Miyakogusa Predicted Gene

Lj4g3v1986770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1986770.1 Non Chatacterized Hit- tr|D7MVA0|D7MVA0_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,31.69,8e-19,no
description,NULL; PUTATIVE UNCHARACTERIZED PROTEIN,NULL; F-BOX/LEUCINE
RICH REPEAT PROTEIN,NULL;
,NODE_22856_length_1246_cov_301.341095.path2.1
         (305 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 | chr5...   365   e-101
AT4G30640.1 | Symbols:  | RNI-like superfamily protein | chr4:14...   298   3e-81
AT4G05460.1 | Symbols:  | RNI-like superfamily protein | chr4:27...    98   9e-21
AT4G05497.1 | Symbols:  | RNI-like superfamily protein | chr4:27...    90   2e-18
AT4G05475.1 | Symbols:  | RNI-like superfamily protein | chr4:27...    86   4e-17
AT4G05470.1 | Symbols:  | RNI-like superfamily protein | chr4:27...    84   9e-17
AT4G03630.1 | Symbols:  | RNI-like superfamily protein | chr4:16...    80   1e-15
AT4G08980.5 | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-...    75   4e-14
AT4G08980.4 | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-...    75   4e-14
AT4G08980.2 | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-...    75   4e-14
AT4G08980.3 | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-...    75   4e-14
AT4G08980.1 | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-...    75   4e-14
AT5G52480.1 | Symbols:  | RNI-like superfamily protein | chr5:21...    75   4e-14
AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein | c...    70   1e-12
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr...    69   3e-12
AT5G52480.2 | Symbols:  | RNI-like superfamily protein | chr5:21...    65   4e-11
AT4G05490.1 | Symbols:  | RNI-like superfamily protein | chr4:27...    63   3e-10
AT5G23340.1 | Symbols:  | RNI-like superfamily protein | chr5:78...    62   5e-10
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei...    62   5e-10
AT1G80630.1 | Symbols:  | RNI-like superfamily protein | chr1:30...    61   1e-09
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1...    60   2e-09
AT5G27920.1 | Symbols:  | F-box family protein | chr5:9942063-99...    55   4e-08
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch...    55   5e-08
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr...    55   5e-08
AT4G33210.1 | Symbols: SLOMO | F-box family protein | chr4:16015...    55   9e-08
AT3G58530.1 | Symbols:  | RNI-like superfamily protein | chr3:21...    54   1e-07
AT3G48880.2 | Symbols:  | RNI-like superfamily protein | chr3:18...    52   7e-07
AT3G48880.1 | Symbols:  | RNI-like superfamily protein | chr3:18...    52   7e-07
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting prote...    51   9e-07
AT5G01720.1 | Symbols:  | RNI-like superfamily protein | chr5:26...    51   1e-06
AT3G60350.1 | Symbols: ARABIDILLO-2, ARABIDILLO2 | ARABIDILLO-2 ...    50   3e-06
AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 | chr4:41978...    49   5e-06
AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 ...    48   7e-06
AT5G21900.1 | Symbols:  | RNI-like superfamily protein | chr5:72...    48   9e-06

>AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 |
           chr5:23449916-23450915 REVERSE LENGTH=300
          Length = 300

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/302 (58%), Positives = 228/302 (75%), Gaps = 6/302 (1%)

Query: 6   EEGSDSEWSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDS 65
           E+GSD  W  L  E LINI+SRLT+ +LW G M V KSW +  ++P L S+F+L+P FDS
Sbjct: 3   EDGSD--WGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDS 60

Query: 66  PRELPRWWSPEFEAKIDSMLRSVVQWTHIFLTQIRIRHCSDRSLALVAERCPNLEVLSIR 125
             E    WSPEFE K+D MLRSVV W+   LT+IR+RHCSD +L+  A+RCPNL+VL+IR
Sbjct: 61  YPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIR 120

Query: 126 SCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPS 185
           S P+VTD S+++IA  C  L+ELDISYC++++H +L +IGRNCPNL++LKRNLM+W   S
Sbjct: 121 SSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDW--SS 178

Query: 186 QHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFL 245
           +H+G VP EYL+ACPQDGDTEA AI + M +LE LEI+FS+LS KGL  IC+ CP LE+L
Sbjct: 179 RHIGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYL 238

Query: 246 DLSGCANLTSRDIANASSSLAHLKDIKKPNFYIPRS--VFHTERYGHWQLYDERFQTDVF 303
           DL GC +L+SRDI +  S L  LK++KKP+ Y+PRS  V  TERYGHW+LYDERF     
Sbjct: 239 DLFGCVHLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAM 298

Query: 304 RI 305
           RI
Sbjct: 299 RI 300


>AT4G30640.1 | Symbols:  | RNI-like superfamily protein |
           chr4:14952670-14953682 FORWARD LENGTH=301
          Length = 301

 Score =  298 bits (763), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 150/291 (51%), Positives = 205/291 (70%), Gaps = 2/291 (0%)

Query: 2   ENEVEEGSD--SEWSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNL 59
           E +VE GS    +WSELTRECL++I SRL+ +  W G MLV K+W +A  +P+L+++F+L
Sbjct: 7   EGKVEMGSGLYPDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDL 66

Query: 60  DPLFDSPRELPRWWSPEFEAKIDSMLRSVVQWTHIFLTQIRIRHCSDRSLALVAERCPNL 119
           +  F S  E   WW+PEFE K+DS LRSVV  +   LT+IRIRHC++RSL+  AERCPNL
Sbjct: 67  ETRFLSFPESINWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNL 126

Query: 120 EVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLM 179
           EVL I++CP+VTD S+ +IA+NCP LRELDISY Y +TH+SL  +GR+C NLK+LKRNL+
Sbjct: 127 EVLWIKNCPNVTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLL 186

Query: 180 NWLDPSQHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRC 239
             L PS    + P +YL   P+ G+ EA  I + M  L+ LEIR+S L+A+GL+ +C+ C
Sbjct: 187 PRLGPSLPTIVAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGC 246

Query: 240 PNLEFLDLSGCANLTSRDIANASSSLAHLKDIKKPNFYIPRSVFHTERYGH 290
            NLE++DL GC +LT  DI   +S L +L +I KP+F  P +V    R G+
Sbjct: 247 SNLEYMDLRGCISLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPRPGN 297


>AT4G05460.1 | Symbols:  | RNI-like superfamily protein |
           chr4:2761106-2762400 REVERSE LENGTH=302
          Length = 302

 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 113/252 (44%), Gaps = 33/252 (13%)

Query: 5   VEEGSDSEWSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFD 64
           +E G  + W+EL  E    IL RL   ++      VC+SW    K+PS+    ++  L D
Sbjct: 11  MEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGD 70

Query: 65  SPRELPRWWSPEFEAKIDSMLRSVVQWTHIFLTQIRIRHCSDRSL-ALVAERCPNLEVLS 123
                      + +  ++ M R  V  +   L  I I +     L   +A R  NL  L 
Sbjct: 71  LD---------DMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLR 121

Query: 124 IRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLD 183
           +  C  +TDD      V  P L EL++SYC   + +SL ++G+ C N+K LK        
Sbjct: 122 LIRCSQITDDGFVEAVVKLP-LEELELSYC-SFSVESLRVVGQCCLNMKTLK-------- 171

Query: 184 PSQHVGIVPDEYLNACPQ-DGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNL 242
                       LN  PQ + D +A AIA +MP L  L++  + LS  GLN I   C NL
Sbjct: 172 ------------LNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNL 219

Query: 243 EFLDLSGCANLT 254
           E LDL  C N+ 
Sbjct: 220 EHLDLRRCFNVN 231


>AT4G05497.1 | Symbols:  | RNI-like superfamily protein |
           chr4:2777903-2778801 REVERSE LENGTH=246
          Length = 246

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 115/257 (44%), Gaps = 37/257 (14%)

Query: 5   VEEGSDSEWSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNL---DP 61
           ++ G    W+EL  E   +IL RL   ++ +    VCKSW    ++PS+    ++   + 
Sbjct: 13  MKNGEYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKEN 72

Query: 62  LFDSPRELPRWWSPEFEAKIDSMLRSVVQWTHIFLTQIRIRHCSDRS-LALVAERCPNLE 120
           L +S          E    I+ +    V  +   L +I I +  + S L  +A+R  NL 
Sbjct: 73  LVNSV---------ELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLR 123

Query: 121 VLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMN 180
            L +  C  V    +   A+  P L ELDI+Y   +  + L ++G++CPNL+ LK N   
Sbjct: 124 RLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLN--- 180

Query: 181 WLDPSQHVGIVPDEYLNACPQD---GDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQ 237
                             C  D    D  A AIA +MP L  L++  + LS  GLN I +
Sbjct: 181 ------------------CTGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILE 222

Query: 238 RCPNLEFLDLSGCANLT 254
            CP+L+ L L  C N+ 
Sbjct: 223 GCPHLKNLGLHQCLNIN 239


>AT4G05475.1 | Symbols:  | RNI-like superfamily protein |
           chr4:2765962-2767957 REVERSE LENGTH=309
          Length = 309

 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 126/274 (45%), Gaps = 40/274 (14%)

Query: 13  WSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNL-DPLFDSPRELPR 71
           W +L  E   +IL RL+V D+      +C++W    K+PS+    NL D L         
Sbjct: 40  WVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRDCLM-------- 91

Query: 72  WWSPEFEAKIDSMLRSVVQWTHIFLTQIRIRH-CSDRSLALVAERCPNLEVLSIRSCPHV 130
                +E   +SM R +V  +   L +I I H  SD  L+ + +R  NL+ L I     +
Sbjct: 92  -----YEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPM 146

Query: 131 TDDSISRIAVNCPKLRELDISYCYDVTHKSLAL----IGRNCPNLKVLKRNLMN---WLD 183
           T+  +       P L  L I       H S+ L    IG  CP LK LK N +      D
Sbjct: 147 TNKGVMNGIEKLPLLETLVI------FHSSIKLDLKAIGHACPQLKTLKLNSLGSELAHD 200

Query: 184 PSQHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNL- 242
            SQ VG +P   L  C    D +A AIA SMP L  L++  + L+  GLN I   CP+L 
Sbjct: 201 ISQ-VGYIP---LLEC----DDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLE 252

Query: 243 EFLDLSGCANLTSRDIANASSS-LAHLKDIKKPN 275
           E LD+  C N+    + N     +  +K++++P+
Sbjct: 253 EHLDVRKCFNINL--VGNLEKRCMKRIKELRRPH 284


>AT4G05470.1 | Symbols:  | RNI-like superfamily protein |
           chr4:2763256-2765351 REVERSE LENGTH=304
          Length = 304

 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 125/271 (46%), Gaps = 31/271 (11%)

Query: 13  WSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNL-DPLFDSPRELPR 71
           W +L  E   +IL RL++ D+      VCK W    K+PS+    N  D L         
Sbjct: 46  WVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCLM-------- 97

Query: 72  WWSPEFEAKIDSMLRSVVQWTHIFLTQIRI--RHCSDRSLALVAERCPNLEVLSIRSC-P 128
                +     SM R +V  +   L +I +     SD  L+ + +R  NL  L +  C P
Sbjct: 98  -----YNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDR--NLRSLGLGMCFP 150

Query: 129 HVTDDSISRIAVNCPKLRELDISY-CYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPS-- 185
            VT   +       P L  L++++ C  +  K+   IG  CP LK LK N +  L P+  
Sbjct: 151 RVTKLGVVNAIAKIPLLETLEVTHSCIKLDLKA---IGHACPQLKTLKLNSLGRLWPASD 207

Query: 186 QHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFL 245
           ++   V D+     P + D +A AIA SMP L  L++  ++L+  GLN I   CP+LE L
Sbjct: 208 KYDSNVLDDM---GPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHL 264

Query: 246 DLSGCANLTSRDIANASSS-LAHLKDIKKPN 275
           D+  C  ++   + N     L  +K++++P 
Sbjct: 265 DVRKCFRISL--VGNLEKRCLEMIKELRRPG 293


>AT4G03630.1 | Symbols:  | RNI-like superfamily protein |
           chr4:1608750-1610037 FORWARD LENGTH=220
          Length = 220

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%)

Query: 80  KIDSMLRSVVQWTHIFLTQIRIRH-CSDRSLALVAERCPNLEVLSIRSCPHVTDDSISRI 138
           ++  M+   V  +     +I I H  +D  L  +A+R  NL  L +  C  +T   +   
Sbjct: 24  RLGRMMCHAVALSQGGCVEINIEHFGTDSLLTYIADRSSNLRHLGLAKCDQITGMGLFTE 83

Query: 139 AVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNA 198
           A+  P L +L++SYC  +  K+L  IG  C +LK LK N   +  P              
Sbjct: 84  AMKLPLLEDLELSYCL-IKGKNLEAIGFACLHLKTLKLNCQGFKFPGFTY---------- 132

Query: 199 CPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLSGCANLT-SRD 257
                D +A  IA+ MP L  L++  +++S  GLN I   CP+LE LDL  C N+    D
Sbjct: 133 -----DHDALGIAKRMPELRCLQLFGNRVSDVGLNAIFDGCPHLEHLDLRQCFNINLVGD 187

Query: 258 IANASSSLAHLKDIKKPN 275
           +      +  +KD+++PN
Sbjct: 188 L--EKRCMERIKDLRRPN 203


>AT4G08980.5 | Symbols: FBW2 | F-BOX WITH WD-40 2 |
           chr4:5758993-5760108 FORWARD LENGTH=317
          Length = 317

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 31/242 (12%)

Query: 13  WSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDSPRELPRW 72
           W EL  + L  I S L + ++      VCK+W  A   P      +++            
Sbjct: 10  WDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIE-----------L 58

Query: 73  WSPEFEAK--IDSMLRSVVQWTHIFLTQIRIRHC-SDRSLALVAERCPNLEVLSI-RSCP 128
           WS  F     +D ML  ++  +   L ++ +    +D   + +A+   +L+ L + RS  
Sbjct: 59  WSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRS-- 116

Query: 129 HVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHV 188
            +T+  +  +A     L  LD+SYC  +  +++  IG++C +L+   RN M+ LD +  V
Sbjct: 117 GLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRN-MHPLDVASVV 175

Query: 189 GIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLS 248
                          D EA AIA +MP L+ LEI + ++S +G+  I   C  LEFL+L 
Sbjct: 176 S-------------HDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELR 222

Query: 249 GC 250
           GC
Sbjct: 223 GC 224


>AT4G08980.4 | Symbols: FBW2 | F-BOX WITH WD-40 2 |
           chr4:5758993-5760108 FORWARD LENGTH=317
          Length = 317

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 31/242 (12%)

Query: 13  WSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDSPRELPRW 72
           W EL  + L  I S L + ++      VCK+W  A   P      +++            
Sbjct: 10  WDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIE-----------L 58

Query: 73  WSPEFEAK--IDSMLRSVVQWTHIFLTQIRIRHC-SDRSLALVAERCPNLEVLSI-RSCP 128
           WS  F     +D ML  ++  +   L ++ +    +D   + +A+   +L+ L + RS  
Sbjct: 59  WSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRS-- 116

Query: 129 HVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHV 188
            +T+  +  +A     L  LD+SYC  +  +++  IG++C +L+   RN M+ LD +  V
Sbjct: 117 GLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRN-MHPLDVASVV 175

Query: 189 GIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLS 248
                          D EA AIA +MP L+ LEI + ++S +G+  I   C  LEFL+L 
Sbjct: 176 S-------------HDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELR 222

Query: 249 GC 250
           GC
Sbjct: 223 GC 224


>AT4G08980.2 | Symbols: FBW2 | F-BOX WITH WD-40 2 |
           chr4:5758993-5760108 FORWARD LENGTH=317
          Length = 317

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 31/242 (12%)

Query: 13  WSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDSPRELPRW 72
           W EL  + L  I S L + ++      VCK+W  A   P      +++            
Sbjct: 10  WDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIE-----------L 58

Query: 73  WSPEFEAK--IDSMLRSVVQWTHIFLTQIRIRHC-SDRSLALVAERCPNLEVLSI-RSCP 128
           WS  F     +D ML  ++  +   L ++ +    +D   + +A+   +L+ L + RS  
Sbjct: 59  WSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRS-- 116

Query: 129 HVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHV 188
            +T+  +  +A     L  LD+SYC  +  +++  IG++C +L+   RN M+ LD +  V
Sbjct: 117 GLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRN-MHPLDVASVV 175

Query: 189 GIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLS 248
                          D EA AIA +MP L+ LEI + ++S +G+  I   C  LEFL+L 
Sbjct: 176 S-------------HDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELR 222

Query: 249 GC 250
           GC
Sbjct: 223 GC 224


>AT4G08980.3 | Symbols: FBW2 | F-BOX WITH WD-40 2 |
           chr4:5758993-5760108 FORWARD LENGTH=317
          Length = 317

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 31/242 (12%)

Query: 13  WSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDSPRELPRW 72
           W EL  + L  I S L + ++      VCK+W  A   P      +++            
Sbjct: 10  WDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIE-----------L 58

Query: 73  WSPEFEAK--IDSMLRSVVQWTHIFLTQIRIRHC-SDRSLALVAERCPNLEVLSI-RSCP 128
           WS  F     +D ML  ++  +   L ++ +    +D   + +A+   +L+ L + RS  
Sbjct: 59  WSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRS-- 116

Query: 129 HVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHV 188
            +T+  +  +A     L  LD+SYC  +  +++  IG++C +L+   RN M+ LD +  V
Sbjct: 117 GLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRN-MHPLDVASVV 175

Query: 189 GIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLS 248
                          D EA AIA +MP L+ LEI + ++S +G+  I   C  LEFL+L 
Sbjct: 176 S-------------HDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELR 222

Query: 249 GC 250
           GC
Sbjct: 223 GC 224


>AT4G08980.1 | Symbols: FBW2 | F-BOX WITH WD-40 2 |
           chr4:5758993-5760108 FORWARD LENGTH=317
          Length = 317

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 31/242 (12%)

Query: 13  WSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDSPRELPRW 72
           W EL  + L  I S L + ++      VCK+W  A   P      +++            
Sbjct: 10  WDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIE-----------L 58

Query: 73  WSPEFEAK--IDSMLRSVVQWTHIFLTQIRIRHC-SDRSLALVAERCPNLEVLSI-RSCP 128
           WS  F     +D ML  ++  +   L ++ +    +D   + +A+   +L+ L + RS  
Sbjct: 59  WSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRS-- 116

Query: 129 HVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHV 188
            +T+  +  +A     L  LD+SYC  +  +++  IG++C +L+   RN M+ LD +  V
Sbjct: 117 GLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRN-MHPLDVASVV 175

Query: 189 GIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLS 248
                          D EA AIA +MP L+ LEI + ++S +G+  I   C  LEFL+L 
Sbjct: 176 S-------------HDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELR 222

Query: 249 GC 250
           GC
Sbjct: 223 GC 224


>AT5G52480.1 | Symbols:  | RNI-like superfamily protein |
           chr5:21296918-21297762 REVERSE LENGTH=241
          Length = 241

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 85/175 (48%), Gaps = 19/175 (10%)

Query: 82  DSMLRSVVQWTHIFLTQIRIR-HCSDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAV 140
           +++ R+ V  +   L +I I    SD  L  +AER  NL  L +  C  +TDD   +  V
Sbjct: 16  EAICRNAVDRSEGGLLEINIGDFGSDSLLTYIAERSSNLRSLRLM-CSEITDDGFVQAVV 74

Query: 141 NCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNACP 200
             P L EL++S    ++ +S+ L G +CPNLK L  N + +L                  
Sbjct: 75  KLPMLEELEVS-GISLSGESMKLAGLSCPNLKTLMLNRLFYLSSDDDD------------ 121

Query: 201 QDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLSGCANLTS 255
                +A AIA SMP L  L++  +KL+  GLN I   CP+LE LDL  C NL  
Sbjct: 122 ----HDAIAIAESMPKLRHLQLCGNKLTKTGLNAILDGCPHLEHLDLRQCINLVG 172


>AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr4:8845927-8848701 FORWARD LENGTH=610
          Length = 610

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 32/199 (16%)

Query: 105 SDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALI 164
            + +L  + + C +LE+L +  C  + D ++  IA  C  L++L I  CY++ +K +  I
Sbjct: 386 GNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISI 445

Query: 165 GRNCPNLKVLKRNLMNWLDPSQHVGIVPD---EYLN--ACPQDGDTEAAAIARSMPHLEW 219
           G++C +L  L     + +     + I      + LN   C Q  D    AIAR  P L  
Sbjct: 446 GKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAGITAIARGCPQLTH 505

Query: 220 LEIRFSK---------------------------LSAKGLNLICQRCPNLEFLDLSGCAN 252
           L+I   +                           ++  GLN + Q+C  LE   +  C  
Sbjct: 506 LDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPG 565

Query: 253 LTSRDIANASSSLAHLKDI 271
           +TS  +A   SS  H+K +
Sbjct: 566 ITSAGVATVVSSCPHIKKV 584



 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 19/238 (7%)

Query: 48  FKEPSLHSVFNLDPLFDSPREL----PRWWSPEFEAKIDSMLRSVVQWTHIFLTQIRIRH 103
            K   L  V   D  F +  EL     R     F+   D  +R++ + +   L  + +  
Sbjct: 271 LKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSK-KLKDLTLSD 329

Query: 104 C---SDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKS 160
           C   S + L  +A  C  LE + I  C ++    I  I  +CP+L+EL + YC  + + +
Sbjct: 330 CYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSA 389

Query: 161 LALIGRNCPNLKVLKRNLMNWLDPSQHVGI------VPDEYLNACPQDGDTEAAAIARSM 214
           L  IG+ C +L++L     + +       I      +   ++  C + G+    +I +  
Sbjct: 390 LQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHC 449

Query: 215 PHLEWLEIRF-SKLSAKGLNLICQRCPNLEFLDLSGCANLTSRD---IANASSSLAHL 268
             L  L +RF  K+  K L  I + C +L+ L++SGC  ++      IA     L HL
Sbjct: 450 KSLTELSLRFCDKVGNKALIAIGKGC-SLQQLNVSGCNQISDAGITAIARGCPQLTHL 506



 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%)

Query: 82  DSMLRSVVQWTHIFLT-QIRIRHCSDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAV 140
           D  L +V Q  H     +++    +D + A V E C +LE L++ S  H TD  +  I  
Sbjct: 258 DKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGK 317

Query: 141 NCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNACP 200
              KL++L +S CY V+ K L  I   C  L+ ++                    +N C 
Sbjct: 318 GSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVE--------------------INGCH 357

Query: 201 QDGDTEAAAIARSMPHLEWLEIRF-SKLSAKGLNLICQRCPNLEFLDLSGCANLTSRDIA 259
             G     AI +S P L+ L + +  ++    L  I + C +LE L L  C+ +   DIA
Sbjct: 358 NIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIG--DIA 415

Query: 260 NAS 262
             S
Sbjct: 416 MCS 418



 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 2/95 (2%)

Query: 78  EAKIDSMLRSVVQWTHIFLTQIRIRHCSDRSLALVAERCPNLEVLSIRSCPHVTDDSISR 137
           +A I ++ R   Q TH+ ++ ++  +  D  LA + E CP L+ L +  C H+TD+ ++ 
Sbjct: 490 DAGITAIARGCPQLTHLDISVLQ--NIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNH 547

Query: 138 IAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLK 172
           +   C  L    + YC  +T   +A +  +CP++K
Sbjct: 548 LVQKCKLLETCHMVYCPGITSAGVATVVSSCPHIK 582



 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 17/187 (9%)

Query: 86  RSVVQWTHIFLTQIRIRHCSDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKL 145
           + +   TH     +     +D  L  +A   P +E LS+  CP+V+   +  +A  C  L
Sbjct: 109 KKLTDKTHSGAENVESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSL 168

Query: 146 RELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIV----------PDEY 195
           + LD+  CY V  + LA +G+ C  L+ L    + + +    VG++              
Sbjct: 169 KSLDLQGCY-VGDQGLAAVGKFCKQLEELN---LRFCEGLTDVGVIDLVVGCSKSLKSIG 224

Query: 196 LNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLSGCANLTS 255
           + A  +  D    A+      LE L +    +  KGL  + Q C  L+ L L  C ++T 
Sbjct: 225 VAASAKITDLSLEAVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQ-CVSVT- 282

Query: 256 RDIANAS 262
            D+A A+
Sbjct: 283 -DVAFAA 288


>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
           chr5:8794842-8796882 REVERSE LENGTH=623
          Length = 623

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 124/306 (40%), Gaps = 41/306 (13%)

Query: 16  LTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDSPRELPRWWSP 75
           L  ECL  IL RL           V K W +     S  S  N   + D   E   + S 
Sbjct: 58  LPEECLFEILRRLPSGQERSACACVSKHWLNLLSSIS-RSEVNESSVQD-VEEGEGFLSR 115

Query: 76  EFEAKIDSMLR----SVVQWTHIFLTQIRIR------HCSDRSLALVAERCPNLEVLSIR 125
             E K  + LR    +V   +   L +++IR        +D  L  VA  CP+L ++S+ 
Sbjct: 116 SLEGKKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTDVGLGAVAHGCPSLRIVSLW 175

Query: 126 SCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPS 185
           + P V+D  +S IA +CP + +LD+S C  +T   L  I  NC NL              
Sbjct: 176 NLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNL-------------- 221

Query: 186 QHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFS-KLSAKGLNLICQRCPN--- 241
                  D  +++C   G+    AIAR   +L  + IR   ++  +G+  +  +  +   
Sbjct: 222 ------SDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLT 275

Query: 242 ---LEFLDLSGCANLTSRDIANASSSLA--HLKDIKKPNFYIPRSVFHTERYGHWQLYDE 296
              L+ L++SG +         A + L    L+ + +  F++  +    ++     +   
Sbjct: 276 KVKLQMLNVSGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSC 335

Query: 297 RFQTDV 302
           R  TDV
Sbjct: 336 RGMTDV 341


>AT5G52480.2 | Symbols:  | RNI-like superfamily protein |
           chr5:21296918-21297529 REVERSE LENGTH=203
          Length = 203

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 18/141 (12%)

Query: 115 RCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVL 174
           R  NL  L +  C  +TDD   +  V  P L EL++S    ++ +S+ L G +CPNLK L
Sbjct: 12  RSSNLRSLRLM-CSEITDDGFVQAVVKLPMLEELEVS-GISLSGESMKLAGLSCPNLKTL 69

Query: 175 KRNLMNWLDPSQHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNL 234
             N + +L                       +A AIA SMP L  L++  +KL+  GLN 
Sbjct: 70  MLNRLFYLSSDDDD----------------HDAIAIAESMPKLRHLQLCGNKLTKTGLNA 113

Query: 235 ICQRCPNLEFLDLSGCANLTS 255
           I   CP+LE LDL  C NL  
Sbjct: 114 ILDGCPHLEHLDLRQCINLVG 134


>AT4G05490.1 | Symbols:  | RNI-like superfamily protein |
           chr4:2771044-2772252 REVERSE LENGTH=307
          Length = 307

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 123/273 (45%), Gaps = 35/273 (12%)

Query: 7   EGSDSEWSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDSP 66
           E   S W+EL  + L +IL RL+  ++      VC+SW    K+P +    ++       
Sbjct: 21  EEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDM------- 73

Query: 67  RELPRWWSPEFEAKIDSMLRSVVQWTHIFLTQIRI---RHCSDRSLALVAERCPNLEVLS 123
           R L R +       +++  R VV  +   L +  I   R  +   L  +AER  NL  L 
Sbjct: 74  RNLRRLYCI---YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR 130

Query: 124 IRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLD 183
           ++    +T   I    V  P L EL++ YC  +  +    IG+ CPNLK LK        
Sbjct: 131 VKG-GQITSVGIFEAIVKLPLLEELELLYC-SIEEEHFKTIGQACPNLKTLKL------- 181

Query: 184 PSQHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLE 243
               VG     +LN    + D +A AIA +MP L  L++  + L+  GLN I   CP+LE
Sbjct: 182 ----VGFW--SHLN----ESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLE 231

Query: 244 FLDLSGCANLT-SRDIANASSSLAHLKDIKKPN 275
            LDL  C N+    D+      L  +KD + PN
Sbjct: 232 CLDLRQCFNINLFGDLER--QCLERIKDFRCPN 262


>AT5G23340.1 | Symbols:  | RNI-like superfamily protein |
           chr5:7856314-7857983 FORWARD LENGTH=405
          Length = 405

 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 31/172 (18%)

Query: 95  FLTQIRIRHCSDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCY 154
           FL     R  SD+ L+ VAE C +L  L +  C  +TD+S+  ++  C  L  L +  C 
Sbjct: 128 FLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCT 187

Query: 155 DVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNACPQDGDTEAAAIAR-- 212
           ++T   LA + + C  +K L                     +N C   GD   +++A+  
Sbjct: 188 NITDSGLADLVKGCRKIKSLD--------------------INKCSNVGDAGVSSVAKAC 227

Query: 213 --SMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLSGCANLTSRDIANAS 262
             S+  L+ L+    K+  + ++ + Q C NLE L + GC     RDI++ S
Sbjct: 228 ASSLKTLKLLDCY--KVGNESISSLAQFCKNLETLIIGGC-----RDISDES 272



 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 43/260 (16%)

Query: 24  ILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDSPRELPRWWSPEFEAKIDS 83
           +LSRL  D       LVCK W +      L S           ++L     P    ++ S
Sbjct: 18  VLSRLDSDKDKEVFGLVCKRWLN------LQST--------DRKKLAARAGPHMLRRLAS 63

Query: 84  MLRSVVQWTHIFLTQIRIR----HCSDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIA 139
               +V+     L+Q   R      +D  LA+++E    L VL++ +C  +TD  ++ I 
Sbjct: 64  RFTQIVELD---LSQSISRSFYPGVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIG 120

Query: 140 VNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNAC 199
                L+ LD+SYC  ++ K L+ +   C +L+ L                    +L  C
Sbjct: 121 RCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRAL--------------------HLAGC 160

Query: 200 PQDGDTEAAAIARSMPHLEWLEIRF-SKLSAKGLNLICQRCPNLEFLDLSGCANLTSRDI 258
               D    +++     LE L ++  + ++  GL  + + C  ++ LD++ C+N+    +
Sbjct: 161 RFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGV 220

Query: 259 ANASSSLA-HLKDIKKPNFY 277
           ++ + + A  LK +K  + Y
Sbjct: 221 SSVAKACASSLKTLKLLDCY 240



 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 24/171 (14%)

Query: 82  DSMLRSVVQWTHIFLTQIRIRHC---SDRSLALVAERCPNLEVLSIRSCPHVTDDSISRI 138
           D+ + SV +     L  +++  C    + S++ +A+ C NLE L I  C  ++D+SI  +
Sbjct: 217 DAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLL 276

Query: 139 AVNCP-KLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLN 197
           A +C   L+ L + +C +++  SL+ I + C NL+ L       +  +    +  D+ L 
Sbjct: 277 ADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLG 336

Query: 198 ACPQDGDTEAAAIARSMPHLEWLEI-RFSKLSAKGLNLICQRCPNLEFLDL 247
                              L+ L++   +K++  G+  +  +C +LE++D+
Sbjct: 337 -------------------LKVLKVSNCTKITVTGIGKLLDKCSSLEYIDV 368


>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
           chr1:7497479-7499386 FORWARD LENGTH=360
          Length = 360

 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 118/292 (40%), Gaps = 42/292 (14%)

Query: 4   EVEEGSDSEWSELTRECLINILSRLTVDDLWRGTML---VCKSWFSAFKEPSLHSVFNLD 60
           ++E  S  EW ++  E L+ ILS   VDD  R  ++   VC  W  A             
Sbjct: 19  KMEGISIKEWKDIPVELLMRILS--LVDD--RNVIVASGVCTGWRDAIS----------- 63

Query: 61  PLFDSPRELPRWWSPEFEAKIDSMLRSVVQWTHIFLTQIRIRHCSDRSLALVAERCPNLE 120
             F   R    W +    + + S++   V+   + L Q +     D ++  +A  C  L+
Sbjct: 64  --FGLTRLRLSWCNNNMNSLVLSLVPKFVKLQTLNLRQDK-PQLEDNAVEAIANHCHELQ 120

Query: 121 VLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMN 180
            L +     +TD S+  +A  CP L +L++S C   +  ++A + R C  LKVL  NL  
Sbjct: 121 ELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVL--NLCG 178

Query: 181 WLDPSQHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCP 240
                  V  V D  L A   + +   +       +L W E     +S  G+  +   CP
Sbjct: 179 C------VKAVTDNALEAIGNNCNQMQSL------NLGWCE----NISDDGVMSLAYGCP 222

Query: 241 NLEFLDLSGCANLTSRDIANASSSLAHLKDIKKPNFYIPRSVFHTERYGHWQ 292
           +L  LDL GC  +T   +   +    HL+ +     Y  R++     Y   Q
Sbjct: 223 DLRTLDLCGCVLITDESVVALADWCVHLRSL---GLYYCRNITDRAMYSLAQ 271


>AT1G80630.1 | Symbols:  | RNI-like superfamily protein |
           chr1:30308879-30310615 REVERSE LENGTH=578
          Length = 578

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 70/177 (39%), Gaps = 48/177 (27%)

Query: 95  FLTQIRIRHCSDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCY 154
           FL   R  +  D  L  ++  CP +E L +  CP +T D I  +  NC KLR LDIS C 
Sbjct: 375 FLYLSRNHNLLDECLEKISRHCPFIESLDVAQCPGITRDGILEVWRNCGKLRSLDISRCT 434

Query: 155 DVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNACPQDGDTEAAAIARSM 214
            +  KSL ++    P L                      E L AC    D EA       
Sbjct: 435 GI--KSLGVVDFELPKL----------------------ESLRACGTWIDDEA------- 463

Query: 215 PHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLSGCANLTSRDIANASSSLAHLKDI 271
                            L++I ++C  L  LDL GC N++SR +     S   L++I
Sbjct: 464 -----------------LDMISKKCRGLLHLDLQGCLNVSSRGVKEVVQSCIRLREI 503


>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
           chr2:10848018-10850275 REVERSE LENGTH=628
          Length = 628

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 84/214 (39%), Gaps = 29/214 (13%)

Query: 19  ECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDSPRELPRWWSPEFE 78
           ECL  I  RL+          V K W +         +     + +   +     S   +
Sbjct: 70  ECLFEIFRRLSGPQERSACAFVSKQWLTLVSSIRQKEIDVPSKITEDGDDCEGCLSRSLD 129

Query: 79  AKIDSMLR----SVVQWTHIFLTQIRIR-----HCSDRSLALVAERCPNLEVLSIRSCPH 129
            K  + +R    +V       L ++ IR       SD  L  +   CP+L  LS+ +   
Sbjct: 130 GKKATDVRLAAIAVGTAGRGGLGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWNVST 189

Query: 130 VTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVG 189
           +TD+ +  IA  C +L +L+++ C  +T K L  I ++CPNL  L               
Sbjct: 190 ITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELT-------------- 235

Query: 190 IVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIR 223
                 L AC + GD    AIARS   L+ + I+
Sbjct: 236 ------LEACSRIGDEGLLAIARSCSKLKSVSIK 263



 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 23/179 (12%)

Query: 96  LTQIRIRHCSDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYD 155
           LT    +  +D  L  V + CPN++   I   P ++D+ +   A     L  L +  C+ 
Sbjct: 340 LTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHR 399

Query: 156 VTH--------------KSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNACPQ 201
           VT               K+ +L+  NC ++    R+L   L  S H   +    +  CP 
Sbjct: 400 VTQFGFFGSLLNCGEKLKAFSLV--NCLSI----RDLTTGLPASSHCSALRSLSIRNCPG 453

Query: 202 DGDTEAAAIARSMPHLEWLEI-RFSKLSAKGLNLICQRCPNLEFLDLSGCANLTSRDIA 259
            GD   AAI +  P LE +++     ++  G   + Q   +L  ++ SGC+NLT R I+
Sbjct: 454 FGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQ--SSLVKINFSGCSNLTDRVIS 510



 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 96  LTQIRIRHCS---DRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISY 152
           L ++ +  CS   D+ L  +A+ CPNL  L++ +C  + D+ +  IA +C KL+ + I  
Sbjct: 205 LEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKN 264

Query: 153 CYDVTHKSLA-LIGRNCPNLKVLKRNLMNWLDPSQHV 188
           C  V  + +A L+     +L  LK  ++N  D S  V
Sbjct: 265 CPLVRDQGIASLLSNTTCSLAKLKLQMLNVTDVSLAV 301


>AT5G27920.1 | Symbols:  | F-box family protein |
           chr5:9942063-9944507 REVERSE LENGTH=642
          Length = 642

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 23/150 (15%)

Query: 105 SDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALI 164
           +DR L  ++ +C NL+ L +  C +++D  I  I   C KL ELD+  C       LA +
Sbjct: 417 NDRGLEYIS-KCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAAL 475

Query: 165 GRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRF 224
            R C +L  L                     L+ C +  DT    I R +  L  LE+R 
Sbjct: 476 SRGCKSLNRL--------------------ILSYCCELTDTGVEQI-RQLELLSHLELRG 514

Query: 225 SK-LSAKGLNLICQRCPNLEFLDLSGCANL 253
            K ++  GL  I   C  L +LD+  C N+
Sbjct: 515 LKNITGVGLAAIASGCKKLGYLDVKLCENI 544


>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
           chr1:28940888-28942401 FORWARD LENGTH=360
          Length = 360

 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 118/295 (40%), Gaps = 43/295 (14%)

Query: 2   ENEVEEGS-DSEWSELTRECLINILSRLTVDDLWRGTML---VCKSWFSAFKEPSLHSVF 57
           EN   EG   SEW ++  E L+ IL+   VDD  R  ++   +C  W  A          
Sbjct: 16  ENMKMEGVLISEWKDIPVELLMKILN--LVDD--RTVIIASCICSGWRDAVS-------- 63

Query: 58  NLDPLFDSPRELPRWWSPEFEAKIDSMLRSVVQWTHIFLTQIRIRHCSDRSLALVAERCP 117
                    R    W      + + S+    V+   + L Q + +   D ++  +A  C 
Sbjct: 64  -----LGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQL-EDNAVEAIANHCH 117

Query: 118 NLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRN 177
            L+ L +     +TD S+  +A  C  L +L++S C   +  +LA + R C  LK+L  N
Sbjct: 118 ELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKIL--N 175

Query: 178 LMNWLDPSQHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQ 237
           L   ++       V D  L A  ++ +   +       +L W E     +S  G+  +  
Sbjct: 176 LCGCVEA------VSDNTLQAIGENCNQLQSL------NLGWCE----NISDDGVMSLAY 219

Query: 238 RCPNLEFLDLSGCANLTSRDIANASSSLAHLKDIKKPNFYIPRSVFHTERYGHWQ 292
            CP+L  LDL  C  +T   +   ++   HL+ +     Y  R++     Y   Q
Sbjct: 220 GCPDLRTLDLCSCVLITDESVVALANRCIHLRSL---GLYYCRNITDRAMYSLAQ 271


>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
           protein | chr1:28940888-28942401 FORWARD LENGTH=360
          Length = 360

 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 118/295 (40%), Gaps = 43/295 (14%)

Query: 2   ENEVEEGS-DSEWSELTRECLINILSRLTVDDLWRGTML---VCKSWFSAFKEPSLHSVF 57
           EN   EG   SEW ++  E L+ IL+   VDD  R  ++   +C  W  A          
Sbjct: 16  ENMKMEGVLISEWKDIPVELLMKILN--LVDD--RTVIIASCICSGWRDAVS-------- 63

Query: 58  NLDPLFDSPRELPRWWSPEFEAKIDSMLRSVVQWTHIFLTQIRIRHCSDRSLALVAERCP 117
                    R    W      + + S+    V+   + L Q + +   D ++  +A  C 
Sbjct: 64  -----LGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQL-EDNAVEAIANHCH 117

Query: 118 NLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRN 177
            L+ L +     +TD S+  +A  C  L +L++S C   +  +LA + R C  LK+L  N
Sbjct: 118 ELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKIL--N 175

Query: 178 LMNWLDPSQHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQ 237
           L   ++       V D  L A  ++ +   +       +L W E     +S  G+  +  
Sbjct: 176 LCGCVEA------VSDNTLQAIGENCNQLQSL------NLGWCE----NISDDGVMSLAY 219

Query: 238 RCPNLEFLDLSGCANLTSRDIANASSSLAHLKDIKKPNFYIPRSVFHTERYGHWQ 292
            CP+L  LDL  C  +T   +   ++   HL+ +     Y  R++     Y   Q
Sbjct: 220 GCPDLRTLDLCSCVLITDESVVALANRCIHLRSL---GLYYCRNITDRAMYSLAQ 271


>AT4G33210.1 | Symbols: SLOMO | F-box family protein |
           chr4:16015971-16020697 REVERSE LENGTH=990
          Length = 990

 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 6/110 (5%)

Query: 116 CPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLK 175
           CP L++L I SC  + D +I   A++CP+L  LD+S C  V+ ++L  I + C NL +L 
Sbjct: 368 CPLLQLLDIASCHKLLDAAIRSAAISCPQLESLDVSNCSCVSDETLREIAQACANLHILN 427

Query: 176 RNLM-NWLDPSQHVGIVPDEYLNACPQDGDTEAAA--IARSMPHLEWLEI 222
            +   N    S H+ ++    L++C  +G T A+   IA S P LE LE+
Sbjct: 428 ASYCPNISLESVHLPMLTVLKLHSC--EGITSASMTWIANS-PALEVLEL 474



 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)

Query: 95  FLTQIRIRHCS---DRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDIS 151
            LT +    CS   D  L+     CP +E L + SCP +  D +S +    P L  LD+S
Sbjct: 685 LLTSLDASFCSQLRDDCLSATTASCPLIESLVLMSCPSIGSDGLSSLN-GLPNLTVLDLS 743

Query: 152 YCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNACPQDGDTEAAAIA 211
           Y + +   +L  + ++C  LKVLK     +L          D  L    ++G        
Sbjct: 744 YTFLM---NLEPVFKSCIQLKVLKLQACKYL---------TDSSLEPLYKEG-------- 783

Query: 212 RSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLDLSGCANLTSRDIANASSSLAHLKD 270
            ++P LE L++ +  L    ++ +   C +L  L L+GC N+   D  + S    HL D
Sbjct: 784 -ALPALEELDLSYGTLCQTAIDDLLACCTHLTHLSLNGCVNMHDLDWGSTS---VHLFD 838


>AT3G58530.1 | Symbols:  | RNI-like superfamily protein |
           chr3:21645759-21648219 FORWARD LENGTH=353
          Length = 353

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 10/173 (5%)

Query: 105 SDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALI 164
           SD  +  +   CP L+V SI     VTD  I  +  NC  + +L++S C  +T KS+ L+
Sbjct: 125 SDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLV 184

Query: 165 GRNCPNLKVLKRNLMNWLDPSQHVGIVPD----EYLNACPQDGDTEAAAIARS-MPHLEW 219
             + P+L+ L       +     + ++      + LN     G T+ A +  S +  L +
Sbjct: 185 AESYPDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRF 244

Query: 220 LEIRFSK-LSAKGLNLICQRCPNLEFLDLSGCANLTS---RDIANASSSLAHL 268
           L+I  ++ +S +G+  I  +C  LE L+L+ C  +T      IAN+ +SL  L
Sbjct: 245 LDICGAQNISDEGIGHI-AKCNKLESLNLTWCVRITDAGVNTIANSCTSLEFL 296


>AT3G48880.2 | Symbols:  | RNI-like superfamily protein |
           chr3:18127873-18129008 FORWARD LENGTH=309
          Length = 309

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 30/255 (11%)

Query: 1   MENEVEEGSDSEWSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLD 60
           ME E E      W EL  + L+ I  + +V +L  G   VC+ W +A  +P L    +L 
Sbjct: 1   MEEEYESRRLRRWEELDTDILVRIFQKFSVFELTSGLAHVCRGWRAACCDPILWKTVDLS 60

Query: 61  PLFDSPRELPRWWSPEFEAKIDSMLRSVVQWTHIF---LTQIRIRH----CSDRSLALVA 113
            +  S  ++P       E + D  L  +++ +       T+  I H     SD  L   A
Sbjct: 61  NMRSSFIKIPLEPYVYVERRSDEALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQLTYTA 120

Query: 114 ERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKV 173
           ERCP L  + + +   +    I +       L  L +    +  +  L  I +NC N K 
Sbjct: 121 ERCPGLRRVVLPAWNRIKKTGICKAIRIWKDLESLTMPSIANPPY-LLTEIAKNCKNFKE 179

Query: 174 LKRNLMNWLDPSQHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLN 233
           LK  +M            P E            A  +   +P+++ L IR S +  + L 
Sbjct: 180 LK--IMG-----------PFEVFF---------ANTLITCLPNIKTLSIRCSAIKREALM 217

Query: 234 LICQRCPNLEFLDLS 248
            I    P+LE L++S
Sbjct: 218 KILDGLPSLEVLNIS 232


>AT3G48880.1 | Symbols:  | RNI-like superfamily protein |
           chr3:18127873-18129008 FORWARD LENGTH=309
          Length = 309

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 30/255 (11%)

Query: 1   MENEVEEGSDSEWSELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLD 60
           ME E E      W EL  + L+ I  + +V +L  G   VC+ W +A  +P L    +L 
Sbjct: 1   MEEEYESRRLRRWEELDTDILVRIFQKFSVFELTSGLAHVCRGWRAACCDPILWKTVDLS 60

Query: 61  PLFDSPRELPRWWSPEFEAKIDSMLRSVVQWTHIF---LTQIRIRH----CSDRSLALVA 113
            +  S  ++P       E + D  L  +++ +       T+  I H     SD  L   A
Sbjct: 61  NMRSSFIKIPLEPYVYVERRSDEALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQLTYTA 120

Query: 114 ERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKV 173
           ERCP L  + + +   +    I +       L  L +    +  +  L  I +NC N K 
Sbjct: 121 ERCPGLRRVVLPAWNRIKKTGICKAIRIWKDLESLTMPSIANPPY-LLTEIAKNCKNFKE 179

Query: 174 LKRNLMNWLDPSQHVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLN 233
           LK  +M            P E            A  +   +P+++ L IR S +  + L 
Sbjct: 180 LK--IMG-----------PFEVFF---------ANTLITCLPNIKTLSIRCSAIKREALM 217

Query: 234 LICQRCPNLEFLDLS 248
            I    P+LE L++S
Sbjct: 218 KILDGLPSLEVLNIS 232


>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting protein
           2 | chr5:26831677-26833260 REVERSE LENGTH=527
          Length = 527

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 65/159 (40%), Gaps = 31/159 (19%)

Query: 87  SVVQWTHIFLTQIRIRHCSDRSLALVAERCPNLEVLSIRS--CPHVTDDSISRIAVNCPK 144
           S V+  HI    ++   CS+  L  VAERC  L  L I       + D+ +  +A +C  
Sbjct: 287 SNVETLHI----VKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLN 342

Query: 145 LRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNACPQD-- 202
           L+EL +    + TH SLA I  NC  L                      E L  C     
Sbjct: 343 LQEL-VLIGVNATHMSLAAIASNCEKL----------------------ERLALCGSGTI 379

Query: 203 GDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPN 241
           GDTE A IAR    L    I+   +S +G+  +   CPN
Sbjct: 380 GDTEIACIARKCGALRKFCIKGCPVSDRGIEALAVGCPN 418



 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 15/181 (8%)

Query: 14  SELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLDPLFDSPRELPRWW 73
            +L  ECL ++   L   D  R + LVCK W       S H +       D+  E+  + 
Sbjct: 44  GDLPDECLAHVFQFLGAGDRKRCS-LVCKRWL-LVDGQSRHRLS-----LDAKDEISSFL 96

Query: 74  SPEFEAKIDSMLRSVVQWTHIFLTQIRIRHCSDRSLALVAERCPNLEVLSIRSCPHVTDD 133
           +  F  + DS+ +  ++     ++       SD +LA+++ RC NL  + +R C  +TD 
Sbjct: 97  TSMFN-RFDSVTKLALRCDRKSVSL------SDEALAMISVRCLNLTRVKLRGCREITDL 149

Query: 134 SISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPD 193
            +   A NC  L++L +  C +   K +  +  +C  L+ L    +  +  +  +  +PD
Sbjct: 150 GMEDFAKNCKNLKKLSVGSC-NFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPD 208

Query: 194 E 194
           +
Sbjct: 209 D 209


>AT5G01720.1 | Symbols:  | RNI-like superfamily protein |
           chr5:267118-270391 REVERSE LENGTH=665
          Length = 665

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 15/138 (10%)

Query: 105 SDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALI 164
           +D+ L+ +   C NL  L +     +TD  IS IA  C  L  ++ISYC D+T KSL  +
Sbjct: 445 TDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKSLVSL 504

Query: 165 ----------GRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLNACPQDGDTEAAAIARSM 214
                      R CPN  +  + L       + +  V    L  CP   D    A+A   
Sbjct: 505 SKCSLLQTFESRGCPN--ITSQGLAAIAVRCKRLAKVD---LKKCPSINDAGLLALAHFS 559

Query: 215 PHLEWLEIRFSKLSAKGL 232
            +L+ + +  + ++  GL
Sbjct: 560 QNLKQINVSDTAVTEVGL 577



 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 46/183 (25%)

Query: 102 RHCSDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDIS---------- 151
           R  S  S+  +A  CP L  L + SC  V+ ++   I   C  L ELD++          
Sbjct: 366 RKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLK 425

Query: 152 --------------YCYDVTHKSLALIGRNCPNLKVLKRNLMNWLDPSQHVGIVPDEYLN 197
                          C ++T K L+ IG  C NL+         LD  + VGI       
Sbjct: 426 SISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLR--------ELDLYRSVGIT------ 471

Query: 198 ACPQDGDTEAAAIARSMPHLEWLEIRFSK-LSAKGLNLICQRCPNLEFLDLSGCANLTSR 256
                 D   + IA+   HLE + I + + ++ K L  +  +C  L+  +  GC N+TS+
Sbjct: 472 ------DVGISTIAQGCIHLETINISYCQDITDKSLVSL-SKCSLLQTFESRGCPNITSQ 524

Query: 257 DIA 259
            +A
Sbjct: 525 GLA 527



 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 39/216 (18%)

Query: 100 RIRHCSDRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISY------- 152
           R +  +D  +  +A  C  L  +S++ C  V D  +  +AV C  +R LD+SY       
Sbjct: 159 RCKMLTDMGIGCIAVGCKKLNTVSLKWCVGVGDLGVGLLAVKCKDIRTLDLSYLPITGKC 218

Query: 153 -----------------CYDVTHKSLALIGRNCPNLKVLK---------RNLMNWLDPSQ 186
                            C+ V   SL  +  +C +LK L          R L + L  + 
Sbjct: 219 LHDILKLQHLEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRGLTSLLSGA- 277

Query: 187 HVGIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRFSKLSAKGLNLICQRCPNLEFLD 246
             G +    L+ C      + A+  + +  L+ + +    ++  GL  I   C +L+ + 
Sbjct: 278 --GYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLDGCSVTPDGLKAIGTLCNSLKEVS 335

Query: 247 LSGCANLTSRDIANASSSLAHLKDIKKPNFYIPRSV 282
           LS C ++T   +   SS +  LKD++K +    R +
Sbjct: 336 LSKCVSVTDEGL---SSLVMKLKDLRKLDITCCRKL 368



 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 13/186 (6%)

Query: 96  LTQIRIRHCSDR--SLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYC 153
           L  IR+  CS     L  +   C +L+ +S+  C  VTD+ +S + +    LR+LDI+ C
Sbjct: 306 LQSIRLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCC 365

Query: 154 YDVTHKSLALIGRNCPNLKVLKRNLMN-------WLDPSQHVGIVPDEYLNACPQDGDTE 206
             ++  S+  I  +CP L  LK    +       WL   Q   ++  E L+    + D E
Sbjct: 366 RKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWL-IGQKCRLL--EELDLTDNEIDDE 422

Query: 207 AAAIARSMPHLEWLEIRFS-KLSAKGLNLICQRCPNLEFLDLSGCANLTSRDIANASSSL 265
                 S   L  L++     ++ KGL+ I   C NL  LDL     +T   I+  +   
Sbjct: 423 GLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGC 482

Query: 266 AHLKDI 271
            HL+ I
Sbjct: 483 IHLETI 488


>AT3G60350.1 | Symbols: ARABIDILLO-2, ARABIDILLO2 | ARABIDILLO-2 |
           chr3:22306806-22310596 REVERSE LENGTH=928
          Length = 928

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 102 RHCSDRSLALVAERCPNLEVLSIRS--CPHVTDDSISRIAVNCPKLRELDISYCYDVTHK 159
           R  +D +L+++A R   LE L +    C  +T D+I  IA  CPKL++L +S   DV+ +
Sbjct: 136 RKITDATLSMIAARHEALESLQLGPDFCERITSDAIRVIAFCCPKLKKLRVSGMRDVSSE 195

Query: 160 SLALIGRNCPNL 171
           ++  + ++CP L
Sbjct: 196 AIESLAKHCPQL 207


>AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 |
           chr4:4197847-4199511 REVERSE LENGTH=554
          Length = 554

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 17/153 (11%)

Query: 4   EVEEGSDSEW---SELTRECLINILSRLTVDDLWRGTMLVCKSWFSAFKEPSLHSVFNLD 60
           E   G+D  +   S L  ECL  I   LT  DL R + LVC+ W +   E       +L 
Sbjct: 62  EQNSGADEPYDYISNLPDECLSLIFQSLTCADLKRCS-LVCRRWLTI--EGQCRHRLSLK 118

Query: 61  PLFDSPRELPRWWSPEFEAKIDSMLRSVVQWTHIFLTQIRIRHCSDRSLALVAERCPNLE 120
              D    +P  ++  F++    +LRS  +   I           D +  +++ RC NL 
Sbjct: 119 AQSDLISVIPSLFT-RFDSVTKLVLRSDRRSLGI----------CDNAFVMISVRCRNLT 167

Query: 121 VLSIRSCPHVTDDSISRIAVNCPKLRELDISYC 153
            L +R CP ++D  I     NC  L+++    C
Sbjct: 168 RLKLRGCPEISDLGIIGFTENCRSLKKVSFGSC 200


>AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 |
           chr2:18511719-18515762 REVERSE LENGTH=930
          Length = 930

 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 102 RHCSDRSLALVAERCPNLEVLSIRS--CPHVTDDSISRIAVNCPKLRELDISYCYDVTHK 159
           +  +D +L+++  R   LE L +    C  +T D+I  +A  CPKL++L +S   DVT +
Sbjct: 143 KKITDATLSMIVARHEALESLQLGPDFCERITSDAIKAVAFCCPKLKKLRLSGIRDVTSE 202

Query: 160 SLALIGRNCPNLKVLKRNLMNWLD 183
           ++  + ++CP L     N + +LD
Sbjct: 203 AIEALAKHCPQL-----NDLGFLD 221


>AT5G21900.1 | Symbols:  | RNI-like superfamily protein |
           chr5:7238239-7240338 FORWARD LENGTH=544
          Length = 544

 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 7/177 (3%)

Query: 115 RCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLKVL 174
           R   L  LS+ +C  VTD+ +  I   C KL  LDI+    +T KSL  I   C  LK L
Sbjct: 360 RSSILTDLSLANCNEVTDECMWHIGRYCKKLEALDITDLDKLTDKSLEFITEGCRYLKSL 419

Query: 175 KRNLMNWLDPSQHV------GIVPDEYLNACPQDGDTEAAAIARSMPHLEWLEIRF-SKL 227
           K     + D           G + +  LN     G   A ++A+    L++L++ +  +L
Sbjct: 420 KLTSNRFSDECIAAFLEVSGGSLRELCLNKVRDVGPETAFSLAKVCKMLQFLDLSWCRRL 479

Query: 228 SAKGLNLICQRCPNLEFLDLSGCANLTSRDIANASSSLAHLKDIKKPNFYIPRSVFH 284
               L  I + C +L+ L L G   +    +   S S  H+  +K  + Y     F+
Sbjct: 480 KEDDLRRILRCCSSLQSLKLFGWTQVEDTYLEELSRSDVHITGLKLTSLYAHLDNFY 536