Miyakogusa Predicted Gene

Lj4g3v1881760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1881760.1 CUFF.49923.1
         (1044 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1 | Symbols:  | BED zinc finger ;hAT family dimerisati...   739   0.0  
AT1G18560.1 | Symbols:  | BED zinc finger ;hAT family dimerisati...    91   5e-18

>AT3G42170.1 | Symbols:  | BED zinc finger ;hAT family dimerisation
            domain | chr3:14321838-14323928 FORWARD LENGTH=696
          Length = 696

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/523 (63%), Positives = 421/523 (80%), Gaps = 21/523 (4%)

Query: 508  SEEPTPETQPSKRRKRKSIVWDHFTIETVSAGCRRACCKQCNQSFAYSTGSKVAGTSHLK 567
            +E  +PETQP KRRK+KS+VW+HFTIE V   CRRA CK CNQSFAYS G+KVAGTSHLK
Sbjct: 51   TEMVSPETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVAGTSHLK 110

Query: 568  RHIAKGTCSSLLRQN-------QSSPYTPRVRGSGAGNTSTISNAPKRRYRSPN--TPYI 618
            RHI KGTC +L+  +        S+PYTP+            ++ P+RRYRS N  +PY+
Sbjct: 111  RHIFKGTCPALIHTHDNDNNPLMSTPYTPK------------TDTPRRRYRSQNNASPYV 158

Query: 619  IFDQDRCRHEIARMIIMHDYPLHMVEHPGFVAFVQNLQPQFNMVTFNTVQGDCVATYLME 678
             F+QD+CR EIA+MIIMHDYPLHMV+HPGFV+FVQ++QP F+ V+FN VQGDCVATYL E
Sbjct: 159  AFNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVSFNNVQGDCVATYLAE 218

Query: 679  KQNLMKYFEGVPGRLCLTLDVWTSSQSVGYVFITGHFVDSDWKLQRRILNVVMEPYPDSD 738
            KQN+MK  EG+PGR CLTLD WTS  ++GYVFIT H++DSDWK+Q+++LNV+ME YP++D
Sbjct: 219  KQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYPEAD 278

Query: 739  SAISHAVAVCLSDWNIEGRLFSITCNHALSESALGNLRSLLSVKNPLILNGQLLVGHCIA 798
             A+S AVA C+S+W +EG+LF++T NH  S SA+ N+R  L +KNP IL+GQL++G+C+A
Sbjct: 279  EALSLAVANCVSEWGLEGKLFNVTFNHPASNSAVENIRPQLCIKNPGILDGQLVIGNCVA 338

Query: 799  RTLSNVANDLLSAVEGIVKKIRDSVKFVKTSESHEEKFLELKQQLQVPSERSLFIDDQTQ 858
            RT  ++A D+L   + ++K IRDSVK VKTSESHEE+F ELK+QLQVPSE+ L +DDQTQ
Sbjct: 339  RTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFTELKEQLQVPSEKVLSLDDQTQ 398

Query: 859  WNTTYQMLVAASELKEVFSCLDTSDPDYKGAPSMQDWKLVESLCTYLKPLYDAANILTPT 918
            WNTTY MLVAASELKEVFSCLDT+DPDYK  PS +DW+ VE+LCT+LKPL++A + L  T
Sbjct: 399  WNTTYMMLVAASELKEVFSCLDTADPDYKKPPSAEDWRHVEALCTFLKPLFEAVSTLQST 458

Query: 919  THPTAITFFHEVWKLQLDMSRAVMNEDPFIGNLTKPMQEKIDKYWRDCNLILALAVVMDP 978
             +P+A+TFFHEVWK Q D+SRA+  EDPF+  + K MQEK+DKYWRDC+L+LA+AVVMDP
Sbjct: 459  GNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVMDP 518

Query: 979  RFKMKLVEFSFTKIYGDGAHEYVKIVDEGIHELFHEYASLPLP 1021
            RFKMKLVEFSF+KI+G+ A + +K VD+GIHELF EY +LP P
Sbjct: 519  RFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHELFTEYMALPSP 561


>AT1G18560.1 | Symbols:  | BED zinc finger ;hAT family dimerisation
           domain | chr1:6385614-6388005 FORWARD LENGTH=690
          Length = 690

 Score = 90.9 bits (224), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/354 (21%), Positives = 155/354 (43%), Gaps = 29/354 (8%)

Query: 517 PSKRRKRKSIVWDHFTIETVSAGCRRACCKQCNQSFAYSTGSKVAGTSHLKRHIAKGTCS 576
           P KR+K  + V+  +      +  R+  CK C QS++ +T +   G     RH      +
Sbjct: 46  PPKRKKTMTSVYLKYFETAPDSKTRK--CKFCGQSYSIATATGNLGRHLTNRHPGYDKAA 103

Query: 577 SLLRQNQSSPYTPRVRGSGAGNTSTISNAPKRRYRSPNTPYIIFDQDRCRHEIARMIIMH 636
           + +  + S P TP            +    + + + P       D D     + + + + 
Sbjct: 104 ADVVTSSSVPQTP----------PAVVKPSQSQSKVPQ-----LDYDHLNWLVLKWLALS 148

Query: 637 DYPLHMVEHPGFVAFVQNLQPQFNMVTFNTVQGDCVATYLMEKQNLMKYFEGVPGRLCLT 696
             P   V+        + L+P   +      +      +   + ++    E +  ++ +T
Sbjct: 149 SLPPSTVDETWLGNSFKFLKPSIQLWPAEKYKAILDEVFTSMRGDVKTTLEHIQSKVSVT 208

Query: 697 LDVWTSSQSVGYVFITGHFVDSDWKLQRRILNVVMEPYPDSDSAISHAVAVCLSDWNIEG 756
           L  W S +++ Y+ +TG ++D +W   R +L++   PYP   S I +++   L  + IE 
Sbjct: 209 LSFWNSYENIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKTYAIED 268

Query: 757 RLFSITCNHALSESALGNLRSLLSVKNPLILNGQLLVGHCI----ARTLSNVANDLLSAV 812
           R+  + C H  SE+A+    SL         +GQ ++  C     A+TL+++ ++ L+ +
Sbjct: 269 RI--LCCTHDNSENAIHACHSLKEY-----FDGQKVLPFCYIPCAAQTLNDIIDEGLATI 321

Query: 813 EGIVKKIRDSVKFVKTSESHEEKFLELKQQLQVPSERSLFIDDQTQWNTTYQML 866
           + I+ K+R+  + +  S    + F++L    Q  + + L ID  ++W+  YQM+
Sbjct: 322 KPIISKVREFTQELNASTELSDDFIQLTTAYQEGNWK-LPIDASSRWSGNYQMV 374