 ALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH 417
Query: 416 LGSLSFGKWVHQLIKS-KNLEPNIYVSTALIDMYAKCGNISEARQLFDSM-SEKNTVTWN 473
+G L + + +++ S +EP I ++D+ + G I EA +L + + +++ ++
Sbjct: 418 VGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLE 477
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIH-PSGVTFLSILYA 513
+++ G +A ++ +L + SG +S LYA
Sbjct: 478 SLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYA 518
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 10/223 (4%)
Query: 391 FQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYA- 449
++M TP P+ LS + SL+ + H + L + + ++ L+ A
Sbjct: 29 LKKMSVCSSTPVPI-----LSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAAT 83
Query: 450 --KCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
+ +S A + + + N T N++I Y AL +F+EML + P +F
Sbjct: 84 NPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSF 143
Query: 508 LSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP 567
+L AC+ EG +I H + K + +V++ GR+G E A + + MP
Sbjct: 144 TFVLKACAAFCGFEEGRQI-HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP 202
Query: 568 VEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYV 610
V + W +LL A D AR + + E + S + +
Sbjct: 203 VRDAVS-WNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMI 244
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 219/441 (49%), Gaps = 36/441 (8%)
Query: 242 LVSLYSKCGDIST---ARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
L S CG +S A +F I P+++ +NAMI Y+ G S+ F + G
Sbjct: 39 LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI 98
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
T L+ S L + G +++G + + +Y+ + A+K
Sbjct: 99 WADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQK 158
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTE-------------------------------TA 387
+FDE E+ V WN MI G+ +G E A
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 388 LSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPN-IYVSTALID 446
L LF EM+ F P+ T+ T L A LG L GKW+H +S L + I V AL+D
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 447 MYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG-IHPSGV 505
Y K G++ A +F M +N V+WNT+I G ++G G + LF M+ G + P+
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Query: 506 TFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRT 565
TFL +L CS+ G V GEE+F M+ ++++E EH+ MVD++ R+G++ +A +F++
Sbjct: 339 TFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKN 398
Query: 566 MPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKA 625
MPV A+WG+LL AC+ H + +A VA+ L +++PG+ G YVLLSN+Y+ +
Sbjct: 399 MPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDV 458
Query: 626 ASIREVAKKRKLAKTPGCTLI 646
+R + KK +L K+ G + I
Sbjct: 459 EKVRTLMKKNRLRKSTGQSTI 479
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 195/422 (46%), Gaps = 47/422 (11%)
Query: 19 HLAQIHAQLI---LNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVK 75
L +IHA L+ L+G LA + L + + +A +F ++NP++ +FN ++K
Sbjct: 19 RLPEIHAHLLRHFLHGSNLLLAHFISICGSLSN---SDYANRVFSHIQNPNVLVFNAMIK 75
Query: 76 GFSVNASPSSSIALYTHLRLRTNLAPDNYTYA---FTIAASPDDKYGMLLHAHAIVDGFG 132
+S+ P S++ ++ ++ R + D YTYA + ++ D ++G +H I GF
Sbjct: 76 CYSLVGPPLESLSFFSSMKSR-GIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFH 134
Query: 133 SNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL---------------- 176
+ +V+LY R+G A+KVFDEM ER+ V WN +I G
Sbjct: 135 RLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQM 194
Query: 177 --------------VRNCYYD-DSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGM 221
+ C D +++++F +M+ G D TVVTVLP A L L G
Sbjct: 195 SERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGK 254
Query: 222 GIQCLAFKFGFHRDAYVLTG--LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTC 279
I A G +D ++ G LV Y K GD+ A +F + + +++++N +ISG
Sbjct: 255 WIHSTAESSGLFKD-FITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAV 313
Query: 280 NGEIESSVKLFRELLVSGQRV-SSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAI-SNS 337
NG+ E + LF ++ G+ + +T +G++ S G + + G ++ + + +
Sbjct: 314 NGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEART 373
Query: 338 SVSTALTTIYSRLNEIDMARKLFDESPEKTVAA-WNAMISGYTQNGLTETALSLFQEMMT 396
A+ + SR I A K P AA W +++S +G + A E++
Sbjct: 374 EHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK 433
Query: 397 TE 398
E
Sbjct: 434 IE 435
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 174/403 (43%), Gaps = 47/403 (11%)
Query: 122 LHAHAIVDGF-GSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNC 180
+HAH + GSNL + + + + S A +VF + + + +N +I C
Sbjct: 23 IHAHLLRHFLHGSNLLL-AHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMI-----KC 76
Query: 181 YYD-----DSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
Y +S+ F M + G+ D T +L + + L +L G + + GFHR
Sbjct: 77 YSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRL 136
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFR---- 291
+ G+V LY+ G + A+ +F + + +++ +N MI G+ +G++E + LF+
Sbjct: 137 GKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSE 196
Query: 292 ---------------------------ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSI 324
E++ G +T+V ++P+S+ G L I
Sbjct: 197 RSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWI 256
Query: 325 QGYCVKSGAISN-SSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGL 383
SG + +V AL Y + +++ A +F + + V +WN +ISG NG
Sbjct: 257 HSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGK 316
Query: 384 TETALSLFQEMMTT-EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYVS 441
E + LF M+ + PN T L+ C+ G + G+ + L+ + LE
Sbjct: 317 GEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHY 376
Query: 442 TALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHG 483
A++D+ ++ G I+EA + +M N W +++ HG
Sbjct: 377 GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 169/582 (29%), Positives = 281/582 (48%), Gaps = 87/582 (14%)
Query: 6 SIITFINKACNLPHLAQIHAQLILNG---YQSDLAS-ITKLTQKLFDFGATRHARALFFS 61
S+ ++A P L QIHAQLI+ QS AS I +L + + R +F S
Sbjct: 8 SLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLR--APSYYTRLIFDS 65
Query: 62 VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGML 121
V P++F+ N + K FS + + LY R R + PD +++ I ++ ++G+L
Sbjct: 66 VTFPNVFVVNSMFKYFSKMDMANDVLRLYEQ-RSRCGIMPDAFSFPVVIKSA--GRFGIL 122
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
A GF + +V + ++D+Y K V ARKVFD++ +R WN +I+G +
Sbjct: 123 FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGN 182
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
+++ ++F M N D T
Sbjct: 183 KEEACKLFDMMPEN---------------------------------------DVVSWTV 203
Query: 242 LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
+++ ++K D+ AR F + + ++++NAM+SGY NG E +++LF ++L G R +
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI--------------- 346
+T V +I S LT S+ + N V TAL +
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 347 -----------------YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALS 389
Y+R+ ++ AR+LFD P++ V +WN++I+GY NG A+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 390 LFQEMMTT-EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMY 448
F++M+ + P+ VT+ + LSAC + L G + I+ ++ N +LI MY
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMY 443
Query: 449 AKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFL 508
A+ GN+ EA+++FD M E++ V++NT+ + +G G E L L +M GI P VT+
Sbjct: 444 ARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYT 503
Query: 509 SILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDIL 550
S+L AC+ AGL++EG+ IF + N PLA+H+ACM D+L
Sbjct: 504 SVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 201/439 (45%), Gaps = 80/439 (18%)
Query: 155 RKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAEL 214
R +FD + + N++ + +D ++++ G+ D+ + V+ +
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF 119
Query: 215 QELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMI 274
G+ Q L K GF +D YV ++ +Y K + +AR +F I + +N MI
Sbjct: 120 -----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 275 SGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAI 334
SGY G E + KLF ++P
Sbjct: 175 SGYWKWGNKEEACKLF----------------DMMP------------------------ 194
Query: 335 SNSSVS-TALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQE 393
N VS T + T ++++ +++ ARK FD PEK+V +WNAM+SGY QNG TE AL LF +
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 394 MMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKC-- 451
M+ PN T +SAC+ S + + +LI K + N +V TAL+DM+AKC
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD 314
Query: 452 ------------------------------GNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
G++S ARQLFD+M ++N V+WN++I GY
Sbjct: 315 IQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAH 374
Query: 482 HGYGHEALKLFKEMLHSG-IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLA 540
+G A++ F++M+ G P VT +S+L AC H + G+ I D + K +I+
Sbjct: 375 NGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIV-DYIRKNQIKLND 433
Query: 541 EHHACMVDILGRAGQLEKA 559
+ ++ + R G L +A
Sbjct: 434 SGYRSLIFMYARGGNLWEA 452
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/450 (31%), Positives = 242/450 (53%), Gaps = 39/450 (8%)
Query: 227 AFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESS 286
+ KFG D V + L+S+Y KCG + +AR +F + + ++ +NAMI GY NG+ +
Sbjct: 72 SIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLA 131
Query: 287 VKLFRELLVSGQRVSSSTMVG-------LIPVSSPFGHLHLTC-SIQGYCVKSGAI---- 334
LF E+ V V+ M+ + F + +++ + V G
Sbjct: 132 SGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNR 191
Query: 335 --------------SNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQ 380
N+ V + + + Y R+ ++ AR +F + + WN +I+GY Q
Sbjct: 192 KMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQ 251
Query: 381 NGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYV 440
NG ++ A+ F M + P+ VT+++ LSACAQ G L G+ VH LI + +E N +V
Sbjct: 252 NGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFV 311
Query: 441 STALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGI 500
S ALIDMYAKCG++ A +F+S+S ++ N++I +HG G EAL++F M +
Sbjct: 312 SNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDL 371
Query: 501 HPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL 560
P +TF+++L AC H G + EG +IF +M + ++P +H C++ +LGR+G+L++A
Sbjct: 372 KPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAY 430
Query: 561 EFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFEL--DPGSV------GYYVLL 612
++ M V+P V G LLGACK+H +T++A E++ ++ GS+ + +
Sbjct: 431 RLVKEMHVKPNDTVLGALLGACKVHMDTEMA----EQVMKIIETAGSITNSYSENHLASI 486
Query: 613 SNIYSVGRNFPKAASIREVAKKRKLAKTPG 642
SN+Y+ + A ++R +KR L K+PG
Sbjct: 487 SNLYAHTERWQTAEALRVEMEKRGLEKSPG 516
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 188/423 (44%), Gaps = 28/423 (6%)
Query: 73 LVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS--PDDKYGMLLHAHAIVDG 130
L+K SP ++ LY +R R P A P G LLH+ +I G
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFG 76
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRN------CYYDD 184
S++ V SSL+ +Y K V ARKVFDEMPER+ WN +I G + N +
Sbjct: 77 VCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFE 136
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQE---------------LGVGMGIQCLAFK 229
I V R+ V + + EL E LGV + + +
Sbjct: 137 EISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDA 196
Query: 230 FGFHRD-----AYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIE 284
F D A+V + ++S Y + GD+ AR +F + DL+ +N +I+GY NG +
Sbjct: 197 RKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSD 256
Query: 285 SSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALT 344
++ F + G + T+ ++ + G L + + G N VS AL
Sbjct: 257 DAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALI 316
Query: 345 TIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
+Y++ +++ A +F+ ++VA N+MIS +G + AL +F M + + P+ +
Sbjct: 317 DMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEI 376
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
T L+AC G L G + +K+++++PN+ LI + + G + EA +L M
Sbjct: 377 TFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Query: 465 SEK 467
K
Sbjct: 437 HVK 439
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 31/308 (10%)
Query: 14 ACNLPHLAQ---IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLF 70
AC +P + +H++ I G SD+ + L G AR +F + ++ +
Sbjct: 56 ACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATW 115
Query: 71 NVLVKGFSVNASPSSSIALYTHLRLRTNLAP---------------------DNYTYAFT 109
N ++ G+ N + L+ + + N + +
Sbjct: 116 NAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK 175
Query: 110 IAASPDDKYGMLLHAHAIVDGFG-------SNLFVCSSLVDLYFKFSRVGLARKVFDEMP 162
+ G+ ++ + D N FV S ++ YF+ V AR +F +
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 163 ERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG 222
RD V WNT+I G +N Y DD+I F +M G + D+ TV ++L A A+ L VG
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 223 IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
+ L G + +V L+ +Y+KCGD+ A +F I + N+MIS +G+
Sbjct: 296 VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGK 355
Query: 283 IESSVKLF 290
+ ++++F
Sbjct: 356 GKEALEMF 363
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 403 PVTITTTLSACA-QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
P + L ACA + + GK +H + ++ V ++LI MY KCG + AR++F
Sbjct: 45 PGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVF 104
Query: 462 DSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
D M E+N TWN +I GY +G A LF+E+ + + VT++ ++ +
Sbjct: 105 DEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIE 161
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
+ E+F M + ++ + + + M+ + ++E A +F +P E VW ++
Sbjct: 162 KARELFERM--PFELKNV-KAWSVMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMMSG 217
Query: 582 CKIHKNTDIARVASERLFELD 602
+ AR R+F D
Sbjct: 218 YFRIGDVHEARAIFYRVFARD 238
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 124/275 (45%), Gaps = 5/275 (1%)
Query: 47 FDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTY 106
F G ARA+F+ V D+ ++N L+ G++ N +I + +++ PD T
Sbjct: 219 FRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ-GEGYEPDAVTV 277
Query: 107 AFTIAA-SPDDKYGMLLHAHAIVD--GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPE 163
+ ++A + + + H++++ G N FV ++L+D+Y K + A VF+ +
Sbjct: 278 SSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISV 337
Query: 164 RDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI 223
R N++I+ L + +++++F M + ++ D T + VL A L G+ I
Sbjct: 338 RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKI 397
Query: 224 QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIGKPDLIAYNAMISGYTCNGE 282
+ L+ L + G + A RL+ M KP+ A++ + +
Sbjct: 398 FSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMD 457
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGH 317
E + ++ + + +G +S + L +S+ + H
Sbjct: 458 TEMAEQVMKIIETAGSITNSYSENHLASISNLYAH 492
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 223/409 (54%), Gaps = 3/409 (0%)
Query: 240 TGLVSLYSKCGDI-STARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF-RELLVSG 297
+ LV YSK + T+ +F + ++ ++N +I ++ +G S+ LF R S
Sbjct: 70 SKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESC 129
Query: 298 QRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMAR 357
R T+ ++ S I C+K G S+ VS+AL +Y + ++ AR
Sbjct: 130 VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHAR 189
Query: 358 KLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
KLFD+ P + + AM GY Q G L++F+EM + F + V + + L AC QLG
Sbjct: 190 KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLG 249
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIF 477
+L GK VH + + + A+ DMY KC + A +F +MS ++ ++W+++I
Sbjct: 250 ALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLIL 309
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
GYGL G + KLF EML GI P+ VTFL +L AC+H GLV E ++ ++ +Y I
Sbjct: 310 GYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV-EKSWLYFRLMQEYNIV 368
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASER 597
P +H+A + D + RAG LE+A +F+ MPV+P AV G +L CK++ N ++ +
Sbjct: 369 PELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARE 428
Query: 598 LFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLI 646
L +L P YYV L+ +YS F +A S+R+ K+++++K PGC+ I
Sbjct: 429 LIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 191/408 (46%), Gaps = 12/408 (2%)
Query: 133 SNLFVCSSLVDLYFKFSRV-GLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRD 191
SN+ + S LV Y K + + + VF MP R+ +WN +I R+ + SI +F
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 192 MVANG-VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
M V+ D T+ +L A + +E G I L K GF +V + LV +Y G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
+ AR LF + D + Y AM GY GE + +FRE+ SG + S MV L+
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA 370
G L S+ G+C++ + ++ A+T +Y + + +D A +F + V +
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH-QLI 429
W+++I GY +G + LF EM+ PN VT LSACA G L W++ +L+
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH-GGLVEKSWLYFRLM 362
Query: 430 KSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTVTWNTIIFGYGLHGYGHEA 488
+ N+ P + ++ D ++ G + EA + + M K + ++ G ++G
Sbjct: 363 QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVG 422
Query: 489 LKLFKEMLHSGIHPSGVTF---LSILYACSHAGLVREGEEIFHDMVNK 533
++ +E++ + P ++ L+ LY S AG E E + M K
Sbjct: 423 ERVARELIQ--LKPRKASYYVTLAGLY--SAAGRFDEAESLRQWMKEK 466
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 194/424 (45%), Gaps = 56/424 (13%)
Query: 57 ALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AAS 113
++F+ + +IF +N+++ FS + S SI L+ + + + PD++T + +AS
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 114 PDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVI 173
+ K G L+H + GF S+LFV S+LV +Y ++ ARK+FD+MP RD+V + +
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 174 TGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQ--------C 225
G V+ + +FR+M +G +DS +V++L A +L L G + C
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 226 LAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIES 285
L G + +Y KC + A +F + + D+I+++++I GY +G++
Sbjct: 268 LGLNLG--------NAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVM 319
Query: 286 SVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTT 345
S KLF E+L G ++ T +G++ C G + S + L
Sbjct: 320 SFKLFDEMLKEGIEPNAVTFLGVLSA----------------CAHGGLVEKSWLYFRLMQ 363
Query: 346 IYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
Y+ + E+ + D ++ GL E A ++M P+
Sbjct: 364 EYNIVPELKHYASVAD---------------CMSRAGLLEEAEKFLEDM---PVKPDEAV 405
Query: 406 ITTTLSACAQLGSLSFGKWV-HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
+ LS C G++ G+ V +LI+ K + + YV+ A +Y+ G EA L M
Sbjct: 406 MGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLA--GLYSAAGRFDEAESLRQWM 463
Query: 465 SEKN 468
EK
Sbjct: 464 KEKQ 467
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 221/410 (53%), Gaps = 9/410 (2%)
Query: 242 LVSLYSKCGDISTARLLFGMIGK-------PDLIAYNAMISGYTCNGEIESSVKLFRELL 294
L +L S C ++ R + G I + P +N ++ Y + +++++ ++
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
S ++ +I + L + V+ G + + + T+Y + E +
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFE 169
Query: 355 MARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
ARK+FDE+PE+ + +WNA+I G G A+ +F +M + P+ T+ + ++C
Sbjct: 170 NARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCG 229
Query: 415 QLGSLSFGKWVHQLIKSKNLEP--NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTW 472
LG LS +H+ + E +I + +LIDMY KCG + A +F+ M ++N V+W
Sbjct: 230 GLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSW 289
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVN 532
+++I GY +G EAL+ F++M G+ P+ +TF+ +L AC H GLV EG+ F M +
Sbjct: 290 SSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKS 349
Query: 533 KYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIAR 592
++ +EP H+ C+VD+L R GQL++A + + MP++P VWG L+G C+ + ++A
Sbjct: 350 EFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409
Query: 593 VASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPG 642
+ + EL+P + G YV+L+N+Y++ + +R++ K +K+AK P
Sbjct: 410 WVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPA 459
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 164/328 (50%), Gaps = 8/328 (2%)
Query: 156 KVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQ 215
++ D+ P WN ++ +R+ D+IQV+ MV + V D ++ V+ A ++
Sbjct: 74 RILDQYP--IAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH 131
Query: 216 ELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMIS 275
+ +G + +A + GF D + +G ++LY K G+ AR +F + L ++NA+I
Sbjct: 132 DFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIG 191
Query: 276 GYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCV---KSG 332
G G +V++F ++ SG TMV + G L L + CV K+
Sbjct: 192 GLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHK-CVLQAKTE 250
Query: 333 AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQ 392
S+ + +L +Y + +D+A +F+E ++ V +W++MI GY NG T AL F+
Sbjct: 251 EKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFR 310
Query: 393 EMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKC 451
+M PN +T LSAC G + GK ++KS+ LEP + ++D+ ++
Sbjct: 311 QMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRD 370
Query: 452 GNISEARQLFDSMSEK-NTVTWNTIIFG 478
G + EA+++ + M K N + W ++ G
Sbjct: 371 GQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 187/410 (45%), Gaps = 42/410 (10%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYGML 121
P FL+N +++ + + SP +I +Y + +R+ + PD Y+ I A+ D G
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGM-VRSTVLPDRYSLPIVIKAAVQIHDFTLGKE 138
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
LH+ A+ GF + F S + LY K ARKVFDE PER +WN +I GL
Sbjct: 139 LHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI-QC-LAFKFGFHRDAYVL 239
++++++F DM +G++ D T+V+V + L +L + + +C L K D +L
Sbjct: 199 ANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML 258
Query: 240 TGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR 299
L+ +Y KCG + A +F + + +++++++MI GY NG +++ FR++ G R
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 300 VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKL 359
+ T VG++ CV G + A M +
Sbjct: 319 PNKITFVGVLSA----------------CVHGGLVEEGKTYFA------------MMKSE 350
Query: 360 FDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSL 419
F+ P ++ + ++ +++G + A + +EM PN + + C + G +
Sbjct: 351 FELEP--GLSHYGCIVDLLSRDGQLKEAKKVVEEM---PMKPNVMVWGCLMGGCEKFGDV 405
Query: 420 SFGKWVHQLIKSKNLEP-NIYVSTALIDMYAKCGNISEARQLFDSMSEKN 468
+WV + LEP N V L ++YA G + ++ M K
Sbjct: 406 EMAEWVAPYMVE--LEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKK 453
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 169/295 (57%), Gaps = 4/295 (1%)
Query: 349 RLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITT 408
+ EI AR+LFD P + + +WN++ISGY Q A+ LF EM+ P+ V I +
Sbjct: 195 KAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVS 254
Query: 409 TLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKN 468
TLSACAQ G GK +H K K L + +++T L+D YAKCG I A ++F+ S+K
Sbjct: 255 TLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKT 314
Query: 469 TVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
TWN +I G +HG G + F++M+ SGI P GVTF+S+L CSH+GLV E +F
Sbjct: 315 LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD 374
Query: 529 DMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA----VWGTLLGACKI 584
M + Y + +H+ CM D+LGRAG +E+A E I MP + G W LLG C+I
Sbjct: 375 QMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRI 434
Query: 585 HKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAK 639
H N +IA A+ R+ L P G Y ++ +Y+ + + +RE+ + K K
Sbjct: 435 HGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVK 489
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 190/436 (43%), Gaps = 81/436 (18%)
Query: 9 TFINKACN-LPHLAQIHAQLILNGYQS-DLASITKLTQKLFDFGA-----------TRHA 55
+++ K C L HL Q HAQ I +G S D + LF + +A
Sbjct: 8 SYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYA 67
Query: 56 RALFFSVRNPDIFLFNVLVKGFSVNASPS-SSIALYTHLRLRTNLAPDNYTYAFTIAASP 114
++F + NP F FN +++ +++ S SS + +R R ++ PD +T+ F A
Sbjct: 68 TSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMR-RRSVPPDFHTFPFVFKACA 126
Query: 115 DDKYGML-----LHAHAIVDGFGSNLFVCSSLVDLY------------------------ 145
K G L LH A+ G S+LF ++L+ +Y
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 146 -------FKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
K + AR++FD MP RD V+WN++I+G + + ++I++F +MVA G++
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
D+ +V+ L A A+ + G I + D+++ TGLV Y+KCG I TA +
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 259 FGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHL 318
F + L +NAMI+G +G E +V FR+++ SG + T +
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFI------------ 354
Query: 319 HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGY 378
S+ C SG + + N D R L+D + E + + M
Sbjct: 355 ----SVLVGCSHSGLVDEAR------------NLFDQMRSLYDVNRE--MKHYGCMADLL 396
Query: 379 TQNGLTETALSLFQEM 394
+ GL E A + ++M
Sbjct: 397 GRAGLIEEAAEMIEQM 412
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 162/379 (42%), Gaps = 52/379 (13%)
Query: 151 VGLARKVFDEMPERDTVAWNTVITGLVRNCYYDD-----SIQVFRDMVANGVQVDSTTVV 205
V A VF + T +NT+I R C + S + F +M V D T
Sbjct: 64 VSYATSVFRFITNPSTFCFNTII----RICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFP 119
Query: 206 TVLPAVAELQ--ELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYS---------------- 247
V A A + +L + + C A +FG D + L L+ +YS
Sbjct: 120 FVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENP 179
Query: 248 ---------------KCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
K +I AR LF + DL+++N++ISGY ++KLF E
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
++ G + + +V + + G +I Y + +S ++T L Y++
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 353 IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
ID A ++F+ +KT+ WNAMI+G +G E + F++M+++ P+ VT + L
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Query: 413 CAQLGSLSFGKWVHQLIKS---KNLEPNIYVSTALIDMYAKCGNISEARQLFDSM----- 464
C+ G + + + ++S N E Y A D+ + G I EA ++ + M
Sbjct: 360 CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMA--DLLGRAGLIEEAAEMIEQMPKDGG 417
Query: 465 SEKNTVTWNTIIFGYGLHG 483
+ + + W+ ++ G +HG
Sbjct: 418 NREKLLAWSGLLGGCRIHG 436
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKL 491
+N + ++ LID K I AR+LFDSM ++ V+WN++I GY + EA+KL
Sbjct: 177 ENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKL 236
Query: 492 FKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILG 551
F EM+ G+ P V +S L AC+ +G ++G+ I HD + R+ + +VD
Sbjct: 237 FDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAI-HDYTKRKRLFIDSFLATGLVDFYA 295
Query: 552 RAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDI 590
+ G ++ A+E I + + W ++ +H N ++
Sbjct: 296 KCGFIDTAME-IFELCSDKTLFTWNAMITGLAMHGNGEL 333
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 231/490 (47%), Gaps = 31/490 (6%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
LH A G + V +SL+ Y K +A ++F + D V+WN +I ++
Sbjct: 237 LHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSEN 296
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
++++F M +G + T V+VL + +Q L G I + K G +
Sbjct: 297 PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNA 356
Query: 242 LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
L+ Y+KCG++ +RL F I +++ +NA++SGY N + + LF ++L G R +
Sbjct: 357 LIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPT 415
Query: 302 SSTMVGLIP--VSSPFGHLHLTCSIQGYCVKSGAIS--------NSSVSTAL-------- 343
T + + LH GY +S N ++ AL
Sbjct: 416 EYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASG 475
Query: 344 ----------TTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQE 393
IYSR + + KL + +WN I+ +++ E + LF+
Sbjct: 476 PTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKH 535
Query: 394 MMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLE-PNIYVSTALIDMYAKCG 452
M+ + P+ T + LS C++L L+ G +H LI + + +V LIDMY KCG
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 453 NISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILY 512
+I ++F+ EKN +TW +I G+HGYG EAL+ FKE L G P V+F+SIL
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
Query: 513 ACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGP 572
AC H G+V+EG +F M Y +EP +H+ C VD+L R G L++A IR MP
Sbjct: 656 ACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADA 714
Query: 573 AVWGTLLGAC 582
VW T L C
Sbjct: 715 PVWRTFLDGC 724
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 227/476 (47%), Gaps = 32/476 (6%)
Query: 135 LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
++VC++++ LY K V LA KVFD+MPER+ V++NT+I G + D + VF +M
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 195 NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFG-FHRDAYVLTGLVSLYSKCGDIS 253
G + +TV +L + ++ G + L+ K+G F DA+V T L+ LY + +
Sbjct: 109 FGYLPNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166
Query: 254 TARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS 313
A +F + L +N M+S G ++ + FREL+ G ++ S+ +G++ S
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 314 PFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNA 373
L ++ + K G SV +L + Y + MA ++F ++ + +WNA
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 374 MISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN 433
+I ++ AL LF M F+PN T + L + + LS G+ +H ++
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 434 LEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFK 493
E I + ALID YAKCGN+ ++R FD + +KN V WN ++ GY + G L LF
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFL 405
Query: 494 EMLHSGIHPSGVTFLSILYACS-------HAGLVREGEE----IFHDMVNKYRIEPLAEH 542
+ML G P+ TF + L +C H+ +VR G E + ++ Y L
Sbjct: 406 QMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMND 465
Query: 543 HACMVD----------------ILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGAC 582
++D I R GQ ++++ I T+ +P W + AC
Sbjct: 466 ALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/583 (25%), Positives = 259/583 (44%), Gaps = 46/583 (7%)
Query: 38 SITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRT 97
+I L +KL G A +F + + FN ++KG+S + +++ +R
Sbjct: 54 NIISLYEKL---GEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFG 110
Query: 98 NLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDG-FGSNLFVCSSLVDLYFKFSRVGLARK 156
L + AS D + G LH ++ G F ++ FV + L+ LY + + +A +
Sbjct: 111 YLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 157 VFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQE 216
VF++MP + WN +++ L + + + FR++V G + ++ + VL V+ +++
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKD 230
Query: 217 LGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISG 276
L + + C A K G + V+ L+S Y KCG+ A +F G D++++NA+I
Sbjct: 231 LDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICA 290
Query: 277 YTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISN 336
+ ++KLF + G + T V ++ VSS L I G +K+G +
Sbjct: 291 TAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETG 350
Query: 337 SSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMT 396
+ AL Y++ ++ +R FD +K + WNA++SGY N LSLF +M+
Sbjct: 351 IVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQ 409
Query: 397 TEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKC----- 451
F P T +T L +C ++ + +H +I E N YV ++L+ YAK
Sbjct: 410 MGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMND 465
Query: 452 ---------------------------GNISEARQLFDSMSEKNTVTWNTIIFGYGLHGY 484
G E+ +L ++ + +TV+WN I Y
Sbjct: 466 ALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDY 525
Query: 485 GHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHA 544
E ++LFK ML S I P TF+SIL CS + G I H ++ K A+
Sbjct: 526 HEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI-HGLITKTDFS-CADTFV 583
Query: 545 C--MVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH 585
C ++D+ G+ G + ++ E W L+ IH
Sbjct: 584 CNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIH 625
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 111/247 (44%), Gaps = 37/247 (14%)
Query: 13 KACNLPHLAQIHAQLILNGYQSD---LASITKLTQK---------LFDF----------- 49
K+C + L Q+H+ ++ GY+ + L+S+ + K L D+
Sbjct: 424 KSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLN 483
Query: 50 ---------GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLA 100
G + L ++ PD +N+ + S + I L+ H+ L++N+
Sbjct: 484 IVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHM-LQSNIR 542
Query: 101 PDNYTYAFTIAASP---DDKYGMLLHAHAIVDGFG-SNLFVCSSLVDLYFKFSRVGLARK 156
PD YT+ ++ D G +H F ++ FVC+ L+D+Y K + K
Sbjct: 543 PDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMK 602
Query: 157 VFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQE 216
VF+E E++ + W +I+ L + Y ++++ F++ ++ G + D + +++L A
Sbjct: 603 VFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGM 662
Query: 217 LGVGMGI 223
+ GMG+
Sbjct: 663 VKEGMGL 669
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/425 (32%), Positives = 222/425 (52%), Gaps = 10/425 (2%)
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCN---GEIESSV 287
G Y L+ L+ L S +S A + I P + YN +IS N + +
Sbjct: 36 GLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAF 94
Query: 288 KLFRELLVSGQ---RVSSSTMVGLIPVSSPFGHLHLTC-SIQGYCVKSGAISNSS--VST 341
L+ ++L S R + T L S H ++ + +K N V
Sbjct: 95 SLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQA 154
Query: 342 ALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTP 401
AL Y+ ++ AR LF+ E +A WN +++ Y + ++ + M + P
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRP 214
Query: 402 NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
N +++ + +CA LG G W H + NL N +V T+LID+Y+KCG +S AR++F
Sbjct: 215 NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 462 DSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
D MS+++ +N +I G +HG+G E ++L+K ++ G+ P TF+ + ACSH+GLV
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
EG +IF+ M Y IEP EH+ C+VD+LGR+G+LE+A E I+ MPV+P +W + LG+
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 582 CKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTP 641
+ H + + +A + L L+ + G YVLLSNIY+ + RE+ K ++ K+P
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 642 GCTLI 646
G + +
Sbjct: 455 GISTL 459
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 177/404 (43%), Gaps = 13/404 (3%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
+HA I G + + S L+ L + A + ++P +NT+I+ +V N
Sbjct: 28 IHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSVFLYNTLISSIVSNHN 86
Query: 182 YDDSIQVFR--DMV----ANGVQVDSTTVVTVLPAV---AELQELGVGMGIQCLAFKFGF 232
+ F D + +N V+ + T ++ A A+ G + L F
Sbjct: 87 STQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPV 146
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
+ D +V LV Y+ CG + AR LF I +PDL +N +++ Y + EI+S ++
Sbjct: 147 NHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLL 206
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
+ R + ++V LI + G Y +K+ N V T+L +YS+
Sbjct: 207 FMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGC 266
Query: 353 IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
+ ARK+FDE ++ V+ +NAMI G +G + + L++ +++ P+ T T+SA
Sbjct: 267 LSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISA 326
Query: 413 CAQLGSLSFGKWVHQLIKS-KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-NTV 470
C+ G + G + +K+ +EP + L+D+ + G + EA + M K N
Sbjct: 327 CSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT 386
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSG-VTFLSILYA 513
W + + HG K +L SG LS +YA
Sbjct: 387 LWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYA 430
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 12/320 (3%)
Query: 8 ITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDI 67
+ I+K +L +L QIHAQ+I G ++KL L +A ++ + NP +
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLH-LSSTVCLSYALSILRQIPNPSV 71
Query: 68 FLFNVLVKGFSVNASPSSS---IALYTH-LRLRTNLA-PDNYTYAFTIAASPDD----KY 118
FL+N L+ N + + + +LY L R+N P+ +TY AS D ++
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 119 GMLLHAHAI--VDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGL 176
G LHAH + ++ + FV ++LV Y ++ AR +F+ + E D WNT++
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+ D +V + V+ + ++V ++ + A L E G+ K +
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ 251
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
+V T L+ LYSKCG +S AR +F + + D+ YNAMI G +G + ++L++ L+
Sbjct: 252 FVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQ 311
Query: 297 GQRVSSSTMVGLIPVSSPFG 316
G S+T V I S G
Sbjct: 312 GLVPDSATFVVTISACSHSG 331
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT 109
G R AR+LF +R PD+ +N L+ ++ N+ S L +R + P+ +
Sbjct: 164 GKLREARSLFERIREPDLATWNTLLAAYA-NSEEIDSDEEVLLLFMRMQVRPNELSLVAL 222
Query: 110 IAASPDDK---YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT 166
I + + G+ H + + + N FV +SL+DLY K + ARKVFDEM +RD
Sbjct: 223 IKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282
Query: 167 VAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI-QC 225
+N +I GL + + + I++++ +++ G+ DS T V + A + + G+ I
Sbjct: 283 SCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNS 342
Query: 226 LAFKFGFHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIGKPDLIAYNAMISGYTCNGEIE 284
+ +G LV L + G + A + M KP+ + + + +G+ E
Sbjct: 343 MKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFE 402
Query: 285 SSVKLFRELL 294
+ LL
Sbjct: 403 RGEIALKHLL 412
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 215/433 (49%), Gaps = 46/433 (10%)
Query: 228 FKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPD----LIAYNAMISGYTCNGEI 283
+FGF D+Y L+S K + + ++ G K L N+++ YTC G +
Sbjct: 110 LRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGAL 169
Query: 284 ESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTAL 343
+ + KLF E IP K +S +S+ +
Sbjct: 170 DLAKKLFVE----------------IP-------------------KRDIVSWNSIIAGM 194
Query: 344 TTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNP 403
R ++ A KLFDE P+K + +WN MIS Y ++SLF+EM+ F N
Sbjct: 195 V----RNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNE 250
Query: 404 VTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDS 463
T+ L+AC + L G+ VH + L ++ + TALIDMY KC + AR++FDS
Sbjct: 251 STLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDS 310
Query: 464 MSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREG 523
+S +N VTWN +I + LHG L+LF+ M++ + P VTF+ +L C+ AGLV +G
Sbjct: 311 LSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQG 370
Query: 524 EEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLLG 580
+ + MV++++I+P H CM ++ AG E+A E ++ +P V P W LL
Sbjct: 371 QSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLS 430
Query: 581 ACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKT 640
+ + N + ++ L E DP + YY LL NIYSV + +RE+ K+RK+ +
Sbjct: 431 SSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRI 490
Query: 641 PGCTLIEINGTTH 653
PGC L+++ H
Sbjct: 491 PGCGLVDLKEIVH 503
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 147/322 (45%), Gaps = 32/322 (9%)
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVS 244
++ + D++ G DS T V+++ + + + G A K G + V L+
Sbjct: 102 ALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMH 161
Query: 245 LYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIES------------------- 285
+Y+ CG + A+ LF I K D++++N++I+G NG++ +
Sbjct: 162 MYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIM 221
Query: 286 ------------SVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
S+ LFRE++ +G + + ST+V L+ L S+ +++
Sbjct: 222 ISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFL 281
Query: 334 ISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQE 393
S+ + TAL +Y + E+ +AR++FD + WN MI + +G E L LF+
Sbjct: 282 NSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEA 341
Query: 394 MMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKCG 452
M+ P+ VT L CA+ G +S G+ + L+ + ++PN + ++Y+ G
Sbjct: 342 MINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAG 401
Query: 453 NISEARQLFDSMSEKNTVTWNT 474
EA + ++ +++ +T
Sbjct: 402 FPEEAEEALKNLPDEDVTPEST 423
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 117/288 (40%), Gaps = 35/288 (12%)
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
+ SG +SS + L SR + ++ S K A N + Y + + AL
Sbjct: 46 ITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIY-RSIGKLYCA-NPVFKAYLVSSSPKQAL 103
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMY 448
+ +++ F P+ T + +S + + GK H + + V +L+ MY
Sbjct: 104 GFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMY 163
Query: 449 AKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHG---YGHE------------------ 487
CG + A++LF + +++ V+WN+II G +G H+
Sbjct: 164 TCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMIS 223
Query: 488 ----------ALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
++ LF+EM+ +G + T + +L AC + ++EG + ++ +
Sbjct: 224 AYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNS 283
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH 585
+ A ++D+ G+ ++ A ++ + W ++ A +H
Sbjct: 284 SVVIDTA-LIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILAHCLH 329
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 216/413 (52%), Gaps = 36/413 (8%)
Query: 270 YNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCV 329
YN +I Y GE ++S+ LF +L S + ++ T LI + + ++ G +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 330 KSGAISNSSVSTALTTIYSRLNEIDMARKLFDE--------------------------- 362
K G + + V T+ Y + +++ +RK+FD+
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 363 ----SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE---FTPNPVTITTTLSACAQ 415
P V +W +I+G+++ GL AL +F EM+ E TPN T + LS+CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 416 L--GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWN 473
G + GK +H + SK + + TAL+DMY K G++ A +FD + +K WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
II +G +AL++F+ M S +HP+G+T L+IL AC+ + LV G ++F + ++
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARV 593
Y+I P +EH+ C+VD++GRAG L A FI+++P EP +V G LLGACKIH+NT++
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 594 ASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLI 646
++L L P G YV LS ++ N+ +A +R+ + + K P +++
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 156/333 (46%), Gaps = 37/333 (11%)
Query: 169 WNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAF 228
+NT+I + Y S+ +F M+A+ VQ ++ T +++ A + G+ + A
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 229 KFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVK 288
K GF D +V T V Y + GD+ ++R +F I P ++A N+++ NGE++ + +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 289 LF-------------------------RELLVSGQRVSS---------STMVGLIPVSSP 314
F + L+V G+ + + +T V ++ +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 315 F--GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWN 372
F G + L I GY + I +++ TAL +Y + +++MA +FD+ +K V AWN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 373 AMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK 432
A+IS NG + AL +F+ M ++ PN +T+ L+ACA+ + G + I S+
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 433 -NLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
+ P ++D+ + G + +A S+
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL 386
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 40/262 (15%)
Query: 69 LFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLLHAH 125
++N L++ + +S+AL+TH+ L +++ P+N T+ I A+ YG+ LH
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHM-LASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQ 111
Query: 126 AIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDE------------------------- 160
A+ GF + FV +S V Y + + +RK+FD+
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 161 ------MPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQV---DSTTVVTVLPAV 211
MP D V+W TVI G + + ++ VF +M+ N V + T V+VL +
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 212 AELQELGVGMGIQCLAFKFGFH--RDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIA 269
A + G+ +G Q + + T L+ +Y K GD+ A +F I + A
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 270 YNAMISGYTCNGEIESSVKLFR 291
+NA+IS NG + ++++F
Sbjct: 292 WNAIISALASNGRPKQALEMFE 313
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 37/231 (16%)
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
KT +N +I Y G +T+L+LF M+ + PN +T + + A S+S+G +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDS---------------------- 463
H + + +V T+ + Y + G++ +R++FD
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 464 ---------MSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG---IHPSGVTFLSIL 511
M + V+W T+I G+ G +AL +F EM+ + I P+ TF+S+L
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 512 YACSH--AGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL 560
+C++ G +R G++I H V I ++D+ G+AG LE AL
Sbjct: 229 SSCANFDQGGIRLGKQI-HGYVMSKEIILTTTLGTALLDMYGKAGDLEMAL 278
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 229 bits (583), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 199/399 (49%), Gaps = 11/399 (2%)
Query: 377 GYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
+ ++G + AL + + + + + C + L K VH I +
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML 496
++ + L++MY+ CG +EA +F+ MSEKN TW II + +G+G +A+ +F
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 497 HSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQL 556
G P G F I YAC G V EG F M Y I P E + +V++ G L
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 557 EKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIY 616
++ALEF+ MP+EP VW TL+ ++H N ++ +E + LDP + N
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRL-------NKQ 460
Query: 617 SVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLT 676
S P AS E K L K G L + + F +GD + ++ +L L
Sbjct: 461 SREGFIPVKASDVE---KESLKKRSG-ILHGVKSSMQEFRAGDTNLPENDELFQLLRNLK 516
Query: 677 GKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCL 736
M E+GY ET +LHD+++E KE ++ HSE++A A A++ + P +IKNLRVC+
Sbjct: 517 MHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCV 576
Query: 737 DCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
DCH A K +S I R ++ RD RFH K+G C+C DYW
Sbjct: 577 DCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 331 SGAISNSSVST--ALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
S ++S+ +S+ L +YS + A +F++ EK + W +I + +NG E A+
Sbjct: 281 SASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAI 340
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKW-VHQLIKSKNLEPNIYVSTALIDM 447
+F P+ AC LG + G + + + P+I +L++M
Sbjct: 341 DMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEM 400
Query: 448 YAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHG 483
YA G + EA + + M E N W T++ +HG
Sbjct: 401 YALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 226 bits (576), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 207/417 (49%), Gaps = 44/417 (10%)
Query: 267 LIAYNAMISGYTCNGEIESSVKLFREL-----LVSGQRVSSSTMVGLIPVSSPFGHLHLT 321
LI+ +S Y G E ++ LF ++ L V S + P L
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPV----LG 67
Query: 322 CSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQN 381
S+ + VKS +SN V AL +Y + + ARKLFDE P++ WNAMIS YT
Sbjct: 68 GSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHC 127
Query: 382 GLTETALSLFQ---------------------------------EMMTTEFTPNPVTITT 408
G + A+ L++ +M+ F PN +T+
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 409 TLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKN 468
+SAC+ +G+ K +H +EP+ + + L++ Y +CG+I + +FDSM +++
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 469 TVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
V W+++I Y LHG ALK F+EM + + P + FL++L ACSHAGL E F
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 529 DMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNT 588
M Y + +H++C+VD+L R G+ E+A + I+ MP +P WG LLGAC+ +
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 589 DIARVASERLFELDPGSVGYYVLLSNIY-SVGRNFPKAASIREVAKKRKLAKTPGCT 644
++A +A+ L ++P + YVLL IY SVGR +A +R K+ + +PG +
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQ-EEAERLRLKMKESGVKVSPGSS 423
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 145/334 (43%), Gaps = 42/334 (12%)
Query: 182 YDDSIQVFRDMVAN-GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLT 240
++ ++ +F M ++ + +D+ L + A +G + + K F + +V
Sbjct: 28 HEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGC 87
Query: 241 GLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRV 300
L+ +Y KC +S AR LF I + + + +NAMIS YT G+++ +V+L+ + V
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 301 SSS---------------------------------TMVGLIPVSSPFGHLHLTCSIQGY 327
S + T++ L+ S G L I Y
Sbjct: 148 SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSY 207
Query: 328 CVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETA 387
++ + + + L Y R I + +FD ++ V AW+++IS Y +G E+A
Sbjct: 208 AFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESA 267
Query: 388 LSLFQEMMTTEFTPNPVTITTTLSACAQLG----SLSFGKWVHQLIKSKNLEPNIYVSTA 443
L FQEM + TP+ + L AC+ G +L + K ++ L + +
Sbjct: 268 LKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK---RMQGDYGLRASKDHYSC 324
Query: 444 LIDMYAKCGNISEARQLFDSMSEKNTV-TWNTII 476
L+D+ ++ G EA ++ +M EK T TW ++
Sbjct: 325 LVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL 358
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 56/332 (16%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVIT---- 174
G +HAH++ F SN FV +L+D+Y K V ARK+FDE+P+R+ V WN +I+
Sbjct: 67 GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 175 -GLVRNC--YYD--------------------------DSIQVFRDMVANGVQVDSTTVV 205
G V+ Y+ +I+ +R M+ + + T++
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 206 TVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKP 265
++ A + + + I AF+ + +GLV Y +CG I +L+F +
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 266 DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQ 325
D++A++++IS Y +G+ ES++K F+E+ + + P F ++ CS
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEM----------ELAKVTPDDIAFLNVLKACSHA 296
Query: 326 GYCVKS-----------GAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK-TVAAWNA 373
G ++ G ++ + L + SR+ + A K+ PEK T W A
Sbjct: 297 GLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGA 356
Query: 374 MISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
++ G E A +E++ E NP
Sbjct: 357 LLGACRNYGEIELAEIAARELLMVE-PENPAN 387
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/584 (25%), Positives = 273/584 (46%), Gaps = 37/584 (6%)
Query: 50 GATRHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT 109
G AR LF + D +N ++ + N ++ + R + ++A
Sbjct: 110 GCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMN-RDGVRATETSFAGV 168
Query: 110 IAASP---DDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT 166
+ + D + LH + G+ N+ + +S+VD+Y K + AR+VFDE+
Sbjct: 169 LKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSD 228
Query: 167 VAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCL 226
V+WN ++ + + D+++ +F M+ V+ + TV +V+ A + L VG I +
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI 288
Query: 227 AFKFGFHRDAYVLTGLVSLYSKCGDISTARL----------------------------- 257
A K D V T + +Y KC + +AR
Sbjct: 289 AVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREA 348
Query: 258 --LFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
LF ++ + +++++NAM+ GY E + ++ + + + + T+V ++ V S
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPE-KTVAAWNAM 374
+ + G+ + G +N V+ AL +Y + + A F + E + +WNA+
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 375 ISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNL 434
++G + G +E ALS F E M E P+ T+ T L+ CA + +L+ GK +H +
Sbjct: 469 LTGVARVGRSEQALSFF-EGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGY 527
Query: 435 EPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKE 494
+ ++ + A++DMY+KC A ++F + ++ + WN+II G +G E +LF
Sbjct: 528 KIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFML 587
Query: 495 MLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG 554
+ + G+ P VTFL IL AC G V G + F M KY I P EH+ CM+++ + G
Sbjct: 588 LENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYG 647
Query: 555 QLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERL 598
L + EF+ MP +P + + AC+ ++ + + A++RL
Sbjct: 648 CLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 235/490 (47%), Gaps = 38/490 (7%)
Query: 135 LFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
+F+ + ++ Y K V AR++F+EMPERD +WN VIT +N D+ ++FR M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 195 NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
+GV+ T+ VL + + +L + + C K+G+ + + T +V +Y KC +S
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 255 ARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
AR +F I P +++N ++ Y G + +V +F ++L R + T+ ++ S
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAM 374
L + I VK ++++ VST++ +Y + + ++ AR++FD++ K + +W +
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 375 ISGYTQNGLTETALSLFQEM------------------------------MTTEFTP-NP 403
+SGY +GLT A LF M M E +
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 404 VTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDS 463
VT+ L+ C+ + + GK H I + N+ V+ AL+DMY KCG + A F
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQ 455
Query: 464 MSE-KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVRE 522
MSE ++ V+WN ++ G G +AL F E + PS T ++L C++ +
Sbjct: 456 MSELRDEVSWNALLTGVARVGRSEQALSFF-EGMQVEAKPSKYTLATLLAGCANIPALNL 514
Query: 523 GEEIFHDMV-NKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL-G 580
G+ I ++ + Y+I+ + MVD+ + + A+E + +W +++ G
Sbjct: 515 GKAIHGFLIRDGYKIDVVI--RGAMVDMYSKCRCFDYAIEVFKEAATRD-LILWNSIIRG 571
Query: 581 ACKIHKNTDI 590
C+ ++ ++
Sbjct: 572 CCRNGRSKEV 581
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 219/489 (44%), Gaps = 42/489 (8%)
Query: 13 KAC----NLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIF 68
K+C +L L Q+H ++ GY ++ T + AR +F + NP
Sbjct: 170 KSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDV 229
Query: 69 LFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---KYGMLLHAH 125
+NV+V+ + ++ ++ + L N+ P N+T + + A + G ++HA
Sbjct: 230 SWNVIVRRYLEMGFNDEAVVMFFKM-LELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI 288
Query: 126 AIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDE------------------------- 160
A+ ++ V +S+ D+Y K R+ AR+VFD+
Sbjct: 289 AVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREA 348
Query: 161 ------MPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAEL 214
MPER+ V+WN ++ G V +D+++ M +D+ T+V +L + +
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 215 QELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK-PDLIAYNAM 273
++ +G ++ G+ + V L+ +Y KCG + +A + F + + D +++NA+
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
++G G E ++ F + V + S T+ L+ + L+L +I G+ ++ G
Sbjct: 469 LTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGY 527
Query: 334 ISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQE 393
+ + A+ +YS+ D A ++F E+ + + WN++I G +NG ++ LF
Sbjct: 528 KIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFML 587
Query: 394 MMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCG 452
+ P+ VT L AC + G + G ++ + ++ P + +I++Y K G
Sbjct: 588 LENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYG 647
Query: 453 NISEARQLF 461
+ + +
Sbjct: 648 CLHQLEEFL 656
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 171/389 (43%), Gaps = 40/389 (10%)
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
++L + Y KCG + AR LF + + D ++NA+I+ NG + ++FR +
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
G R + ++ G++ L L + VK G N + T++ +Y + + A
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDA 216
Query: 357 RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
R++FDE + +WN ++ Y + G + A+ +F +M+ P T+++ + AC++
Sbjct: 217 RRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRS 276
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKC------------------------- 451
+L GK +H + ++ + VST++ DMY KC
Sbjct: 277 LALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAM 336
Query: 452 ------GNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGV 505
G EAR+LFD M E+N V+WN ++ GY EAL M + V
Sbjct: 337 SGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNV 396
Query: 506 TFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRT 565
T + IL CS V+ G++ H + ++ + ++D+ G+ G L+ A + R
Sbjct: 397 TLVWILNVCSGISDVQMGKQA-HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQ 455
Query: 566 MPVEPGPAVWGTLLGACKIHKNTDIARVA 594
M W LL T +ARV
Sbjct: 456 MSELRDEVSWNALL--------TGVARVG 476
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 436 PNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEM 495
P I++ I+ Y KCG + +AR+LF+ M E++ +WN +I +G E ++F+ M
Sbjct: 94 PPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM 153
Query: 496 LHSGIHPSGVTFLSILYACSHAGLVREGEEI--FHDMVNKYRIEPLAEHHACMVDILGRA 553
G+ + +F +L +C GL+ + + H V KY + +VD+ G+
Sbjct: 154 NRDGVRATETSFAGVLKSC---GLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKC 210
Query: 554 GQLEKALEFIRTMPVEPGPAVWGTLL 579
+ A + V P W ++
Sbjct: 211 RVMSDARRVFDEI-VNPSDVSWNVIV 235
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 224 bits (570), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 194/383 (50%), Gaps = 29/383 (7%)
Query: 393 EMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCG 452
E++ P+ +CA L SL K VH + ++ +I M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 453 NISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILY 512
+I++A+++FD M +K+ +W+ ++ Y +G G +AL LF+EM G+ P+ TFL++
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 513 ACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGP 572
AC+ G + E F M N++ I P EH+ ++ +LG+ G L +A ++IR +P EP
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 573 AVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVA 632
W + ++H + D+ E + ++DP +++ I + P S +E
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSK----AVINKIPT-----PPPKSFKETN 456
Query: 633 KKRKLAKTPGCTLIEINGTTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSL 692
T ++E T Y K + + Y +T L
Sbjct: 457 -----MVTSKSRILEFRNLT---------------FYKDEAKEMAAKKGVVYVPDTRFVL 496
Query: 693 HDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERV 752
HD+++E KE + HSE+LAIA+ +I T P + IIKNLRVC DCH K +SKI RV
Sbjct: 497 HDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRV 556
Query: 753 IVVRDANRFHHFKDGICSCGDYW 775
++VRD RFHHFKDG CSCGDYW
Sbjct: 557 LIVRDNKRFHHFKDGKCSCGDYW 579
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 2/194 (1%)
Query: 292 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLN 351
ELL G V L + L + + + ++S + ++ + +++ +
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 352 EIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
I A+++FD +K + +W+ M+ Y+ NG+ + AL LF+EM PN T T
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 412 ACAQLGSLSFGKWVHQLIKSKN-LEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
ACA +G + +K+++ + P ++ + KCG++ EA Q + + T
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 471 TWNTIIFGYG-LHG 483
+ + Y LHG
Sbjct: 406 DFWEAMRNYARLHG 419
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 254/502 (50%), Gaps = 18/502 (3%)
Query: 154 ARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAE 213
A +FDE+P+RD + N+ ++ +R+ +D++ +F + + S T VL A +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 214 LQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAM 273
L G + L K G T L+ +YSK G + + +F + + DL+++NA+
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
+SG+ NG+ + ++ +F + +S T+ ++ + L + V +G
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 334 ISNSSVSTALTTIYSRLNEIDMARKLFDESPEKT-VAAWNAMISGYTQNGLTETALSLFQ 392
+ TA+ + YS + I+ A K+++ T N++ISG +N + A
Sbjct: 217 -DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF---- 271
Query: 393 EMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCG 452
++ + PN ++++L+ C+ L GK +H + + + L+DMY KCG
Sbjct: 272 -LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCG 330
Query: 453 NISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH--SGIHPSGVTFLSI 510
I +AR +F ++ K+ V+W ++I Y ++G G +AL++F+EM SG+ P+ VTFL +
Sbjct: 331 QIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVV 390
Query: 511 LYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEP 570
+ AC+HAGLV+EG+E F M KYR+ P EH+ C +DIL +AG+ E+ + M
Sbjct: 391 ISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEND 450
Query: 571 GP----AVWGTLLGACKIHKNTDIAR---VASERLFELDPGSVGYYVLLSNIYSVGRNFP 623
A+W +L AC + N D+ R VA + E P + YVL+SN Y+ +
Sbjct: 451 NQSIPCAIWVAVLSACSL--NMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWD 508
Query: 624 KAASIREVAKKRKLAKTPGCTL 645
+R K + L KT G +L
Sbjct: 509 VVEELRGKLKNKGLVKTAGHSL 530
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 201/428 (46%), Gaps = 24/428 (5%)
Query: 54 HARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT---- 109
HA LF + D+ N + + +P+ ++AL+ + +PD ++ FT
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIH---RASPDLSSHTFTPVLG 92
Query: 110 ---IAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDT 166
+ + P+ G +HA I G + ++L+D+Y K+ + + +VF+ + E+D
Sbjct: 93 ACSLLSYPET--GRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDL 150
Query: 167 VAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCL 226
V+WN +++G +RN +++ VF M V++ T+ +V+ A L+ L G + +
Sbjct: 151 VSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAM 210
Query: 227 AFKFGFHRDAYVL-TGLVSLYSKCGDISTARLLFGMIG-KPDLIAYNAMISGYTCNGEIE 284
G RD VL T ++S YS G I+ A ++ + D + N++ISG N +
Sbjct: 211 VVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYK 268
Query: 285 SSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALT 344
+ LL+S QR + + + S L + I +++G +S+S + L
Sbjct: 269 EAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLM 323
Query: 345 TIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMT--TEFTPN 402
+Y + +I AR +F P K+V +W +MI Y NG AL +F+EM + PN
Sbjct: 324 DMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPN 383
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSK-NLEPNIYVSTALIDMYAKCGNISEARQLF 461
VT +SACA G + GK ++K K L P ID+ +K G E +L
Sbjct: 384 SVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLV 443
Query: 462 DSMSEKNT 469
+ M E +
Sbjct: 444 ERMMENDN 451
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 320 LTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYT 379
C G ++ G ++ S + L ++ R N A LFDE P++ +++ N+ +S +
Sbjct: 2 FACLRIGRFIRLGNVTVKSTNLVLRCVFIR-NFATHADHLFDELPQRDLSSLNSQLSSHL 60
Query: 380 QNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIY 439
++G L+LF ++ + T T L AC+ L G+ VH L+ + E
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 440 VSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
TALIDMY+K G++ ++ ++F+S+ EK+ V+WN ++ G+ +G G EAL +F M
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 500 IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
+ S T S++ C+ ++++G+++ +V R L M+ G + +A
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR--DLVVLGTAMISFYSSVGLINEA 238
Query: 560 LEFIRTMPVEPGPAVWGTLLGACKIHKN 587
++ ++ V + +L+ C ++N
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRN 266
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 250/515 (48%), Gaps = 12/515 (2%)
Query: 146 FKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVV 205
FK + A +FDEMPERD V+WNT+I+GLV +++ I+VF DM ++ T
Sbjct: 81 FKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS 140
Query: 206 TVLPAVAELQELGVGMGIQCLAFKFGFHR-DAYVLTGLVSLYSKCGDISTARLLFGMIGK 264
+ V ++ G I A G R + V ++ +Y + G A +F +
Sbjct: 141 ILASLVTCVRH---GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMED 197
Query: 265 PDLIAYNAMISGYTCNGEIESSVKLF---RELLVSGQRVSSSTMVGLIPVSSPFGHLHLT 321
D++++N +I + +G E ++ F RE+ + + S +V + S L
Sbjct: 198 RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVS---ICSDLRELSKG 254
Query: 322 CSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQN 381
C+K G +SNS V A ++S+ N +D + KLF E + N+MI Y+ +
Sbjct: 255 KQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
Query: 382 GLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVS 441
E AL LF MT P+ T ++ LS+ + L G VH L+ + + V+
Sbjct: 315 CCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVA 373
Query: 442 TALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEML-HSGI 500
T+L++MY K G++ A +F K+ + WNT+I G + E+L +F ++L + +
Sbjct: 374 TSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSL 433
Query: 501 HPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL 560
P VT + IL AC +AG V EG +IF M + + P EH+AC++++L R G + +A
Sbjct: 434 KPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAK 493
Query: 561 EFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGSVGYYVLLSNIYSVGR 620
+ +P EP +W +L A +T +A ++ + E +P S Y++L IY +
Sbjct: 494 DIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTW 553
Query: 621 NFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVF 655
+ + +R + KL G + I I + F
Sbjct: 554 RWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 147/333 (44%), Gaps = 33/333 (9%)
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
GF R Y + LY K G + A LF I + I +N + G NG + +++ LF
Sbjct: 34 GFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLF 93
Query: 291 RELLVSGQRVSSSTMV-GLI---------------------PVSSPFGHLH--LTCSIQG 326
E+ VS +TM+ GL+ P F L +TC G
Sbjct: 94 DEM-PERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHG 152
Query: 327 YCVKSGAIS------NSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQ 380
+ AI N V ++ +Y RL D A +F ++ V +WN +I +
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSD 212
Query: 381 NGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYV 440
+G E AL F M E P+ T++ +S C+ L LS GK L N V
Sbjct: 213 SGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV 272
Query: 441 STALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGI 500
A IDM++KC + ++ +LF + + ++V N++I Y H G +AL+LF + +
Sbjct: 273 LGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSV 332
Query: 501 HPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
P TF S+L + +A ++ G ++ H +V K
Sbjct: 333 RPDKFTFSSVL-SSMNAVMLDHGADV-HSLVIK 363
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 89/235 (37%), Gaps = 37/235 (15%)
Query: 324 IQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD---------------------- 361
+ +++G + + +Y + + A +LFD
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 362 ---------ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT--ITTTL 410
E PE+ V +WN MISG G E + +F +M E P T I +L
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
C + G G I S N+ V +++DMY + G A +F +M +++ V
Sbjct: 146 VTCVRHGEQIHG----NAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVV 201
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEE 525
+WN +I G AL F M I P T ++ CS + +G++
Sbjct: 202 SWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 99/254 (38%), Gaps = 51/254 (20%)
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIF 477
S + K VH + Y + +Y K G++ A QLFD + +KNT+TWN +
Sbjct: 19 SPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLK 78
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
G +GY + AL LF EM + S T +S L +C G G +F DM ++ I
Sbjct: 79 GLFKNGYLNNALDLFDEMPERDV-VSWNTMISGLVSC---GFHEYGIRVFFDM-QRWEIR 133
Query: 538 P-------LAEHHAC--------------------------MVDILGRAGQLEKALEFIR 564
P LA C ++D+ R G + AL
Sbjct: 134 PTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFL 193
Query: 565 TMPVEPGPAVWGTLLGACKIHKNTDIA--RVASERLFELDPGSVGYYVLLSNIYSVGRNF 622
TM + W L+ +C N ++A + R E+ P Y+V
Sbjct: 194 TME-DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDE----------YTVSMVV 242
Query: 623 PKAASIREVAKKRK 636
+ +RE++K ++
Sbjct: 243 SICSDLRELSKGKQ 256
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
+S+++ +N A L H A +H+ +I G+ D A T L + F G+ A +F
Sbjct: 340 SSVLSSMN-AVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDG 398
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYT 105
D+ +N ++ G + N+ S+A++ L + +L PD T
Sbjct: 399 KDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVT 439
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 216 bits (550), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 201/396 (50%), Gaps = 1/396 (0%)
Query: 119 GMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR 178
G +H + + G G NL V SSLV Y + + A + FD M E+D ++W VI+ R
Sbjct: 203 GRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSR 261
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
+ +I +F M+ + + TV ++L A +E + L G + L K D +V
Sbjct: 262 KGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFV 321
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
T L+ +Y+KCG+IS R +F + + + + ++I+ + G E ++ LFR +
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHL 381
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
++ T+V ++ G L L + +K+ N + + L +Y + E A
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFN 441
Query: 359 LFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
+ + P + V +W AMISG + G AL +EM+ PNP T ++ L ACA S
Sbjct: 442 VLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSES 501
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFG 478
L G+ +H + K + N++V +ALI MYAKCG +SEA ++FDSM EKN V+W +I G
Sbjct: 502 LLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMG 561
Query: 479 YGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYAC 514
Y +G+ EALKL M G F +IL C
Sbjct: 562 YARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 219/451 (48%), Gaps = 12/451 (2%)
Query: 131 FGSNLFV-CSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVF 189
FG+NL C L DL + ARKVFD MPE++TV W +I G ++ D++ +F
Sbjct: 119 FGNNLISSCVRLGDLVY-------ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALF 171
Query: 190 RDMVANGVQ-VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSK 248
D V +G++ + V +L + E +G + K G + V + LV Y++
Sbjct: 172 EDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQ 230
Query: 249 CGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGL 308
CG++++A F M+ + D+I++ A+IS + G ++ +F +L + T+ +
Sbjct: 231 CGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSI 290
Query: 309 IPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTV 368
+ S L + VK ++ V T+L +Y++ EI RK+FD +
Sbjct: 291 LKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNT 350
Query: 369 AAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQL 428
W ++I+ + + G E A+SLF+ M N +T+ + L AC +G+L GK +H
Sbjct: 351 VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 429 IKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEA 488
I ++E N+Y+ + L+ +Y KCG +A + + ++ V+W +I G G+ EA
Sbjct: 411 IIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEA 470
Query: 489 LKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVD 548
L KEM+ G+ P+ T+ S L AC+++ + G I H + K + ++
Sbjct: 471 LDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI-HSIAKKNHALSNVFVGSALIH 529
Query: 549 ILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
+ + G + +A +MP E W ++
Sbjct: 530 MYAKCGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 188/361 (52%), Gaps = 4/361 (1%)
Query: 223 IQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
I +A K + Y L+S + GD+ AR +F + + + + + AMI GY G
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 283 IESSVKLFRELLVSGQRVSSSTM-VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVST 341
+ + LF + + G R ++ M V L+ + S L + G VK G + N V +
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVES 222
Query: 342 ALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTP 401
+L Y++ E+ A + FD EK V +W A+IS ++ G A+ +F M+ F P
Sbjct: 223 SLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP 282
Query: 402 NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
N T+ + L AC++ +L FG+ VH L+ + ++ +++V T+L+DMYAKCG IS+ R++F
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 462 DSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
D MS +NTVTW +II + G+G EA+ LF+ M + + +T +SIL AC G +
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 402
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGA 581
G+E+ H + K IE + +V + + G+ A ++ +P W ++
Sbjct: 403 LGKEL-HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRD-VVSWTAMISG 460
Query: 582 C 582
C
Sbjct: 461 C 461
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 183/398 (45%), Gaps = 5/398 (1%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
Q+H ++ G +L + L G A F + D+ + ++ S
Sbjct: 205 QVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKG 263
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDK---YGMLLHAHAIVDGFGSNLFVC 138
+I ++ + L P+ +T + A ++K +G +H+ + +++FV
Sbjct: 264 HGIKAIGMFIGM-LNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVG 322
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+SL+D+Y K + RKVFD M R+TV W ++I R + +++I +FR M +
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
++ TVV++L A + L +G + K ++ Y+ + LV LY KCG+ A +
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442
Query: 259 FGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHL 318
+ D++++ AMISG + G ++ +E++ G + T + + L
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502
Query: 319 HLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGY 378
+ SI K+ A+SN V +AL +Y++ + A ++FD PEK + +W AMI GY
Sbjct: 503 LIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGY 562
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
+NG AL L M F + T LS C +
Sbjct: 563 ARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 108/222 (48%), Gaps = 8/222 (3%)
Query: 1 MIQRNSIITFINKACN----LPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHAR 56
+I N + I +AC L ++HAQ+I N + ++ + L G +R A
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF 440
Query: 57 ALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD 116
+ + + D+ + ++ G S S ++ + ++ + P+ +TY+ + A +
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEM-IQEGVEPNPFTYSSALKACANS 499
Query: 117 K---YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVI 173
+ G +H+ A + SN+FV S+L+ +Y K V A +VFD MPE++ V+W +I
Sbjct: 500 ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMI 559
Query: 174 TGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQ 215
G RN + +++++ M A G +VD T+L +++
Sbjct: 560 MGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 183/363 (50%), Gaps = 16/363 (4%)
Query: 413 CAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTW 472
C +L K VH+ I S +I ++I+MY+ CG++ +A +F+SM E+N TW
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVN 532
+I + +G G +A+ F G P G F I +AC G + EG F M
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 533 KYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIAR 592
+Y I P EH+ +V +L G L++AL F+ +M EP +W TL+ ++H + +
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGD 368
Query: 593 VASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTT 652
+ + +LD + N S P +S K +++AK P N
Sbjct: 369 RCQDMVEQLDASRL-------NKESKAGLVPVKSSDLVKEKLQRMAKGP-------NYGI 414
Query: 653 HVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLA 712
+GD S +Y L+ L M EIGY + +LHDV++E K+ + H+E+ A
Sbjct: 415 RYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFA 474
Query: 713 IAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCG 772
+ T + IR++KNLRVC DCH A K +SKI R ++ RDA RFHH KDG+CSC
Sbjct: 475 FISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCR 534
Query: 773 DYW 775
+YW
Sbjct: 535 EYW 537
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 2/204 (0%)
Query: 281 GEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVS 340
G+++ +V++ + G V + + + L + + S IS+ S
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 341 TALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFT 400
++ +YS ++ A +F+ PE+ + W +I + +NG E A+ F
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 401 PNPVTITTTLSACAQLGSLSFGKW-VHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQ 459
P+ AC LG ++ G + K + P + +L+ M A+ G + EA +
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 460 LFDSMSEKNTVTWNTIIFGYGLHG 483
+SM E N W T++ +HG
Sbjct: 340 FVESM-EPNVDLWETLMNLSRVHG 362
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/531 (26%), Positives = 259/531 (48%), Gaps = 44/531 (8%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
LH + GF SN + +SL+ Y + A KVFDEMP+ D ++WN++++G V++
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
+ + I +F ++ + V + + L A A L +G I K G + V+
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 242 -LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRV 300
L+ +Y KCG + A L+F + + D +++NA+++ + NG++E + F ++
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----- 251
Query: 301 SSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF 360
P + + L I + VKSG +N A ++
Sbjct: 252 ---------PDTVTYNEL-----IDAF-VKSGDFNN-------------------AFQVL 277
Query: 361 DESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLS 420
+ P ++WN +++GY + + A F +M ++ + +++ L+A A L +
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVP 337
Query: 421 FGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYG 480
+G +H L+ + V++ALIDMY+KCG + A +F +M KN + WN +I GY
Sbjct: 338 WGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYA 397
Query: 481 LHGYGHEALKLFKEMLHSG-IHPSGVTFLSILYACSHAGLVREGE-EIFHDMVNKYRIEP 538
+G EA+KLF ++ + P TFL++L CSH + E F M+N+YRI+P
Sbjct: 398 RNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKP 457
Query: 539 LAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERL 598
EH ++ +G+ G++ +A + I+ W LLGAC K+ A+ + ++
Sbjct: 458 SVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKM 517
Query: 599 FEL-DPGSVGY-YVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIE 647
EL D Y Y+++SN+Y+ + + IR++ ++ + K G + I+
Sbjct: 518 IELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 42/289 (14%)
Query: 292 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLN 351
EL+ G++ +S +V L+ VS +G++ L + GY K G +SN+ +S +L Y +
Sbjct: 45 ELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSD 104
Query: 352 EIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
++ A K+FDE P+ V +WN+++SGY Q+G + + LF E+ ++ PN + T L+
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 412 ACAQLGSLSFGKWVHQLIKSKNLEP-NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV 470
ACA+L G +H + LE N+ V LIDMY KCG + +A +F M EK+TV
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV 224
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
+WN I+ +CS G + G FH M
Sbjct: 225 SWNAIV-----------------------------------ASCSRNGKLELGLWFFHQM 249
Query: 531 VNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL 579
N P + ++D ++G A + + MP P + W T+L
Sbjct: 250 PN-----PDTVTYNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTIL 292
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 197/488 (40%), Gaps = 86/488 (17%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGAT----RHARALFFSVRNPDIFLFNVLVKGF 77
Q+H + +G+ S+ T+L+ L F T A +F + +PD+ +N LV G+
Sbjct: 76 QLHGYVTKHGFVSN----TRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGY 131
Query: 78 SVNASPSSSIALYTHLRLRTNLAPD--NYTYAFTIAA----SPDDKYGMLLHAHAIVDGF 131
+ I L+ L R+++ P+ ++T A A SP G +H+ + G
Sbjct: 132 VQSGRFQEGICLFLELH-RSDVFPNEFSFTAALAACARLHLSP---LGACIHSKLVKLGL 187
Query: 132 -GSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFR 190
N+ V + L+D+Y K + A VF M E+DTV+WN ++ RN + + F
Sbjct: 188 EKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFH 247
Query: 191 DMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCG 250
M + D L+ + K G
Sbjct: 248 QMP---------------------------------------NPDTVTYNELIDAFVKSG 268
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM----- 305
D + A + + P+ ++N +++GY + + + + F ++ SG R ++
Sbjct: 269 DFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLA 328
Query: 306 VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPE 365
P+G L C+ K G S V++AL +YS+ + A +F P
Sbjct: 329 AVAALAVVPWGSLIHACAH-----KLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPR 383
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEF-TPNPVTITTTLSACAQLG---SLSF 421
K + WN MISGY +NG + A+ LF ++ F P+ T L+ C+ +
Sbjct: 384 KNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVML 443
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGL 481
G + +I ++P++ +LI + G + +A+Q+ FG+G
Sbjct: 444 G-YFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQE-------------FGFGY 489
Query: 482 HGYGHEAL 489
G AL
Sbjct: 490 DGVAWRAL 497
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 172/426 (40%), Gaps = 69/426 (16%)
Query: 168 AWNTVITGLVRNCYYDDSIQVFR---DMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQ 224
+W+T++ L R SI V R +++ +G + D++ +V +L + + +
Sbjct: 23 SWSTIVPALARF----GSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 225 CLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIE 284
K GF + + L+ Y + A +F + PD+I++N+++SGY +G +
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 285 SSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAIS------NSS 338
+ LF EL S + + + + LHL S G C+ S + N
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACA---RLHL--SPLGACIHSKLVKLGLEKGNVV 193
Query: 339 VSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE 398
V L +Y + +D A +F EK +WNA++
Sbjct: 194 VGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV----------------------- 230
Query: 399 FTPNPVTITTTLSACAQLGSLSFGKWV-HQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
++C++ G L G W HQ+ P+ LID + K G+ + A
Sbjct: 231 ------------ASCSRNGKLELGLWFFHQMPN-----PDTVTYNELIDAFVKSGDFNNA 273
Query: 458 RQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF----LSILYA 513
Q+ M N+ +WNTI+ GY EA + F +M H SGV F LSI+ A
Sbjct: 274 FQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM-----HSSGVRFDEYSLSIVLA 328
Query: 514 CSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA 573
A V + H +K ++ + ++D+ + G L+ A TMP
Sbjct: 329 AVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP-RKNLI 387
Query: 574 VWGTLL 579
VW ++
Sbjct: 388 VWNEMI 393
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 177/349 (50%), Gaps = 36/349 (10%)
Query: 330 KSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALS 389
K G S+ V TAL +Y + A K+FDE PE+ WN MI+G T G E AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 390 -------------------------------LFQEMMTTE-FTPNPVTITTTLSACAQLG 417
LF M+ + PN +TI L A LG
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 418 SLSFGKWVHQLIKSKNLEP-NIYVSTALIDMYAKCGNISEARQLFDSM--SEKNTVTWNT 474
L VH + + P +I V+ +LID YAKCG I A + F + KN V+W T
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 475 IIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREG-EEIFHDMVNK 533
+I + +HG G EA+ +FK+M G+ P+ VT +S+L ACSH GL E E F+ MVN+
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARV 593
Y+I P +H+ C+VD+L R G+LE+A + +P+E VW LLGAC ++ + ++A
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 594 ASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPG 642
+ +L EL+ G YVL+SNI+ F A R+ R +AK PG
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPG 499
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 161/338 (47%), Gaps = 52/338 (15%)
Query: 24 HAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNASP 83
H Q ++ Y+S+L K+ +L T L + +FLFN L++ +S+ +P
Sbjct: 38 HFQSLMQKYESNL----KIIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETP 93
Query: 84 SSSIALYTHL-RLR------TNLAP-DNYTYAFTIAASPDDKYGMLLHAHAIVD-----G 130
+ LY L RL +L P D++TY F + AS + ++ LL + G
Sbjct: 94 LHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLG 153
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVR-------NCYYD 183
F S+++V ++LV +Y + A KVFDEMPER+ V WN +ITGL C+ +
Sbjct: 154 FESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLE 213
Query: 184 ------------------------DSIQVFRDMVA-NGVQVDSTTVVTVLPAVAELQELG 218
++I +F MVA + ++ + T++ +LPAV L +L
Sbjct: 214 KMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLK 273
Query: 219 VGMGIQCLAFKFGFHR-DAYVLTGLVSLYSKCGDISTARLLFGMI--GKPDLIAYNAMIS 275
+ + K GF D V L+ Y+KCG I +A F I G+ +L+++ MIS
Sbjct: 274 MCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMIS 333
Query: 276 GYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS 313
+ +G + +V +F+++ G + + TM+ ++ S
Sbjct: 334 AFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACS 371
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 184/375 (49%), Gaps = 33/375 (8%)
Query: 229 KFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVK 288
K D ++ L+S+ S G+ A L+F + P +N MI + N + ++
Sbjct: 45 KHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALL 104
Query: 289 LFRELLVSGQ-RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY 347
LF +++S Q + T +I + L + G +K+G ++ L +Y
Sbjct: 105 LFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLY 164
Query: 348 SRLNEIDMARKLFD-------------------------------ESPEKTVAAWNAMIS 376
+ + D RK+FD + P + V +W AMI+
Sbjct: 165 FKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMIT 224
Query: 377 GYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEP 436
Y +N + A LF+ M + PN TI L A QLGSLS G+WVH
Sbjct: 225 AYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVL 284
Query: 437 NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLF-KEM 495
+ ++ TALIDMY+KCG++ +AR++FD M K+ TWN++I G+HG G EAL LF +
Sbjct: 285 DCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEME 344
Query: 496 LHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQ 555
+ + P +TF+ +L AC++ G V++G F M+ Y I P+ EH+ACM+ +L +A +
Sbjct: 345 EEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALE 404
Query: 556 LEKALEFIRTMPVEP 570
+EKA + +M +P
Sbjct: 405 VEKASNLVESMDSDP 419
Score = 154 bits (389), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 34/315 (10%)
Query: 10 FINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFL 69
F+ N L QIH ++I + +D + +L FG T++A +F +++P F
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFT 85
Query: 70 FNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGMLLHAHA 126
+N++++ SVN P ++ L+ + + D +T+ F I A S + G +H A
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYY---- 182
I GF +++F ++L+DLYFK + RKVFD+MP R V+W T++ GLV N
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 183 ---------------------------DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQ 215
D++ Q+FR M + V+ + T+V +L A +L
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 216 ELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMIS 275
L +G + A K GF D ++ T L+ +YSKCG + AR +F ++ L +N+MI+
Sbjct: 266 SLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMIT 325
Query: 276 GYTCNGEIESSVKLF 290
+G E ++ LF
Sbjct: 326 SLGVHGCGEEALSLF 340
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 110/275 (40%), Gaps = 34/275 (12%)
Query: 343 LTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTP- 401
L ++ S E A +F++ + WN MI + N AL LF MM + +
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 402 NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
+ T + AC S+ G VH L +++ L+D+Y KCG R++F
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 462 DSMSEKNTVTWNTIIFG-------------------------------YGLHGYGHEALK 490
D M ++ V+W T+++G Y + EA +
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 237
Query: 491 LFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDIL 550
LF+ M + P+ T +++L A + G + G + HD +K ++D+
Sbjct: 238 LFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWV-HDYAHKNGFVLDCFLGTALIDMY 296
Query: 551 GRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIH 585
+ G L+ A + M + A W +++ + +H
Sbjct: 297 SKCGSLQDARKVFDVMQGK-SLATWNSMITSLGVH 330
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/413 (31%), Positives = 213/413 (51%), Gaps = 28/413 (6%)
Query: 257 LLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF------RELLVSGQRVSSSTMVGLIP 310
L+F G PD +N ++ C+ + E S+++F LL +R + ++G
Sbjct: 65 LVFPRFGHPDKFLFNTLLK---CS-KPEDSIRIFANYASKSSLLYLNER-TFVFVLGACA 119
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSS-VSTALTTIYSRLNEIDMARKLFDESPEKTVA 369
S+ L + + G K G + S + T L Y++ ++ ARK+FDE PE+T
Sbjct: 120 RSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSV 179
Query: 370 AWNAMISGYTQ-----NGLTETALSLFQEMMT--TEFTPNPVTITTTLSACAQLGSLSFG 422
WNAMI GY N A+ LF+ + P T+ LSA +Q G L G
Sbjct: 180 TWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG 239
Query: 423 KWVHQLIKSKNLEP--NIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYG 480
VH I+ P ++++ TAL+DMY+KCG ++ A +F+ M KN TW ++ G
Sbjct: 240 SLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLA 299
Query: 481 LHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLA 540
L+G G+E L M SGI P+ +TF S+L A H GLV EG E+F M ++ + P+
Sbjct: 300 LNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVI 359
Query: 541 EHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFE 600
EH+ C+VD+LG+AG++++A +FI MP++P + +L AC I+ T + + L E
Sbjct: 360 EHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLE 419
Query: 601 LD------PGS-VGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLI 646
++ GS YV LSN+ + + + +R+ K+R++ PG + +
Sbjct: 420 IEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 149/324 (45%), Gaps = 36/324 (11%)
Query: 22 QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARAL-----FFSVRNPDIFLFNVLVKG 76
QIHAQL++NG D + KL +T + L F +PD FLFN L+K
Sbjct: 26 QIHAQLVINGCH-DNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLFNTLLK- 83
Query: 77 FSVNASPSSSIALYTHLRLRTNLAPDN-YTYAFTIAASPDDKYGMLLHAHAIVDGFGSNL 135
+ P SI ++ + +++L N T+ F + A L IV G L
Sbjct: 84 ---CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKL 140
Query: 136 -------FVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDD---- 184
+ ++L+ Y K + ARKVFDEMPER +V WN +I G C + D
Sbjct: 141 GFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY---CSHKDKGNH 197
Query: 185 ----SIQVFRDM--VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF--HRDA 236
++ +FR +GV+ TT+V VL A+++ L +G + K GF D
Sbjct: 198 NARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDV 257
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
++ T LV +YSKCG ++ A +F ++ ++ + +M +G NG + L + S
Sbjct: 258 FIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAES 317
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHL 320
G + + T L+ S + H+ L
Sbjct: 318 GIKPNEITFTSLL---SAYRHIGL 338
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 178/363 (49%), Gaps = 16/363 (4%)
Query: 413 CAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTW 472
C + +L + VH+ I + ++ A+I+MY+ C ++ +A ++F+ M E N+ T
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTL 188
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVN 532
++ + +GYG EA+ LF G P+G F + C+ G V+EG F M
Sbjct: 189 CVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYR 248
Query: 533 KYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIAR 592
+Y I P EH+ + +L +G L++AL F+ MP+EP VW TL+ ++H + ++
Sbjct: 249 EYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGD 308
Query: 593 VASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTT 652
+E + +LD L + S G KA+ V K+ P
Sbjct: 309 RCAELVEKLDA------TRLDKVSSAGLVATKASDF--VKKEPSTRSEP--------YFY 352
Query: 653 HVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLA 712
F D SH IY L L +++E+GY +T + E + + + E++A
Sbjct: 353 STFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIA 412
Query: 713 IAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCG 772
+ +L+ ++P + I ++ N+R+ DCH K +S IT R ++ RDA +H FK+G+C C
Sbjct: 413 VVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCN 472
Query: 773 DYW 775
+ W
Sbjct: 473 NLW 475
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 2/145 (1%)
Query: 341 TALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFT 400
A+ +YS +D A K+F+E PE M+ + NG E A+ LF
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 401 PNPVTITTTLSACAQLGSLSFGKWVHQ-LIKSKNLEPNIYVSTALIDMYAKCGNISEARQ 459
PN S C G + G Q + + + P++ ++ M A G++ EA
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 460 LFDSMSEKNTV-TWNTIIFGYGLHG 483
+ M + +V W T++ +HG
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHG 302
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 179/365 (49%), Gaps = 19/365 (5%)
Query: 413 CAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTW 472
C ++ +L + VH I L+ Y +I+MY+ C + +A +F+ M ++N+ TW
Sbjct: 122 CGEVEALEEARVVHDCITP--LDARSY--HTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVN 532
T+I +G G A+ +F + G P F ++ +AC G + EG F M
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 533 KYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIAR 592
Y + E + ++++L G L++AL+F+ M VEP +W TL+ C + ++
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Query: 593 VASERLFELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLI--EING 650
+E + +LD +S + G KA+ + KL + C +I +
Sbjct: 298 RFAELIKKLDASR------MSKESNAGLVAAKASD----SAMEKLKELRYCQMIRDDPKK 347
Query: 651 TTHVFVSGDRSHSHATAIYAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEK 710
H F +GD SH + + L +M +IG+ T VEEEEKE + S K
Sbjct: 348 RMHEFRAGDTSHLGTVSAF---RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNK 404
Query: 711 LAIAFALITTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICS 770
LA A A+I +E + +++N+R C+D H K IS IT R ++ RD ++H +K+G+CS
Sbjct: 405 LAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCS 464
Query: 771 CGDYW 775
C DYW
Sbjct: 465 CKDYW 469
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 346 IYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
+YS D A +F+E P++ W MI +NG E A+ +F + P+
Sbjct: 152 MYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEI 211
Query: 406 ITTTLSACAQLGSLSFGKW-VHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
AC +G ++ G + + + ++ +I+M A CG++ EA + M
Sbjct: 212 FKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERM 271
Query: 465 S-EKNTVTWNTIIFGYGLHGY 484
+ E + W T++ + GY
Sbjct: 272 TVEPSVEMWETLMNLCWVQGY 292
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 76/107 (71%)
Query: 669 YAMLEKLTGKMREIGYQTETVTSLHDVEEEEKELMVNVHSEKLAIAFALITTEPGTEIRI 728
Y L+ L ++R+ GY ET LHD++EE KE + HSE+LAIAF +I T PGT IR+
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRV 192
Query: 729 IKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 775
+KNLR+C DCH K +S I +R I+VRD RFHHF+DG CSCGDYW
Sbjct: 193 MKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/627 (20%), Positives = 253/627 (40%), Gaps = 35/627 (5%)
Query: 7 IITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR--- 63
II+ + K + A + L +G+ D+ S T L + G R A +F +
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 64 -NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLL 122
P + +NV++ F +P + I +APD YTY I K G L
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC---KRGSLH 295
Query: 123 HAHAIV------DGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWNTV 172
A V GF + ++L+D+Y K R A KV +EM V +N++
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 173 ITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF 232
I+ R+ D+++++ M G + D T T+L ++ M I G
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIG----KPDLIAYNAMISGYTCNGEIESSVK 288
+ + +Y G + +F I PD++ +N +++ + NG
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 289 LFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYS 348
+F+E+ +G T LI S G ++ + +G + S + +
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 349 RLNEIDMARKLFDESPEKTVA----AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
R + + K+ E + + +++ Y SL +E+ + P V
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
+ T + C++ L + +K + P+I +++ +Y + +++A + D M
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 465 SEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLV 520
E+ + T+N++++ + ++ ++ +E+L GI P +++ +++YA +
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 521 REGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM---PVEPGPAVWGT 577
R+ IF +M N I P + + E+A+ +R M P + +
Sbjct: 716 RDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 578 LL-GACKIHKNTDIARVASERLFELDP 603
++ G CK+++ D A++ E L LDP
Sbjct: 775 IVDGYCKLNRK-DEAKLFVEDLRNLDP 800
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 173/396 (43%), Gaps = 23/396 (5%)
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIG----KPDLIAYNAMISGYTCNGEIESS 286
GF D Y T L+S ++ G A +F + KP LI YN +++ + G +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVS-TALTT 345
+ E + S + + G LH + +K+ S V+ AL
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 346 IYSRLNEIDMARKLFDE------SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEF 399
+Y + + A K+ +E SP ++ +N++IS Y ++G+ + A+ L +M
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSP--SIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 400 TPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQ 459
P+ T TT LS + G + + + +++ +PNI A I MY G +E +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 460 LFDSMS----EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACS 515
+FD ++ + VTWNT++ +G +G E +FKEM +G P TF +++ A S
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 516 HAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG---QLEKALEFIRTMPVEPGP 572
G + ++ M++ + P + ++ L R G Q EK L + +P
Sbjct: 501 RCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 573 AVWGTLLGACKIHKNTDIARVASERLFE--LDPGSV 606
+ +LL A K + +E ++ ++P +V
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/539 (22%), Positives = 223/539 (41%), Gaps = 59/539 (10%)
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYY 182
+ G ++++ ++ ++ + K +V A K+F +M E + V +NTVI GL Y
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
D++ MV G++ T ++ + + +G + K GF + V L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLI----AYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
+ + + G ++ A + ++ L YN +I GY NG+ +++ +L +E+L G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 299 RVSSSTMVGLIPV---------------------SSPFGHLHLTCSIQGYC--------- 328
V+ + +I + SP G L LT I G C
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL-LTTLISGLCKHGKHSKAL 490
Query: 329 ------VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVA----AWNAMISGY 378
+ G + ++ S AL ++D A ++ E + ++N +ISG
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
+ A EM+ P+ T + + + + K + P++
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMSEKN----TVTWNTIIFGYGLHGYGHEALKLFKE 494
Y + +ID K E ++ FD M KN TV +N +I Y G AL+L ++
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 495 MLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG 554
M H GI P+ T+ S++ S V E + +F +M + +EP H+ ++D G+ G
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLG 729
Query: 555 QLEKALEFIRTM---PVEPGPAVWGTLLGACKIHKN-TDIARVASE-RLFELDPGSVGY 608
Q+ K +R M V P + ++G N T+ +R+ +E R + P S+ Y
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 122/564 (21%), Positives = 226/564 (40%), Gaps = 42/564 (7%)
Query: 26 QLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN----PDIFLFNVLVKGFSVNA 81
++ G D+ T G A LF + P++ FN ++ G +
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYA-----FTIAASPDDKYGMLLHAHAIVDGFGSNLF 136
+ ++ + + P TY+ T A D Y +L GF N+
Sbjct: 310 RYDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL--KEMTKKGFPPNVI 366
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERD----TVAWNTVITGLVRNCYYDDSIQVFRDM 192
V ++L+D + + + A ++ D M + + +NT+I G +N D++ ++ ++M
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
++ G V+ + +V+ + + +LT L+S K G
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 253 STA-RLLFGMIGKP---DLIAYNAMISGYTCNGEIESSVKLFRELLVSG---QRVSSSTM 305
S A L F + K D NA++ G G+++ + ++ +E+L G RVS +T+
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 306 V----GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
+ G + F L VK G ++ + L +N+++ A + +D
Sbjct: 547 ISGCCGKKKLDEAFMFLDEM-------VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 362 ESPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
+ V ++ MI G + TE F EMM+ PN V + A + G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS----EKNTVTWN 473
LS + + +K K + PN T+LI + + EA+ LF+ M E N +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
+I GYG G + L +EM +HP+ +T+ ++ + G V E + ++M K
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 534 YRIEPLAEHHACMVDILGRAGQLE 557
+ + + L + G LE
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLE 803
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 142/367 (38%), Gaps = 62/367 (16%)
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
S ++L+F+F G DT N ++ GL D++ ++ ++++ G
Sbjct: 487 SKALELWFQFLNKGFVV---------DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
+D + T++ ++L K G D Y + L+ + A
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 259 F------GMIGKPDLIAYNAMISGYTCNGE-IESSVKLFRELLVSGQRVSSSTMVGLIPV 311
+ GM+ PD+ Y+ MI G C E E + F E++ + ++ LI
Sbjct: 598 WDDCKRNGML--PDVYTYSVMIDG-CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 312 SSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE----SPEKT 367
G L + ++ G NS+ T+L S ++ ++ A+ LF+E E
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 368 VAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ 427
V + A+I GY + G L +EM + PN +T T
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV------------------- 755
Query: 428 LIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLHG 483
+I YA+ GN++EA +L + M EK +++T+ I+GY G
Sbjct: 756 ----------------MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Query: 484 YGHEALK 490
EA K
Sbjct: 800 GVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/539 (22%), Positives = 223/539 (41%), Gaps = 59/539 (10%)
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYY 182
+ G ++++ ++ ++ + K +V A K+F +M E + V +NTVI GL Y
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
D++ MV G++ T ++ + + +G + K GF + V L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLI----AYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
+ + + G ++ A + ++ L YN +I GY NG+ +++ +L +E+L G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 299 RVSSSTMVGLIPV---------------------SSPFGHLHLTCSIQGYC--------- 328
V+ + +I + SP G L LT I G C
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL-LTTLISGLCKHGKHSKAL 490
Query: 329 ------VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVA----AWNAMISGY 378
+ G + ++ S AL ++D A ++ E + ++N +ISG
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNI 438
+ A EM+ P+ T + + + + K + P++
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 439 YVSTALIDMYAKCGNISEARQLFDSMSEKN----TVTWNTIIFGYGLHGYGHEALKLFKE 494
Y + +ID K E ++ FD M KN TV +N +I Y G AL+L ++
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 495 MLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAG 554
M H GI P+ T+ S++ S V E + +F +M + +EP H+ ++D G+ G
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLG 729
Query: 555 QLEKALEFIRTM---PVEPGPAVWGTLLGACKIHKN-TDIARVASE-RLFELDPGSVGY 608
Q+ K +R M V P + ++G N T+ +R+ +E R + P S+ Y
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 122/564 (21%), Positives = 226/564 (40%), Gaps = 42/564 (7%)
Query: 26 QLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN----PDIFLFNVLVKGFSVNA 81
++ G D+ T G A LF + P++ FN ++ G +
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYA-----FTIAASPDDKYGMLLHAHAIVDGFGSNLF 136
+ ++ + + P TY+ T A D Y +L GF N+
Sbjct: 310 RYDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL--KEMTKKGFPPNVI 366
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERD----TVAWNTVITGLVRNCYYDDSIQVFRDM 192
V ++L+D + + + A ++ D M + + +NT+I G +N D++ ++ ++M
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
++ G V+ + +V+ + + +LT L+S K G
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 253 STA-RLLFGMIGKP---DLIAYNAMISGYTCNGEIESSVKLFRELLVSG---QRVSSSTM 305
S A L F + K D NA++ G G+++ + ++ +E+L G RVS +T+
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 306 V----GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
+ G + F L VK G ++ + L +N+++ A + +D
Sbjct: 547 ISGCCGKKKLDEAFMFLDEM-------VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 362 ESPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
+ V ++ MI G + TE F EMM+ PN V + A + G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS----EKNTVTWN 473
LS + + +K K + PN T+LI + + EA+ LF+ M E N +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
+I GYG G + L +EM +HP+ +T+ ++ + G V E + ++M K
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 534 YRIEPLAEHHACMVDILGRAGQLE 557
+ + + L + G LE
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLE 803
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 142/367 (38%), Gaps = 62/367 (16%)
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
S ++L+F+F G DT N ++ GL D++ ++ ++++ G
Sbjct: 487 SKALELWFQFLNKGFVV---------DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
+D + T++ ++L K G D Y + L+ + A
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 259 F------GMIGKPDLIAYNAMISGYTCNGE-IESSVKLFRELLVSGQRVSSSTMVGLIPV 311
+ GM+ PD+ Y+ MI G C E E + F E++ + ++ LI
Sbjct: 598 WDDCKRNGML--PDVYTYSVMIDG-CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 312 SSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE----SPEKT 367
G L + ++ G NS+ T+L S ++ ++ A+ LF+E E
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 368 VAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQ 427
V + A+I GY + G L +EM + PN +T T
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV------------------- 755
Query: 428 LIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLHG 483
+I YA+ GN++EA +L + M EK +++T+ I+GY G
Sbjct: 756 ----------------MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Query: 484 YGHEALK 490
EA K
Sbjct: 800 GVLEAFK 806
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 142/629 (22%), Positives = 254/629 (40%), Gaps = 71/629 (11%)
Query: 68 FLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAI 127
L + L+KG + +A+ + +H N+ P Y Y I K G++ A A+
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSH---GINIKP--YMYDCCICVMS--KEGVMEKAKAL 369
Query: 128 VDGFGSNLFV-----CSSLVDLYFKFSRVGLARKVFDEMPERDTV----AWNTVITGLVR 178
DG ++ + +SL++ Y + V ++ EM +R+ V + TV+ G+
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
+ D + + ++M+A+G + + T++ + G M + + G D +
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 239 LTGLVSLYSKCGDISTAR-LLFGMIG---KPDLIAYNAMISGYTCNGEIESSVKLFRELL 294
L+ SK + AR L M+ KP+ Y A ISGY E S+ K +E+
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
G + GLI G + CS V G + ++ T L + +++D
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 355 MARKLFDESPEKTVA----AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
A ++F E K +A ++ +I+G+++ G + A S+F EM+ TPN + L
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK--- 467
+ G + K + + K L PN +ID Y K G+++EA +LFD M K
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 468 ----------------NTVTWNTIIFGYGLHG-----------------YGHEALK--LF 492
N V IFG G +G LK +
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 493 KEMLHSGI----HPSGVTF-LSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACM- 546
++ P+ VT+ + I Y C L +E+FH M N + + + + +
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL-EAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 547 -VDILGRAGQLEKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIARVASERLFELDPGS 605
D +GR ++ + +EP ++ ++ A T A V +++F +
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 606 VGYYVLLSNIYSVGRNFPKAASIREVAKK 634
G + +S ++ F K + EVA+K
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEM-EVAEK 936
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 122/554 (22%), Positives = 218/554 (39%), Gaps = 80/554 (14%)
Query: 138 CSSLVDLYFKFSRVGLARKVFDEMPERDTV----AWNTVITGLVR--------------- 178
C L+D +++R+ L V+ M ER+ V ++ +I R
Sbjct: 189 CKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 248
Query: 179 ------NCYYDDSIQVFRDMVANG---------VQVDSTTVVTVLPA----VAELQELGV 219
D ++++ M+ G V +D + L + E+ LGV
Sbjct: 249 KEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 308
Query: 220 GMGIQCLAFKFG---FHRDAYVLTGLVS------------LYSKC-------GDISTARL 257
+ + R+A GLV +Y C G + A+
Sbjct: 309 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 258 LF-GMIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSS 313
LF GMI P AY ++I GY + +L E+ +S T ++
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 314 PFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVA---- 369
G L +I + SG N + T L + + + A ++ E E+ +A
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 370 AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSL-SFGKWVHQL 428
+N++I G ++ + A S EM+ PN T +S + S K+V ++
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 429 IKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTV----TWNTIIFGYGLHGY 484
+ L PN + T LI+ Y K G + EA + SM ++ + T+ ++ G +
Sbjct: 549 RECGVL-PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 485 GHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHA 544
+A ++F+EM GI P ++ ++ S G +++ IF +MV + + P +
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPNVIIYN 666
Query: 545 CMVDILGRAGQLEKALEFIRTMPVE---PGPAVWGTLL-GACKIHKNTDIARVASE-RLF 599
++ R+G++EKA E + M V+ P + T++ G CK + R+ E +L
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 600 ELDPGSVGYYVLLS 613
L P S Y L+
Sbjct: 727 GLVPDSFVYTTLVD 740
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 152/368 (41%), Gaps = 40/368 (10%)
Query: 70 FNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVD 129
+ VL+ G N + ++ +R + +APD ++Y I K G + A +I D
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGK-GIAPDVFSYGVLINGFS--KLGNMQKASSIFD 651
Query: 130 -----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNC 180
G N+ + + L+ + + + A+++ DEM + + V + T+I G ++
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV-- 238
++ ++F +M G+ DS T++ L ++ + I FG ++
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI------FGTNKKGCASS 765
Query: 239 ---LTGLVSLYSKCGDISTA-----RLL---FGMIGKPDLIAYNAMISGYTCNGEIESSV 287
L++ K G RL+ F GKP+ + YN MI G +E++
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG---------AISNSS 338
+LF ++ + + T L+ G + + +G I N+
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
Query: 339 VSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTE 398
+ +TT L + A+ D+ + +++ A++SG+ + G E A + + M+ +
Sbjct: 886 LKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Query: 399 FTPNPVTI 406
+ P+ T+
Sbjct: 946 YIPDSATV 953
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 195/428 (45%), Gaps = 34/428 (7%)
Query: 148 FSRVGLARKVFD---EMPERD----TVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVD 200
+S GL + F+ MP + +NTVI GL ++ Y+ + +VF +M+ +G+ D
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 201 STTVVTVLPA------VAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
STT ++L V E +++ M + + D + ++SL+++ G++
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVV------PDLVCFSSMMSLFTRSGNLDK 393
Query: 255 ARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
A + F + + PD + Y +I GY G I ++ L E+L G + T ++
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK---- 366
L + + +S T L + +L + A +LF + EK
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH 426
V +N ++ G+ + G +TA ++ +M++ E P P++ + ++A G L+ V
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 427 QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLH 482
+ SKN++P + + ++I Y + GN S+ + M + + +++NT+I+G+
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 483 GYGHEALKLFKEM--LHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLA 540
+A L K+M G+ P T+ SIL+ ++E E + M+ + + P
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER-GVNPDR 692
Query: 541 EHHACMVD 548
+ CM++
Sbjct: 693 STYTCMIN 700
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 44/258 (17%)
Query: 369 AAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQL 428
+ ++ +I Y Q A F + + FT + + + ++G + V+Q
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 429 IKSKNLEPNIYVST-----------------------------------ALIDMYAKCGN 453
I + N+Y LI Y+ G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 454 ISEARQLFDSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLS 509
+ EA +L ++M K T+NT+I G HG A ++F EML SG+ P T+ S
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 510 ILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEF---IRTM 566
+L G V E E++F DM ++ + P + M+ + R+G L+KAL + ++
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 567 PVEPGPAVWGTLL-GACK 583
+ P ++ L+ G C+
Sbjct: 405 GLIPDNVIYTILIQGYCR 422
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 178/427 (41%), Gaps = 38/427 (8%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
N++I + K ++ A+++ +G D + L + G +F +R+
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 65 ----PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGM 120
PD+ F+ ++ F+ + + ++ + ++ L PDN Y I + GM
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK-EAGLIPDNVIYTILIQGYC--RKGM 425
Query: 121 L-----LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNT 171
+ L + G ++ ++++ K +G A K+F+EM ER D+
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 172 VITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFG 231
+I G + +++++F+ M +++D T T+L ++ ++ I
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 232 FHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIGK---PDLIAYNAMISGYTCNGEIESSV 287
+ LV+ G ++ A R+ MI K P ++ N+MI GY +G
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 288 KLFRELLVSG---QRVSSSTMV-GLIP---VSSPFGHLHLTCSIQGYCVKSGAISNSSVS 340
+++ G +S +T++ G + +S FG + QG G + +
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG-----GLVPDVFTY 660
Query: 341 TALTTIYSRLNEIDMA----RKLFDESPEKTVAAWNAMISGY-TQNGLTETALSLFQEMM 395
++ + R N++ A RK+ + + + MI+G+ +Q+ LTE A + EM+
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE-AFRIHDEML 719
Query: 396 TTEFTPN 402
F+P+
Sbjct: 720 QRGFSPD 726
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/566 (21%), Positives = 247/566 (43%), Gaps = 43/566 (7%)
Query: 150 RVGLARKVFDEM----PERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVV 205
+V A +F+ M P + +N + + + R YD + + M NG++ D T+
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 206 TVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFG----M 261
++ ++L + A+K G+ D + LV+ + G +S A L M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 262 IGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGH---- 317
+PDL+ + +I+G G + ++ L ++ G + T ++ G+
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 318 LHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA----WNA 373
L L ++ +K+ + S V +L + D A LF+E K + A +++
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLC----KDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 374 MISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKN 433
+I G +G + + +EM+ P+ VT + + + G L K ++ + ++
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 434 LEPNIYVSTALIDMYAKCGNISEARQLFDSM----SEKNTVTWNTIIFGYGLHGYGHEAL 489
+ P+ +LID + K + EA Q+FD M E + VT++ +I Y + +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 490 KLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDI 549
+LF+E+ G+ P+ +T+ +++ +G + +E+F +MV++ + P + ++D
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDG 464
Query: 550 LGRAGQLEKALEFIRTMP---VEPGPAVWGTLL-GACKIHKNTDI-ARVASERLFELDPG 604
L G+L KALE M + G ++ ++ G C K D + S + P
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 605 SVGYYVLLSNIYSVGRNFPKAASIREVAKKRKLAKTPGCTLIEINGTTHVFVSGDRSHSH 664
V Y V++ + K S+ E + K GCT + T ++ + R+H
Sbjct: 525 VVTYNVMIGGLC-------KKGSLSEADMLFRKMKEDGCTPDDF--TYNILI---RAHLG 572
Query: 665 ATAIYAMLEKLTGKMREIGYQTETVT 690
+ + + +E L +M+ G+ ++ T
Sbjct: 573 GSGLISSVE-LIEEMKVCGFSADSST 597
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 202/506 (39%), Gaps = 67/506 (13%)
Query: 29 LNGYQSDLASIT-------KLTQKLFDFGATRHARALFFSVRNPDIFLFNVLVKGFSVNA 81
LNG + D+ ++T + + LF F A L + PD F+ LV GF +
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYE---PDTITFSTLVNGFCLEG 154
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVD-----GFGSNLF 136
S ++AL + + PD T + I G + A ++D GF +
Sbjct: 155 RVSEAVALVDRM-VEMKQRPDLVTVSTLINGLC--LKGRVSEALVLIDRMVEYGFQPDEV 211
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERD----TVAWNTVITGLVRNCYYDDSIQVFRDM 192
+++ K LA +F +M ER+ V ++ VI L ++ +DD++ +F +M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
G++ D T +++ G D G
Sbjct: 272 EMKGIKADVVTYSSLIG---------------------GLCNDGKWDDG----------- 299
Query: 253 STARLLFGMIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLI 309
A++L MIG+ PD++ ++A+I + G++ + +L+ E++ G + T LI
Sbjct: 300 --AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Query: 310 PVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK--- 366
LH + V G + + L Y + +D +LF E K
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 367 -TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
+N ++ G+ Q+G A LFQEM++ P+ VT L G L+ +
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 477
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGL 481
+ ++ + I + +I + +A LF S+S+K + VT+N +I G
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTF 507
G EA LF++M G P T+
Sbjct: 538 KGSLSEADMLFRKMKEDGCTPDDFTY 563
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 195/451 (43%), Gaps = 31/451 (6%)
Query: 106 YAFTIAASPDDKYGMLLHAHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFD- 159
Y TI + + LL A +++ G+ + S+LV+ + RV A + D
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 160 --EMPER-DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQE 216
EM +R D V +T+I GL +++ + MV G Q D T VL + +
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 217 LGVGMGIQCLAFKFGFHRD--AYVLTGLVSLYSKC--GDISTARLLFG---MIG-KPDLI 268
+ + + F+ R+ A V+ + + S C G A LF M G K D++
Sbjct: 226 SALALDL----FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 269 AYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYC 328
Y+++I G +G+ + K+ RE++ T LI V G L +
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLFD----ESPEKTVAAWNAMISGYTQNGLT 384
+ G ++ +L + + N + A ++FD + E + ++ +I+ Y +
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTAL 444
+ + LF+E+ + PN +T T + Q G L+ K + Q + S+ + P++ L
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 445 IDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGH-----EALKLFKEMLHSG 499
+D G +++A ++F+ M +K+ +T I+ +HG + +A LF + G
Sbjct: 462 LDGLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 500 IHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
+ P VT+ ++ G + E + +F M
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 148/365 (40%), Gaps = 55/365 (15%)
Query: 1 MIQRNSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFF 60
++Q + +I + K + + ++ + G ++D+ + + L L + G +
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 61 SV--RN--PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD 116
+ RN PD+ F+ L+ F + LY + R +APD TY I
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-GIAPDTITYNSLIDGFC-- 361
Query: 117 KYGMLLHAHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTV 167
K L A+ + D G ++ S L++ Y K RV ++F E+ + +T+
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 168 AWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELG--------- 218
+NT++ G ++ + + ++F++MV+ GV T +L + + EL
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 219 ------VGMGI-------QCLAFKF-------------GFHRDAYVLTGLVSLYSKCGDI 252
+G+GI C A K G D ++ K G +
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSL 541
Query: 253 STARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGL 308
S A +LF + + PD YN +I + + SSV+L E+ V G SST+ +
Sbjct: 542 SEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMV 601
Query: 309 IPVSS 313
I + S
Sbjct: 602 IDMLS 606
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/501 (22%), Positives = 217/501 (43%), Gaps = 22/501 (4%)
Query: 154 ARKVFDEM----PERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLP 209
A +F EM P V +N +++ + + +D I + M + D + ++
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 210 AVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL----FGMIGKP 265
+L + + + K G+ D L+ L++ Y IS A L F M +P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 266 DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQ 325
+ + +N +I G + + +V L ++ G + T ++ G + L S+
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 326 GYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK----TVAAWNAMISGYTQN 381
K ++ + T + ++ A LF E K V +N++I
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 382 GLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVS 441
G A L +M+ + PN VT + + A + G L + ++ + ++++P+I+
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 442 TALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLH 497
++LI+ + + EA+ +F+ M K N VT+NT+I G+ E ++LF+EM
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 498 SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLE 557
G+ + VT+ +++ AG ++IF MV+ + P ++ ++D L + G+LE
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLE 482
Query: 558 KAL---EFIRTMPVEPGPAVWGTLL-GACKIHKNTDIARV-ASERLFELDPGSVGYYVLL 612
KAL E+++ +EP + ++ G CK K D + S L + P + Y ++
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 613 SNIYSVGRNFPKAASIREVAK 633
S G A RE+ +
Sbjct: 543 SGFCRKGLKEEADALFREMKE 563
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 199/491 (40%), Gaps = 67/491 (13%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLH- 123
PDI + L+ G+ S ++AL + + P+ T+ I +G+ LH
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFV-MEYQPNTVTFNTLI-------HGLFLHN 199
Query: 124 ----AHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWN 170
A A++D G +LF ++V+ K + LA + +M E D V +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
T+I L +D++ +F +M G++ P V L I+CL +
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIR----------PNVVTYNSL-----IRCLC-NY 303
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK---PDLIAYNAMISGYTCNGEIESSV 287
G DA +RLL MI + P+++ ++A+I + G++ +
Sbjct: 304 GRWSDA------------------SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY 347
KL+ E++ T LI L + + N L +
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 348 SRLNEIDMARKLFDESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPNP 403
+ ++ +LF E ++ + +N +I G Q G + A +F++M++ P+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 404 VTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDS 463
+T + L + G L V + ++ +EP+IY +I+ K G + + LF S
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 464 MSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGL 519
+S K N + + T+I G+ G EA LF+EM G P+ T+ +++ A G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 520 VREGEEIFHDM 530
E+ +M
Sbjct: 586 KAASAELIKEM 596
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/519 (20%), Positives = 206/519 (39%), Gaps = 61/519 (11%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARAL----FF 60
N +I + LP + +++ GY+ D+ +++ L A AL F
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 61 SVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDDK 117
P+ FN L+ G ++ S ++AL + R PD +TY + D
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDID 237
Query: 118 YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVI 173
+ L +++ + ++++D + V A +F EM + + V +N++I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 174 TGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH 233
L + D+ ++ DM+ + + T ++ A + +L + K
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 234 RDAYVLTGLVSLYSKCGDISTARLLFG-MIGK---PDLIAYNAMISGYTCNGEIESSVKL 289
D + + L++ + + A+ +F MI K P+++ YN +I G+ +E ++L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 290 FRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSR 349
FRE+ QR G + N+ L +
Sbjct: 418 FREM---SQR--------------------------------GLVGNTVTYNTLIQGLFQ 442
Query: 350 LNEIDMARKLF-----DESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
+ DMA+K+F D P + ++ ++ G + G E AL +F+ + ++ P+
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDII-TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
T + + G + G + + K ++PN+ + T +I + + G EA LF M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 465 SEKNTV----TWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
E T+ T+NT+I G + +L KEM G
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 208/489 (42%), Gaps = 63/489 (12%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLH- 123
P+I + L+ G+ + S ++AL + + T P+ T+ I +G+ LH
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFV-TGYQPNTVTFNTLI-------HGLFLHN 200
Query: 124 ----AHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWN 170
A A++D G +L +V+ K LA + ++M E + +N
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
T+I GL + + DD++ +F++M G++ + T +++ + + +
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESS 286
+ D + + L+ + K G + A L+ + K P ++ Y+++I+G+ + ++ +
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
++F E +VS P + L I+G+C
Sbjct: 381 KQMF-EFMVSKH---------CFPDVVTYNTL-----IKGFCK----------------- 408
Query: 347 YSRLNE-IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
Y R+ E +++ R++ +N +I G Q G + A +F+EM++ PN +T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 406 ITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
T L + G L V + ++ +EP IY +I+ K G + + LF ++S
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 466 EK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
K + V +NT+I G+ G EA LFKEM G P+ + +++ A G
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 522 EGEEIFHDM 530
E+ +M
Sbjct: 589 ASAELIKEM 597
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 207/456 (45%), Gaps = 20/456 (4%)
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
DD++ +F +MV + +L A+A++ + V + + G + Y + L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 243 VSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
++ + + + A + G + K P+++ +++++GY + I +V L ++ V+G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+ ++ T LI ++ V G + + + + D+A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 359 LFDESP----EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
L ++ E V +N +I G + + AL+LF+EM T PN VT ++ +S
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 415 QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTV 470
G S + + + + P+++ +ALID + K G + EA +L+D M ++ + V
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
T++++I G+ +H EA ++F+ M+ P VT+ +++ V EG E+F +M
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 531 VNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM---PVEPGPAVWGTLL-GACKIHK 586
+ + ++ ++ L +AG + A E + M V P + TLL G CK K
Sbjct: 423 SQRGLVGNTVTYNI-LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 587 NTDIARVASERL--FELDPGSVGYYVLLSNIYSVGR 620
+ A V E L +++P Y +++ + G+
Sbjct: 482 -LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 137/312 (43%), Gaps = 29/312 (9%)
Query: 9 TFINKACNLPHLA---QIHAQLILNGYQSDLASITKLTQKLFDFG----ATRHARALFFS 61
T I+ C H+ + ++ G + ++ + + L L ++G A+R +
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 62 VRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYA-----FTIAASPDD 116
NPD+F F+ L+ F + LY + ++ ++ P TY+ F + D+
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 117 KYGM---LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAW 169
M ++ H D N +L+ + K+ RV +VF EM +R +TV +
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYN-----TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 170 NTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFK 229
N +I GL + D + ++F++MV++GV + T T+L + + +L M + +
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 230 FGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIG----KPDLIAYNAMISGYTCNGEIES 285
Y ++ K G + LF + KPD++AYN MISG+ G E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 286 SVKLFRELLVSG 297
+ LF+E+ G
Sbjct: 555 ADALFKEMKEDG 566
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 220/531 (41%), Gaps = 70/531 (13%)
Query: 32 YQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFL----FNVLVKGFSVNASPSSSI 87
+ SD Q L DFG R AR +F + N + L NV + S + +++
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 230
Query: 88 AL----YTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIV-----DGFGSNLFVC 138
+ + + + N+A N F + G + AH ++ G+ ++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVC------QLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
S++V+ Y +F + K+ + M + ++ + ++I L R C ++ + F +M+
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 195 NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
G+ LP D V T L+ + K GDI
Sbjct: 345 QGI----------LP-------------------------DTVVYTTLIDGFCKRGDIRA 369
Query: 255 A-RLLFGMIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
A + + M + PD++ Y A+ISG+ G++ + KLF E+ G S T LI
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE----SPEK 366
GH+ + + +++G N T L + ++D A +L E +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH 426
+ +N++++G ++G E A+ L E + VT TT + A + G + + +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 427 QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLH 482
+ + K L+P I L++ + G + + +L + M K N T+N+++ Y +
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 483 GYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
A ++K+M G+ P G T+ +++ A ++E +F +M K
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 200/479 (41%), Gaps = 52/479 (10%)
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTV----AWNTVITGLVRNCYYD-DS 185
+GS+ V + F + AR+VF++M V + N +T L ++CY +
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 230
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
I VFR+ GV + + V+ V +L G ++A+ L L+ L
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQL----------------GRIKEAHHLLLLMEL 274
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM 305
PD+I+Y+ +++GY GE++ KL + G + +S
Sbjct: 275 KGY---------------TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 306 VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF----- 360
+I + L ++ G + ++ V T L + + +I A K F
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 361 -DESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSL 419
D +P+ V + A+ISG+ Q G A LF EM P+ VT T ++ + G +
Sbjct: 380 RDITPD--VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 420 SFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS----EKNTVTWNTI 475
VH + PN+ T LID K G++ A +L M + N T+N+I
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 476 IFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYR 535
+ G G EA+KL E +G++ VT+ +++ A +G + + +EI +M+ K
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-G 556
Query: 536 IEPLAEHHACMVDILGRAGQL---EKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIA 591
++P +++ G L EK L ++ + P + +L+ I N A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/423 (19%), Positives = 168/423 (39%), Gaps = 26/423 (6%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIA--------ASPDD 116
PD+ ++ +V G+ L ++ R L P++Y Y I A ++
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMK-RKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERD----TVAWNTV 172
+ + I G + V ++L+D + K + A K F EM RD + + +
Sbjct: 338 AF-----SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 173 ITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF 232
I+G + ++ ++F +M G++ DS T ++ + + + + G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVK 288
+ T L+ K GD+ +A L + K P++ YN++++G +G IE +VK
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 289 LFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYS 348
L E +G + T L+ G + I + G L +
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 349 RLNEIDMARKLFDESPEKTVA----AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
++ KL + K +A +N+++ Y + A +++++M + P+
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
T + + ++ ++ Q +K K ++ + LI + K EAR++FD M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 465 SEK 467
+
Sbjct: 693 RRE 695
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/525 (19%), Positives = 201/525 (38%), Gaps = 106/525 (20%)
Query: 5 NSIITFINKACNLPHLAQIHAQLIL---NGYQSDLASITKLTQKLFDFGATRHARALFFS 61
N +I F+ C L + + H L+L GY D+ S + + FG L
Sbjct: 250 NIVIHFV---CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 62 VR----NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI------- 110
++ P+ +++ ++ + + ++ + +R + PD Y I
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRG 365
Query: 111 ---AASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEM----PE 163
AAS K+ +H+ I ++ ++++ + + + A K+F EM E
Sbjct: 366 DIRAAS---KFFYEMHSRDIT----PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 164 RDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI 223
D+V + +I G + + D+ +V M+ G S VVT
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC---SPNVVT----------------- 458
Query: 224 QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTC 279
T L+ K GD+ +A L + K P++ YN++++G
Sbjct: 459 ---------------YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 280 NGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSV 339
+G IE +VKL E +G + T L + YC KSG + +
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTL---------------MDAYC-KSGEMDKAQ- 546
Query: 340 STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEF 399
++ +++ + + T+ +N +++G+ +G+ E L M+
Sbjct: 547 --------------EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 400 TPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQ 459
PN T + + +L +++ + S+ + P+ L+ + K N+ EA
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 460 LFDSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGI 500
LF M K + T++ +I G+ EA ++F +M G+
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 220/531 (41%), Gaps = 70/531 (13%)
Query: 32 YQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFL----FNVLVKGFSVNASPSSSI 87
+ SD Q L DFG R AR +F + N + L NV + S + +++
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 230
Query: 88 AL----YTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIV-----DGFGSNLFVC 138
+ + + + N+A N F + G + AH ++ G+ ++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVC------QLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
S++V+ Y +F + K+ + M + ++ + ++I L R C ++ + F +M+
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 195 NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
G+ LP D V T L+ + K GDI
Sbjct: 345 QGI----------LP-------------------------DTVVYTTLIDGFCKRGDIRA 369
Query: 255 A-RLLFGMIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
A + + M + PD++ Y A+ISG+ G++ + KLF E+ G S T LI
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 311 VSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE----SPEK 366
GH+ + + +++G N T L + ++D A +L E +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVH 426
+ +N++++G ++G E A+ L E + VT TT + A + G + + +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 427 QLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLH 482
+ + K L+P I L++ + G + + +L + M K N T+N+++ Y +
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 483 GYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
A ++K+M G+ P G T+ +++ A ++E +F +M K
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 200/479 (41%), Gaps = 52/479 (10%)
Query: 131 FGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTV----AWNTVITGLVRNCYYD-DS 185
+GS+ V + F + AR+VF++M V + N +T L ++CY +
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 230
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
I VFR+ GV + + V+ V +L G ++A+ L L+ L
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQL----------------GRIKEAHHLLLLMEL 274
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM 305
PD+I+Y+ +++GY GE++ KL + G + +S
Sbjct: 275 KGY---------------TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 306 VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF----- 360
+I + L ++ G + ++ V T L + + +I A K F
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 361 -DESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSL 419
D +P+ V + A+ISG+ Q G A LF EM P+ VT T ++ + G +
Sbjct: 380 RDITPD--VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 420 SFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS----EKNTVTWNTI 475
VH + PN+ T LID K G++ A +L M + N T+N+I
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 476 IFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYR 535
+ G G EA+KL E +G++ VT+ +++ A +G + + +EI +M+ K
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-G 556
Query: 536 IEPLAEHHACMVDILGRAGQL---EKALEFIRTMPVEPGPAVWGTLLGACKIHKNTDIA 591
++P +++ G L EK L ++ + P + +L+ I N A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/423 (19%), Positives = 168/423 (39%), Gaps = 26/423 (6%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIA--------ASPDD 116
PD+ ++ +V G+ L ++ R L P++Y Y I A ++
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMK-RKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 117 KYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERD----TVAWNTV 172
+ + I G + V ++L+D + K + A K F EM RD + + +
Sbjct: 338 AF-----SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 173 ITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF 232
I+G + ++ ++F +M G++ DS T ++ + + + + G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVK 288
+ T L+ K GD+ +A L + K P++ YN++++G +G IE +VK
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 289 LFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYS 348
L E +G + T L+ G + I + G L +
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 349 RLNEIDMARKLFDESPEKTVA----AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
++ KL + K +A +N+++ Y + A +++++M + P+
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSM 464
T + + ++ ++ Q +K K ++ + LI + K EAR++FD M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 465 SEK 467
+
Sbjct: 693 RRE 695
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/525 (19%), Positives = 201/525 (38%), Gaps = 106/525 (20%)
Query: 5 NSIITFINKACNLPHLAQIHAQLIL---NGYQSDLASITKLTQKLFDFGATRHARALFFS 61
N +I F+ C L + + H L+L GY D+ S + + FG L
Sbjct: 250 NIVIHFV---CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 62 VR----NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI------- 110
++ P+ +++ ++ + + ++ + +R + PD Y I
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRG 365
Query: 111 ---AASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEM----PE 163
AAS K+ +H+ I ++ ++++ + + + A K+F EM E
Sbjct: 366 DIRAAS---KFFYEMHSRDIT----PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 164 RDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI 223
D+V + +I G + + D+ +V M+ G S VVT
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC---SPNVVT----------------- 458
Query: 224 QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTC 279
T L+ K GD+ +A L + K P++ YN++++G
Sbjct: 459 ---------------YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 280 NGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSV 339
+G IE +VKL E +G + T L + YC KSG + +
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTL---------------MDAYC-KSGEMDKAQ- 546
Query: 340 STALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEF 399
++ +++ + + T+ +N +++G+ +G+ E L M+
Sbjct: 547 --------------EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 400 TPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQ 459
PN T + + +L +++ + S+ + P+ L+ + K N+ EA
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 460 LFDSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGI 500
LF M K + T++ +I G+ EA ++F +M G+
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 211/490 (43%), Gaps = 30/490 (6%)
Query: 157 VFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQE 216
V D P + V + T+I G + D + +F+ M G++ D T++ +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 217 LGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIG----KPDLIAYNA 272
LG+G + A G D V + + +Y K GD++TA +++ + P+++ Y
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 273 MISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG 332
+I G +G I + ++ ++L G S T LI G+L ++ +K G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 333 AISNSSVSTALTTIYSR----LNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
+ + L S+ L+ + + K+ +S V +N++I G+ + + AL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 389 SLFQEMMTTEFTPNPVTITTTLSA-------CAQLGSLSFGKWVHQLIKSKNLEPNIYVS 441
+F+ M P+ T TT + C + + G + L++ + +I V
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADIAVC 575
Query: 442 TALIDMYAKCGNISEARQLFDSM----SEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH 497
+I + KC I +A + F+++ E + VT+NT+I GY EA ++F+ +
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635
Query: 498 SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLE 557
+ P+ VT +++ + +F M K +P A + C++D ++ +E
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIE 694
Query: 558 KALEFIRTMP---VEPGPAVWGTLL-GACK---IHKNTDIARVASERLFELDPGSVGYYV 610
+ + M + P + ++ G CK + + T+I A + +L P V Y +
Sbjct: 695 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA--KLLPDVVAYAI 752
Query: 611 LLSNIYSVGR 620
L+ VGR
Sbjct: 753 LIRGYCKVGR 762
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 214/494 (43%), Gaps = 30/494 (6%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGML--- 121
P++ F L+ GF + L+ + R + PD Y+ I K GML
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAYSTLIDGYF--KAGMLGMG 340
Query: 122 --LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEM----PERDTVAWNTVITG 175
L + A+ G ++ V SS +D+Y K + A V+ M + V + +I G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
L ++ ++ ++ ++ G++ T +++ + L G + K G+ D
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 236 AYVLTGLVSLYSKCGDISTA-RLLFGMIGKP---DLIAYNAMISGYTCNGEIESSVKLFR 291
+ LV SK G + A R M+G+ +++ +N++I G+ + ++K+FR
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 292 ELLVSGQRVSSSTMVGLIPVS----SPFGHLHLTCSIQGY-CVKSGAIS-NSSVSTALTT 345
+ + G + +T ++ VS + H+ T +Q + ++ IS + +V +
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 580
Query: 346 IYSRLNEIDMARKLFDE----SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTP 401
+ + + I+ A K F+ E + +N MI GY + A +F+ + T F P
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640
Query: 402 NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
N VT+T + + + + ++ K +PN L+D ++K +I + +LF
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Query: 462 DSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHA 517
+ M EK + V+++ II G G EA +F + + + + P V + ++
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 760
Query: 518 GLVREGEEIFHDMV 531
G + E ++ M+
Sbjct: 761 GRLVEAALLYEHML 774
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 203/507 (40%), Gaps = 119/507 (23%)
Query: 256 RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKL--------FRELLVSGQRVSSSTMVG 307
+L G I + A+ ++ C GE+ ++ FR +VS +V V
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD 265
Query: 308 LIPVSSPFGHLHLTCS-----------IQGYCVKS---------------GAISNSSVST 341
I V+S L L C I G+C + G + +
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 342 ALTTIYSRLNEIDMARKLFDESPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTT 397
L Y + + M KLF ++ K V +++ I Y ++G TA +++ M+
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 398 EFTPNPVTITTTLSACAQLGSL--SFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNIS 455
+PN VT T + Q G + +FG + Q++K + +EP+I ++LID + KCGN+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMY-GQILK-RGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 456 EARQLFDSMSEK---------------------------------------NTVTWNTII 476
L++ M + N V +N++I
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYA-------CSHAGLVREGEEIFHD 529
G+ EALK+F+ M GI P TF +++ C H G ++F D
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI-GLQLF-D 561
Query: 530 MVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM---PVEPGPAVWGTLL-GACKIH 585
++ + +I ++ +L + ++E A +F + +EP + T++ G C +
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 586 KNTDIARVASERLFEL------DPGSVGYYVLLSNIYSVGRNFPKAASIRE---VAKK-- 634
+ + +ER+FEL P +V +L I+ + +N +IR +A+K
Sbjct: 622 RLDE-----AERIFELLKVTPFGPNTVTLTIL---IHVLCKNNDMDGAIRMFSIMAEKGS 673
Query: 635 RKLAKTPGCTL------IEINGTTHVF 655
+ A T GC + ++I G+ +F
Sbjct: 674 KPNAVTYGCLMDWFSKSVDIEGSFKLF 700
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 209/492 (42%), Gaps = 69/492 (14%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLH- 123
PDI + L+ G+ + S ++AL + + PD +T+ I +G+ LH
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQM-VEMGYKPDTFTFTTLI-------HGLFLHN 202
Query: 124 ----AHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWN 170
A A+VD G +L ++V+ K + LA + +M E D V +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
T+I GL + + DD++ +F +M G++ D T +++ + + +
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESS 286
+ + + L+ + K G + A L+ + K PD+ Y+++I+G+ + ++ +
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
+F EL++S P + L I+G+C
Sbjct: 383 KHMF-ELMISKD---------CFPNVVTYSTL-----IKGFC------------------ 409
Query: 347 YSRLNEIDMARKLFDESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
+ ++ +LF E ++ + + +I G+ Q + A +F++M++ PN
Sbjct: 410 --KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
+T L + G L+ V + ++ +EP+IY +I+ K G + + +LF
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 463 SMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAG 518
++S K N + +NT+I G+ G EA L K+M G P+ T+ +++ A G
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Query: 519 LVREGEEIFHDM 530
E+ +M
Sbjct: 588 DREASAELIKEM 599
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 164/365 (44%), Gaps = 16/365 (4%)
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQ--ELGVGMGIQCLAFKFGFHRDAYVLT 240
DD++ +F DMV + +L AVA++ EL + +G Q G D Y +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL--GISHDLYTYS 122
Query: 241 GLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
++ + + +S A + + K PD++ +++++GY + I +V L +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
G + + T LI ++ V+ G + + + +ID+A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 357 ----RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
+K+ E V +N +I G + + AL+LF EM P+ T ++ +S
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 413 CAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----N 468
G S + + + + PN+ +ALID + K G + EA +L+D M ++ +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 469 TVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
T++++I G+ +H EA +F+ M+ P+ VT+ +++ A V EG E+F
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 529 DMVNK 533
+M +
Sbjct: 423 EMSQR 427
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 195/470 (41%), Gaps = 48/470 (10%)
Query: 130 GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWNTVITGLVRNCYYDDS 185
G +L+ S ++ + + S++ LA V +M E D V ++++ G + D+
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
+ + MV G + D+ T T++ + + + + + G D +V+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 246 YSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
K GDI A L + K D++ YN +I G ++ ++ LF E+ G R
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
T LI +G S S L+ + R
Sbjct: 293 VFTYSSLISCLCNYGRW------------------SDASRLLSDMIER------------ 322
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
V ++A+I + + G A L+ EM+ P+ T ++ ++ L
Sbjct: 323 -KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIF 477
K + +L+ SK+ PN+ + LI + K + E +LF MS++ NTVT+ T+I
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
G+ A +FK+M+ G+HP+ +T+ +L G + + +F + + + +E
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF-EYLQRSTME 500
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLL-GACK 583
P + M++ + +AG++E E + V P + T++ G C+
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/459 (20%), Positives = 198/459 (43%), Gaps = 29/459 (6%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
LH + +V G S L+DL F R + ++ + +
Sbjct: 8 LHRNRLVKGNSGKALSFSRLLDLSFWV---------------RAFCNYREILRNGLHSLQ 52
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
+++++ +F MV + +L +A++++ V + + G D Y
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 242 LVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSG 297
L++ + + A G + K PD++ + ++I+G+ +E ++ + +++ G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 298 QRVSSSTMVGLIPVSSPFGHLHLTCSI----QGYCVKSGAISNSSVSTALTTIYSRLNEI 353
+ +I GH++ S+ + Y ++ + +S+ L +
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 354 DMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSAC 413
+ R + + V +NA+I + + G A L+ EM+ PN T T+ ++
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 414 AQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NT 469
G + + + L+++K P++ T+LI+ + KC + +A ++F MS+K NT
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 470 VTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHD 529
+T+ T+I G+G G + A ++F M+ G+ P+ T+ +L+ + G V++ IF D
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 530 MVNKYR--IEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
M + + P + ++ L G+LEKAL M
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 174/433 (40%), Gaps = 54/433 (12%)
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWNTVITGLV 177
L H + G +L+ C+ L++ + + S+ LA +M E D V + ++I G
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAY 237
++++ + MV G++ D T++ ++ + + + + +G D
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 238 VLTGLVSLYSKCGDISTA-RLLFGMIG---KPDLIAYNAMISGYTCNGEIESSVKLFREL 293
+ T LV+ G A LL GM KPD+I +NA+I + G+ + +L+ E+
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 294 L-------------------VSGQRVSSSTMVGLIPVSSPFGHL-HLTCSIQGYC----- 328
+ + G + M L+ F + T I G+C
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 329 ----------VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVA----AWNAM 374
+ G N+ T L + ++ + ++A+++F + V +N +
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 375 ISGYTQNGLTETALSLFQEMMTTEF---TPNPVTITTTLSACAQLGSLSFGKWVHQLIKS 431
+ NG + AL +F++M E PN T L G L V + ++
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLHGYGHE 487
+ ++ I T +I K G + A LF S+ K N VT+ T+I G G HE
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
Query: 488 ALKLFKEMLHSGI 500
A LF++M G+
Sbjct: 514 AHVLFRKMKEDGV 526
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 210/475 (44%), Gaps = 26/475 (5%)
Query: 158 FDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQEL 217
F +R+ + + +GLV DD++ +FRDM+ + + A+A+ ++
Sbjct: 46 FSTFSDRNLSYRDKLSSGLV-GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY 104
Query: 218 GVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAM 273
+ + + G Y L+ +++ + +C +S A G I K PD + +N +
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
++G + +++L ++ G + + T+ L+ G + + V++G
Sbjct: 165 LNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF 224
Query: 334 ISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTV----AAWNAMISGYTQNGLTETALS 389
N + + + + +A +L + E+ + ++ +I G ++G + A +
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 390 LFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMY 448
LF EM F + +T T + G G K + +IK K + PN+ + LID +
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK-ISPNVVTFSVLIDSF 343
Query: 449 AKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSG 504
K G + EA QL M ++ NT+T+N++I G+ EA+++ M+ G P
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 505 VTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIR 564
+TF ++ A + +G E+F +M + I ++ +V ++G+LE A + +
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT-LVQGFCQSGKLEVAKKLFQ 462
Query: 565 TM---PVEPGPAVWGTLL-GAC---KIHKNTDIARVASERLFELDPGSVGYYVLL 612
M V P + LL G C ++ K +I + ELD +G Y+++
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD---IGIYMII 514
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 182/463 (39%), Gaps = 57/463 (12%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHL----RLRTNLAPDNYTYAFTIAASPDDKYGM 120
PD +FN L+ G + S ++ L + T + + + D +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD--AV 213
Query: 121 LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGL 176
+L + GF N ++++ K + LA ++ +M ER D V ++ +I GL
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
++ D++ +F +M G + D T T++ G + K +
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 237 YVLTGLVSLYSKCGDISTA-RLLFGMIGK---PDLIAYNAMISGYTCNGEIESSVKLFRE 292
+ L+ + K G + A +LL M+ + P+ I YN++I G+ +E ++++ +
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV-D 392
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
L++S G P F L I GYC + N
Sbjct: 393 LMISK---------GCDPDIMTFNIL-----INGYC--------------------KANR 418
Query: 353 IDMARKLFDESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITT 408
ID +LF E + V A +N ++ G+ Q+G E A LFQEM++ P+ V+
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 409 TLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK- 467
L G L + I+ +E +I + +I + +A LF S+ K
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 468 ---NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
+ +N +I +A LF++M G P +T+
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/407 (19%), Positives = 170/407 (41%), Gaps = 24/407 (5%)
Query: 26 QLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRNPDIFL----FNVLVKGFSVNA 81
+++ G+Q + + + + G T A L + +I L +++++ G +
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTY-----AFTIAASPDDKYGMLLHAHAIVDGFGSNLF 136
S ++ L+ + ++ D TY F A DD G L I N+
Sbjct: 278 SLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDD--GAKLLRDMIKRKISPNVV 334
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDM 192
S L+D + K ++ A ++ EM +R +T+ +N++I G + +++IQ+ M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
++ G D T ++ + + G+ + G + LV + + G +
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 253 STARLLFG-MIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMV-- 306
A+ LF M+ + PD+++Y ++ G NGE+E ++++F ++ S + +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 307 --GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
G+ S L CS+ VK A + + + + L S + RK+ +E
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 365 EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
+N +I + + TA L +EM ++ F + T+ ++
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 109/258 (42%), Gaps = 41/258 (15%)
Query: 64 NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLH 123
+PDI FN+L+ G+ + L+ + LR +A + TY
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA-NTVTY----------------- 441
Query: 124 AHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRN 179
+ +V GF C S ++ +A+K+F EM R D V++ ++ GL N
Sbjct: 442 -NTLVQGF------CQS--------GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 180 CYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVL 239
+ ++++F + + +++D + ++ + ++ + C G DA
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 240 TGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
++S + +S A +LF + + PD + YN +I + + + ++ +L E+
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606
Query: 296 SGQRVSSSTMVGLIPVSS 313
SG ST+ +I + S
Sbjct: 607 SGFPADVSTVKMVINMLS 624
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/528 (20%), Positives = 212/528 (40%), Gaps = 68/528 (12%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
N ++ + + + + ++ +I +G + + + F G ++ ++
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 65 PDI----FLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTY-----AFTIAASPD 115
+I +N+L+ GFS N + + +R R+ A Y++ + D
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR-RSGFAVTPYSFNPLIEGYCKQGLFD 325
Query: 116 DKYGM---LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTV 172
D +G+ +L+A N+++C+ L D F R+ AR++ M D V++NT+
Sbjct: 326 DAWGVTDEMLNAGIYPTTSTYNIYICA-LCD----FGRIDDARELLSSMAAPDVVSYNTL 380
Query: 173 ITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF 232
+ G ++ + ++ +F D+ A + T T++ + E
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE------------------- 421
Query: 233 HRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRE 292
+G + + + T +L+F PD+I Y ++ G+ NG + + +++ E
Sbjct: 422 -------SGNLEGAQRLKEEMTTQLIF-----PDVITYTTLVKGFVKNGNLSMATEVYDE 469
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLN- 351
+L G + G + G L L S + + + ++ + LT R++
Sbjct: 470 MLRKGIKPD-----GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDG 524
Query: 352 ---------EIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
I+ RK+F + +I GY +NG + A +L+ EM+ P+
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
+T + A+ G L +K + + PN+ AL+ K GNI EA +
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 463 SMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVT 506
M E+ N ++ +I E +KL+KEML I P G T
Sbjct: 645 KMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/503 (20%), Positives = 204/503 (40%), Gaps = 46/503 (9%)
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERD----TVAWNTVITGLVRNCYY 182
I G + ++++D FK + K++ EM R+ V +N +I G +N
Sbjct: 230 IEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKM 289
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
+++ + DM +G V + ++ + G+ G +
Sbjct: 290 EEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIY 349
Query: 243 VSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSS 302
+ G I AR L + PD+++YN ++ GY G+ + LF +L S
Sbjct: 350 ICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI 409
Query: 303 STMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE 362
T LI G C +SG + + RL E + +F +
Sbjct: 410 VTYNTLI---------------DGLC-ESGNLEGAQ----------RLKEEMTTQLIFPD 443
Query: 363 SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG 422
V + ++ G+ +NG A ++ EM+ P+ TT +LG
Sbjct: 444 -----VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKA 498
Query: 423 KWVHQ-LIKSKNLEPNIYVSTALIDMYAKCGNISEA----RQLFDSMSEKNTVTWNTIIF 477
+H+ ++ + + P++ + ID K GN+ +A R++F + VT+ T+I
Sbjct: 499 FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR 558
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
GY +G A L+ EML ++PS +T+ ++Y + AG + + + +M K +
Sbjct: 559 GYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM-KKRGVR 617
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTMPVE---PGPAVWGTLLGA-CKIHKNTDIARV 593
P H ++ + +AG +++A ++ M E P + L+ C K ++ ++
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKL 677
Query: 594 ASERL-FELDPGSVGYYVLLSNI 615
E L E++P + L ++
Sbjct: 678 YKEMLDKEIEPDGYTHRALFKHL 700
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 109/259 (42%), Gaps = 9/259 (3%)
Query: 378 YTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPN 437
YT+ + E L F++M+ F P+ L ++ V++ + + P
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 438 IYVSTALIDMYAKCGNISEARQLFDSMSEKN----TVTWNTIIFGYGLHGYGHEALKLFK 493
+ ++D K G++ +++ M +N VT+N +I G+ +G EA +
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 494 EMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRA 553
+M SG + +F ++ GL + + +M+N I P + + L
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA-GIYPTTSTYNIYICALCDF 356
Query: 554 GQLEKALEFIRTMPVEPGPAVWGTLL-GACKIHKNTDIARVASE-RLFELDPGSVGYYVL 611
G+++ A E + +M P + TL+ G K+ K + + + + R ++ P V Y L
Sbjct: 357 GRIDDARELLSSMAA-PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 612 LSNIYSVGRNFPKAASIRE 630
+ + G N A ++E
Sbjct: 416 IDGLCESG-NLEGAQRLKE 433
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 207/496 (41%), Gaps = 71/496 (14%)
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGV----GMGIQCLAFKFGFHRDAYV 238
DD+I +F MV + +L A+A++++ V G +Q L G Y
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL----YT 122
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELL 294
L++ + + IS A L G + K P ++ +++++GY I +V L +++
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
G R + T LI ++ V+ G N + + + D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 355 MARKLFDESP----EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
+A L ++ E V +N +I + + AL+LF+EM T PN VT ++ +
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 411 SACAQLGSLSFGKW--VHQLIKS---KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
S S+G+W QL+ K + PN+ ALID + K G EA +L+D M
Sbjct: 303 SCLC-----SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 466 EK---------------------------------------NTVTWNTIIFGYGLHGYGH 486
++ + VT+NT+I G+
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 487 EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACM 546
+ +LF+EM H G+ VT+ +++ H G +++F MV+ + P ++ +
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSIL 476
Query: 547 VDILGRAGQLEKALE---FIRTMPVEPGPAVWGTLL-GACKIHKNTDIARV-ASERLFEL 601
+D L G+LEKALE +++ ++ ++ T++ G CK K D + S L +
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 602 DPGSVGYYVLLSNIYS 617
P V Y ++S + S
Sbjct: 537 KPNVVTYNTMISGLCS 552
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 201/488 (41%), Gaps = 61/488 (12%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLH- 123
P I + L+ G+ S ++AL + + PD T+ I +G+ LH
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLI-------HGLFLHN 204
Query: 124 ----AHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWN 170
A A+VD G NL +V+ K LA + ++M E D V +N
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
T+I L + + DD++ +F++M G++ + T +++ + + +
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFG-MIGK---PDLIAYNAMISGYTCNGEIESS 286
+ + L+ + K G A L+ MI + PD+ YN++++G+ + ++ +
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
++F E +VS P + L I+G+C KS + + +
Sbjct: 385 KQMF-EFMVSKD---------CFPDVVTYNTL-----IKGFC-KSKRVEDGT-------- 420
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
++ R++ + +I G +G + A +F++M++ P+ +T
Sbjct: 421 -------ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 407 TTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE 466
+ L G L V ++ ++ +IY+ T +I+ K G + + LF S+S
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 467 K----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVRE 522
K N VT+NT+I G EA L K+M G P+ T+ +++ A G
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 523 GEEIFHDM 530
E+ +M
Sbjct: 594 SAELIREM 601
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 45/301 (14%)
Query: 21 AQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR----NPDIFLFNVLVKG 76
+Q+ + +I +L + L G A L+ + +PDIF +N LV G
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 77 FSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGSNLF 136
F ++ + ++ + + + PD TY + ++ GF
Sbjct: 375 FCMHDRLDKAKQMFEFM-VSKDCFPDVVTY------------------NTLIKGF----- 410
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDM 192
C S RV ++F EM R DTV + T+I GL + D++ +VF+ M
Sbjct: 411 -CKS--------KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
V++GV D T +L + +L + + K D Y+ T ++ K G +
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 253 STARLLFGMIG----KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGL 308
LF + KP+++ YN MISG ++ + L +++ G +S T L
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Query: 309 I 309
I
Sbjct: 582 I 582
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 206/473 (43%), Gaps = 54/473 (11%)
Query: 130 GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWNTVITGLVRNCYYDDS 185
G NL+ + L++ + + S++ LA + +M E V ++++ G D+
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
+ + MV G + D+ T T++ + H A LV
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLF-------------------LHNKASEAVALVDR 215
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM 305
+ G +P+L+ Y +++G G+I+ + L ++ + +
Sbjct: 216 MVQRG------------CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 306 VGLIPVSSPFGH----LHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
+I + H L+L ++ V+ I+ SS+ + L Y R + D +R L D
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN-YERWS--DASRLLSD 320
Query: 362 ESPEK---TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
K V +NA+I + + G A L+ EM+ P+ T ++ ++
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNT 474
L K + +L+ SK+ PN+ LI+ + K I E +LF MS++ NTVT+ T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 475 IIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKY 534
+I G+ A +FK+M+ G+HP+ +T+ ++L G + + +F + + +
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRS 499
Query: 535 RIEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLL-GACK 583
++EP + M++ + +AG++E + ++ V+P ++ T++ G C+
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 192/468 (41%), Gaps = 69/468 (14%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLH- 123
P I + L+ G+ S ++AL + + PD T+ I +G+ LH
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLI-------HGLFLHN 204
Query: 124 ----AHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWN 170
A A+VD G NL +V+ K + LA + ++M E + V ++
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
TVI L + + DD++ +F +M GV+ + T +++ + + + +
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESS 286
+ + L+ + K G + A L+ + K PD+ Y+++I+G+ + ++ +
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
+F EL++S P + L I G+C
Sbjct: 385 KHMF-ELMISKD---------CFPNVVTYNTL-----INGFC------------------ 411
Query: 347 YSRLNEIDMARKLFDESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
+ ID +LF E ++ + + +I G+ Q + A +F++M++ PN
Sbjct: 412 --KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
+T T L + G L V + ++ +EP IY +I+ K G + + LF
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 463 SMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVT 506
S+S K + + +NT+I G+ G EA LF++M G P T
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 18/255 (7%)
Query: 64 NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA-SPDDKYGMLL 122
NP++ FN L+ F + LY + ++ ++ PD +TY+ I D+
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 123 HAHAIV---DGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITG 175
H ++ D F N+ ++L++ + K R+ ++F EM +R +TV + T+I G
Sbjct: 386 HMFELMISKDCF-PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 176 L--VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH 233
R+C D++ VF+ MV++GV + T T+L + + +L M + +
Sbjct: 445 FFQARDC--DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 234 RDAYVLTGLVSLYSKCGDISTARLLFGMIG----KPDLIAYNAMISGYTCNGEIESSVKL 289
Y ++ K G + LF + KPD+I YN MISG+ G E + L
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 290 FRELLVSGQRVSSST 304
FR++ G S T
Sbjct: 563 FRKMREDGPLPDSGT 577
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 18/270 (6%)
Query: 364 PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGK 423
P ++ +N ++S + + +SL ++M + N T ++ + +S
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 424 WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE----KNTVTWNTIIFGY 479
+ + EP+I ++L++ Y IS+A L D M E +T+T+ T+I G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 480 GLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGE-EIFHDMVNKY---R 535
LH EA+ L M+ G P+ VT Y GL + G+ ++ +++NK +
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVT-----YGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 536 IEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLLGA-CKIHKNTDIA 591
IE ++ ++D L + + AL M V P + +L+ C + +D +
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 592 RVASERL-FELDPGSVGYYVLLSNIYSVGR 620
R+ S+ + +++P V + L+ G+
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGK 345
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 142/629 (22%), Positives = 270/629 (42%), Gaps = 95/629 (15%)
Query: 1 MIQRNSIITFINKACNLPHLAQIHAQL--ILNGYQSDLASITKLTQKLFDFGATRHARAL 58
+++ S ++ I+KA ++ HLAQ H + +L+ Y + L + + +++ F A + +
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS-YNAVLDATIR-SKRNISF-AENVFKEM 196
Query: 59 FFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA-----S 113
S +P++F +N+L++GF + ++ L+ + + L P+ TY I
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL-PNVVTYNTLIDGYCKLRK 255
Query: 114 PDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAW 169
DD + LL + A+ G NL + +++ + R+ V EM R D V +
Sbjct: 256 IDDGFK-LLRSMAL-KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 170 NTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFK 229
NT+I G + + ++ + +M+ +G+ T +++ ++ + + M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 230 FGFHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIGK---PDLIAYNAMISGYTCNGEIES 285
G + T LV +S+ G ++ A R+L M P ++ YNA+I+G+ G++E
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 286 SVKLFRELLVSG---QRVSSSTMV----------------------GLIPVSSPFGHLHL 320
++ + ++ G VS ST++ G+ P + + L
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL-- 491
Query: 321 TCSIQGYC---------------VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPE 365
IQG+C ++ G + TAL Y +++ A +L +E E
Sbjct: 492 ---IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 366 K----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
K V ++ +I+G + T A L ++ E P+ VT T + C+
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS------- 601
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKN----TVTWNTIIF 477
N+E VS LI + G ++EA Q+F+SM KN +N +I
Sbjct: 602 -----------NIEFKSVVS--LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIE 537
G+ G +A L+KEM+ SG VT ++++ A G V E + ++ +
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS 708
Query: 538 PLAEHHACMVDILGRAGQLEKALEFIRTM 566
AE +V+I R G ++ L+ + M
Sbjct: 709 E-AEQAKVLVEINHREGNMDVVLDVLAEM 736
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 148/327 (45%), Gaps = 22/327 (6%)
Query: 300 VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKL 359
V S + + LI + HL Q + G +S ++V A TI S+ N I A +
Sbjct: 141 VKSYSRLSLIDKALSIVHL-----AQAHGFMPGVLSYNAVLDA--TIRSKRN-ISFAENV 192
Query: 360 FDESPEKTVA----AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQ 415
F E E V+ +N +I G+ G + AL+LF +M T PN VT T + +
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 416 LGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVT 471
L + G + + + K LEPN+ +I+ + G + E + M+ + + VT
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 472 WNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMV 531
+NT+I GY G H+AL + EML G+ PS +T+ S++++ AG + E F D +
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQM 371
Query: 532 NKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLL-GACKIHKN 587
+ P + +VD + G + +A +R M P + L+ G C K
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 588 TD-IARVASERLFELDPGSVGYYVLLS 613
D IA + + L P V Y +LS
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/469 (19%), Positives = 195/469 (41%), Gaps = 48/469 (10%)
Query: 130 GFGSNLFVCSSLVDLYFKFSR-VGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDD 184
GF + ++++D + R + A VF EM E + +N +I G D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVS 244
++ +F M G + T T++ +L+++ G F R + L GL
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG---------FKLLR-SMALKGL-- 271
Query: 245 LYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSST 304
+P+LI+YN +I+G G ++ + E+ G + T
Sbjct: 272 -------------------EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 305 MVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
LI G+ H + ++ G + T+L + ++ A + D+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 365 EKTVA----AWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLS 420
+ + + ++ G++Q G A + +EM F+P+ VT ++ G +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 421 FGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTII 476
V + +K K L P++ + ++ + + ++ EA ++ M EK +T+T++++I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 477 FGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRI 536
G+ EA L++EML G+ P T+ +++ A G + + ++ ++MV K +
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK-GV 551
Query: 537 EPLAEHHACMVDILGRAGQLEKALEFIRTMPVE---PGPAVWGTLLGAC 582
P ++ +++ L + + +A + + E P + TL+ C
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG-SLSFGKWV 425
T + ++ ++ Y++ L + ALS+ F P ++ L A + ++SF + V
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGL 481
+ + + PN++ LI + GNI A LFD M K N VT+NT+I GY
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREG 523
+ KL + M G+ P+ +++ ++ GL REG
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVI-----NGLCREG 289
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 217/516 (42%), Gaps = 25/516 (4%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGML--- 121
P++ F L+ GF + L+ + R + PD Y+ I K GML
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAYSTLIDGYF--KAGMLGMG 340
Query: 122 --LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEM----PERDTVAWNTVITG 175
L + A+ G ++ V SS +D+Y K + A V+ M + V + +I G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
L ++ ++ ++ ++ G++ T +++ + L G + K G+ D
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 236 AYVLTGLVSLYSKCGDISTA-RLLFGMIGKP---DLIAYNAMISGYTCNGEIESSVKLFR 291
+ LV SK G + A R M+G+ +++ +N++I G+ + ++K+FR
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 292 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLN 351
+ + G + +T ++ VS G L + K G ++ L + +
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Query: 352 EIDMARKLFDESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTIT 407
+ + +LFD ++A N +I + E A F ++ + P+ VT
Sbjct: 581 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 640
Query: 408 TTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK 467
T + L L + + +L+K PN T LI + K ++ A ++F M+EK
Sbjct: 641 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 700
Query: 468 ----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREG 523
N VT+ ++ + + KLF+EM GI PS V++ I+ G V E
Sbjct: 701 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Query: 524 EEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
IFH ++ ++ P +A ++ + G+L +A
Sbjct: 761 TNIFHQAIDA-KLLPDVVAYAILIRGYCKVGRLVEA 795
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 205/491 (41%), Gaps = 38/491 (7%)
Query: 157 VFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQE 216
V D P + V + T+I G + D + +F+ M G++ D T++ +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 217 LGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIG----KPDLIAYNA 272
LG+G + A G D V + + +Y K GD++TA +++ + P+++ Y
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 273 MISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSG 332
+I G +G I + ++ ++L G S T LI G+L ++ +K G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 333 AISNSSVSTALTTIYSR----LNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
+ + L S+ L+ + + K+ +S V +N++I G+ + + AL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMY 448
+F+ M P+ T TT + G L ++ + LEP+ LID +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 449 AKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYG-----HEALKLFKEMLHSGIHPS 503
K + QLFD M ++N ++ + + +H +A K F ++ + P
Sbjct: 577 CKHMKPTIGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 504 GVTFLSILYACSHAGLVR--EGEEIFHDMVNKYRIEPLAEHHA---CMVDILGRAGQLEK 558
VT+ +++ C + L R E E IF + ++ P + ++ +L + ++
Sbjct: 636 IVTYNTMI--CGYCSLRRLDEAERIFELL----KVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 559 ALEFIRTMP---VEPGPAVWGTLLGACKIHKNTDIARVASERLFE------LDPGSVGYY 609
A+ M +P +G L+ K+ DI S +LFE + P V Y
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDW--FSKSVDIE--GSFKLFEEMQEKGISPSIVSYS 745
Query: 610 VLLSNIYSVGR 620
+++ + GR
Sbjct: 746 IIIDGLCKRGR 756
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 160/381 (41%), Gaps = 51/381 (13%)
Query: 256 RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKL--------FRELLVSGQRVSSSTMVG 307
+L G I + A+ ++ C GE+ ++ FR +VS +V V
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD 265
Query: 308 LIPVSSPFGHLHLTCS-----------IQGYCVKS---------------GAISNSSVST 341
I V+S L L C I G+C + G + +
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 342 ALTTIYSRLNEIDMARKLFDESPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTT 397
L Y + + M KLF ++ K V +++ I Y ++G TA +++ M+
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 398 EFTPNPVTITTTLSACAQLGSL--SFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNIS 455
+PN VT T + Q G + +FG + Q++K + +EP+I ++LID + KCGN+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMY-GQILK-RGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 456 EARQLFDSMSE----KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSIL 511
L++ M + + V + ++ G G A++ +ML I + V F S++
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 512 YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL-EFIR--TMPV 568
E ++F ++ Y I+P ++ + G+LE+AL F R M +
Sbjct: 504 DGWCRLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 569 EPGPAVWGTLLGA-CKIHKNT 588
EP + TL+ A CK K T
Sbjct: 563 EPDALAYCTLIDAFCKHMKPT 583
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 177/399 (44%), Gaps = 16/399 (4%)
Query: 127 IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSI 186
++ GF + L++ K RV A+ +F +P+ + V +NT+I G V + DD+
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 187 QVFRDMVAN-GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
V DMV + G+ D T +++ + +G+ + + G + Y T LV
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 246 YSKCGDISTARLLFGMIG----KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
+ K G I A + + KP+ + +N +IS + I +V++FRE+ G +
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
T LI + + + G ++N+ L + R EI ARKL +
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 362 E-----SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQL 416
E SP + +N++I G + G + A SLF++M+ P+ ++ ++ +
Sbjct: 554 EMVFQGSPLDEIT-YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612
Query: 417 GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTW 472
G + + + + P+I +LI+ + G I + +F + + +TVT+
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSIL 511
NT++ G+ ++A L E + G P+ T+ SIL
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW-SIL 710
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 186/428 (43%), Gaps = 50/428 (11%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
N +I + K + A++ ++++ G+ D + L L G A+ LF+ +
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHA 124
P+I +FN L+ GF + + A+ + + + PD TY I K G++ A
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW--KEGLVGLA 408
Query: 125 HAIV-----DGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWNTVITG 175
++ G N++ + LVD + K ++ A V +EM + +TV +N +I+
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
+ +++++FR+M G + D T +++ + E+ E+ + + G +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 236 AYVLTGLVSLYSKCGDISTARLLFGMI---GKP-DLIAYNAMISGYTCNGEIESSVKLFR 291
L++ + + G+I AR L + G P D I YN++I G GE++ + LF
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 292 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCS--IQGYCVKSGAISNSSVSTALTTIYSR 349
++L G S +++C+ I G C +SG + +
Sbjct: 589 KMLRDGHAPS-----------------NISCNILINGLC-RSGMVEEA------------ 618
Query: 350 LNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTT 409
++ +++ + +N++I+G + G E L++F+++ P+ VT T
Sbjct: 619 ---VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 410 LSACAQLG 417
+S + G
Sbjct: 676 MSWLCKGG 683
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 189/435 (43%), Gaps = 43/435 (9%)
Query: 165 DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQ 224
++V + T+I L + ++++Q+ +M G D+ T V+ + + + +
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 225 CLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIE 284
GF D L++ K G + A+ LF I KP+++ +N +I G+ +G ++
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 285 SSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALT 344
+ + +++ S G++P + L I GY K G V AL
Sbjct: 371 DAKAVLSDMVTS---------YGIVPDVCTYNSL-----IYGYW-KEGL-----VGLALE 410
Query: 345 TIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPV 404
++ DM K + V ++ ++ G+ + G + A ++ EM PN V
Sbjct: 411 VLH------DMRNK----GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 405 TITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF-DS 463
+SA + + + + + K +P++Y +LI + I A L D
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 464 MSE---KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLV 520
+SE NTVT+NT+I + G EA KL EM+ G +T+ S++ AG V
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 521 REGEEIFHDMVNKYRIEPLAEHHAC--MVDILGRAGQLEKALEFIRTMPVE---PGPAVW 575
+ +F M+ R + +C +++ L R+G +E+A+EF + M + P +
Sbjct: 581 DKARSLFEKML---RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 576 GTLL-GACKIHKNTD 589
+L+ G C+ + D
Sbjct: 638 NSLINGLCRAGRIED 652
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 178/427 (41%), Gaps = 48/427 (11%)
Query: 168 AWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLA 227
++N V+ LV + + VF DM++ + T V+ A + E+ + +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 228 FKFGFHRDAYVLTGLVSLYSKCGDISTARLL----FGMIGKPDLIAYNAMISGYTCNGEI 283
K G ++ + L+ SKC ++ A L F M PD +N +I G I
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 284 ESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSS----- 338
+ K+ +L+ G P +G+L + G C K G + +
Sbjct: 304 NEAAKMVNRMLIRG----------FAPDDITYGYL-----MNGLC-KIGRVDAAKDLFYR 347
Query: 339 VSTALTTIYSRL-------NEIDMARKLFDES-------PEKTVAAWNAMISGYTQNGLT 384
+ I++ L +D A+ + + P+ V +N++I GY + GL
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD--VCTYNSLIYGYWKEGLV 405
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTAL 444
AL + +M PN + T + +LG + V + + L+PN L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 445 IDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGI 500
I + K I EA ++F M K + T+N++I G AL L ++M+ G+
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 501 HPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAE-HHACMVDILGRAGQLEKA 559
+ VT+ +++ A G ++E ++ ++MV ++ PL E + ++ L RAG+++KA
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMV--FQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 560 LEFIRTM 566
M
Sbjct: 584 RSLFEKM 590
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 200/468 (42%), Gaps = 63/468 (13%)
Query: 207 VLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK-- 264
+L A+A++++ + + + + G + Y L++ + + IS A L G + K
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 265 --PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC 322
P ++ +++++GY I +V L +++ G R + T LI
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 323 SIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP----EKTVAAWNAMISGY 378
++ V+ G N + + +ID+A L ++ E V +N +I
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 379 TQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKW--VHQLIKS---KN 433
+ + AL+LF+EM T PN VT ++ +S S+G+W QL+ K
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC-----SYGRWSDASQLLSDMIEKK 250
Query: 434 LEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLHGYGHEA- 488
+ PN+ ALID + K G EA +L D M ++ + T+N++I G+ +H +A
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 489 ----------------------------------LKLFKEMLHSGIHPSGVTFLSILYAC 514
+LF+EM H G+ VT+ +++
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 515 SHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALE---FIRTMPVEPG 571
H G +++F MV+ + P ++ ++D L G+LEKALE +++ ++
Sbjct: 371 FHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 572 PAVWGTLL-GACKIHKNTDIARV-ASERLFELDPGSVGYYVLLSNIYS 617
++ T++ G CK K D + S L + P V Y ++S + S
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 201/488 (41%), Gaps = 61/488 (12%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLH- 123
P I + L+ G+ S ++AL + + PD T+ I +G+ LH
Sbjct: 78 PSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLI-------HGLFLHN 129
Query: 124 ----AHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWN 170
A A+VD G NL +V+ K + LA + ++M E D V +N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
T+I L + + DD++ +F++M G++ + T +++ + + +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 231 GFHRDAYVLTGLVSLYSKCGD-ISTARLLFGMIGK---PDLIAYNAMISGYTCNGEIESS 286
+ + L+ + K G + +L MI + PD+ YN++I+G+ + ++ +
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
++F E +VS P + L I+G+C KS + + +
Sbjct: 310 KQMF-EFMVSKD---------CFPDLDTYNTL-----IKGFC-KSKRVEDGT-------- 345
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
++ R++ + +I G +G + A +F++M++ P+ +T
Sbjct: 346 -------ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 407 TTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE 466
+ L G L V ++ ++ +IY+ T +I+ K G + + LF S+S
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 467 K----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVRE 522
K N VT+NT+I G EA L K+M G P T+ +++ A G
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 523 GEEIFHDM 530
E+ +M
Sbjct: 519 SAELIREM 526
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 64 NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLH 123
+PDIF +N L+ GF ++ + ++ + + + PD TY
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFM-VSKDCFPDLDTY----------------- 328
Query: 124 AHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRN 179
+ ++ GF C S RV ++F EM R DTV + T+I GL +
Sbjct: 329 -NTLIKGF------CKS--------KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 180 CYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVL 239
D++ +VF+ MV++GV D T +L + +L + + K D Y+
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 240 TGLVSLYSKCGDISTARLLFGMIG----KPDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
T ++ K G + LF + KP+++ YN MISG ++ + L +++
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 296 SGQRVSSSTMVGLI 309
G S T LI
Sbjct: 494 DGPLPDSGTYNTLI 507
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 127/287 (44%), Gaps = 19/287 (6%)
Query: 364 PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGK 423
P ++ +N ++S + + +SL ++M + N T ++ + +S
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 424 WVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE----KNTVTWNTIIFGY 479
+ + EP+I ++L++ Y IS+A L D M E +T+T+ T+I G
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 480 GLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGE-EIFHDMVNKY---R 535
LH EA+ L M+ G P+ VT Y GL + G+ ++ +++NK +
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVT-----YGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 536 IEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLLGA-CKIHKNTDIA 591
IE ++D L + ++ AL + M + P + +L+ C + +D +
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 592 RVASERL-FELDPGSVGYYVLLSNIYSVGRNFPKAASIREVAKKRKL 637
++ S+ + +++P V + L+ G+ F +A + + KR +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGK-FVEAEKLHDDMIKRSI 286
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 184/470 (39%), Gaps = 70/470 (14%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHA 124
P I N L+ GF S ++AL + + PD T+ + +G+ H
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQM-VEMGYQPDTVTFTTLV-------HGLFQHN 194
Query: 125 HA----------IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWN 170
A +V G +L ++++ K LA + ++M E D V +N
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
T+I GL + + DD+ +F M G++ D T ++ + + +
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK-----PDLIAYNAMISGYTCNGEIES 285
+ D L+ + K G + A L+ + K PD++AYN +I G+ +E
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 286 SVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTT 345
+++FRE+ QR G + N+ T L
Sbjct: 375 GMEVFREM---SQR--------------------------------GLVGNTVTYTTLIH 399
Query: 346 IYSRLNEIDMARKLFDE----SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTP 401
+ + + D A+ +F + + +N ++ G NG ETAL +F+ M +
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 402 NPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLF 461
+ VT TT + A + G + G + + K ++PN+ T ++ + + G EA LF
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 462 DSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
M E N+ T+NT+I G + +L KEM G TF
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/517 (19%), Positives = 186/517 (35%), Gaps = 100/517 (19%)
Query: 164 RDTVAWNTVITG-------------LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPA 210
R T+ W G ++++ DD+I +F DMV + +L A
Sbjct: 25 RTTLCWERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSA 84
Query: 211 VAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PD 266
+A++ + + + + G + Y + ++ + + +S A + G + K P
Sbjct: 85 IAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPS 144
Query: 267 LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQG 326
++ N++++G+ I +V L +++ G + + T L+ ++
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 327 YCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP----EKTVAAWNAMISGYTQNG 382
V G + A+ + E D+A L ++ E V +N +I G +
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 383 LTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVST 442
+ A LF +M T P+ T +S G S + + KN+ P++
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 443 ALIDMYAKCGNISEARQLFDSMSEK----------------------------------- 467
ALID + K G + EA +L+D M +
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 468 -----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSG------------------ 504
NTVT+ T+I G+ A +FK+M+ G+HP
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 505 -----------------VTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMV 547
VT+ +++ A AG V +G ++F + K ++P + M+
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMM 503
Query: 548 DILGRAGQLEKALEFIRTMPVE---PGPAVWGTLLGA 581
R G E+A M + P + TL+ A
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 171/458 (37%), Gaps = 91/458 (19%)
Query: 6 SIITF---INKACNLPHLAQIHA---QLILNGYQSDLASITKLTQKLFDFGATRHARALF 59
SI+T +N C+ +++ A Q++ GYQ D + T L LF A AL
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 60 FSVR----NPDIFLFNVLVKGFSVNASPSSSIAL-------------------------Y 90
+ PD+ + ++ G P ++ L Y
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 91 THL--------RLRTN-LAPDNYTYAFTIAASPDDKYGMLLHAHAIVD-----GFGSNLF 136
H+ ++ T + PD +TY I+ + YG A ++ +L
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN--YGRWSDASRLLSDMLEKNINPDLV 321
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPER-----DTVAWNTVITGLVRNCYYDDSIQVFRD 191
++L+D + K ++ A K++DEM + D VA+NT+I G + ++ ++VFR+
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 192 MVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGD 251
M G+ ++ T T++ + ++ + G H D L+ G+
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 252 ISTARLLFGMIGKPDL----IAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVG 307
+ TA ++F + K D+ + Y MI G++E LF L + G + + T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT--- 498
Query: 308 LIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKT 367
T + G+C K + ++ + E + P
Sbjct: 499 ------------YTTMMSGFCRK-------GLKEEADALFVEMKE---------DGPLPN 530
Query: 368 VAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
+N +I ++G + L +EM + F + T
Sbjct: 531 SGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 145/346 (41%), Gaps = 16/346 (4%)
Query: 317 HLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPE----KTVAAWN 372
L L +I G +K G + +L + N I A L D+ E +
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 373 AMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSK 432
++ G Q+ A++L + M+ P+ VT ++ + G + ++
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 433 NLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGLHGYGHEA 488
+E ++ + +ID K ++ +A LF+ M K + T+N +I +G +A
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 489 LKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVD 548
+L +ML I+P V F +++ A G + E E+++ +MV P + ++
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 549 ILGRAGQLEKALEFIRTMP---VEPGPAVWGTLLGACKIHKNTDIARVASERLFE--LDP 603
+ ++E+ +E R M + + TL+ ++ D A++ +++ + P
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 604 GSVGYYVLLSNIYSVGRNFPKAASIREVAKKR--KLAKTPGCTLIE 647
+ Y +LL + + G N A + E +KR KL T+IE
Sbjct: 425 DIMTYNILLDGLCNNG-NVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 53/284 (18%)
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS----LSFGKWVHQLIKSKNL------ 434
+ A+ LF +M+ + P+ V + LSA A++ +S G+ + L S NL
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 435 -------------------------EPNIYVSTALIDMYAKCGNISEARQLFDSMSE--- 466
P+I +L++ + ISEA L D M E
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 467 -KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGE- 524
+TVT+ T++ G H EA+ L + M+ G P VT+ +++ GL + GE
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI-----NGLCKRGEP 231
Query: 525 EIFHDMVNKY---RIEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTL 578
++ +++NK +IE + ++D L + ++ A + M ++P + L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 579 LGA-CKIHKNTDIARVASERLFE-LDPGSVGYYVLLSNIYSVGR 620
+ C + +D +R+ S+ L + ++P V + L+ G+
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 218/495 (44%), Gaps = 44/495 (8%)
Query: 113 SPDDK-YGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNT 171
SPD K Y +LL HA + L + Y K +VGL P DTV
Sbjct: 372 SPDTKTYNILLSLHADAGDIEAAL-------EYYRKIRKVGL-------FP--DTVTHRA 415
Query: 172 VITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFG 231
V+ L + + V +M N +++D +V P + ++ + G+ +Q A
Sbjct: 416 VLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSV----PVIMQMY-VNEGLVVQAKALFER 470
Query: 232 FHRDAYV----LTGLVSLYSKCGDISTARLLF----GMIG-KPDLIAYNAMISGYTCNGE 282
F D + L ++ +Y++ G A +F M G + D++ YN MI Y
Sbjct: 471 FQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKL 530
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA 342
E ++ LF+ + G T L + + + I + SG A
Sbjct: 531 HEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAA 590
Query: 343 LTTIYSRLNEIDMARKLFDESPEKT-----VAAWNAMISGYTQNGLTETALSLFQEMMTT 397
+ Y RL + A L+ E+ EKT + ++I+G+ ++G+ E A+ F+ M
Sbjct: 591 MIASYVRLGLLSDAVDLY-EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Query: 398 EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
N + +T+ + A +++G L + V+ +K P++ S +++ + A G +SEA
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709
Query: 458 RQLFDSMSEKNT---VTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYAC 514
+F+++ EK T +++ T+++ Y G EA+++ +EM SG+ +F ++
Sbjct: 710 ESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACY 769
Query: 515 SHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPG--- 571
+ G + E E+FH+M+ + ++ + +L + G +A+ ++T E
Sbjct: 770 AADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLA 829
Query: 572 -PAVWGTLLGACKIH 585
PA+ TL A ++
Sbjct: 830 TPAITATLFSAMGLY 844
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 185/445 (41%), Gaps = 20/445 (4%)
Query: 139 SSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDMVA 194
++L+DLY K R+ A +F EM + DTV +NT+I + + ++ + + M
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 195 NGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDIST 254
G+ D+ T +L A+ ++ + K G D ++ + + ++
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 255 ARLLFGMIGKP----DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
+ + + D + ++ Y G + + LF + +SS+T+ +I
Sbjct: 429 VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCV-LSSTTLAAVID 487
Query: 311 VSSPFG-HLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF----DESPE 365
V + G + G SG ++ + Y + + A LF ++
Sbjct: 488 VYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTW 547
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
+N++ L + A + EM+ + P T +++ +LG LS +
Sbjct: 548 PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDL 607
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE----KNTVTWNTIIFGYGL 481
++ ++ ++PN V +LI+ +A+ G + EA Q F M E N + ++I Y
Sbjct: 608 YEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSK 667
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAE 541
G EA +++ +M S P S+L C+ G+V E E IF+ + K + ++
Sbjct: 668 VGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVIS- 726
Query: 542 HHACMVDILGRAGQLEKALEFIRTM 566
A M+ + G L++A+E M
Sbjct: 727 -FATMMYLYKGMGMLDEAIEVAEEM 750
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 184/456 (40%), Gaps = 31/456 (6%)
Query: 141 LVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDMVANG 196
LVD+Y K V A M +R D V TV+ + +D + + F+ A
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGK 245
Query: 197 VQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTAR 256
V +D ++ + + + + FK G SL+ G S+ R
Sbjct: 246 VDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEK-----SLHFASGSDSSPR 300
Query: 257 LLFGMIGKPDLIA-YNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
KP L + +N +I Y G + + LF E+L SG + + T +I
Sbjct: 301 -------KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTH 353
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA----RKLFDESPEKTVAAW 371
GHL S+ + G ++ L ++++ +I+ A RK+
Sbjct: 354 GHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTH 413
Query: 372 NAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKS 431
A++ Q + ++ EM + ++ + G + K + + +
Sbjct: 414 RAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQL 473
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLF---DSMS-EKNTV-TWNTIIFGYGLHGYGH 486
+ + ++ A+ID+YA+ G EA +F +MS ++N V +N +I YG
Sbjct: 474 DCVLSSTTLA-AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHE 532
Query: 487 EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACM 546
+AL LFK M + G P T+ S+ + LV E + I +M++ +P + +A M
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDS-GCKPGCKTYAAM 591
Query: 547 VDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLL 579
+ R G L A++ M V+P V+G+L+
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 115/625 (18%), Positives = 236/625 (37%), Gaps = 93/625 (14%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR- 63
N++I KA L A + ++++ +G D + + G A +L +
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 64 ---NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTY-------------- 106
+PD +N+L+ + +++ Y +R + L PD T+
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIR-KVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 107 -AFTIAASPD------DKY------------GMLLHAHAIVDGFGSNLFVCSS----LVD 143
+ A D D++ G+++ A A+ + F + + S+ ++D
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVID 487
Query: 144 LYFKFSRVGLARKVF----DEMPER-DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
+Y + A VF + +R D + +N +I + ++ ++ +F+ M G
Sbjct: 488 VYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTW 547
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
D T ++ +A + + I G +++ Y + G +S A L
Sbjct: 548 PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDL 607
Query: 259 FGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
+ + K P+ + Y ++I+G+ +G +E +++ FR + G + + + LI S
Sbjct: 608 YEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSK 667
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK---TVAAW 371
G L + S + + S ++ ++ + L + A +F+ EK V ++
Sbjct: 668 VGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISF 727
Query: 372 NAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLS-FGKWVHQLIK 430
M+ Y G+ + A+ + +EM + + + ++ A G LS + H+++
Sbjct: 728 ATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLV 787
Query: 431 SKNLEPNIYVSTALIDMYAKCGNISEA--------------------RQLFDSMS----- 465
+ L + L + K G SEA LF +M
Sbjct: 788 ERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYA 847
Query: 466 ------------EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYA 513
+ +N +I+ Y G ALK + M G+ P VT ++
Sbjct: 848 LESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGI 907
Query: 514 CSHAGLVREGEEIFHDMVNKYRIEP 538
AG+V EG + H + +EP
Sbjct: 908 YGKAGMV-EGVKRVHSRLTFGELEP 931
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 200/497 (40%), Gaps = 36/497 (7%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTY-----AFTIAASPDDKYG 119
PD+F +N +++GF ++ L ++ + + T+ AF A D+ G
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMK-GSGCSWSLVTWGILIDAFCKAGKMDEAMG 233
Query: 120 MLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERD----TVAWNTVITG 175
L + G ++L V +SL+ + + + +FDE+ ER + +NT+I G
Sbjct: 234 FLKEMKFM--GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGM---GIQCLAFKFGF 232
+ ++ ++F M+ GV+ + T ++ + GVG +Q L
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC-----GVGKTKEALQLLNLMIEK 346
Query: 233 HRDAYVLTGLVSLYSKCGD------ISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESS 286
+ +T + + C D + L+ +PD I YN ++ G G+++ +
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 287 VKLFRELLVSGQRVSSSTMV--GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALT 344
KL +L + LI LH I V+ + + L
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 345 TIYSRLNEIDMARKLFDESPEKTVA----AWNAMISGYTQNGLTETALSLFQEMMTTEFT 400
+ +++ A +L+ + + + + AMI G+ + G+ A L +M +E
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 401 PNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQL 460
P+ LS+ + GSL + + ++ N P++ +ID K G+I A L
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 461 FDSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSH 516
MS + T++ +I + GY EA+ F +M+ SG P S+L C
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 517 AGLVREGEEIFHDMVNK 533
G + E+ +V+K
Sbjct: 647 QGETDKLTELVKKLVDK 663
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 110/502 (21%), Positives = 197/502 (39%), Gaps = 82/502 (16%)
Query: 168 AWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLA 227
A N ++ LVR+ ++ + +R M+ ++ ++ +L ++++ G G+ L
Sbjct: 74 AGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALM 133
Query: 228 FKFGFHRDAY----VLTGLVSLYSKCGD-ISTARLLFGMIGKPDLIAYNAMISGYTCNGE 282
K GF + Y +L GL +CG +S R + PD+ +YN +I G+ E
Sbjct: 134 LKRGFAFNVYNHNILLKGLCR-NLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTA 342
+E +++L E+ SG S T +G L I +C K+G + +
Sbjct: 193 LEKALELANEMKGSGCSWSLVT----------WGIL-----IDAFC-KAGKMDEA----- 231
Query: 343 LTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
L E+ E + + ++I G+ G + +LF E++ +P
Sbjct: 232 ----MGFLKEMKFM------GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
+T T + +LG L + + + + + PN+Y T LID G EA QL +
Sbjct: 282 AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 463 SMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAG 518
M EK N VT+N II G +A+++ + M P +T+ +L G
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Query: 519 LVREGEEIF---------------------HDMVNKYRIEPLAEHHACMVDILG------ 551
+ E ++ H + + R+ + + +V+ LG
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Query: 552 ---------RAGQLEKALEFIRTMP----VEPGPAVWGTLLGACKIHK-NTDIARVASER 597
+AG + KA+E + + V + G CK N + R
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521
Query: 598 LFELDPGSVGYYVLLSNIYSVG 619
+ EL P Y LLS++ G
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEG 543
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 18/282 (6%)
Query: 353 IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
+ + R++ S V ++N +I G+ + E AL L EM + + + VT + A
Sbjct: 162 VSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDA 221
Query: 413 CAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKN---- 468
+ G + + +K LE ++ V T+LI + CG + + LFD + E+
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 469 TVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
+T+NT+I G+ G EA ++F+ M+ G+ P+ T+ ++ G +E ++ +
Sbjct: 282 AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 529 DMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLLGACKIH 585
M+ K EP A + +++ L + G + A+E + M P + LLG
Sbjct: 342 LMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 586 KNTDIARVASERLFEL-------DPGSVGYYVLLSNIYSVGR 620
+ D AS+ L+ + DP + Y L+ + R
Sbjct: 401 GDLD---EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/453 (20%), Positives = 186/453 (41%), Gaps = 54/453 (11%)
Query: 125 HAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDD 184
+ ++ G NL C V L + R L MP D ++NTVI G +
Sbjct: 146 NILLKGLCRNL-ECGKAVSLLREMRRNSL-------MP--DVFSYNTVIRGFCEGKELEK 195
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG-IQCLAFKFGFHRDAYVLTGLV 243
++++ +M +G T ++ A + ++ MG ++ + F G D V T L+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF-MGLEADLVVYTSLI 254
Query: 244 SLYSKCGDISTARLLFGMI----GKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR 299
+ CG++ + LF + P I YN +I G+ G+++ + ++F ++ G R
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 300 VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKL 359
+ T GL I G C + + + L + +
Sbjct: 315 PNVYTYTGL---------------IDGLC----GVGKTKEALQLLNL------------M 343
Query: 360 FDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSL 419
++ E +N +I+ ++GL A+ + + M P+ +T L G L
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 420 S-FGKWVHQLIK-SKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWN 473
K ++ ++K S +P++ ALI K + +A ++D + EK + VT N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
++ G ++A++L+K++ S I + T+ +++ G++ + + M
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM-RV 522
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
++P + C++ L + G L++A M
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 204/473 (43%), Gaps = 54/473 (11%)
Query: 130 GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWNTVITGLVRNCYYDDS 185
G NL+ S L++ + + S++ LA V +M E D V N+++ G D+
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
+ + MV G Q DS T T++ + + + D V+ G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV----------DRMVVKGC--- 217
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFREL----LVSGQRVS 301
+PDL+ Y +++G G+I+ ++ L +++ + G +
Sbjct: 218 ------------------QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
++ + L + L+L + ++ ++ +S+ L Y R + D +R L D
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN-YGRWS--DASRLLSD 316
Query: 362 ESPEK---TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
K V ++A+I + + G A L+ EM+ P+ T ++ ++
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNT 474
L K + +L+ SK+ PN+ LI + K + E +LF MS++ NTVT+ T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 475 IIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKY 534
+I G+ A +FK+M+ G+ P +T+ +L + G V +F + + +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF-EYLQRS 495
Query: 535 RIEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLL-GACK 583
++EP + M++ + +AG++E + ++ V+P + T++ G C+
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/509 (20%), Positives = 205/509 (40%), Gaps = 51/509 (10%)
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
DD++ +F DMV + +L A+A++ + + + + G + Y + L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 243 VSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
++ + + +S A + + K PD++ N++++G+ I +V L +++ G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA-- 356
+ S T LI ++ V G + + + +ID+A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 357 --RKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
+K+ E V +N +I AL+LF EM PN VT + +
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 415 QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTV 470
G S + + + + PN+ +ALID + K G + EA +L+D M ++ +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
T++++I G+ +H EA +F+ M+ P+ VT+ +++ A V EG E+F +M
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 531 VNKYRIE----------------------------------PLAEHHACMVDILGRAGQL 556
+ + P ++ ++D L G++
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 557 EKAL---EFIRTMPVEPGPAVWGTLL-GACKIHKNTDIARV-ASERLFELDPGSVGYYVL 611
E AL E+++ +EP + ++ G CK K D + S L + P V Y +
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 612 LSNIYSVGRNFPKAASIREVAKKRKLAKT 640
+S G A RE+ ++ L +
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDS 571
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/547 (20%), Positives = 207/547 (37%), Gaps = 97/547 (17%)
Query: 10 FINKACNLPHLA---QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSV---- 62
IN C L+ + A+++ GY+ D+ ++ L A +L +
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDDKYG 119
PD F FN L+ G + S ++AL + ++ PD TY + D
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 120 MLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITG 175
+ L + + ++++D + V A +F EM + + V +N++I
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
L + D+ ++ DM+ + + T ++ A + +L + K D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 236 AYVLTGLVSLYSKCGDISTARLLFG-MIGK---PDLIAYNAMISGYTCNGEIESSVKLFR 291
+ + L++ + + A+ +F MI K P+++ YN +I G+ ++ ++LFR
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 292 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLN 351
E+ QR G + N+ T L + +
Sbjct: 421 EM---SQR--------------------------------GLVGNTVTYTTLIHGFFQAR 445
Query: 352 EIDMARKLFDESPEKTV----AAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTIT 407
E D A+ +F + V ++ ++ G NG ETAL +F+ + ++
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK--------- 496
Query: 408 TTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK 467
+EP+IY +I+ K G + + LF S+S K
Sbjct: 497 --------------------------MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 468 ----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREG 523
N VT+ T++ G+ G EA LF+EM G P T+ +++ A G
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 524 EEIFHDM 530
E+ +M
Sbjct: 591 AELIREM 597
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 115/527 (21%), Positives = 206/527 (39%), Gaps = 103/527 (19%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHA 124
PDI N L+ GF S +++L + + PD++T+ I +G+ H
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQM-VEMGYQPDSFTFNTLI-------HGLFRHN 200
Query: 125 HA----------IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWN 170
A +V G +L +V+ K + LA + +M E V +N
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
T+I L +D++ +F +M G++ P V L I+CL +
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIR----------PNVVTYNSL-----IRCLC-NY 304
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK---PDLIAYNAMISGYTCNGEIESSV 287
G DA +RLL MI + P+++ ++A+I + G++ +
Sbjct: 305 GRWSDA------------------SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY 347
KL+ E+ + S + SS I G+C ++
Sbjct: 347 KLYDEM------IKRSIDPDIFTYSSL---------INGFC-----------------MH 374
Query: 348 SRLNEIDMARKLFDESPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNP 403
RL+E A+ +F+ K V +N +I G+ + + + LF+EM N
Sbjct: 375 DRLDE---AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 404 VTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD- 462
VT TT + Q + V + + S + P+I + L+D G + A +F+
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 463 ---SMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGL 519
S E + T+N +I G G + LF + G+ P+ VT+ +++ GL
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 520 VREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
E + +F +M + + P + + ++ R G + E IR M
Sbjct: 552 KEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/402 (18%), Positives = 169/402 (42%), Gaps = 24/402 (5%)
Query: 26 QLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN----PDIFLFNVLVKGFSVNA 81
++++ G Q DL + + L G A +L + P + ++N ++
Sbjct: 211 RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGF-----GSNLF 136
+ + ++ L+T + + P+ TY I + YG A ++ N+
Sbjct: 271 NVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCN--YGRWSDASRLLSDMIERKINPNVV 327
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDM 192
S+L+D + K ++ A K++DEM +R D ++++I G + D++ +F M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
++ + T T++ + + + GM + + G + T L+ + + +
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 253 STARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGL 308
A+++F + PD++ Y+ ++ G NG++E+++ +F L S T +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 309 IPVSSPFGHLH----LTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
I G + L CS+ VK ++ +++ + + + R++ +E P
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 365 EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
+N +I + ++G + L +EM + F + TI
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 609
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 120/552 (21%), Positives = 234/552 (42%), Gaps = 43/552 (7%)
Query: 18 PHLA-QIHAQLILNGYQSDLASITKLTQKLFDFGAT---RHARALFFSVRNPDIFL---- 69
PH+A QI ++I + +L + L L + ++ AR +F + + L
Sbjct: 147 PHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQT 206
Query: 70 FNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIV- 128
FNVLV G+ + ++ + + + PDN TY + A K G L ++
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAM--SKKGRLSDLKELLL 264
Query: 129 ----DGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNC 180
+G N ++LV Y K + A ++ + M + D +N +I GL
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD---AY 237
+ +++ M + +Q D T T++ EL G+ ++ D A
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL-----GLSLEARKLMEQMENDGVKAN 379
Query: 238 VLTGLVSLYSKCGD------ISTARLLFGMIG-KPDLIAYNAMISGYTCNGEIESSVKLF 290
+T +SL C + + L M G PD++ Y+ +I Y G++ ++++
Sbjct: 380 QVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439
Query: 291 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRL 350
RE+ G ++++ T+ ++ L ++ K G I + L + R
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE 499
Query: 351 NEIDMARKLFDESPE----KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
+++ A +++DE + TV+ +N++I G +G TE A+ F E+ + P+ T
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 407 TTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
+ + + G + ++ ++ IK + +P+ Y L++ K G +A F+++
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKH-SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Query: 466 EK---NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVRE 522
E+ +TVT+NT+I + EA L EM G+ P T+ S + G + E
Sbjct: 619 EEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSE 678
Query: 523 GEEIFHDMVNKY 534
+E+ K+
Sbjct: 679 TDELLKKFSGKF 690
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 226/525 (43%), Gaps = 52/525 (9%)
Query: 134 NLFVCSSLVDLYFKFSR---VGLARKVFDEMPE----RDTVAWNTVITGLVRNCYYDDSI 186
NL C++L+ ++ + AR+VFD+M + + +N ++ G +D++
Sbjct: 165 NLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDAL 224
Query: 187 QVFRDMVAN-GVQVDSTTVVTVLPA------VAELQELGVGMGIQCLAFKFGFHRDAYVL 239
+ MV+ V D+ T T+L A +++L+EL + M K G +
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMK------KNGLVPNRVTY 278
Query: 240 TGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLF---RE 292
LV Y K G + A + ++ + PDL YN +I+G G + ++L +
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 293 LLVSGQRVSSSTMV-GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLN 351
L + V+ +T++ G + L ++ VK+ ++++ L R
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 352 EIDMARKLFDE---SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITT 408
++L D SP+ + ++ +I Y + G AL + +EM N +T+ T
Sbjct: 399 VTRKVKELVDMHGFSPD--IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 409 TLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTA---LIDMYAKCGNISEARQLFDSMS 465
L A + L H L+ S + I LI + + + +A +++D M
Sbjct: 457 ILDALCKERKLD---EAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMK 513
Query: 466 E----KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
+ T+N++I G HG A++ F E+ SG+ P TF SI+ G V
Sbjct: 514 KVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 522 EGEEIFHDMVNKYRIEPLAEHHAC--MVDILGRAGQLEKALEFIRTM--PVEPGPAVWGT 577
+ E +++ + K+ +P +++ C +++ L + G EKAL F T+ E + T
Sbjct: 574 KAFEFYNESI-KHSFKP--DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNT 630
Query: 578 LLGA-CKIHKNTDIARVASERLFE-LDPGSVGYYVLLSNIYSVGR 620
++ A CK K + + SE + L+P Y +S + G+
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 363 SPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG---SL 419
SP + A ++ +S Y G AL +FQ+M+ + PN +T T L + S+
Sbjct: 126 SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSI 185
Query: 420 SFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-----NTVTWNT 474
S + V + + N+ L++ Y G + +A + + M + + VT+NT
Sbjct: 186 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 475 IIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKY 534
I+ G + +L +M +G+ P+ VT+ +++Y G ++E +I +++ +
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV-ELMKQT 304
Query: 535 RIEPLAEHHACMVDILGRAGQLEKALEF---IRTMPVEPGPAVWGTLLGAC 582
+ P + +++ L AG + + LE ++++ ++P + TL+ C
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 183/448 (40%), Gaps = 24/448 (5%)
Query: 152 GLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAV 211
G A + F + E+ + TG + + ++D+ +F +MV + +L A
Sbjct: 29 GAAARAFSDYREK-------LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTAT 81
Query: 212 AELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDL 267
A L+ + +G D Y T L+ + +C +S A + G + K P +
Sbjct: 82 ANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSI 141
Query: 268 IAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGY 327
+ + +++ G+ I + L ++ SG + LI G L++ +
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 328 CVKSG----AISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGL 383
K G ++ +++ T L + M R + S V + A+I + + G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 384 TETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTA 443
+ A L++EM+ + PN VT + ++ G L K L+ SK PN+
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 444 LIDMYAKCGNISEARQLFDSMS----EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
LI + K + E +LF MS + T+NT+I GY G AL +F M+
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 500 IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
+ P +T +L+ G + F DM + + ++ M+ L +A ++EKA
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI-MIHGLCKADKVEKA 440
Query: 560 LEFIRTMPVE---PGPAVWGTL-LGACK 583
E +PVE P + + LG CK
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCK 468
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/505 (20%), Positives = 187/505 (37%), Gaps = 135/505 (26%)
Query: 53 RHARALFFSVR------NPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTY 106
R+ ++FS + + D++ F +L+ F + S ++++ + ++ P T+
Sbjct: 86 RYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKM-MKLGYEPSIVTF 144
Query: 107 A-----FTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEM 161
F + D + +++ + G+ N+ V ++L+D K + +A ++ +EM
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILM--VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202
Query: 162 PER----DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQEL 217
++ D V +NT++TGL + + D+ ++ RDM+ + D T
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT-------------- 248
Query: 218 GVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFG-MIG---KPDLIAYNAM 273
T L+ ++ K G++ A+ L+ MI P+ + YN++
Sbjct: 249 ---------------------FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 274 ISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGA 333
I+G +G + + K F +L+ S G P + L I G+C
Sbjct: 288 INGLCMHGRLYDAKKTF-DLMASK---------GCFPNVVTYNTL-----ISGFC----- 327
Query: 334 ISNSSVSTALTTIYSRLNEIDMARKLFD----ESPEKTVAAWNAMISGYTQNGLTETALS 389
+ +D KLF E + +N +I GY Q G AL
Sbjct: 328 ---------------KFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 390 LFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYA 449
+F M++ TP+ +T C L L
Sbjct: 373 IFCWMVSRRVTPDIIT------HCILLHGLCVN--------------------------- 399
Query: 450 KCGNISEARQLFDSMSEKNT----VTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGV 505
G I A FD M E V +N +I G +A +LF + G+ P
Sbjct: 400 --GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 506 TFLSILYACSHAGLVREGEEIFHDM 530
T+ ++ G RE +E+ M
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRM 482
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 139/620 (22%), Positives = 250/620 (40%), Gaps = 75/620 (12%)
Query: 61 SVRNPDIFLF----NVLVKGFSVNASPSSSIALYTHLRLRT-NLAPDNYTY-----AFTI 110
+R+ D +F NVLV+ N S SIAL RL+ P TY AF
Sbjct: 190 QIRDDDKEVFGEFLNVLVRKHCRNGS--FSIALEELGRLKDFRFRPSRSTYNCLIQAFLK 247
Query: 111 AASPDDKYGMLLH-----AHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER- 164
A D L+H A+ +DGF F + +VG R+ +
Sbjct: 248 ADRLDS--ASLIHREMSLANLRMDGFTLRCFA--------YSLCKVGKWREALTLVETEN 297
Query: 165 ---DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGM 221
DTV + +I+GL +++++ M A + T T+L ++LG
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 222 GIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTA-RLLFGMIG---KPDLIAYNAMISGY 277
+ + G + + LV Y GD S A +LL M+ P + YN +I G
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GS 416
Query: 278 TCNGE-------IESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVK 330
C + ++ + K + E+L +G ++ + G S+ +
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 331 SGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA----WNAMISGYTQNGLTET 386
G I ++S + + +++++A LF+E + A + M+ + + GL E
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 387 ALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALID 446
A F EM TPN VT T + A + +S+ + + + S+ PNI +ALID
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 447 MYAKCGNISEARQLFDSM-------------------SEK-NTVTWNTIIFGYGLHGYGH 486
+ K G + +A Q+F+ M SE+ N VT+ ++ G+
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 487 EALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACM 546
EA KL M G P+ + + +++ G + E +E+ +M +++ ++ +
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM-SEHGFPATLYTYSSL 715
Query: 547 VDILGRAGQLEKALEFIRTM---PVEPGPAVWGTLL-GACKIHKNTDIARVASERLFE-- 600
+D + + + A + + M P ++ ++ G CK+ K TD A + + E
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK-TDEAYKLMQMMEEKG 774
Query: 601 LDPGSVGYYVLLSNIYSVGR 620
P V Y ++ +G+
Sbjct: 775 CQPNVVTYTAMIDGFGMIGK 794
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 162/413 (39%), Gaps = 34/413 (8%)
Query: 151 VGLARKVFDEMPERDTVAWNTVITGLVRNCY-----YDDSIQVFRDMVANGVQVDSTTVV 205
+ LA K + EM V ++ R C Y+ + V R+M+ G D++T
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTR-CLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 206 TVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK- 264
VL + ++ + + + G D Y T +V + K G I AR F + +
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 265 ---PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLT 321
P+++ Y A+I Y ++ + +LF +L G + T LI G +
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 322 CSIQGYCVKSGAIS----------------NSSVSTALTTIYSRLNEIDMARKLFD---- 361
C I S + N AL + + + ++ ARKL D
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
E E ++A+I G + G + A + EM F T ++ + ++
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIF 477
V + + PN+ + T +ID K G EA +L M EK N VT+ +I
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
G+G+ G L+L + M G+ P+ VT+ ++ C G + + +M
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 165/433 (38%), Gaps = 52/433 (12%)
Query: 101 PDNYTYAFTI---AASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKV 157
PD TY+ + + + LL G ++++ + +VD + K + ARK
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 158 FDEMPE----RDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAE 213
F+EM E + V + +I ++ + ++F M++ G LP +
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC----------LPNIVT 590
Query: 214 LQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSK-CG--DISTARLLFGMIG----KPD 266
L G H A + ++ + CG D+ + F +P+
Sbjct: 591 YSALIDG------------HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 267 LIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQG 326
++ Y A++ G+ + +E + KL + + G + LI G L ++
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 327 YCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAA----WNAMISGYTQNG 382
+ G + ++L Y ++ D+A K+ + E + A + MI G + G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 383 LTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVST 442
T+ A L Q M PN VT T + +G + + + + SK + PN
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 443 ALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGY-----GLHGYGHEALKLFKEMLH 497
LID K G + A L + M + + W T GY G + E+L L E+
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTH---WPTHTAGYRKVIEGFNKEFIESLGLLDEIGQ 875
Query: 498 SGIHPSGVTFLSI 510
P FLS+
Sbjct: 876 DDTAP----FLSV 884
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 203/466 (43%), Gaps = 21/466 (4%)
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAH 125
D++ +++ + F + S ++A+ + ++ PD T + + K + A
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLSSLLNGYCHSKR--ISDAV 173
Query: 126 AIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGL 176
A+VD G+ + F ++L+ F ++ A + D+M +R D V + TV+ GL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+ D ++ + M A ++ + T++ ++ + + + V + + G +
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 237 YVLTGLVSLYSKCGDISTA-RLLFGMIGK---PDLIAYNAMISGYTCNGEIESSVKLFRE 292
L++ G S A RLL M+ K P+++ +NA+I + G++ + KL E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
++ + T LI L + + V + N L + +
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 353 IDMARKLFDESPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITT 408
++ +LF E ++ + +I G+ Q G ++A +F++M++ + +T +
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 409 TLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK- 467
L G L + + ++ +E NI++ +I+ K G + EA LF S+S K
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP 533
Query: 468 NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYA 513
+ VT+NT+I G EA LF++M G P+ T+ +++ A
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/491 (20%), Positives = 210/491 (42%), Gaps = 64/491 (13%)
Query: 130 GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWNTVITGLVRNCYYDDS 185
G +L+ S ++ + + S++ LA V +M E D V ++++ G + D+
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
+ + MV G + D+ T T++ + H A LV
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLF-------------------LHNKASEAVALVDQ 213
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM 305
+ G +PDL+ Y +++G G+I+ ++ L ++ R+ ++ +
Sbjct: 214 MVQRG------------CQPDLVTYGTVVNGLCKRGDIDLALNLLNKM--EAARIKANVV 259
Query: 306 VGLIPVSSPFGHLHLTCSIQGYC------VKSGAISNSSVSTALTTIYSRLNEIDMARKL 359
+ + S + H+ ++ + ++ ++ +S+ L Y R ++ A +L
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN-YGRWSD---ASRL 315
Query: 360 FDESPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQ 415
EK V +NA+I + + G A L +EM+ P+ +T ++
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 416 LGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVT 471
L K + + + SK+ PNI LI+ + KC + + +LF MS++ NTVT
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 472 WNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILY--ACSHAGLVREGEEIFHD 529
+ TII G+ G A +FK+M+ + + P+ + SIL CS+ L + +
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRV-PTDIMTYSILLHGLCSYGKL--DTALVIFK 492
Query: 530 MVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPAVWGTLL-GACK---IH 585
+ K +E + M++ + +AG++ +A + ++ ++P + T++ G C +
Sbjct: 493 YLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552
Query: 586 KNTDIARVASE 596
+ D+ R E
Sbjct: 553 EADDLFRKMKE 563
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 138/327 (42%), Gaps = 22/327 (6%)
Query: 2 IQRNSII--TFINKACNLPHL---AQIHAQLILNGYQSDLASITKLTQKLFDFG----AT 52
I+ N +I T I+ C H+ + ++ G + ++ + L L ++G A+
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 53 RHARALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTY-----A 107
R + NP++ FN L+ F + L+ + R+ + PD TY
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS-IDPDTITYNLLING 372
Query: 108 FTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER--- 164
F + D+ M + N+ ++L++ + K RV ++F EM +R
Sbjct: 373 FCMHNRLDEAKQMF--KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 165 -DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGI 223
+TV + T+I G + D + VF+ MV+N V D T +L + +L + I
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 224 QCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIG-KPDLIAYNAMISGYTCNGE 282
K + ++ ++ K G + A LF + KPD++ YN MISG
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRL 550
Query: 283 IESSVKLFRELLVSGQRVSSSTMVGLI 309
++ + LFR++ G +S T LI
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 132/291 (45%), Gaps = 18/291 (6%)
Query: 343 LTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
L+ I + +D+ + P ++ +N ++S + E +SL ++M T + +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
T + ++ + LS V + EP+I ++L++ Y IS+A L D
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 463 SMSE----KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAG 518
M E +T T+ T+I G LH EA+ L +M+ G P VT+ +++ G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV-----NG 232
Query: 519 LVREGE-EIFHDMVNKY---RIEPLAEHHACMVDILGRAGQLEKALEF---IRTMPVEPG 571
L + G+ ++ +++NK RI+ ++D L + +E A++ + T + P
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 572 PAVWGTLLGA-CKIHKNTDIARVASERL-FELDPGSVGYYVLLSNIYSVGR 620
+ +L+ C + +D +R+ S L +++P V + L+ + G+
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 174/457 (38%), Gaps = 55/457 (12%)
Query: 10 FINKACNLPHLA---QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSV---- 62
FIN C L+ + A+++ GY+ D+ +++ L A AL +
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTI---AASPDDKYG 119
PD F F L+ G ++ S ++AL + R PD TY + D
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 120 MLLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITG 175
+ L +N+ + ++++D K+ V +A +F EM + + V +N++I
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 176 LVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRD 235
L + D+ ++ +M+ + + T ++ A + +L + + D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 236 AYVLTGLVSLYSKCGDISTARLLFG-MIGK---PDLIAYNAMISGYTCNGEIESSVKLFR 291
L++ + + A+ +F M+ K P++ YN +I+G+ +E V+LFR
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 292 EL-----------------------------LVSGQRVSSSTMVGLIPVS------SPFG 316
E+ +V Q VS+ ++ S +G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 317 HLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF-DESPEKTVAAWNAMI 375
L I Y KS N + + + ++ A LF S + V +N MI
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMI 542
Query: 376 SGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
SG L + A LF++M PN T T + A
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/403 (18%), Positives = 174/403 (43%), Gaps = 27/403 (6%)
Query: 26 QLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR----NPDIFLFNVLVKGFSVNA 81
Q++ G Q DL + + L G A L + ++ +FN ++
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR 272
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGF-----GSNLF 136
++ L+T + + + P+ TY I + YG A ++ N+
Sbjct: 273 HVEVAVDLFTEMETK-GIRPNVVTYNSLINCLCN--YGRWSDASRLLSNMLEKKINPNVV 329
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDM 192
++L+D +FK ++ A K+ +EM +R DT+ +N +I G + D++ Q+F+ M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
V+ + T T++ + + + G+ + + G + T ++ + + GD
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 253 STARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS---SSTM 305
+A+++F + D++ Y+ ++ G G++++++ +F+ L S ++ +TM
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 306 V-GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESP 364
+ G+ L CS+ +K ++ +++ + L + D+ RK+ ++
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 365 EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTIT 407
+N +I ++ + L +EM ++ F + TI+
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 110/518 (21%), Positives = 210/518 (40%), Gaps = 63/518 (12%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHA 124
P I N L+ GF S ++AL + + PD T+ + +G+ H
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQM-VEMGYQPDTVTFTTLV-------HGLFQHN 184
Query: 125 HA----------IVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWN 170
A +V G +L ++++ K LA + ++M E D V ++
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
TVI L + + DD++ +F +M G++ D T +++ + + +
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFG-MIGK---PDLIAYNAMISGYTCNGEIESS 286
+ + L+ ++K G + A LF MI + P+++ YN++I+G+ + ++ +
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 287 VKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTI 346
++F L+VS +P + L I G+C + +
Sbjct: 365 QQIF-TLMVSKD---------CLPDVVTYNTL-----INGFCKAKKVVDGMELFR----- 404
Query: 347 YSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
DM+R+ + +I G+ Q + A +F++M++ PN +T
Sbjct: 405 -------DMSRR----GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 407 TTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE 466
T L + G L V + ++ +EP+IY + + K G + + LF S+S
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 467 K----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVRE 522
K + + +NT+I G+ G EA LF +M G P T+ +++ A G
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 523 GEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL 560
E+ +M R A + + D+L G+L+K
Sbjct: 574 SAELIKEM-RSCRFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/488 (20%), Positives = 198/488 (40%), Gaps = 51/488 (10%)
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGL 242
D+++ +F +MV + +L A+A++++ + + G + Y +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 243 VSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQ 298
++ + +S A + G + K P ++ N++++G+ I +V L +++ G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 299 RVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARK 358
+ + T L+ ++ V G + A+ + E D+A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 359 LFDESP----EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACA 414
L ++ E V ++ +I + + AL+LF EM P+ T ++ +S
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 415 QLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTV 470
G S + + + + PN+ +LID +AK G + EA +LFD M ++ N V
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 471 TWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
T+N++I G+ +H EA ++F M+ P VT+ +++ A V +G E+F DM
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 531 VNK----------------------------------YRIEPLAEHHACMVDILGRAGQL 556
+ + P + ++D L + G+L
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 557 EKAL---EFIRTMPVEPGPAVWGTLL-GACKIHKNTDIARV-ASERLFELDPGSVGYYVL 611
EKA+ E+++ +EP + + G CK K D + S L + P + Y +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 612 LSNIYSVG 619
+S G
Sbjct: 527 ISGFCKKG 534
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 184/464 (39%), Gaps = 90/464 (19%)
Query: 6 SIITF---INKACNLPHLAQIHA---QLILNGYQSDLASITKLTQKLFDFGATRHARALF 59
SI+T +N C+ +++ A Q++ GYQ D + T L LF A AL
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 60 FSVR----NPDIFLFNVLVKGFSVNASPS-------------------------SSIALY 90
+ PD+ + ++ G P S+ Y
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 91 THLRLRTNL---------APDNYTYAFTIAASPDDKYGMLLHAHAIVDGF-----GSNLF 136
H+ NL PD +TY+ I+ + YG A ++ N+
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN--YGRWSDASRLLSDMLERKINPNVV 311
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDM 192
+SL+D + K ++ A K+FDEM +R + V +N++I G + D++ Q+F M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
V+ D T T++ + +++ GM + + G + T L+ + + D
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 253 STARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGL 308
A+++F + P+++ YN ++ G NG++E ++ +F L Q+ +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL----QKSKMEPDIYT 487
Query: 309 IPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTV 368
+ S +G C K+G + + D+ L + + V
Sbjct: 488 YNIMS-----------EGMC-KAGKVEDG---------------WDLFCSLSLKGVKPDV 520
Query: 369 AAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
A+N MISG+ + GL E A +LF +M P+ T T + A
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 149/329 (45%), Gaps = 13/329 (3%)
Query: 82 SPSSSIALYTHLRLRTNLA----PDNYTYAFTIAASPDDKYGM-LLHAHAIVDGFGSNLF 136
+PSS + LRL +L+ D Y+ +A +D+ G L H + +
Sbjct: 65 NPSSRCSTSDILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTIT 124
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVAN- 195
+ L+ ++ R+ + R++FD MP RD +W V G + Y+D+ +F M+ +
Sbjct: 125 FINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHS 184
Query: 196 ---GVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGF--HRDAYVLTGLVSLYSKCG 250
++ S + VL A A +++ +G + L K GF D+Y+ L+ Y +
Sbjct: 185 QKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFR 244
Query: 251 DISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIP 310
+ A L+ + + +A+ A ++ GE + ++ F E+ G + + S ++
Sbjct: 245 CLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLK 304
Query: 311 VSSPFGHLHLTC-SIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKT-V 368
S + + +K G S+ + L +Y + ++ A K+F S ++T V
Sbjct: 305 ACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSV 364
Query: 369 AAWNAMISGYTQNGLTETALSLFQEMMTT 397
+ WNAM++ Y QNG+ A+ L +M T
Sbjct: 365 SCWNAMVASYMQNGIYIEAIKLLYQMKAT 393
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 8/265 (3%)
Query: 324 IQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGL 383
+Q + +KS + L ++ +D+ R++FD P + +W + G + G
Sbjct: 110 LQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGD 169
Query: 384 TETALSLFQEMMTTE----FTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNL--EPN 437
E A LF M+ F + L ACA + GK VH L E +
Sbjct: 170 YEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEED 229
Query: 438 IYVSTALIDMYAKCGNISEARQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLH 497
Y+S +LI Y + + +A + +S NTV W + G E ++ F EM +
Sbjct: 230 SYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGN 289
Query: 498 SGIHPSGVTFLSILYACSH-AGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQL 556
GI + F ++L ACS + R G+++ + + K E ++++ G+ G++
Sbjct: 290 HGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAI-KLGFESDCLIRCRLIEMYGKYGKV 348
Query: 557 EKALEFIRTMPVEPGPAVWGTLLGA 581
+ A + ++ E + W ++ +
Sbjct: 349 KDAEKVFKSSKDETSVSCWNAMVAS 373
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 10/268 (3%)
Query: 242 LVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQR-- 299
L+ ++ CG + R +F + D ++ + G G+ E + LF +L Q+
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 300 --VSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAIS--NSSVSTALTTIYSRLNEIDM 355
+ S + ++ + L + C K G I +S +S +L Y ++
Sbjct: 189 FKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLED 248
Query: 356 ARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQ 415
A + + AW A ++ + G + + F EM N + L AC+
Sbjct: 249 ANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSW 308
Query: 416 L--GSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKNTVT-W 472
+ G S G+ VH E + + LI+MY K G + +A ++F S ++ +V+ W
Sbjct: 309 VSDGGRS-GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCW 367
Query: 473 NTIIFGYGLHGYGHEALKLFKEMLHSGI 500
N ++ Y +G EA+KL +M +GI
Sbjct: 368 NAMVASYMQNGIYIEAIKLLYQMKATGI 395
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 165/384 (42%), Gaps = 18/384 (4%)
Query: 165 DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQ 224
+ V +N +I GL + +++ + +D+ ++ D T T++ + ++QE +G+ +
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 225 CLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL------FGMIGKPDLIAYNAMISGYT 278
F ++ LV K G I A L FG+ P+L YNA+I
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV--SPNLFVYNALIDSLC 378
Query: 279 CNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSS 338
+ + LF + G R + T LI + G L S G V +G +
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 339 VSTALTTIYSRLNEIDMAR----KLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEM 394
+L + + +I A ++ ++ E TV + +++ GY G AL L+ EM
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 395 MTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNI 454
P+ T TT LS + G + + + N++PN +I+ Y + G++
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 455 SEARQLFDSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG-IHPSGVTFLS 509
S+A + M+EK +T ++ +I G L G EA K+F + LH G + + +
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTG 617
Query: 510 ILYACSHAGLVREGEEIFHDMVNK 533
+L+ G + E + +MV +
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQR 641
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 120/608 (19%), Positives = 226/608 (37%), Gaps = 135/608 (22%)
Query: 37 ASITKLTQKLFDFGATRHA-----RALFFSVRNPDIFLFNVLVKGFSVNASPSSSIALYT 91
A+++ L + L G A R + F V +P++F++N L+ + L+
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGV-SPNLFVYNALIDSLCKGRKFHEAELLFD 391
Query: 92 HLRLRTNLAPDNYTYA-----FTIAASPDDKYGMLLHAHAIVDGFGSNLFVCSSLVDLYF 146
+ + L P++ TY+ F D L + G +++ +SL++ +
Sbjct: 392 RMG-KIGLRPNDVTYSILIDMFCRRGKLDTALSFL--GEMVDTGLKLSVYPYNSLINGHC 448
Query: 147 KFSRVGLARKVFDEMP----ERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDST 202
KF + A EM E V + +++ G + +++++ +M G+
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 203 TVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMI 262
T T+L + F+ G RDA V L+++ + +
Sbjct: 509 TFTTLLSGL----------------FRAGLIRDA------VKLFNEMAEWNV-------- 538
Query: 263 GKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTC 322
KP+ + YN MI GY G++ + + +E+ T G++P + + L
Sbjct: 539 -KPNRVTYNVMIEGYCEEGDMSKAFEFLKEM----------TEKGIVPDTYSYRPL---- 583
Query: 323 SIQGYCVKSGAISNSSVSTALTTIYSRLNEI-------------------DMARKLFDES 363
I G C+ A L LNEI + +++
Sbjct: 584 -IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 364 PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSL--SF 421
+ + + +I G ++ + L +EM P+ V T+ + A ++ G +F
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE--------------- 466
G W L+ ++ PN TA+I+ K G ++EA L M
Sbjct: 703 GIW--DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 467 ------------------------KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHP 502
NT T+N +I G+ G EA +L M+ G+ P
Sbjct: 761 ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 503 SGVTFLSILYACSHAGLVREGEEIFHDMVNK-YRIEPLAEH---HACMVDILGRAGQLEK 558
+T+ +++ V++ E+++ M K R + +A + H C V AG++ K
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV-----AGEMGK 875
Query: 559 ALEFIRTM 566
A E M
Sbjct: 876 ATELRNEM 883
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 106/521 (20%), Positives = 187/521 (35%), Gaps = 139/521 (26%)
Query: 11 INKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVR----NPD 66
INKA L H ++ G + + T L LF G R A LF + P+
Sbjct: 488 INKALRLYH------EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 67 IFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLL---- 122
+NV+++G+ S + + + PD Y+Y I +G+ L
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMT-EKGIVPDTYSYRPLI-------HGLCLTGQA 593
Query: 123 -HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAWNTVITGLVRNCY 181
A VDG E + + + ++ G R
Sbjct: 594 SEAKVFVDGLHKG--------------------------NCELNEICYTGLLHGFCREGK 627
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
++++ V ++MV GV +D ++ + ++ + G+ G D + T
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 242 LVSLYSKCGDISTARLLFG----MIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELL 294
++ SK GD A FG MI + P+ + Y A+I+G G + + E+L
Sbjct: 688 MIDAKSKTGDFKEA---FGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA-----EVL 739
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
S + PVSS + N I ++ E+D
Sbjct: 740 CSKMQ----------PVSS--------------------VPNQVTYGCFLDILTK-GEVD 768
Query: 355 MARKL-----FDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTT 409
M + + + A +N +I G+ + G E A L M+ +P+ +T TT
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT- 827
Query: 410 LSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK-- 467
+I+ + ++ +A +L++SM+EK
Sbjct: 828 ----------------------------------MINELCRRNDVKKAIELWNSMTEKGI 853
Query: 468 --NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVT 506
+ V +NT+I G + G +A +L EML G+ P+ T
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 199/454 (43%), Gaps = 51/454 (11%)
Query: 183 DDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF-GFHRDAYVLTG 241
DD+I +F++M+ + A+A ++ + + C + G + Y L
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDF-CKQLELNGIAHNIYTLNI 128
Query: 242 LVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSG 297
+++ + +C A + G + K PD +N +I G G++ +V L ++ +G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 298 QRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMAR 357
+ P + + + G C +SG S + +D+ R
Sbjct: 189 CQ----------PDVVTYNSI-----VNGIC-RSGDTSLA---------------LDLLR 217
Query: 358 KLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
K+ + + + V ++ +I ++G + A+SLF+EM T + VT + + + G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWN 473
+ G + + + S+ + PN+ L+D++ K G + EA +L+ M + N +T+N
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
T++ GY + EA + M+ + P VTF S++ V +G ++F + ++K
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN-ISK 396
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTM---PVEPGPAVWGTLL-GAC---KIHK 586
+ A ++ +V ++G+++ A E + M V P +G LL G C K+ K
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 587 NTDIARVASERLFELDPGSVGYYVLLSNIYSVGR 620
+I + ++D G V Y ++ + G+
Sbjct: 457 ALEIFEDLQKS--KMDLGIVMYTTIIEGMCKGGK 488
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 186/461 (40%), Gaps = 69/461 (14%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFT---IAASPDDKYGML 121
PD FN L+KG + S ++ L + + PD TY I S D +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLV 177
L +++F S+++D + + A +F EM + V +N+++ GL
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTT---VVTVLPAVAELQELG------VGMGIQCLAF 228
+ ++D + +DMV+ + + T ++ V +LQE + GI
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 229 KFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVK 288
+ D Y + +S + D L+ PD++ + ++I GY ++ +K
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLD-----LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 289 LFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYS 348
+FR + + GL+ + + L +QG+C +SG
Sbjct: 390 VFRNI----------SKRGLVANAVTYSIL-----VQGFC-QSG---------------- 417
Query: 349 RLNEIDMARKLFDES------PEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPN 402
+I +A +LF E P+ V + ++ G NG E AL +F+++ ++
Sbjct: 418 ---KIKLAEELFQEMVSHGVLPD--VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 403 PVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFD 462
V TT + + G + + + K ++PN+ T +I K G++SEA L
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 463 SMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
M E N T+NT+I + G + KL +EM G
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 103/497 (20%), Positives = 181/497 (36%), Gaps = 90/497 (18%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFS-VR 63
N +I + C + +++ GY+ D + L + LF G A L V
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 64 N---PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDD---- 116
N PD+ +N +V G + S ++ L + R N+ D +TY+ I + D
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCID 245
Query: 117 ----------------------------------KYGMLLHAHAIVDGFGSNLFVCSSLV 142
G LL + N+ + L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 143 DLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQ 198
D++ K ++ A +++ EM R + + +NT++ G ++ + MV N
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 199 VDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLL 258
D T +++ ++ + GM + K G +A + LV + + G I A L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 259 FG-MIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSP 314
F M+ PD++ Y ++ G NG++E ++++F +L S
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM---------------D 470
Query: 315 FGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEK----TVAA 370
G + T I+G C K G + + A LF P K V
Sbjct: 471 LGIVMYTTIIEGMC-KGGKVED-------------------AWNLFCSLPCKGVKPNVMT 510
Query: 371 WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIK 430
+ MISG + G A L ++M PN T T + A + G L+ + + +K
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Query: 431 SKNLEPNIYVSTALIDM 447
S + +IDM
Sbjct: 571 SCGFSADASSIKMVIDM 587
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/520 (21%), Positives = 193/520 (37%), Gaps = 89/520 (17%)
Query: 10 FINKACNLPHLA---QIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSV---- 62
IN C L+ ++I GY+ D + + L L G A L +
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 63 RNPDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLL 122
P + N LV G +N S ++ L + + T P+ TY +
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETGFQPNEVTYGPVLKV---------- 221
Query: 123 HAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVR 178
+C S + LA ++ +M ER D V ++ +I GL +
Sbjct: 222 --------------MCKS--------GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 179 NCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYV 238
+ D++ +F +M G + D T++ C A ++
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF-------------CYAGRWD------- 299
Query: 239 LTGLVSLYSKCGDISTARLLFGMIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELLV 295
A+LL MI + PD++A++A+I + G++ + +L +E++
Sbjct: 300 --------------DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 296 SGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDM 355
G + T LI L + V G N L Y + N ID
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 356 ARKLFDESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
+LF + + V A +N +I G+ + G E A LFQEM++ P+ V+ L
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 412 ACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK---- 467
G + + I+ +E +I + +I + +A LF S+ K
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 468 NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
+ T+N +I G G EA LF++M G P+G T+
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 198/486 (40%), Gaps = 58/486 (11%)
Query: 154 ARKVFDEM----PERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLP 209
A +F EM P + ++ + + + R YD + + + M G+ + T+ ++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 210 AVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFG----MIGKP 265
++L + K G+ D + L++ G +S A L M KP
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 266 DLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCS-- 323
LI NA+++G NG++ +V L ++ +G + + T ++ V G L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 324 ------------------IQGYCVKSGAISNS----------------SVSTALTTIYSR 349
I G C K G++ N+ + T L +
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLC-KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 350 LNEIDMARKLFDESPEKT----VAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVT 405
D KL + ++ V A++A+I + + G A L +EM+ +P+ VT
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 406 ITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
T+ + + L + L+ SK PNI LI+ Y K I + +LF MS
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 466 EK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
+ +TVT+NT+I G+ G A +LF+EM+ + P V++ +L G
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTL 578
+ EIF + K ++E + ++ + A +++ A + ++P V+P + +
Sbjct: 475 KALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 579 LGA-CK 583
+G CK
Sbjct: 534 IGGLCK 539
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 120/279 (43%), Gaps = 10/279 (3%)
Query: 351 NEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
+ +D+ +++ P + ++ + S + + L L ++M N T++ +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE---- 466
+ C + LS I EP+ + LI+ G +SEA +L D M E
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 467 KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
+T N ++ G L+G +A+ L M+ +G P+ VT+ +L +G E+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 527 FHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVEPGPA---VWGTLL-GAC 582
M + +I+ A ++ ++D L + G L+ A M ++ A ++ TL+ G C
Sbjct: 235 LRKMEER-KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 583 KIHKNTDIARVASERL-FELDPGSVGYYVLLSNIYSVGR 620
+ D A++ + + ++ P V + L+ G+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 135/360 (37%), Gaps = 82/360 (22%)
Query: 66 DIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGML---- 121
DI ++ L++GF L + ++ + PD AF+ K G L
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDM-IKRKITPD--VVAFSALIDCFVKEGKLREAE 337
Query: 122 -LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGL 176
LH I G + +SL+D + K +++ A + D M + + +N +I G
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+ DD +++FR M GV D+ T T++ EL +L V + F+ R
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL----FQEMVSRRV 453
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
+PD+++Y ++ G NGE E ++++F
Sbjct: 454 ---------------------------RPDIVSYKILLDGLCDNGEPEKALEIF------ 480
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
+++ S M I + + H G C N+S ++D A
Sbjct: 481 -EKIEKSKMELDIGIYNIIIH--------GMC-------NAS-------------KVDDA 511
Query: 357 RKLFDESPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
LF P K V +N MI G + G A LF++M +PN T + A
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 198/457 (43%), Gaps = 47/457 (10%)
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+R+ +D+I +F DMV + +L A+ +L++ V + + G D
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRE 292
Y +++ + C +S A + G + K PD + ++++G+ + +V L
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL--- 177
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
V +G P I Y AI +S T R+N+
Sbjct: 178 -------VDKMVEIGYKP------------DIVAY----NAIIDSLCKT------KRVND 208
Query: 353 -IDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLS 411
D +++ + V + A+++G + A L +M+ + TPN +T + L
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 412 ACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK---- 467
A + G + K + + + +++P+I ++LI+ I EA Q+FD M K
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 468 NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIF 527
+ V++NT+I G+ + +KLF+EM G+ + VT+ +++ AG V + +E F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 528 HDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL---EFIRTMPVEPGPAVWGTLL-GACK 583
M + + I P + ++ L G+LEKAL E ++ ++ + T++ G CK
Sbjct: 389 SQM-DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 584 IHKNTDI-ARVASERLFELDPGSVGYYVLLSNIYSVG 619
K + + S L L P V Y ++S + + G
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 184/452 (40%), Gaps = 56/452 (12%)
Query: 162 PERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGM 221
P V +N +++ +V+ YD I + + M G++ D T V+ ++ + +
Sbjct: 81 PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 222 GIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGM---IG-KPDLIAYNAMISGY 277
I K G+ D + LV+ + + +S A L IG KPD++AYNA+I
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 278 TCNGEIESSVKLFRELLVSGQRVSSSTMVGLI-------------PVSSPFGHLHLTCSI 324
+ + F+E+ G R + T L+ + S +T ++
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 325 QGYC------VKSGAISNS----------SVSTALTTIYSRLN------EIDMARKLFDE 362
Y VK+G + + S+ + T S +N ID A ++FD
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 363 SPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS 418
K V ++N +I+G+ + E + LF+EM N VT T + Q G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 419 LSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNT 474
+ + + + P+I+ L+ G + +A +F+ M ++ + VT+ T
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 475 IIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKY 534
+I G G EA LF + G+ P VT+ +++ GL+ E E ++ K
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY----TKM 496
Query: 535 RIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
+ E L ++ + D G + + E I+ M
Sbjct: 497 KQEGLMKNDCTLSD-----GDITLSAELIKKM 523
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 140/343 (40%), Gaps = 35/343 (10%)
Query: 3 QRNSIITFINKACNLPHLAQ---IHAQLILNGYQSDLASITKLTQKLFDFGATRHARALF 59
R +I + +N C ++ + +++ GY+ D+ + + L A F
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 60 FSVRN----PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPD 115
+ P++ + LV G N+S S A ++ + P+ TY+ + A
Sbjct: 214 KEIERKGIRPNVVTYTALVNGL-CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV- 271
Query: 116 DKYGMLLHAHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DT 166
K G +L A + + ++ SSL++ R+ A ++FD M + D
Sbjct: 272 -KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 167 VAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPA------VAELQELGVG 220
V++NT+I G + +D +++FR+M G+ ++ T T++ V + QE
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 221 MGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGKP----DLIAYNAMISG 276
M FG D + L+ G++ A ++F + K D++ Y +I G
Sbjct: 391 MDF------FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 277 YTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 319
G++E + LF L + G + T ++ G LH
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 164/390 (42%), Gaps = 51/390 (13%)
Query: 130 GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWNTVITGLVRNCYYDDS 185
GF +L +SL++ Y ++R+ A +FD++ + + V + T+I L +N + + +
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
+++F M NG + + T ++ + E+ G + K + T L+
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 246 YSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
+ K G + A+ L+ ++ + PD+ Y ++I+G G ++ + ++F +
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM-------- 319
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
++G N + T L + + ++ K+F
Sbjct: 320 ---------------------------ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 362 ESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
E +K V A + +I GY G + A +F +M + P+ T L G
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWN 473
+ + + ++ + ++ NI T +I K G + +A LF S+ K N +T+
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPS 503
T+I G+ G HEA LFK+M G P+
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 141/312 (45%), Gaps = 22/312 (7%)
Query: 326 GYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE----SPEKTVAAWNAMISGYTQN 381
G +K G + T+L Y N I+ A LFD+ + V + +I +N
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 382 GLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVS 441
A+ LF +M T PN VT ++ ++G W+ + + + +EPN+
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 442 TALIDMYAKCGNISEARQLFDSMSE----KNTVTWNTIIFGYGLHGYGHEALKLFKEMLH 497
TALID + K G + EA++L++ M + + T+ ++I G ++G EA ++F M
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 498 SGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHA-----CMVDILGR 552
+G +P+ V + ++++ + V +G +IF++M K + + C+V GR
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV---GR 378
Query: 553 AGQLEKALEFIRTMPVEPGPAVWGTLL-GAC---KIHKNTDIARVASERLFELDPGSVGY 608
++ + + P + LL G C K+ K I +R E+D V Y
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR--EMDINIVTY 436
Query: 609 YVLLSNIYSVGR 620
+++ + +G+
Sbjct: 437 TIIIQGMCKLGK 448
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 139/353 (39%), Gaps = 16/353 (4%)
Query: 192 MVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGD 251
M+ G + D T ++L + + + GF + T L+ K
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 252 ISTARLLFGMIG----KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVG 307
++ A LF +G +P+++ YNA+++G G + L R+++ + T
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 308 LIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLF------D 361
LI G L + ++ + +L +D AR++F
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 362 ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSF 421
P + + + +I G+ ++ E + +F EM N +T T + +G
Sbjct: 324 CYPNEVI--YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 422 GKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIF 477
+ V + S+ P+I L+D G + +A +F+ M ++ N VT+ II
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 478 GYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDM 530
G G +A LF + G+ P+ +T+ +++ GL+ E + +F M
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 159/397 (40%), Gaps = 13/397 (3%)
Query: 182 YDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTG 241
YD I +F M G+ T V+ V + K GF D T
Sbjct: 99 YDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTS 158
Query: 242 LVSLYSKCGDISTARLLF----GMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG 297
L++ Y I A LF GM KP+++ Y +I N + +V+LF ++ +G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 298 QRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMAR 357
R + T L+ G + +K N TAL + ++ ++ A+
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 358 KLFD----ESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSAC 413
+L++ S V + ++I+G GL + A +F M PN V TT +
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 414 AQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NT 469
+ + G + + K + N T LI Y G A+++F+ MS + +
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 470 VTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHD 529
T+N ++ G +G +AL +F+ M + + VT+ I+ G V + ++F
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458
Query: 530 MVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
+ +K ++P + M+ R G + +A + M
Sbjct: 459 LFSK-GMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 155/387 (40%), Gaps = 47/387 (12%)
Query: 31 GYQSDLASITKLTQKLFDFGATRHARALFFSVR----NPDIFLFNVLVKGFSVNASPSSS 86
G++ DL + T L + A ALF + P++ + L++ N + +
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 87 IALYTHLRLRTNLAPDNYTY-AFTIAASPDDKYG--MLLHAHAIVDGFGSNLFVCSSLVD 143
+ L+ + + P+ TY A ++G L + N+ ++L+D
Sbjct: 208 VELFNQMGTNGS-RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 144 LYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQV 199
+ K ++ A+++++ M + D + ++I GL D++ Q+F M NG
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 200 DSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLF 259
+ T++ + + + GM I + G + T L+ Y G A+ +F
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 260 GMI----GKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPF 315
+ PD+ YN ++ G CNG++E ++ +F + ++ T
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT----------- 435
Query: 316 GHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMI 375
T IQG C K G + ++ D+ LF + + V + MI
Sbjct: 436 ----YTIIIQGMC-KLGKVEDA---------------FDLFCSLFSKGMKPNVITYTTMI 475
Query: 376 SGYTQNGLTETALSLFQEMMTTEFTPN 402
SG+ + GL A SLF++M F PN
Sbjct: 476 SGFCRRGLIHEADSLFKKMKEDGFLPN 502
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 202/464 (43%), Gaps = 24/464 (5%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGML 121
P+ F+VL++ F N ++ Y + + L P + I + +
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEV-LGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLV 177
L + G +N+FVC++++ K + A ++ +M R + V++N V+ G
Sbjct: 431 LFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAY 237
R D + VF +++ G++ ++ T ++ + + + +
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 238 VLTGLVSLYSKCGDISTAR-LLFGMIGKPDL----IAYNAMISGYTCNGEIESSVKLFRE 292
V +++ K G S AR LL MI + L ++YN++I G+ GE++S+V + E
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
+ +G + T L+ + ++ G + AL + + +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 353 IDMARKLFDESPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITT 408
++ A LF E E+ + +N++ISG+ G AL L+++M+ + T TT
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 409 TLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEKN 468
+ + G+L ++ +++ L P+ + T +++ +K G + ++F+ M +KN
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM-KKN 788
Query: 469 TVT-----WNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
VT +N +I G+ G EA +L EML GI P G TF
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 161/371 (43%), Gaps = 19/371 (5%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGML 121
P++ +N ++ G + + +++++ L L P+NYTY+ I + D++ +
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNI-LEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTV-----AWNTVITGL 176
+ H N V ++++ K + AR++ M E + ++N++I G
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+ D ++ + +M NG+ + T +++ + + + + ++ G D
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRE 292
L+ + K ++ +A LF + + P YN++ISG+ G + +++ L+++
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 293 LLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNE 352
+L G R T LI G+L L + G + + + T + S+ +
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 353 IDMARKLFDESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITT 408
K+F+E + V +NA+I+G+ + G + A L EM+ P+ T
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834
Query: 409 TLSACAQLGSL 419
+S Q+G+L
Sbjct: 835 LVS--GQVGNL 843
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 195/487 (40%), Gaps = 125/487 (25%)
Query: 102 DNYTYAFTIAAS-PDDKYGMLLH--AHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVF 158
DN T + AS ++K L + AI G + + S V K + +A +
Sbjct: 232 DNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLL 291
Query: 159 DEMPERDTVA-----WNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAE 213
EM E+ + +VI V+ DD+I++ +M+++G+ S VV
Sbjct: 292 REMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGI---SMNVVAA------ 342
Query: 214 LQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIA 269
T L++ + K D+ +A +LF + K P+ +
Sbjct: 343 --------------------------TSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVT 376
Query: 270 YNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCV 329
++ +I + NGE+E +++ ++++ V +GL P S F H+H IQG+
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKMEV----------LGLTP--SVF-HVHTI--IQGWL- 420
Query: 330 KSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVA---AWNAMISGYTQNGLTET 386
+ + + A KLFDES E +A N ++S + G T+
Sbjct: 421 -------------------KGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDE 461
Query: 387 ALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALID 446
A L +M + PN V+ + + ++ + V I K L+PN Y + LID
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521
Query: 447 ----------------------------MYA-------KCGNISEARQLFDSMSEK---- 467
+Y K G S+AR+L +M E+
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581
Query: 468 -NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEI 526
+ +++N+II G+ G A+ ++EM +GI P+ +T+ S++ + + E+
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641
Query: 527 FHDMVNK 533
+M NK
Sbjct: 642 RDEMKNK 648
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/470 (19%), Positives = 185/470 (39%), Gaps = 73/470 (15%)
Query: 130 GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERDTVAW----NTVITGLVRNCYYDDS 185
GF N + L++ Y K + A + ++M E D + + N ++ LV+ ++
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
+++ MVA GV D+ T ++ A ++ + + A + G D+ + + V
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 246 YSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTM 305
K D++ A L + + ++L V Q +S +
Sbjct: 278 CCKTLDLAMANSLLREMKE--------------------------KKLCVPSQETYTSVI 311
Query: 306 VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPE 365
+ VK G + ++ I + ++ +
Sbjct: 312 LA--------------------SVKQGNMDDA---------------IRLKDEMLSDGIS 336
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWV 425
V A ++I+G+ +N +AL LF +M +PN VT + + + G +
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEF 396
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE---KNTVTWNTIIFGYGLH 482
++ ++ L P+++ +I + K EA +LFD E N NTI+
Sbjct: 397 YKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQ 456
Query: 483 GYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEH 542
G EA +L +M GI P+ V++ +++ + +F +++ K ++P
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK-GLKPNNYT 515
Query: 543 HACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLL-GACKIHKNT 588
++ ++D R + ALE + M +E V+ T++ G CK+ + +
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 191/453 (42%), Gaps = 28/453 (6%)
Query: 134 NLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVF 189
++ C++L+ + + + A K+ + + D + +N +I+G + ++++ V
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 190 RDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAY--VLTGLVSLYS 247
M V D T T+L ++ + +L M + RD Y V+T + + +
Sbjct: 196 DRM---SVSPDVVTYNTILRSLCDSGKLKQAMEV----LDRMLQRDCYPDVITYTILIEA 248
Query: 248 KCGDISTA---RLLFGMIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
C D +LL M + PD++ YN +++G G ++ ++K ++ SG + +
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRL----NEIDMAR 357
T ++ G + ++ G + L R ID+
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 358 KLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLG 417
K+ + ++N ++ G+ + + A+ + M++ P+ VT T L+A + G
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 418 SLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWN 473
+ + + SK P + +ID AK G +A +L D M K +T+T++
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 474 TIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
+++ G G EA+K F E GI P+ VTF SI+ + + M+N+
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 534 YRIEPLAEHHACMVDILGRAGQLEKALEFIRTM 566
+P + +++ L G ++ALE + +
Sbjct: 549 -GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 165/373 (44%), Gaps = 21/373 (5%)
Query: 235 DAYVLTGLVSLYSKCGDISTA----RLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLF 290
D T L+ + + G A +L G PD+I YN MISGY GEI +++ +
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 291 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRL 350
+ VS V+ +T++ + S G L + ++ + T L R
Sbjct: 196 DRMSVSPDVVTYNTILRSLCDS---GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 351 NEIDMARKLFDESPEK----TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTI 406
+ + A KL DE ++ V +N +++G + G + A+ +M ++ PN +T
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 407 TTTL-SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS 465
L S C+ + K + +++ K P++ LI+ + G + A + + M
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLR-KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 466 ----EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
+ N++++N ++ G+ A++ + M+ G +P VT+ ++L A G V
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 522 EGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFI---RTMPVEPGPAVWGTL 578
+ EI + + +K P+ + ++D L +AG+ KA++ + R ++P + +L
Sbjct: 432 DAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 579 LGACKIHKNTDIA 591
+G D A
Sbjct: 491 VGGLSREGKVDEA 503
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/530 (17%), Positives = 210/530 (39%), Gaps = 95/530 (17%)
Query: 26 QLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN----PDIFLFNVLVKGFSVNA 81
++ +G D+ T L + G TR A + + PD+ +NV++ G+
Sbjct: 127 NMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG 186
Query: 82 SPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIVDGFGS-----NLF 136
++++++ R +++PD TY + + D G L A ++D ++
Sbjct: 187 EINNALSVLD----RMSVSPDVVTYNTILRSLCDS--GKLKQAMEVLDRMLQRDCYPDVI 240
Query: 137 VCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDDSIQVFRDM 192
+ L++ + S VG A K+ DEM +R D V +N ++ G+ + D++I+ DM
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 193 VANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSLYSKCGDI 252
++G Q + T +L ++ + + GF L++ + G +
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 253 STARLLFGMIG----KPDLIAYNAMISGYTCNGEIESSVKLFRELLVSG---QRVSSSTM 305
A + + +P+ ++YN ++ G+ +++ +++ ++ G V+ +TM
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 306 VGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPE 365
+ + K G + ++ +++ +L +
Sbjct: 421 LTAL-------------------CKDGKVEDA---------------VEILNQLSSKGCS 446
Query: 366 KTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KW 424
+ +N +I G + G T A+ L EM + P+ +T ++ + ++ G + K+
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 425 VHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHG 483
H+ F+ M N VT+N+I+ G
Sbjct: 507 FHE---------------------------------FERMGIRPNAVTFNSIMLGLCKSR 533
Query: 484 YGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNK 533
A+ M++ G P+ ++ ++ ++ G+ +E E+ +++ NK
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 372 NAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKS 431
N + + G E + M+ P+ + TT + +LG + ++++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 432 KNLEPNIYVSTALIDMYAKCGNISEARQLFDSMS-EKNTVTWNTIIFGYGLHGYGHEALK 490
P++ +I Y K G I+ A + D MS + VT+NTI+ G +A++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 491 LFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDIL 550
+ ML +P +T+ ++ A V ++ +M ++ P + +V+ +
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR-GCTPDVVTYNVLVNGI 284
Query: 551 GRAGQLEKALEFIRTMP 567
+ G+L++A++F+ MP
Sbjct: 285 CKEGRLDEAIKFLNDMP 301
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 135/323 (41%), Gaps = 20/323 (6%)
Query: 5 NSIITFINKACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFGATRHARALFFSVRN 64
N+I+ + + L ++ +++ D+ + T L + HA L +R+
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 65 ----PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGM 120
PD+ +NVLV G +I + + P+ T+ + + M
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP-SSGCQPNVITHNIILRSMCSTGRWM 326
Query: 121 ---LLHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVI 173
L A + GF ++ + L++ + +G A + ++MP+ +++++N ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 174 TGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFH 233
G + D +I+ MV+ G D T T+L A+ + ++ + I G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 234 RDAYVLTGLVSLYSKCGDISTA-RLLFGMIGK---PDLIAYNAMISGYTCNGEIESSVKL 289
++ +K G A +LL M K PD I Y++++ G + G+++ ++K
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 290 FRELLVSGQRVSS----STMVGL 308
F E G R ++ S M+GL
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGL 529
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 155/364 (42%), Gaps = 12/364 (3%)
Query: 181 YYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLT 240
+ D+IQ FR + V +L + +L G G GF + YV
Sbjct: 185 FIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFN 244
Query: 241 GLVSLYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
L++ + K G+IS A+ +F I K P ++++N +I+GY G ++ +L ++ S
Sbjct: 245 ILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKS 304
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMA 356
R T LI + + K G I N + T L +SR EID+
Sbjct: 305 RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLM 364
Query: 357 R----KLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSA 412
+ K+ + + + +N +++G+ +NG A ++ M+ P+ +T TT +
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDG 424
Query: 413 CAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA----RQLFDSMSEKN 468
+ G + + + + +E + +AL+ K G + +A R++ + + +
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 469 TVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
VT+ ++ + G KL KEM G PS VT+ +L G ++ + +
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 529 DMVN 532
M+N
Sbjct: 545 AMLN 548
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 160/372 (43%), Gaps = 56/372 (15%)
Query: 271 NAMISGYTCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGY--- 327
+A++ YT G I +++ FR +S + + G + L+ T +I G+
Sbjct: 174 DALMITYTDLGFIPDAIQCFR---LSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 328 CVKSGAISNSSVSTALTTIYSRLNEIDMARKLFDE----SPEKTVAAWNAMISGYTQNG- 382
+ +G N V L + + I A+K+FDE S + TV ++N +I+GY + G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 383 --------------------LTETAL--------------SLFQEMMTTEFTPNPVTITT 408
T +AL LF EM PN V TT
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 409 TLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK- 467
+ ++ G + K +Q + SK L+P+I + L++ + K G++ AR + D M +
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 468 ---NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGE 524
+ +T+ T+I G+ G AL++ KEM +GI V F +++ G V + E
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 525 EIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKALEFIRTMPVE---PGPAVWGTLL-G 580
+M+ + I+P + M+D + G + + ++ M + P + LL G
Sbjct: 471 RALREML-RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 581 ACKI--HKNTDI 590
CK+ KN D+
Sbjct: 530 LCKLGQMKNADM 541
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 161/367 (43%), Gaps = 45/367 (12%)
Query: 130 GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPERD----TVAWNTVITGLVRNCYYDDS 185
GF N++V + L++ + K + A+KVFDE+ +R V++NT+I G + D+
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 186 IQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVSL 245
++ M + + D T ++ A+ + ++ G+ K G + + T L+
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 246 YSKCGDISTARLLF-GMIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRVS 301
+S+ G+I + + M+ K PD++ YN +++G+ NG++ ++ + ++ G R
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 302 SSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEIDMARKLFD 361
T LI G+C V TAL EI RK D
Sbjct: 415 KITYTTLI---------------DGFC------RGGDVETAL--------EI---RKEMD 442
Query: 362 ESP-EKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLS 420
++ E ++A++ G + G A +EM+ P+ VT T + A + G
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQ 502
Query: 421 FGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSE----KNTVTWNTII 476
G + + ++S P++ L++ K G + A L D+M + +T+NT++
Sbjct: 503 TGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Query: 477 FGYGLHG 483
G+ H
Sbjct: 563 EGHHRHA 569
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 367 TVAAWNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWV 425
V +N +++ + + G A +F E+ P V+ T ++ ++G+L G +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 426 HQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK----NTVTWNTIIFGYGL 481
HQ+ KS+ P+++ +ALI+ K + A LFD M ++ N V + T+I G+
Sbjct: 299 HQMEKSRT-RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 482 HGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAE 541
+G + +++ML G+ P V + +++ G + I M+ + + P
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR-GLRPDKI 416
Query: 542 HHACMVDILGRAGQLEKALEFIRTMP---VEPGPAVWGTLL-GACKIHKNTDIARVASER 597
+ ++D R G +E ALE + M +E + L+ G CK + D R E
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 598 LFE-LDPGSVGYYVLLS 613
L + P V Y +++
Sbjct: 477 LRAGIKPDDVTYTMMMD 493
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 14/261 (5%)
Query: 384 TETALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTA 443
T T + E++ F N ++ + G++S + V I ++L+P +
Sbjct: 221 TGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNT 280
Query: 444 LIDMYAKCGNISEA----RQLFDSMSEKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSG 499
LI+ Y K GN+ E Q+ S + + T++ +I A LF EM G
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 500 IHPSGVTFLSILYACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKA 559
+ P+ V F ++++ S G + +E + M++K ++P + +V+ + G L A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK-GLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 560 LEFIRTM---PVEPGPAVWGTLL-GACK---IHKNTDIARVASERLFELDPGSVGYYVLL 612
+ M + P + TL+ G C+ + +I + + ELD VG+ L+
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD--RVGFSALV 457
Query: 613 SNIYSVGRNFPKAASIREVAK 633
+ GR ++RE+ +
Sbjct: 458 CGMCKEGRVIDAERALREMLR 478
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 185/426 (43%), Gaps = 55/426 (12%)
Query: 163 ERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG 222
E D+V +N + G + +V RDM+ G+ D T +L +L + +G+
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 223 IQCLAFKFGFHRDAYV-LTGLVSLYSKCGDISTARLLFGMIG----KPDLIAYNAMISGY 277
+ GF ++ + + ++S K G I A LF + PDL+AY+ +I G
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 278 TCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNS 337
G+ + ++ L+ E+ +R+ +P S G L L +G +++ ++ +S
Sbjct: 409 CKLGKFDMALWLYDEM--CDKRI--------LPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Query: 338 SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT 397
+S+ T + +N +I GY ++G E AL LF+ ++ T
Sbjct: 459 LISSGETL---------------------DIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 398 EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
TP+ T + + + +++ + + +IK L P++ T L+D YA CGN
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 458 RQLFDSMSEKNTVTWN---TIIFGYGLHGYGHEAL------KLF-------KEMLHSGIH 501
+L M + N ++IF G+ HE ++F ++M GI
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 502 PSGVTFLSIL-YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL 560
P +T+ +I+ Y C L G +F +++ ++ + + ++D L G + KA
Sbjct: 618 PDQITYNTIIQYLCRVKHL--SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 675
Query: 561 EFIRTM 566
FI ++
Sbjct: 676 SFIYSL 681
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 196/476 (41%), Gaps = 78/476 (16%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYGML 121
PD +N+L KGF + S + + + L L+PD TY + + G++
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDM-LDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 122 LHAHAIVDGFGSNLFV-CSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGL 176
L + GF N + CS ++ K R+ A +F++M D VA++ VI GL
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+ +D ++ ++ +M + +S T +L + + GM ++ +
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ-----KGMLLEARSL-------- 455
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
L SL IS+ L D++ YN +I GY +G IE +++LF+ ++ +
Sbjct: 456 -----LDSL------ISSGETL-------DIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYC--------VKSGAISNSSVS-TALTTIY 347
G S +T LI +G+ C Q +K ++ S VS T L Y
Sbjct: 498 GITPSVATFNSLI-----YGY----CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 348 SRLNEI----DMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQE---------- 393
+ ++ R++ E T ++ + G + E + +E
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 608
Query: 394 --MMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKC 451
M + P+ +T T + ++ LS +++KS+NL+ + LID
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668
Query: 452 GNISEARQLFDSMSEKNT----VTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPS 503
G I +A S+ E+N + T+I + + G A+KLF ++LH G + S
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 122/270 (45%), Gaps = 11/270 (4%)
Query: 327 YCVKSGAISNSSVST-ALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTE 385
Y +K N +VST + ++ E D ++ E +K ++ ++ G + E
Sbjct: 145 YILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLE 204
Query: 386 TALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI 445
A+ + + P+ V+ + +S +LG + K + L P++Y LI
Sbjct: 205 DAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILI 264
Query: 446 DMYAKCGNISEARQLFDSMS----EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIH 501
+ G+I+EA +L M+ E ++VT+N + G+ L G A ++ ++ML G+
Sbjct: 265 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 324
Query: 502 PSGVTFLSILYACSHAGLVREGEEIFHDMVNK-YRIEPLAEHHACMVDILGRAGQLEKAL 560
P +T+ +L G + G + DM+++ + + + + M+ L + G++++AL
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP-CSVMLSGLCKTGRIDEAL 383
Query: 561 EFIRTMPVE---PGPAVWGTLL-GACKIHK 586
M + P + ++ G CK+ K
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 185/426 (43%), Gaps = 55/426 (12%)
Query: 163 ERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMG 222
E D+V +N + G + +V RDM+ G+ D T +L +L + +G+
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 223 IQCLAFKFGFHRDAYV-LTGLVSLYSKCGDISTARLLFGMIG----KPDLIAYNAMISGY 277
+ GF ++ + + ++S K G I A LF + PDL+AY+ +I G
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 278 TCNGEIESSVKLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNS 337
G+ + ++ L+ E+ +R+ +P S G L L +G +++ ++ +S
Sbjct: 409 CKLGKFDMALWLYDEM--CDKRI--------LPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Query: 338 SVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTT 397
+S+ T + +N +I GY ++G E AL LF+ ++ T
Sbjct: 459 LISSGETL---------------------DIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 398 EFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEA 457
TP+ T + + + +++ + + +IK L P++ T L+D YA CGN
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 458 RQLFDSMSEKNTVTWN---TIIFGYGLHGYGHEAL------KLF-------KEMLHSGIH 501
+L M + N ++IF G+ HE ++F ++M GI
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 502 PSGVTFLSIL-YACSHAGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL 560
P +T+ +I+ Y C L G +F +++ ++ + + ++D L G + KA
Sbjct: 618 PDQITYNTIIQYLCRVKHL--SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 675
Query: 561 EFIRTM 566
FI ++
Sbjct: 676 SFIYSL 681
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 195/482 (40%), Gaps = 90/482 (18%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAAS---PDDKYGML 121
PD +N+L KGF + S + + + L L+PD TY + + G++
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDM-LDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 122 LHAHAIVDGFGSNLFV-CSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGL 176
L + GF N + CS ++ K R+ A +F++M D VA++ VI GL
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 177 VRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDA 236
+ +D ++ ++ +M + +S T +L + + GM ++ +
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ-----KGMLLEARSL-------- 455
Query: 237 YVLTGLVSLYSKCGDISTARLLFGMIGKPDLIAYNAMISGYTCNGEIESSVKLFRELLVS 296
L SL IS+ L D++ YN +I GY +G IE +++LF+ ++ +
Sbjct: 456 -----LDSL------ISSGETL-------DIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 297 GQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYC--------------VKSGAISNSSVS-T 341
G + P + F L I GYC +K ++ S VS T
Sbjct: 498 G----------ITPSVATFNSL-----IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 542
Query: 342 ALTTIYSRLNEI----DMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQE---- 393
L Y+ ++ R++ E T ++ + G + E + +E
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 394 --------MMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI 445
M + P+ +T T + ++ LS +++KS+NL+ + LI
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Query: 446 DMYAKCGNISEARQLFDSMSEKNT----VTWNTIIFGYGLHGYGHEALKLFKEMLHSGIH 501
D G I +A S+ E+N + T+I + + G A+KLF ++LH G +
Sbjct: 663 DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722
Query: 502 PS 503
S
Sbjct: 723 VS 724
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 122/270 (45%), Gaps = 11/270 (4%)
Query: 327 YCVKSGAISNSSVST-ALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTE 385
Y +K N +VST + ++ E D ++ E +K ++ ++ G + E
Sbjct: 145 YILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLE 204
Query: 386 TALSLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALI 445
A+ + + P+ V+ + +S +LG + K + L P++Y LI
Sbjct: 205 DAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILI 264
Query: 446 DMYAKCGNISEARQLFDSMS----EKNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIH 501
+ G+I+EA +L M+ E ++VT+N + G+ L G A ++ ++ML G+
Sbjct: 265 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 324
Query: 502 PSGVTFLSILYACSHAGLVREGEEIFHDMVNK-YRIEPLAEHHACMVDILGRAGQLEKAL 560
P +T+ +L G + G + DM+++ + + + + M+ L + G++++AL
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP-CSVMLSGLCKTGRIDEAL 383
Query: 561 EFIRTMPVE---PGPAVWGTLL-GACKIHK 586
M + P + ++ G CK+ K
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/516 (20%), Positives = 214/516 (41%), Gaps = 58/516 (11%)
Query: 158 FDEMPERDTVAWNTVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQEL 217
F +R+ + +GLV + DD+I +FRDM+ + + A+A+ ++
Sbjct: 46 FSAFSDRNLSYRERLRSGLV-DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104
Query: 218 GVGMGIQCLAFKF-GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK----PDLIAYNA 272
+ + + C + G + Y L+ +++ + +C + A G I K P+ I ++
Sbjct: 105 DLVLAL-CKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFST 163
Query: 273 MISGYTCNGEIESSVKLFRELLVSGQR---VSSSTMV-GLIPVSSPFGHLHLTCSIQGYC 328
+I+G G + +++L ++ G + ++ +T+V GL + L + Y
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 329 VKSGAISNSSVSTALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETAL 388
+ A++ V + +++ RK+ + + + ++ +I G ++G + A
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 389 SLFQEMMTTEFTPNPVTITTTLSACAQLGSLSFG-KWVHQLIKSKNLEPNIYVSTALIDM 447
+LF EM T N +T + G G K + +IK K + PN+ + LID
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK-INPNVVTFSVLIDS 342
Query: 448 YAKCGNISEARQLFDSM---------------------------------------SEKN 468
+ K G + EA +L M + N
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 469 TVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVREGEEIFH 528
T+N +I GY + L+LF++M G+ VT+ +++ G + +E+F
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 529 DMVNKYRIEPLAEHHACMVDILGRAGQLEKALEF---IRTMPVEPGPAVWGTLL-GACKI 584
+MV++ ++ P + ++D L G+ EKALE I +E ++ ++ G C
Sbjct: 463 EMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 585 HKNTDIARV-ASERLFELDPGSVGYYVLLSNIYSVG 619
K D + S L + PG Y +++ + G
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 182/461 (39%), Gaps = 53/461 (11%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAA---SPDDKYGML 121
P+ F+ L+ G + S ++ L + + PD T + S + ML
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRM-VEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 122 LHAHAIVDGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLV 177
L + G N ++++ K + LA ++ +M ER D V ++ +I GL
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 178 RNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAY 237
++ D++ +F +M G+ +T ++T + +G C A ++
Sbjct: 275 KHGSLDNAFNLFNEMEMKGI---TTNIITY----------NILIGGFCNAGRWD------ 315
Query: 238 VLTGLVSLYSKCGDISTARLLFGMIGK---PDLIAYNAMISGYTCNGEIESSVKLFRELL 294
A+LL MI + P+++ ++ +I + G++ + +L +E++
Sbjct: 316 ---------------DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 295 VSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIYSRLNEID 354
G + T LI HL + V G N L Y + N ID
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 355 MARKLFDESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPNPVTITTTL 410
+LF + + V A +N +I G+ + G A LFQEM++ + PN VT L
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 411 SACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQLFDSMSEK--- 467
G + + I+ +E +I + +I + +A LF S+ K
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 468 -NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTF 507
T+N +I G G EA LF++M G P G T+
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 121/313 (38%), Gaps = 45/313 (14%)
Query: 13 KACNLPHLAQIHAQLILNGYQSDLASITKLTQKLFDFG----ATRHARALFFSVRNPDIF 68
K L ++H ++I G D + T L A + + +P+I
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 69 LFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLHAHAIV 128
FN+L+ G+ + L+ + LR +A D TY
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVA-DTVTY---------------------- 441
Query: 129 DGFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMPER----DTVAWNTVITGLVRNCYYDD 184
++L+ + + ++ +A+++F EM R + V + ++ GL N +
Sbjct: 442 ----------NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 185 SIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKFGFHRDAYVLTGLVS 244
++++F + + +++D ++ + ++ + C G ++
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 245 LYSKCGDISTARLLFGMIGK----PDLIAYNAMISGYTCNGEIESSVKLFRELLVSGQRV 300
K G +S A LLF + + PD YN +I + +G+ SVKL EL G V
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSV 611
Query: 301 SSSTMVGLIPVSS 313
+ST+ +I + S
Sbjct: 612 DASTIKMVIDMLS 624
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 174/374 (46%), Gaps = 17/374 (4%)
Query: 229 KFGFHRDAYVLTGLVSLYSKCGDISTARLLFG----MIGKPDLIAYNAMISGYTCNGEIE 284
K G+ D L L++ + IS A L M KPD + + +I G + +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 285 SSVKLFRELLVSGQR---VSSSTMV-GLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVS 340
+V L ++ G + V+ +V GL L+L ++ +++ + S+V
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 341 TALTTIYSRLNEIDMARKLFDESPEKTVAAWNAMISGYTQNGLTETALSLFQEMMTTEFT 400
+L + +++ ++ ++ V ++++IS G A L +M+ +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 401 PNPVTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCGNISEARQL 460
PN VT + + A + G L + +++ + ++++PNI+ ++LI+ + + EA+Q+
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 461 FDSMSEK----NTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSH 516
+ M K N VT+NT+I G+ + ++LF+EM G+ + VT+ ++++
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 517 AGLVREGEEIFHDMVNKYRIEPLAEHHACMVDILGRAGQLEKAL---EFIRTMPVEPGPA 573
A + +F MV+ + P + ++D L + G+L KA+ E+++ +EP
Sbjct: 441 ARDCDNAQMVFKQMVS-VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Query: 574 VWGTLL-GACKIHK 586
+ ++ G CK K
Sbjct: 500 TYNIMIEGMCKAGK 513
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 164/409 (40%), Gaps = 63/409 (15%)
Query: 65 PDIFLFNVLVKGFSVNASPSSSIALYTHLRLRTNLAPDNYTYAFTIAASPDDKYGMLLH- 123
PDI N L+ GF S ++AL + + PD T+ I +G+ LH
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQM-VEMGYKPDTVTFTTLI-------HGLFLHN 197
Query: 124 ----AHAIVD-----GFGSNLFVCSSLVDLYFKFSRVGLARKVFDEMP----ERDTVAWN 170
A A++D G +L ++V+ K LA + ++M E + V ++
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 171 TVITGLVRNCYYDDSIQVFRDMVANGVQVDSTTVVTVLPAVAELQELGVGMGIQCLAFKF 230
TVI L + + DD++ +F +M GV+ P V L I CL +
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVR----------PNVITYSSL-----ISCLC-NY 301
Query: 231 GFHRDAYVLTGLVSLYSKCGDISTARLLFGMIGK---PDLIAYNAMISGYTCNGEIESSV 287
G DA +RLL MI + P+L+ ++A+I + G++ +
Sbjct: 302 GRWSDA------------------SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 288 KLFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLTCSIQGYCVKSGAISNSSVSTALTTIY 347
KL+ E++ + T LI L + ++ + N L +
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 348 SRLNEIDMARKLFDESPEKTVAA----WNAMISGYTQNGLTETALSLFQEMMTTEFTPNP 403
+ +D +LF E ++ + + +I G+ Q + A +F++M++ PN
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 463
Query: 404 VTITTTLSACAQLGSLSFGKWVHQLIKSKNLEPNIYVSTALIDMYAKCG 452
+T L + G L+ V + ++ +EP+IY +I+ K G
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 62/305 (20%)
Query: 385 ETALSLFQEMMTTEFTPNPVTITTTLSACAQLGS----LSFGKWVHQLIKSKNLEPNIYV 440
+ A+ LF M + P+ + + LSA A++ +SFG+ + L + N+Y
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEIL----GISHNLYT 115
Query: 441 STALIDMYAKC----------------------------------GN-ISEARQLFDSMS 465
LI+ + +C GN IS+A L D M
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 466 E----KNTVTWNTIIFGYGLHGYGHEALKLFKEMLHSGIHPSGVTFLSILYACSHAGLVR 521
E +TVT+ T+I G LH EA+ L M+ G P VT+ +++ GL +
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV-----NGLCK 230
Query: 522 EGE-EIFHDMVNKY---RIEPLAEHHACMVDILGRAGQLEKALEFIRTMP---VEPGPAV 574
G+ ++ +++NK +IE ++ ++D L + + AL M V P
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 575 WGTLLGA-CKIHKNTDIARVASERL-FELDPGSVGYYVLLSNIYSVGRNFPKAASIREVA 632
+ +L+ C + +D +R+ S+ + +++P V + L+ G+ KA + E
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK-LVKAEKLYEEM 349
Query: 633 KKRKL 637
KR +
Sbjct: 350 IKRSI 354