Miyakogusa Predicted Gene

Lj4g3v1983570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983570.1 Non Chatacterized Hit- tr|I1JGP9|I1JGP9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,95.22,0,Exo_endo_phos,Endonuclease/exonuclease/phosphatase; DNase
I-like,Endonuclease/exonuclease/phosphatas,CUFF.50056.1
         (273 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30900.2 | Symbols:  | DNAse I-like superfamily protein | chr...   504   e-143
AT4G30900.1 | Symbols:  | DNAse I-like superfamily protein | chr...   504   e-143

>AT4G30900.2 | Symbols:  | DNAse I-like superfamily protein |
           chr4:15040021-15042203 FORWARD LENGTH=316
          Length = 316

 Score =  504 bits (1299), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 231/273 (84%), Positives = 257/273 (94%)

Query: 1   MSVSLTVMTFNLHDDQPPDSPNSWEKRRDICISVITSYSPFILCTQQGVKAQLDFLQQGL 60
           MSVSL+VM+FNLHDD P +SPNSW KR+D+C++VITSYSP +LCTQQGVK+QLD+LQQGL
Sbjct: 1   MSVSLSVMSFNLHDDLPEESPNSWLKRKDLCLTVITSYSPIVLCTQQGVKSQLDYLQQGL 60

Query: 61  PGYDQFGISRKGPQDSSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120
           P YDQFGISR GP D++DEHCTIF++KEKVELLEGGTFWLSESPSVPGS +WGS VPCIA
Sbjct: 61  PAYDQFGISRTGPGDANDEHCTIFFNKEKVELLEGGTFWLSESPSVPGSTAWGSAVPCIA 120

Query: 121 TWATFQLKGVELPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180
           TWATFQLKG E PGFSFQIVNTN+DE SPRARRRSALLTWQHIASLPP+LPVVYCGGFNT
Sbjct: 121 TWATFQLKGAEPPGFSFQIVNTNLDEISPRARRRSALLTWQHIASLPPTLPVVYCGGFNT 180

Query: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIF 240
           QKESTTGRFLLGRSREHGVVGDMRDAWPS+RVRKNV+LIRTYH FKG+KQGT+E+LKLIF
Sbjct: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNVALIRTYHDFKGDKQGTVEFLKLIF 240

Query: 241 RALCLCWDRQTQDLHIDWIFFRGRSLIPVSCEV 273
           RALCLCWDRQTQDLH DWI +RGRS++PV CE+
Sbjct: 241 RALCLCWDRQTQDLHTDWILYRGRSIVPVMCEI 273


>AT4G30900.1 | Symbols:  | DNAse I-like superfamily protein |
           chr4:15040021-15042203 FORWARD LENGTH=316
          Length = 316

 Score =  504 bits (1299), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 231/273 (84%), Positives = 257/273 (94%)

Query: 1   MSVSLTVMTFNLHDDQPPDSPNSWEKRRDICISVITSYSPFILCTQQGVKAQLDFLQQGL 60
           MSVSL+VM+FNLHDD P +SPNSW KR+D+C++VITSYSP +LCTQQGVK+QLD+LQQGL
Sbjct: 1   MSVSLSVMSFNLHDDLPEESPNSWLKRKDLCLTVITSYSPIVLCTQQGVKSQLDYLQQGL 60

Query: 61  PGYDQFGISRKGPQDSSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120
           P YDQFGISR GP D++DEHCTIF++KEKVELLEGGTFWLSESPSVPGS +WGS VPCIA
Sbjct: 61  PAYDQFGISRTGPGDANDEHCTIFFNKEKVELLEGGTFWLSESPSVPGSTAWGSAVPCIA 120

Query: 121 TWATFQLKGVELPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180
           TWATFQLKG E PGFSFQIVNTN+DE SPRARRRSALLTWQHIASLPP+LPVVYCGGFNT
Sbjct: 121 TWATFQLKGAEPPGFSFQIVNTNLDEISPRARRRSALLTWQHIASLPPTLPVVYCGGFNT 180

Query: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIF 240
           QKESTTGRFLLGRSREHGVVGDMRDAWPS+RVRKNV+LIRTYH FKG+KQGT+E+LKLIF
Sbjct: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNVALIRTYHDFKGDKQGTVEFLKLIF 240

Query: 241 RALCLCWDRQTQDLHIDWIFFRGRSLIPVSCEV 273
           RALCLCWDRQTQDLH DWI +RGRS++PV CE+
Sbjct: 241 RALCLCWDRQTQDLHTDWILYRGRSIVPVMCEI 273