Miyakogusa Predicted Gene

Lj4g3v1957770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1957770.1 tr|G7JGM0|G7JGM0_MEDTR Calcium binding
atopy-related autoantigen OS=Medicago truncatula
GN=MTR_4g116,78.66,0,EF-hand,NULL; EF_HAND_2,EF-HAND 2;
EF_hand_6,NULL; EF_hand_5,NULL; EF_hand_3,EF-hand-like domain;
CA,CUFF.49981.1
         (464 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32060.1 | Symbols:  | calcium-binding EF hand family protein...   507   e-144
AT4G32060.2 | Symbols:  | calcium-binding EF hand family protein...   450   e-126

>AT4G32060.1 | Symbols:  | calcium-binding EF hand family protein |
           chr4:15501134-15503321 FORWARD LENGTH=498
          Length = 498

 Score =  507 bits (1306), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 237/341 (69%), Positives = 291/341 (85%), Gaps = 2/341 (0%)

Query: 97  SKFLFNDGYRRRVFFNYEKRIRLQSPPEKVFEYFATVRTPSGEVFMTPADLMRAIVPVFP 156
           S F+F D YRR++FFNYEKR+RLQSPPEKVFEYFA+VRT  GE+ M PADLMRAIVPVFP
Sbjct: 130 SGFIFGDAYRRKIFFNYEKRLRLQSPPEKVFEYFASVRTDKGEILMKPADLMRAIVPVFP 189

Query: 157 PSESNRVREGFLRGEQVPGQLQCEPSDFFMLFDTNSDGLISFPEYIFFVTLLSIPESSFS 216
           PSES+ VREG+L GE+ PG+L+C PS+FFMLFD ++DGLISF EYIFFVTLLSIPESSF+
Sbjct: 190 PSESHLVREGYLTGERNPGELRCSPSEFFMLFDVDNDGLISFKEYIFFVTLLSIPESSFA 249

Query: 217 VAFKMFDIDNNGEIDKQEFKKVMALMRSQNRQGANHRDGRRLGV--KSSIENGGLLEYFF 274
           VAFKMFD DNNGEIDK+EFK VM+LMRSQ+RQG  HRDG R G+    S+E+GGL+EYFF
Sbjct: 250 VAFKMFDTDNNGEIDKEEFKTVMSLMRSQHRQGVGHRDGLRTGLHMTGSVEDGGLVEYFF 309

Query: 275 GKDGNACLQHGRFVEFLRHLHDEILRLEFSHYDYNKKGTISAKDFALSLVASADINHINK 334
           GKDG+  L+H +F +F++ L +E+LRLEF+HYDY ++G+ISAKDFALS+VA+AD +H++K
Sbjct: 310 GKDGSQKLKHDKFTKFMKDLTEEMLRLEFAHYDYKRRGSISAKDFALSMVAAADASHLSK 369

Query: 335 LLDRVEELSSDQHLRDIRITYEEFQAFAELRKKLQSFSLALFSYGKINGVLTKNDFQRAA 394
           LLDRVE LS   HLRD+RI+ +EF+ F ELR KL  FSLALF+YGK NG+LT  DF+RAA
Sbjct: 370 LLDRVESLSEHPHLRDMRISLKEFKQFDELRSKLGPFSLALFAYGKANGLLTMKDFKRAA 429

Query: 395 SQVCGICVTDKVVDIIFHVFDANRDGNLSASEFVRVIQRRE 435
           SQVCGI ++D V++I FHVFD+N+DGNLS  EF+RV+ RRE
Sbjct: 430 SQVCGITLSDNVIEIAFHVFDSNQDGNLSVDEFLRVLHRRE 470


>AT4G32060.2 | Symbols:  | calcium-binding EF hand family protein |
           chr4:15501134-15503302 FORWARD LENGTH=454
          Length = 454

 Score =  450 bits (1157), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 213/305 (69%), Positives = 259/305 (84%), Gaps = 2/305 (0%)

Query: 97  SKFLFNDGYRRRVFFNYEKRIRLQSPPEKVFEYFATVRTPSGEVFMTPADLMRAIVPVFP 156
           S F+F D YRR++FFNYEKR+RLQSPPEKVFEYFA+VRT  GE+ M PADLMRAIVPVFP
Sbjct: 130 SGFIFGDAYRRKIFFNYEKRLRLQSPPEKVFEYFASVRTDKGEILMKPADLMRAIVPVFP 189

Query: 157 PSESNRVREGFLRGEQVPGQLQCEPSDFFMLFDTNSDGLISFPEYIFFVTLLSIPESSFS 216
           PSES+ VREG+L GE+ PG+L+C PS+FFMLFD ++DGLISF EYIFFVTLLSIPESSF+
Sbjct: 190 PSESHLVREGYLTGERNPGELRCSPSEFFMLFDVDNDGLISFKEYIFFVTLLSIPESSFA 249

Query: 217 VAFKMFDIDNNGEIDKQEFKKVMALMRSQNRQGANHRDGRRLGV--KSSIENGGLLEYFF 274
           VAFKMFD DNNGEIDK+EFK VM+LMRSQ+RQG  HRDG R G+    S+E+GGL+EYFF
Sbjct: 250 VAFKMFDTDNNGEIDKEEFKTVMSLMRSQHRQGVGHRDGLRTGLHMTGSVEDGGLVEYFF 309

Query: 275 GKDGNACLQHGRFVEFLRHLHDEILRLEFSHYDYNKKGTISAKDFALSLVASADINHINK 334
           GKDG+  L+H +F +F++ L +E+LRLEF+HYDY ++G+ISAKDFALS+VA+AD +H++K
Sbjct: 310 GKDGSQKLKHDKFTKFMKDLTEEMLRLEFAHYDYKRRGSISAKDFALSMVAAADASHLSK 369

Query: 335 LLDRVEELSSDQHLRDIRITYEEFQAFAELRKKLQSFSLALFSYGKINGVLTKNDFQRAA 394
           LLDRVE LS   HLRD+RI+ +EF+ F ELR KL  FSLALF+YGK NG+LT  DF+RAA
Sbjct: 370 LLDRVESLSEHPHLRDMRISLKEFKQFDELRSKLGPFSLALFAYGKANGLLTMKDFKRAA 429

Query: 395 SQVCG 399
           SQ  G
Sbjct: 430 SQREG 434