Miyakogusa Predicted Gene

Lj4g3v1983390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983390.1 Non Chatacterized Hit- tr|F6HUB5|F6HUB5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.99,3e-18,Broad-Complex, Tramtrack and Bric a brac,BTB/POZ-like;
POTASSIUM CHANNEL TETRAMERISATION DOMAIN-CONT,CUFF.50036.1
         (442 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G24240.1 | Symbols:  | BTB/POZ domain with WD40/YVTN repeat-l...   729   0.0  
AT4G30940.1 | Symbols:  | BTB/POZ domain with WD40/YVTN repeat-l...   712   0.0  
AT5G41330.1 | Symbols:  | BTB/POZ domain with WD40/YVTN repeat-l...    94   1e-19
AT3G09030.1 | Symbols:  | BTB/POZ domain-containing protein | ch...    86   5e-17

>AT2G24240.1 | Symbols:  | BTB/POZ domain with WD40/YVTN repeat-like
           protein | chr2:10310838-10312163 FORWARD LENGTH=441
          Length = 441

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/442 (77%), Positives = 387/442 (87%), Gaps = 1/442 (0%)

Query: 1   MGVQNDRVKFNVGGRVLETTATTLANAGRNSMLGAMLDENWDLLPDNGSVKFIDRNPDCF 60
           MG+  DR+KFNVGGR+ ETTATTLANAGR+S  GA+ D+ W+L P   S+ F+DRN DCF
Sbjct: 1   MGISKDRIKFNVGGRLFETTATTLANAGRDSFFGALFDDEWNLSPLEDSILFVDRNSDCF 60

Query: 61  AVLLDLLRTGELYIPPNLPEKLLYREALYYGVLDHVRTAKWGQFDGNRLRLSRSVQGQAP 120
           AVLLDLLRTG+L +P N+PE+LL+REA +YG+LDHVRTAKWG FDGNRLRLS SV+G AP
Sbjct: 61  AVLLDLLRTGDLNVPANIPERLLHREASFYGLLDHVRTAKWGPFDGNRLRLSDSVKGIAP 120

Query: 121 GDGTAIRAGPDGGCCVAHGSMVHVYNWMLDEHPPLNLDYQRVNDVGWVDPDNIVIGVSER 180
           GDGTAIRAGPDGGCCVAHGS+VHV++WML+EH P+NLDYQRVNDVGW+D DNIV+   E+
Sbjct: 121 GDGTAIRAGPDGGCCVAHGSVVHVFDWMLEEHSPINLDYQRVNDVGWIDSDNIVLSACEK 180

Query: 181 LGRGDGGMGLFTSHTGELRYKFQVSHENQVKSYTAGALSFSSDYKIFSSCKGRSNEYGVG 240
           LGRGDGGMGLF+S +G+LRYKFQV HENQVKSYTAGALSFS DY+IF+SCKGRSNEYG+G
Sbjct: 181 LGRGDGGMGLFSSSSGDLRYKFQVCHENQVKSYTAGALSFSPDYEIFASCKGRSNEYGIG 240

Query: 241 VWDQVTGKQIDFFYEPVGWSLGDADRLQWMEGSNCLLVATMFPRKDNCYISLLDFRQKRM 300
           VWDQ+TGKQ DFFYE  GWSLGDAD+LQW+ G NCLLVAT+FPRKDNCYISLLDFR K M
Sbjct: 241 VWDQITGKQTDFFYESPGWSLGDADKLQWLNGKNCLLVATLFPRKDNCYISLLDFRDKNM 300

Query: 301 VWCWSDVGAPLAVDEKRVRDAIAMEDNNSICVVNEFEDLGFMDLXXXXXXXXXXXXXXXL 360
           VW WSD+G+P+A+DEKRVRDAIAMED+NSICVVNEFEDLGF+DL               L
Sbjct: 301 VWSWSDIGSPMAIDEKRVRDAIAMEDSNSICVVNEFEDLGFIDL-RMYGGSVRWSSRSKL 359

Query: 361 MKGKMPEEPCYPKLALHGGQLFSSMNDCISVFCGPEWVLTSRLRRSYGGSICDFSIGGDR 420
           MK KMP+EPCYPKLALH GQLFSSMND ISVFCGP+WVLTSRLRRSYGGSICDFSIGGDR
Sbjct: 360 MKSKMPDEPCYPKLALHEGQLFSSMNDSISVFCGPDWVLTSRLRRSYGGSICDFSIGGDR 419

Query: 421 LFALHSEENVFDIWETPTPPII 442
           LFALHSEENVFD+WETP  PII
Sbjct: 420 LFALHSEENVFDVWETPPCPII 441


>AT4G30940.1 | Symbols:  | BTB/POZ domain with WD40/YVTN repeat-like
           protein | chr4:15055149-15056474 FORWARD LENGTH=441
          Length = 441

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/443 (76%), Positives = 384/443 (86%), Gaps = 3/443 (0%)

Query: 1   MGVQNDRVKFNVGGRVLETTATTLANAGRNSMLGAMLDENWDLLPDNGSVKFIDRNPDCF 60
           MG+ NDR+KFNVGGR+ ETTATTLANAGR+S  GA+ DENW+L    G + FIDRNPDCF
Sbjct: 1   MGLSNDRIKFNVGGRIFETTATTLANAGRDSFFGALFDENWNL-SQPGDL-FIDRNPDCF 58

Query: 61  AVLLDLLRTGELYIPPNLPEKLLYREALYYGVLDHVRTAKWGQFDGNRLRLSRSVQGQAP 120
           AVLLDLLRTG+L IPPN+PE+LL++EA++YG++DH+RTAKWG FDGNRL LSRSV G AP
Sbjct: 59  AVLLDLLRTGDLNIPPNIPERLLHKEAMFYGLIDHLRTAKWGPFDGNRLHLSRSVTGIAP 118

Query: 121 GDGTAIRAGPDGGCCVAHGSMVHVYNWMLDEHPPLNLDYQRVNDVGWVDPDNIVIGVSER 180
           GDGTAIRAGPDGGCC+AHGS+VHV++WML+EHP +NLDYQRVNDVGW+D  NIV+   ER
Sbjct: 119 GDGTAIRAGPDGGCCIAHGSVVHVFDWMLEEHPTINLDYQRVNDVGWIDSGNIVLSACER 178

Query: 181 LGRGDGGMGLFTSHTGELRYKFQVSHENQVKSYTAGALSFSSDYKIFSSCKGRSNEYGVG 240
           LGRGDGGMGLF+S +GELRYKFQVSH+NQVKSY+AGALSFS D KIF+SCKGRSNEYG+G
Sbjct: 179 LGRGDGGMGLFSSSSGELRYKFQVSHDNQVKSYSAGALSFSPDSKIFTSCKGRSNEYGIG 238

Query: 241 VWDQVTGKQIDFFYEPVGWSLGDADRLQWMEGSNCLLVATMFPRKDNCYISLLDFRQKRM 300
           VWDQ TGKQ+DFFYE  GWSLGDAD+LQW+ G NCLLVAT+FPRKDNCYISLLDFR+K M
Sbjct: 239 VWDQSTGKQVDFFYESPGWSLGDADKLQWLSGKNCLLVATLFPRKDNCYISLLDFREKNM 298

Query: 301 VWCWSDVGAPLAVDEKRVRDAIAMEDNNSICVVNEFEDLGFMDLXXX-XXXXXXXXXXXX 359
           VW WSD+G     +EKRVRDAIAME++NSICVVNEFEDLGF+DL                
Sbjct: 299 VWSWSDIGFLTMAEEKRVRDAIAMEESNSICVVNEFEDLGFIDLRMDGGGSSVRWSSRSR 358

Query: 360 LMKGKMPEEPCYPKLALHGGQLFSSMNDCISVFCGPEWVLTSRLRRSYGGSICDFSIGGD 419
           LMK KMP+EPCYPKLALH GQLFSSMND ISVFCG +WVLTSRL+RSYGGSICDFSIGGD
Sbjct: 359 LMKSKMPDEPCYPKLALHEGQLFSSMNDSISVFCGSDWVLTSRLKRSYGGSICDFSIGGD 418

Query: 420 RLFALHSEENVFDIWETPTPPII 442
           RLFALHSEENVFD+WET  PPII
Sbjct: 419 RLFALHSEENVFDVWETLPPPII 441


>AT5G41330.1 | Symbols:  | BTB/POZ domain with WD40/YVTN repeat-like
           protein | chr5:16536452-16537828 REVERSE LENGTH=458
          Length = 458

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 150/337 (44%), Gaps = 62/337 (18%)

Query: 4   QNDRVKFNVGGRVLETTATTLANAGRNSMLGAMLDENWDLLPDNGSVKFIDRNPDCFAVL 63
           +++ V  NVGGR+ +TT  TL+ AG +S+L  +  E         + +F+DR+PD F+VL
Sbjct: 9   ESNVVSINVGGRIFQTTKQTLSLAGTDSLLSQLATE---------TTRFVDRDPDLFSVL 59

Query: 64  LDLLRTGELYIPPNLPEKL-------LYREALYYGVLDHV--RTAKWGQFDGNRLRLSRS 114
           L +LRTG      NLP +        L  E+ YYG+   +    +   QF+   LR SR 
Sbjct: 60  LYILRTG------NLPARSRAFDVRDLIDESRYYGIESFLIDSLSNSSQFEPFDLRRSRI 113

Query: 115 VQGQAPGDGTAIRAGP-DGGCCVAHGSMVHVYNWMLDEHPPLNLDYQRVNDVGWVDPDNI 173
           +Q       ++I      GG  VAHGS +  ++W L +   +  ++  V+ +  + P  +
Sbjct: 114 LQLNGRDSPSSISPTVIGGGLHVAHGSKITSFDWSLRQKSTVLTNFSAVDSLLEISPGVL 173

Query: 174 VIGVSERLGRGDGGMGLFTSHTGELRYKFQVSHENQVK-SYTAGALSFSSDYKIFSSCKG 232
             G ++       G+ +     G    +  ++ EN  + S T  A+  S ++   S    
Sbjct: 174 AAGATDF-----PGLQIIDLDNGGF-VRTTLNWENVTRSSSTVQAIGSSHEFLFTSFESS 227

Query: 233 RSNEYGVGVWD-------------QVTGKQIDFFYEPVGWSLGDADRLQWMEGSNCLLV- 278
           R N   + V+D             ++ G  ID        S   + +L+W++  N L+V 
Sbjct: 228 RRNSNSIMVYDLSSLLPVSEIDHCEIYGADID--------SAIPSTKLKWIQSCNLLMVS 279

Query: 279 -ATMFPRKDNCYISLLDFRQKRMVW-------CWSDV 307
            +   P   N +I   D R + MVW       C+SDV
Sbjct: 280 GSHTSPSGVNGHIRFWDVRSRNMVWEIKEAQDCFSDV 316


>AT3G09030.1 | Symbols:  | BTB/POZ domain-containing protein |
           chr3:2754841-2756223 FORWARD LENGTH=460
          Length = 460

 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 185/462 (40%), Gaps = 48/462 (10%)

Query: 7   RVKFNVGGRVLETTATTLANAGRNSMLGAMLDENWDLLPDNGSVKFIDRNPDCFAVLLDL 66
           RVK NVGG + ET A+T+ ++  +S+L A+            +  FIDR+P+ FAV+L+L
Sbjct: 9   RVKLNVGGEIFETNASTIQSSCPDSLLAALSTST----SHGSNPVFIDRDPEIFAVILNL 64

Query: 67  LRTGELYIPPN----LPEKLLYREALYYGVLDHVRTAKWGQ----FDGNRLRLSRSVQGQ 118
           LRTG L  P N      ++ L  EA+YYGV   +R A        FD +   L  ++   
Sbjct: 65  LRTGRL--PANSSGVFSKQELLDEAMYYGVESLLRLAMLPPPLLGFDAS---LVSTIVPA 119

Query: 119 APGDGTAIRA-GPDGGCCVAHGSMVHVYNWMLDEHPPLNLDYQRVNDVG--WVDPDNIVI 175
           A G  +A+ A   D    +AHG  + VY+W L     +      +  +   W +   I  
Sbjct: 120 ADGVPSALTATAGDASLWIAHGGQISVYDWSLSHAGTVRTHLNDITSICRVWGEAAAIGS 179

Query: 176 GVSERLGRGDGGMGLFTSHTGELRYKFQVSHENQVKSYTAGALSFSSDYKIFSSCKGRSN 235
           G +  L   D   G +   T     +    H+ +V +         S+  +F+S      
Sbjct: 180 GSASGLHFYDLSGGRYIGSTHWTDPEDPRIHKARVAAVA------DSEGGVFASFDCLHR 233

Query: 236 EYGVGVWDQVTGKQIDFFYEPVGWSLGDA--DRLQWMEGSNCLLVATMFPRKDNC--YIS 291
           E  V   D+ T +      +  G S      ++L+W+     L+ + +      C  YI 
Sbjct: 234 ENSVLQIDKSTLQVAAVIGQQSGNSAKTTVPEKLRWLPAKGLLVGSAVQRGVFGCSGYIR 293

Query: 292 LLDFRQKRMVWCWSDVGAPLAVDEKRVRDAIA-----MEDNNSICVVNEFEDLGFMDLXX 346
           + D R + +VW   +   P +    R  DA+A     +ED+    V ++  DLG  D+  
Sbjct: 294 IWDPRSRNIVW---ETNEPGSGRSTRFGDALADMDVDVEDSILFKVCSKSGDLGMADIRK 350

Query: 347 XXXXXXXXXXXXXLMKGKMPEEPCYPKLALHGGQLFSSMNDCISVFCG-PEWVLTSRLRR 405
                            K  +   Y  +  +  Q+ ++    + V+    E      +RR
Sbjct: 351 LGEDPWVYMSDENPGAWKAGDGGGYSVVHCYRKQVLAARGGALEVWSSVKEKTSGDPIRR 410

Query: 406 ---------SYGGSICDFSIGGDRLFALHSEENVFDIWETPT 438
                    S  G I     GGDRLF         ++WET +
Sbjct: 411 RNFVDKEDDSKRGMISKIEAGGDRLFVSRECMEGVEVWETSS 452