Miyakogusa Predicted Gene

Lj4g3v1983570.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983570.2 Non Chatacterized Hit- tr|B9STR2|B9STR2_RICCO
Putative uncharacterized protein OS=Ricinus communis G,76.47,1e-16,
,CUFF.50056.2
         (130 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30900.2 | Symbols:  | DNAse I-like superfamily protein | chr...   252   5e-68
AT4G30900.1 | Symbols:  | DNAse I-like superfamily protein | chr...   252   5e-68

>AT4G30900.2 | Symbols:  | DNAse I-like superfamily protein |
           chr4:15040021-15042203 FORWARD LENGTH=316
          Length = 316

 Score =  252 bits (643), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 114/130 (87%), Positives = 125/130 (96%)

Query: 1   MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 60
           +DE SPRARRRSALLTWQHIASLPP+LPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM
Sbjct: 144 LDEISPRARRRSALLTWQHIASLPPTLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 203

Query: 61  RDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIFRALCLCWDRQTQDLHIDWIFFRG 120
           RDAWPS+RVRKNV+LIRTYH FKG+KQGT+E+LKLIFRALCLCWDRQTQDLH DWI +RG
Sbjct: 204 RDAWPSARVRKNVALIRTYHDFKGDKQGTVEFLKLIFRALCLCWDRQTQDLHTDWILYRG 263

Query: 121 RSLIPVSCEV 130
           RS++PV CE+
Sbjct: 264 RSIVPVMCEI 273


>AT4G30900.1 | Symbols:  | DNAse I-like superfamily protein |
           chr4:15040021-15042203 FORWARD LENGTH=316
          Length = 316

 Score =  252 bits (643), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 114/130 (87%), Positives = 125/130 (96%)

Query: 1   MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 60
           +DE SPRARRRSALLTWQHIASLPP+LPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM
Sbjct: 144 LDEISPRARRRSALLTWQHIASLPPTLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 203

Query: 61  RDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIFRALCLCWDRQTQDLHIDWIFFRG 120
           RDAWPS+RVRKNV+LIRTYH FKG+KQGT+E+LKLIFRALCLCWDRQTQDLH DWI +RG
Sbjct: 204 RDAWPSARVRKNVALIRTYHDFKGDKQGTVEFLKLIFRALCLCWDRQTQDLHTDWILYRG 263

Query: 121 RSLIPVSCEV 130
           RS++PV CE+
Sbjct: 264 RSIVPVMCEI 273