Miyakogusa Predicted Gene

Lj4g3v1983490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983490.1 tr|G7JGQ4|G7JGQ4_MEDTR Eukaryotic translation
initiation factor 5A-1 OS=Medicago truncatula
GN=MTR_4,46.09,4e-18,eIF_5A: translation elongation factor
IF5A,Translation elongation factor IF5A;
IF5A_HYPUSINE,Transla,CUFF.50045.1
         (146 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13950.1 | Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A | eukar...   261   1e-70
AT1G69410.1 | Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongatio...   253   3e-68
AT1G26630.1 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic tr...   242   5e-65
AT1G26630.2 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic tr...   213   2e-56

>AT1G13950.1 | Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A |
           eukaryotic elongation factor 5A-1 | chr1:4773631-4774668
           FORWARD LENGTH=158
          Length = 158

 Score =  261 bits (666), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 125/146 (85%), Positives = 136/146 (93%), Gaps = 1/146 (0%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH F+S +D+GASKTYP QAGT RKNGYIVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           VAID+F  +KLEDIVPSSHNCDVPHVNRTDYQLIDISEDG+VSLLTDNG TKDDLKLP D
Sbjct: 60  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPND 119

Query: 121 ETLLAQIKDGFNEGKDLVVSVMSAMG 146
           +TLL QIK GF++GKDLVVSVMSAMG
Sbjct: 120 DTLLQQIKSGFDDGKDLVVSVMSAMG 145


>AT1G69410.1 | Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongation
           factor 5A-3 | chr1:26089301-26090194 FORWARD LENGTH=158
          Length = 158

 Score =  253 bits (646), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 121/146 (82%), Positives = 132/146 (90%), Gaps = 1/146 (0%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EH F+S +D+GASKTYP QAG  RK G+IVI+ RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           VAID+F  +KLEDIVPSSHNCDVPHVNR DYQLIDISEDGFVSLLTDNG TKDDLKLPTD
Sbjct: 60  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 119

Query: 121 ETLLAQIKDGFNEGKDLVVSVMSAMG 146
           E LL Q+K+GF EGKD+VVSVMSAMG
Sbjct: 120 EALLTQLKNGFEEGKDIVVSVMSAMG 145


>AT1G26630.1 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic
           translation initiation factor 5A-1 (eIF-5A 1) protein |
           chr1:9205968-9207098 FORWARD LENGTH=159
          Length = 159

 Score =  242 bits (618), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 115/146 (78%), Positives = 133/146 (91%), Gaps = 1/146 (0%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EH F++ ++SGASKTYP  AG  RK G+IVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           VAID+F  +KLEDIVPSSHNCDVPHVNR DYQLIDI+EDGFVSLLTD+GGTKDDLKLPTD
Sbjct: 60  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 119

Query: 121 ETLLAQIKDGFNEGKDLVVSVMSAMG 146
           + L AQ++ GF+EGKD+VVSVMS+MG
Sbjct: 120 DGLTAQMRLGFDEGKDIVVSVMSSMG 145


>AT1G26630.2 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic
           translation initiation factor 5A-1 (eIF-5A 1) protein |
           chr1:9205968-9207013 FORWARD LENGTH=138
          Length = 138

 Score =  213 bits (543), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 101/127 (79%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EH F++ ++SGASKTYP  AG  RK G+IVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           VAID+F  +KLEDIVPSSHNCDVPHVNR DYQLIDI+EDGFVSLLTD+GGTKDDLKLPTD
Sbjct: 60  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 119

Query: 121 ETLLAQI 127
           + L AQ+
Sbjct: 120 DGLTAQL 126