Miyakogusa Predicted Gene
- Lj4g3v1983380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1983380.1 Non Chatacterized Hit- tr|I1JGN9|I1JGN9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.07,0,FA_desaturase,Fatty acid desaturase, type 1; seg,NULL;
FATTY ACID DESATURASE 2,NULL,CUFF.50037.1
(441 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G30950.1 | Symbols: FAD6, FADC, SFD4 | fatty acid desaturase ... 671 0.0
AT3G11170.1 | Symbols: FAD7, FADD | fatty acid desaturase 7 | ch... 110 2e-24
AT2G29980.1 | Symbols: FAD3 | fatty acid desaturase 3 | chr2:127... 107 2e-23
AT5G05580.1 | Symbols: FAD8 | fatty acid desaturase 8 | chr5:166... 106 3e-23
AT5G05580.2 | Symbols: FAD8 | fatty acid desaturase 8 | chr5:166... 100 2e-21
AT3G12120.2 | Symbols: FAD2 | fatty acid desaturase 2 | chr3:386... 93 3e-19
AT3G12120.1 | Symbols: FAD2 | fatty acid desaturase 2 | chr3:386... 93 3e-19
AT2G29980.2 | Symbols: FAD3 | fatty acid desaturase 3 | chr2:127... 79 4e-15
>AT4G30950.1 | Symbols: FAD6, FADC, SFD4 | fatty acid desaturase 6 |
chr4:15057278-15059673 REVERSE LENGTH=448
Length = 448
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/447 (71%), Positives = 369/447 (82%), Gaps = 8/447 (1%)
Query: 1 MACTLADSLLLFKGSQQ----KPALRRSIAAQCSPSIFNIKVDGLIHKGFRHQ--RHLIP 54
MA +ADSL F G QQ P L S +A+ SP ++ +K L+ KG H+ R + P
Sbjct: 1 MASRIADSLFAFTGPQQCLPRVPKLAAS-SARVSPGVYAVKPIDLLLKGRTHRSRRCVAP 59
Query: 55 -RNKXXXXXXXXXXXXXXXXXXXXYRKQLAESYGFRKIGEDLPDNVTLKDVISSLPKKVF 113
+ + R+QLAESYGFR+IGEDLP+NVTLKD++ +LPK+VF
Sbjct: 60 VKRRIGCIKAVAAPVAPPSADSAEDREQLAESYGFRQIGEDLPENVTLKDIMDTLPKEVF 119
Query: 114 EIDDVKAWKTVLISATSYALGLFMISKAPWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFS 173
EIDD+KA K+VLIS TSY LGLFMI+K+PWYLLPLAWAWTGTA+TGFFVIGHDCAHKSFS
Sbjct: 120 EIDDLKALKSVLISVTSYTLGLFMIAKSPWYLLPLAWAWTGTAITGFFVIGHDCAHKSFS 179
Query: 174 TNKLVEDIVGTLAFLPLIYPYEPWRFKHDKHHAKTNMLNEDTAWNPVSKDEFDSDPLLRK 233
NKLVEDIVGTLAFLPL+YPYEPWRFKHD+HHAKTNML DTAW PV +EF+S P++RK
Sbjct: 180 KNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHDTAWQPVPPEEFESSPVMRK 239
Query: 234 AIIYGYGPIRCWMSVAHWLLLHFDLKKFRPNEVKRVKISLACVFAFIGIGWPLIIYKTGI 293
AII+GYGPIR W+S+AHW+ HF+LKKFR +EV RVKISLACVFAF+ +GWPLI+YK GI
Sbjct: 240 AIIFGYGPIRPWLSIAHWVNWHFNLKKFRASEVNRVKISLACVFAFMAVGWPLIVYKVGI 299
Query: 294 MGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKDSEKWNAAQAQLNGTVHCDYPQWIEI 353
+GW+KFWLMPWLGYHFWMSTFTMVHHTAPHIPFK +++WNAAQAQLNGTVHCDYP WIEI
Sbjct: 300 LGWVKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWNAAQAQLNGTVHCDYPSWIEI 359
Query: 354 LCHDINVHIPHHISPRIPSYNLRAAHKSLQENWGKYLNEASWNWRLMKTIMTVCHVYDKE 413
LCHDINVHIPHHISPRIPSYNLRAAH+S+QENWGKY N A+WNWRLMKTIMTVCHVYDKE
Sbjct: 360 LCHDINVHIPHHISPRIPSYNLRAAHESIQENWGKYTNLATWNWRLMKTIMTVCHVYDKE 419
Query: 414 QNYVAFDELAPEDSQPIKFLKNVMPDY 440
+NY+ FD LAPE+SQPI FLK MP+Y
Sbjct: 420 ENYIPFDRLAPEESQPITFLKKAMPNY 446
>AT3G11170.1 | Symbols: FAD7, FADD | fatty acid desaturase 7 |
chr3:3499959-3502126 FORWARD LENGTH=446
Length = 446
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 153/345 (44%), Gaps = 22/345 (6%)
Query: 89 RKIGEDLPDNVTLKDVISSLPKKVFEIDDVKAWKTVLIS-ATSYALGLFMISKAPWYLLP 147
++ P L D+ +++PK + + K+ V+ A +AL W + P
Sbjct: 86 QRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWP 145
Query: 148 LAWAWTGTAVTGFFVIGHDCAHKSFSTNKLVEDIVGTLAFLPLIYPYEPWRFKHDKHHAK 207
L W GT FV+GHDC H SFS + + +VG L ++ PY WR H HH
Sbjct: 146 LYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQN 205
Query: 208 TNMLNEDTAWNPVSKDEFDS-DPLLR------KAIIYGYGPIRCWMSV-----AHWLLLH 255
+ D +W+P+S+ +++ D R ++ Y P W +H+ H
Sbjct: 206 HGHVENDESWHPMSEKIYNTLDKPTRFFRFTLPLVMLAY-PFYLWARSPGKKGSHY---H 261
Query: 256 FDLKKFRPNEVKRVKISLACVFAFIGIGWPLIIYKTGIMGWIKFWLMPWLGYHFWMSTFT 315
D F P E K V S AC A + + + G + +K + +P+ W+ T
Sbjct: 262 PDSDLFLPKERKDVLTSTACWTAMAAL-LVCLNFTIGPIQMLKLYGIPYWINVMWLDFVT 320
Query: 316 MVHHTA--PHIPFKDSEKWNAAQAQLNGTVHCDYPQWIEILCHDINVHIPHHISPRIPSY 373
+HH +P+ ++W+ + L T+ DY I + HDI H+ HH+ P+IP Y
Sbjct: 321 YLHHHGHEDKLPWYRGKEWSYLRGGLT-TLDRDY-GLINNIHHDIGTHVIHHLFPQIPHY 378
Query: 374 NLRAAHKSLQENWGKYLNEASWNWRLMKTIMTVCHVYDKEQNYVA 418
+L A ++ + GKY E + L ++ + KE +YV+
Sbjct: 379 HLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVS 423
>AT2G29980.1 | Symbols: FAD3 | fatty acid desaturase 3 |
chr2:12781787-12784946 REVERSE LENGTH=386
Length = 386
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 15/261 (5%)
Query: 143 WYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSTNKLVEDIVGTLAFLPLIYPYEPWRFKHD 202
W+L PL WA GT FV+GHDC H SFS L+ +VG + ++ PY WR H
Sbjct: 79 WFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHR 138
Query: 203 KHHAKTNMLNEDTAWNPVSKDEFDSDP----LLRKAI---IYGYGPIRCWMSVAHWLLLH 255
HH + D +W P+ + + P +LR + + Y C+ S H
Sbjct: 139 THHQNHGHVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGK-EGSH 197
Query: 256 FD--LKKFRPNEVKRVKISLACVFAFIGIGWPLIIYKTGIMGWIKFWLMPWLGYHFWMST 313
F+ F P+E K + S C ++ + + + + G + +K + +P++ + W+
Sbjct: 198 FNPYSSLFAPSERKLIATSTTC-WSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDA 256
Query: 314 FTMVHHTA--PHIPFKDSEKWNAAQAQLNGTVHCDYPQWIEILCHDINVHIPHHISPRIP 371
T +HH +P+ ++W+ + L T+ DY + I HDI H+ HH+ P+IP
Sbjct: 257 VTYLHHHGHDEKLPWYRGKEWSYLRGGLT-TIDRDYGIFNNI-HHDIGTHVIHHLFPQIP 314
Query: 372 SYNLRAAHKSLQENWGKYLNE 392
Y+L A K+ + G+Y E
Sbjct: 315 HYHLVDATKAAKHVLGRYYRE 335
>AT5G05580.1 | Symbols: FAD8 | fatty acid desaturase 8 |
chr5:1664331-1666345 FORWARD LENGTH=435
Length = 435
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 139/314 (44%), Gaps = 26/314 (8%)
Query: 96 PDNVTLKDVISSLPKKVFEIDDVKAWKTVLISATSYALGLFMISK--APWYLLPLAWAWT 153
P L D+ +++PK + + + + ++ + GL ++ W L PL W
Sbjct: 86 PPPFNLADIRAAIPKHCW-VKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQ 144
Query: 154 GTAVTGFFVIGHDCAHKSFSTNKLVEDIVGTLAFLPLIYPYEPWRFKHDKHHAKTNMLNE 213
GT FV+GHDC H SFS + + + G L ++ PY WR H HH +
Sbjct: 145 GTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVEN 204
Query: 214 DTAWNPVSKDEFDSDPLLRKAIIYGYG--------PIRCWMSVAHWLLLHF--DLKKFRP 263
D +W+P+ + + + L + ++ + P W H+ D F P
Sbjct: 205 DESWHPLPESIYKN--LEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLP 262
Query: 264 NEVKRVKISLACVFAFIGIGWPLIIYKTGIMGWI---KFWLMPWLGYHFWMSTFTMVHHT 320
E K V S AC A L++ +MG I K + +P+ + W+ T +HH
Sbjct: 263 KEKKDVLTSTACWTAMAA----LLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHH 318
Query: 321 A--PHIPFKDSEKWNAAQAQLNGTVHCDYPQWIEILCHDINVHIPHHISPRIPSYNLRAA 378
+P+ ++W+ + L T+ DY WI + HDI H+ HH+ P+IP Y+L A
Sbjct: 319 GHEDKLPWYRGKEWSYLRGGLT-TLDRDY-GWINNIHHDIGTHVIHHLFPQIPHYHLVEA 376
Query: 379 HKSLQENWGKYLNE 392
++ + GKY E
Sbjct: 377 TEAAKPVLGKYYRE 390
>AT5G05580.2 | Symbols: FAD8 | fatty acid desaturase 8 |
chr5:1664331-1666190 FORWARD LENGTH=382
Length = 382
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 26/307 (8%)
Query: 89 RKIGEDLPDNVTLKDVISSLPKKVFEIDDVKAWKTVLISATSYALGLFMISK--APWYLL 146
+ P L D+ +++PK + + + + ++ + GL ++ W L
Sbjct: 79 ERFDPGAPPPFNLADIRAAIPKHCW-VKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLW 137
Query: 147 PLAWAWTGTAVTGFFVIGHDCAHKSFSTNKLVEDIVGTLAFLPLIYPYEPWRFKHDKHHA 206
PL W GT FV+GHDC H SFS + + + G L ++ PY WR H HH
Sbjct: 138 PLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQ 197
Query: 207 KTNMLNEDTAWNPVSKDEFDSDPLLRKAIIYGYG--------PIRCWMSVAHWLLLHF-- 256
+ D +W+P+ + + + L + ++ + P W H+
Sbjct: 198 NHGHVENDESWHPLPESIYKN--LEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHP 255
Query: 257 DLKKFRPNEVKRVKISLACVFAFIGIGWPLIIYKTGIMGWI---KFWLMPWLGYHFWMST 313
D F P E K V S AC A L++ +MG I K + +P+ + W+
Sbjct: 256 DSDLFLPKEKKDVLTSTACWTAMAA----LLVCLNFVMGPIQMLKLYGIPYWIFVMWLDF 311
Query: 314 FTMVHHTAPH--IPFKDSEKWNAAQAQLNGTVHCDYPQWIEILCHDINVHIPHHISPRIP 371
T +HH +P+ ++W+ + L T+ DY WI + HDI H+ HH+ P+IP
Sbjct: 312 VTYLHHHGHEDKLPWYRGKEWSYLRGGLT-TLDRDY-GWINNIHHDIGTHVIHHLFPQIP 369
Query: 372 SYNLRAA 378
Y+L A
Sbjct: 370 HYHLVEA 376
>AT3G12120.2 | Symbols: FAD2 | fatty acid desaturase 2 |
chr3:3860592-3861743 REVERSE LENGTH=383
Length = 383
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 139/302 (46%), Gaps = 25/302 (8%)
Query: 107 SLPKKV-FEIDDVKAWKTVLISATSYALGLFMISKAPWYLL--PLAWAWTGTAVTGFFVI 163
S+P+ + I D+ AT+Y F + P L PL WA G +TG +VI
Sbjct: 48 SIPRSFSYLISDIIIASCFYYVATNY----FSLLPQPLSYLAWPLYWACQGCVLTGIWVI 103
Query: 164 GHDCAHKSFSTNKLVEDIVGTLAFLPLIYPYEPWRFKHDKHHAKTNMLNEDTAWNPVSKD 223
H+C H +FS + ++D VG + L+ PY W++ H +HH+ T L D + P K
Sbjct: 104 AHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKS 163
Query: 224 ------EFDSDPLLRKAII---YGYG-PIRCWMSVA----HWLLLHFDLKKFRPNEVKRV 269
++ ++PL R ++ + G P+ +V+ HF N+ +R+
Sbjct: 164 AIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERL 223
Query: 270 KISLACVFAFIGIGWPLIIYKT--GIMGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFK 327
+I L+ + + + L Y G+ I + +P L + ++ T + HT P +P
Sbjct: 224 QIYLSDA-GILAVCFGLYRYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHY 282
Query: 328 DSEKWNAAQAQLNGTVHCDYPQWIEILCHDINVHIPHHISPRIPSYNLRAAHKSLQENWG 387
DS +W+ + L TV DY ++ + + H+ HH+ +P YN A K+++ G
Sbjct: 283 DSSEWDWLRGAL-ATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILG 341
Query: 388 KY 389
Y
Sbjct: 342 DY 343
>AT3G12120.1 | Symbols: FAD2 | fatty acid desaturase 2 |
chr3:3860592-3861743 REVERSE LENGTH=383
Length = 383
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 139/302 (46%), Gaps = 25/302 (8%)
Query: 107 SLPKKV-FEIDDVKAWKTVLISATSYALGLFMISKAPWYLL--PLAWAWTGTAVTGFFVI 163
S+P+ + I D+ AT+Y F + P L PL WA G +TG +VI
Sbjct: 48 SIPRSFSYLISDIIIASCFYYVATNY----FSLLPQPLSYLAWPLYWACQGCVLTGIWVI 103
Query: 164 GHDCAHKSFSTNKLVEDIVGTLAFLPLIYPYEPWRFKHDKHHAKTNMLNEDTAWNPVSKD 223
H+C H +FS + ++D VG + L+ PY W++ H +HH+ T L D + P K
Sbjct: 104 AHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKS 163
Query: 224 ------EFDSDPLLRKAII---YGYG-PIRCWMSVA----HWLLLHFDLKKFRPNEVKRV 269
++ ++PL R ++ + G P+ +V+ HF N+ +R+
Sbjct: 164 AIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERL 223
Query: 270 KISLACVFAFIGIGWPLIIYKT--GIMGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFK 327
+I L+ + + + L Y G+ I + +P L + ++ T + HT P +P
Sbjct: 224 QIYLSDA-GILAVCFGLYRYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHY 282
Query: 328 DSEKWNAAQAQLNGTVHCDYPQWIEILCHDINVHIPHHISPRIPSYNLRAAHKSLQENWG 387
DS +W+ + L TV DY ++ + + H+ HH+ +P YN A K+++ G
Sbjct: 283 DSSEWDWLRGAL-ATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILG 341
Query: 388 KY 389
Y
Sbjct: 342 DY 343
>AT2G29980.2 | Symbols: FAD3 | fatty acid desaturase 3 |
chr2:12782257-12784946 REVERSE LENGTH=288
Length = 288
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 11/186 (5%)
Query: 143 WYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSTNKLVEDIVGTLAFLPLIYPYEPWRFKHD 202
W+L PL WA GT FV+GHDC H SFS L+ +VG + ++ PY WR H
Sbjct: 79 WFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHR 138
Query: 203 KHHAKTNMLNEDTAWNPVSKDEFDSDP----LLRKAI---IYGYGPIRCWMSVAHWLLLH 255
HH + D +W P+ + + P +LR + + Y C+ S H
Sbjct: 139 THHQNHGHVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGK-EGSH 197
Query: 256 FD--LKKFRPNEVKRVKISLACVFAFIGIGWPLIIYKTGIMGWIKFWLMPWLGYHFWMST 313
F+ F P+E K + S C ++ + + + + G + +K + +P++ + W+
Sbjct: 198 FNPYSSLFAPSERKLIATSTTC-WSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDA 256
Query: 314 FTMVHH 319
T +HH
Sbjct: 257 VTYLHH 262