Miyakogusa Predicted Gene
- Lj4g3v1881460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1881460.1 Non Chatacterized Hit- tr|I1LE43|I1LE43_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,86.64,0,PPR,Pentatricopeptide repeat; coiled-coil,NULL; no
description,Tetratricopeptide-like helical; PPR: ,CUFF.49865.1
(685 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 954 0.0
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 523 e-148
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 505 e-143
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 491 e-138
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 483 e-136
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 475 e-134
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 471 e-133
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 468 e-132
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 461 e-130
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 460 e-129
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 460 e-129
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 459 e-129
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-128
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 456 e-128
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 454 e-128
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 453 e-127
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 450 e-126
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 450 e-126
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 448 e-126
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 447 e-126
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 444 e-124
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 439 e-123
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 433 e-121
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 432 e-121
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 429 e-120
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 426 e-119
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 426 e-119
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 424 e-119
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 424 e-118
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 423 e-118
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 421 e-117
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 420 e-117
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 418 e-117
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 417 e-116
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 415 e-116
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 415 e-116
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 415 e-116
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-116
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 413 e-115
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 410 e-114
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-113
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 406 e-113
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 403 e-112
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 401 e-111
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 397 e-110
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 396 e-110
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 393 e-109
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 391 e-109
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 388 e-108
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 376 e-104
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-102
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 370 e-102
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 2e-98
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 354 9e-98
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 4e-96
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 1e-95
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 1e-95
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 342 8e-94
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 1e-93
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 1e-93
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 5e-93
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 336 4e-92
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 332 4e-91
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 1e-90
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 3e-90
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 6e-90
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 6e-90
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 9e-90
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 1e-89
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 326 3e-89
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 5e-88
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 317 2e-86
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 5e-86
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 4e-85
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 5e-85
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 4e-83
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 4e-83
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 305 6e-83
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 303 3e-82
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 5e-81
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 6e-81
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 2e-79
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 293 2e-79
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 293 3e-79
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 286 3e-77
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 285 6e-77
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 1e-75
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 7e-75
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 5e-74
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 3e-72
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 5e-72
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 1e-71
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 1e-71
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 267 2e-71
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 265 6e-71
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 7e-70
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 9e-70
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 259 6e-69
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 8e-69
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 5e-67
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 252 6e-67
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 1e-65
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 244 1e-64
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 1e-64
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 9e-62
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 232 8e-61
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 3e-59
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 2e-55
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 211 2e-54
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 1e-43
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 4e-43
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 4e-43
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 4e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 100 4e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 95 2e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 7e-16
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 82 2e-15
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 7e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 76 9e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 74 5e-13
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 67 3e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 4e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 66 6e-11
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 66 9e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 65 2e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 65 2e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 65 2e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 64 3e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 63 7e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 62 1e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 60 8e-09
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 8e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 58 3e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 56 1e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 8e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 53 9e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 49 1e-05
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/686 (66%), Positives = 551/686 (80%), Gaps = 3/686 (0%)
Query: 1 MNFHPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNS 60
M+ + L LL++A+S S LGR VHA+I+++ ++P P FL N+LINMYSKLD S
Sbjct: 1 MSLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPES 60
Query: 61 AQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSS 120
A+ VL LT R VV+WTSLI+G NG F AL+ F MRR+ V PNDFTFPC FKA +S
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 120
Query: 121 LQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAY 180
L++P+TGKQ HALA+K G+I DVFVGCSAFDMY KT LR DAR +FDE+P+RNL TWNA+
Sbjct: 121 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAF 180
Query: 181 ISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY 240
ISN+V DGR +A+ AF EF + G PNSITFCAFLNAC+D L L+LG QLH ++RSG+
Sbjct: 181 ISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF 240
Query: 241 REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF 300
DVSV NGLIDFYGKC I SSE++F+ +G +N V+WCS++AA VQNHE+E+A +++
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT--KNAVSWCSLVAAYVQNHEDEKASVLY 298
Query: 301 LQARKE-AEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
L++RK+ E +DFMISSVLSACA + GLELGRS+HA AVKACV+ IFVGSALVD+YGKC
Sbjct: 299 LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 358
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
G IE++EQ F EMP++N+VT N++IGGYAHQG VDMAL LFEEM CG P+Y+T VS
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 418
Query: 420 VLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH 479
+LSACSRAGAVE+GM IF+SM+ Y IEPGAEHY+C+VD+L R+G+V+RAYEFI+ MPI
Sbjct: 419 LLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ 478
Query: 480 PTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVR 539
PTIS+WGAL ACRMHGK +LG +AAE LF+LDP+DSGNHV+LSN A+AGRW EA VR
Sbjct: 479 PTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVR 538
Query: 540 KEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTN 599
+E+K +GIKK GYSWI VKN+VH FQAKD SH N EIQ LAKLR EM+ AGY PD
Sbjct: 539 EELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLK 598
Query: 600 LSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIV 659
LSL+DLE+EEKA+EV +HSEK+ALAFGL++LP VPIRITKNLRICGDCHS KF+S V
Sbjct: 599 LSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSV 658
Query: 660 GREIIVRDNNRFHRFKDGWCSCKDYW 685
REIIVRDNNRFHRFKDG CSCKDYW
Sbjct: 659 KREIIVRDNNRFHRFKDGICSCKDYW 684
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 523 bits (1346), Expect = e-148, Method: Compositional matrix adjust.
Identities = 285/684 (41%), Positives = 410/684 (59%), Gaps = 8/684 (1%)
Query: 8 LLSSLLESAVSTRSPLL-GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS 66
LLSS E +++ L GR VH +I + + N L+NMY+K + A+ V
Sbjct: 314 LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY 373
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
+ V+W S+I G NG F+ A+ + +MRR + P FT + +SL+
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
G+Q H +LK G +V V + +Y++TG + R +F MP+ + +WN+ I +
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 187 DGRSL-DAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
RSL +AV F + N ITF + L+A + LG+Q+H +++ ++ +
Sbjct: 494 SERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT 553
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC-LVFLQAR 304
N LI YGKCG++ E +FSR+ RR+ VTW SM++ + N +A LV+ +
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAE-RRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612
Query: 305 KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
FM ++VLSA A + LE G VHA +V+AC++ ++ VGSALVD+Y KCG ++
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDY 672
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
A + F+ MP RN +WN+MI GYA G + AL LFE M L P +VT V VLSAC
Sbjct: 673 ALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDG-QTPPDHVTFVGVLSAC 731
Query: 425 SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
S AG +E G FESM + Y + P EH++C+ D+L R+G +D+ +FI+ MP+ P + I
Sbjct: 732 SHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLI 791
Query: 485 WGALLGAC-RMHG-KTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEM 542
W +LGAC R +G K +LGK AAE LF+L+PE++ N+V+L NM A+ GRWE+ RK+M
Sbjct: 792 WRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKM 851
Query: 543 KDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSL 602
KD +KK GYSW+ +K+ VH+F A D SH I L +L +M+ AGY P T +L
Sbjct: 852 KDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFAL 911
Query: 603 FDLEDEEKASEVWYHSEKIALAFGLIAL-PHGVPIRITKNLRICGDCHSAIKFISRIVGR 661
+DLE E K + YHSEK+A+AF L A +PIRI KNLR+CGDCHSA K+IS+I GR
Sbjct: 912 YDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGR 971
Query: 662 EIIVRDNNRFHRFKDGWCSCKDYW 685
+II+RD+NRFH F+DG CSC D+W
Sbjct: 972 QIILRDSNRFHHFQDGACSCSDFW 995
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 225/493 (45%), Gaps = 22/493 (4%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL 70
S ++S V R R H+++ + + +LCN+LIN Y + SA+ V L
Sbjct: 8 SFVQSCVGHRGA--ARFFHSRLYK-NRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMP--ITGK 128
R V+W +++G NG AL+ +M ++ + N + F V +A + + G+
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSK-TGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
Q H L K D V MY K G A F ++ +N +WN+ IS Q
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 188 GRSLDAVGAFKEFLCVHGEPNSITFCAFL-NACA-DRLGLHLGRQLHAFIIRSGYREDVS 245
G A F P TF + + AC+ + L Q+ I +SG D+
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK 305
V +GL+ + K G + + VF+++ RN VT ++ LV+ E A +F+
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQM--ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 306 --EAEPTDFMI---SSVLSACAELGGLELGRSVHA-LAVKACVDENIFVGSALVDLYGKC 359
+ P ++I S + AE GL+ GR VH + VD + +G+ LV++Y KC
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
GSI +A +VF M ++ V+WN+MI G G A+ ++ M I P TL+S
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD--ILPGSFTLIS 420
Query: 420 VLSACSRAGAVESGMHIF-ESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPI 478
LS+C+ + G I ES+K I+ ++ L A +G ++ + +MP
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 479 HPTISIWGALLGA 491
H +S W +++GA
Sbjct: 479 HDQVS-WNSIIGA 490
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 270/679 (39%), Positives = 399/679 (58%), Gaps = 14/679 (2%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
+L +AV S LG+ VH ++ L + N LINMY KL A+ V R
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLG-LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSER 379
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT-GKQA 130
+++W S+IAG NG V A+ F+ + R ++P+ +T V KA+SSL ++ KQ
Sbjct: 380 DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQV 439
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
H A+K + D FV + D YS+ +A +F E +L WNA ++ Q S
Sbjct: 440 HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQ---S 495
Query: 191 LDAVGAFKEFLCVHGE---PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVA 247
D K F +H + + T C ++ G+Q+HA+ I+SGY D+ V+
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 248 NGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR-KE 306
+G++D Y KCGD+ +++ F I + V W +M++ ++N EEERA VF Q R
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVP--DDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 307 AEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
P +F I+++ A + L LE GR +HA A+K + FVG++LVD+Y KCGSI++A
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 367 QVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
+F + NI WNAM+ G A G+ L LF++M S GI P VT + VLSACS
Sbjct: 674 CLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK--SLGIKPDKVTFIGVLSACSH 731
Query: 427 AGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWG 486
+G V SM Y I+P EHY+C+ D L R+GLV +A I++M + + S++
Sbjct: 732 SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791
Query: 487 ALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIG 546
LL ACR+ G T+ GK A KL EL+P DS +V+LSNM A+A +W+E + R MK
Sbjct: 792 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 851
Query: 547 IKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLE 606
+KK+ G+SWI VKN++H+F D S+ + I + + ++K+ GY P+T+ +L D+E
Sbjct: 852 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 911
Query: 607 DEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVR 666
+EEK ++YHSEK+A+AFGL++ P PIR+ KNLR+CGDCH+A+K+I+++ REI++R
Sbjct: 912 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLR 971
Query: 667 DNNRFHRFKDGWCSCKDYW 685
D NRFHRFKDG CSC DYW
Sbjct: 972 DANRFHRFKDGICSCGDYW 990
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 208/419 (49%), Gaps = 11/419 (2%)
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
+++G++ A L F +M V+ + TF + + + G+Q H +ALK G +
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLML 350
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
V S +MY K AR +FD M +R+L +WN+ I+ Q+G ++AV F + L
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 204 HGEPNSITFCAFLNACADRL-GLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVS 262
+P+ T + L A + GL L +Q+H I+ D V+ LID Y + +
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 263 SEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPT-DFMISSVLSAC 321
+E++F R ++V W +M+A Q+H+ + +F K+ E + DF +++V C
Sbjct: 471 AEILFE---RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 322 AELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWN 381
L + G+ VHA A+K+ D +++V S ++D+Y KCG + A+ F +P + V W
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 587
Query: 382 AMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIF-ESM 440
MI G G+ + A +F +M L G+ P T+ ++ A S A+E G I ++
Sbjct: 588 TMISGCIENGEEERAFHVFSQMRL--MGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
K +P +VD+ A+ G +D AY + + + I+ W A+L HG+ K
Sbjct: 646 KLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGK 701
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 187/421 (44%), Gaps = 45/421 (10%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
L +A+++ +LG+ HA+I+ E P FL N+LI+MYSK L A+ V R
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENP-ERFLINNLISMYSKCGSLTYARRVFDKMPDR 103
Query: 72 TVVTWTSLIAGCVNNGRFVA-----ALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
+V+W S++A + V A L F +R+D V + T + K
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
+ H A K G D FV + ++Y K G + + +F+EMP R++ WN + ++
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
G +A+ F PN IT +L A I SG D
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITL-----------------RLLARI--SGDDSDA-- 262
Query: 247 ANGLIDFYGKCGDIVS-SEMVFSRIGRSRR-NVVTWCSMLAALVQNHEEERACLVFLQAR 304
G + + D S SE++F G S + + ++L E + C
Sbjct: 263 --GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC------- 313
Query: 305 KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
+ F++ +L+ ++ L LG+ VH +A+K +D + V ++L+++Y K
Sbjct: 314 ---DQVTFIL--MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
A VF M +R++++WN++I G A G A+ LF M L CG+ P T+ SVL A
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF--MQLLRCGLKPDQYTMTSVLKAA 426
Query: 425 S 425
S
Sbjct: 427 S 427
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 204/500 (40%), Gaps = 69/500 (13%)
Query: 19 TRSPLLGRAVHAQIIRSHET----------PLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
T SP+L +H+ + + E+ F+ L+N+Y K + + +
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
R VV W ++ + G A+ + PN+ T L I+G
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL--------RLLARISGD 258
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
+ A GQ+ G A + E+ RN +S + G
Sbjct: 259 DSDA-----GQVKSFANGNDA--------------SSVSEIIFRNKG-----LSEYLHSG 294
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
+ + F + + E + +TF L L LG+Q+H ++ G ++V+N
Sbjct: 295 QYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSN 354
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ-ARKEA 307
LI+ Y K + VF + S R++++W S++A + QN E A +F+Q R
Sbjct: 355 SLINMYCKLRKFGFARTVFDNM--SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412
Query: 308 EPTDFMISSVLSACAELG-GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
+P + ++SVL A + L GL L + VH A+K + FV +AL+D Y + ++ AE
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 367 QVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
+F E ++V WNAM+ GY D L LF M G TL +V C
Sbjct: 473 ILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH--KQGERSDDFTLATVFKTCGF 529
Query: 427 AGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVD--------RAYEF-IQNMP 477
A+ G + Y I+ G + +DL SG++D A +F ++P
Sbjct: 530 LFAINQGKQV-----HAYAIKSGYD-----LDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 478 IHPTISIWGALLGACRMHGK 497
+ P W ++ C +G+
Sbjct: 580 V-PDDVAWTTMISGCIENGE 598
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 10/210 (4%)
Query: 214 AFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS 273
FL L LG+ HA I+ + + N LI Y KCG + + VF ++
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM--P 101
Query: 274 RRNVVTWCSMLAALVQNHE-----EERACLVFLQARKEAEPTDFM-ISSVLSACAELGGL 327
R++V+W S+LAA Q+ E ++A L+F R++ T M +S +L C G +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 328 ELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGY 387
S H A K +D + FV ALV++Y K G ++ + +F EMP R++V WN M+ Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 388 AHQGDVDMALGLFEEMTLGSCGIAPSYVTL 417
G + A+ L S G+ P+ +TL
Sbjct: 222 LEMGFKEEAIDL--SSAFHSSGLNPNEITL 249
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/663 (39%), Positives = 394/663 (59%), Gaps = 7/663 (1%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
+G+ +H +++S + L F L NMY+K +N A+ V R +V+W +++AG
Sbjct: 153 VGKEIHGLLVKSGFS-LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGY 211
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
NG AL +M + ++P+ T V A S+L++ GK+ H A++ G V
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
+ + DMY+K G AR +FD M +RN+ +WN+ I VQ+ +A+ F++ L
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
+P ++ L+ACAD L GR +H + G +VSV N LI Y KC ++ ++
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 264 EMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACA 322
+F ++ R +V+W +M+ QN A F Q R + +P F SV++A A
Sbjct: 392 ASMFGKL--QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Query: 323 ELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNA 382
EL + +H + +++C+D+N+FV +ALVD+Y KCG+I A +F M +R++ TWNA
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNA 509
Query: 383 MIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKE 442
MI GY G AL LFEEM G+ I P+ VT +SV+SACS +G VE+G+ F MKE
Sbjct: 510 MIDGYGTHGFGKAALELFEEMQKGT--IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE 567
Query: 443 IYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGK 502
Y IE +HY +VDLL R+G ++ A++FI MP+ P ++++GA+LGAC++H +
Sbjct: 568 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAE 627
Query: 503 VAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRV 562
AAE+LFEL+P+D G HV+L+N+ +A WE+ VR M G++K G S + +KN V
Sbjct: 628 KAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEV 687
Query: 563 HVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIA 622
H F + ++H + +I A L KL +K+AGY PDTNL L +E++ K + HSEK+A
Sbjct: 688 HSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLA 746
Query: 623 LAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCK 682
++FGL+ G I + KNLR+C DCH+A K+IS + GREI+VRD RFH FK+G CSC
Sbjct: 747 ISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCG 806
Query: 683 DYW 685
DYW
Sbjct: 807 DYW 809
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/678 (38%), Positives = 393/678 (57%), Gaps = 21/678 (3%)
Query: 23 LLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAG 82
++G+ VHA +R E L SF+ N L+ MY KL L S++ +L R +VTW ++++
Sbjct: 219 MMGKQVHAYGLRKGE--LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 83 CVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQI-Y 141
N + + AL + M + V+P++FT V A S L+M TGK+ HA ALK G +
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
+ FVG + DMY + R +FD M R + WNA I+ Q+ +A+ F
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 202 CVHGE-PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDI 260
G NS T + AC +H F+++ G D V N L+D Y + G I
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 261 VSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ------------ARKEAE 308
+ +F ++ R++VTW +M+ V + E A L+ + +R +
Sbjct: 457 DIAMRIFGKM--EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P + ++L +CA L L G+ +HA A+K + ++ VGSALVD+Y KCG ++ + +V
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F ++PQ+N++TWN +I Y G+ A+ L M + G+ P+ VT +SV +ACS +G
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ--GVKPNEVTFISVFAACSHSG 632
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH-PTISIWGA 487
V+ G+ IF MK Y +EP ++HYACVVDLL R+G + AY+ + MP W +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 488 LLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGI 547
LLGA R+H ++G++AA+ L +L+P + ++V+L+N+ +SAG W++AT VR+ MK+ G+
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 548 KKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLED 607
+K G SWI + VH F A DSSH ++ ++ L L E M+K GY PDT+ L ++E+
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 608 EEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRD 667
+EK + HSEK+A+AFG++ G IR+ KNLR+C DCH A KFIS+IV REII+RD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 668 NNRFHRFKDGWCSCKDYW 685
RFHRFK+G CSC DYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 243/516 (47%), Gaps = 29/516 (5%)
Query: 1 MNFHPPNL-LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLN 59
+ P N +LL++ + LG+ +HA + + + N L+N+Y K
Sbjct: 91 LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 150
Query: 60 SAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASS 119
+ V R V+W SLI+ + ++ AL F M + V+P+ FT V A S
Sbjct: 151 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 210
Query: 120 SLQMP---ITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLAT 176
+L MP + GKQ HA L+ G++ + F+ + MY K G ++ + R+L T
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269
Query: 177 WNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFII 236
WN +S+ Q+ + L+A+ +E + EP+ T + L AC+ L G++LHA+ +
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 237 RSGYREDVS-VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEER 295
++G ++ S V + L+D Y C ++S VF G R + W +M+A QN ++
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD--GMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 296 ACLVFLQARKEAE--PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALV 353
A L+F+ + A ++ V+ AC G ++H VK +D + FV + L+
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 354 DLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMT--------- 404
D+Y + G I+ A ++F +M R++VTWN MI GY + AL L +M
Sbjct: 448 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 405 LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV----VDLL 460
+ P+ +TL+++L +C+ A+ G I Y I+ V VD+
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEI-----HAYAIKNNLATDVAVGSALVDMY 562
Query: 461 ARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
A+ G + + + +P I+ W ++ A MHG
Sbjct: 563 AKCGCLQMSRKVFDQIPQKNVIT-WNVIIMAYGMHG 597
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 222/433 (51%), Gaps = 20/433 (4%)
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
++ R+ W L+ V + A+L +V+M ++P+++ FP + KA + LQ
Sbjct: 56 ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115
Query: 127 GKQAHALALKGGQIYD-VFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
GKQ HA K G D V V + ++Y K G +FD + +RN +WN+ IS+
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 186 QDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRL---GLHLGRQLHAFIIRSGYRE 242
+ A+ AF+ L + EP+S T + + AC++ GL +G+Q+HA+ +R G
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN 235
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
+ N L+ YGK G + SS+++ G R++VTW ++L++L QN + A +
Sbjct: 236 SF-IINTLVAMYGKLGKLASSKVLLGSFG--GRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 303 ARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVK-ACVDENIFVGSALVDLYGKCG 360
E EP +F ISSVL AC+ L L G+ +HA A+K +DEN FVGSALVD+Y C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 361 SIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
+ + +VF M R I WNAMI GY+ AL LF M S G+ + T+ V
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME-ESAGLLANSTTMAGV 411
Query: 421 LSACSRAGAV--ESGMHIFESMKEIYRIEPGAEHYA--CVVDLLARSGLVDRAYEFIQNM 476
+ AC R+GA + +H F + + R + + ++D+ +R G +D A M
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDR-----DRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 477 PIHPTISIWGALL 489
++ W ++
Sbjct: 467 EDRDLVT-WNTMI 478
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 207/458 (45%), Gaps = 22/458 (4%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
+SS+L + G+ +HA +++ SF+ + L++MY + S + V
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQPNDFTFPCVFKASSSLQMPITG 127
R + W ++IAG N ALL F+ M + N T V A
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
+ H +K G D FV + DMYS+ G A +F +M R+L TWN I+ V
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 188 GRSLDAVGAFKEFLC-----------VHGEPNSITFCAFLNACADRLGLHLGRQLHAFII 236
DA+ + V +PNSIT L +CA L G+++HA+ I
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL-VQNHEEER 295
++ DV+V + L+D Y KCG + S VF +I ++NV+TW ++ A + + +E
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI--PQKNVITWNVIIMAYGMHGNGQEA 602
Query: 296 ACLVFLQARKEAEPTDFMISSVLSACAELGGLELG-RSVHALAVKACVDENIFVGSALVD 354
L+ + + +P + SV +AC+ G ++ G R + + V+ + + +VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662
Query: 355 LYGKCGSIENAEQVFSEMPQ--RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAP 412
L G+ G I+ A Q+ + MP+ W++++G ++++ + + +A
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722
Query: 413 SYVTLVSVLSACSRAGAVESGMHIFESMKEI-YRIEPG 449
YV L ++ S+ AG + + +MKE R EPG
Sbjct: 723 HYVLLANIYSS---AGLWDKATEVRRNMKEQGVRKEPG 757
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 475 bits (1222), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/685 (36%), Positives = 394/685 (57%), Gaps = 12/685 (1%)
Query: 4 HPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQH 63
H + +SL++SA + ++ L + +HA+++ FL LI+ S + A+
Sbjct: 19 HSDSFYASLIDSA-THKAQL--KQIHARLL-VLGLQFSGFLITKLIHASSSFGDITFARQ 74
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQM 123
V + W ++I G N F ALL + NM+ V P+ FTFP + KA S L
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFD--EMPQRNLATWNAYI 181
G+ HA + G DVFV +Y+K AR +F+ +P+R + +W A +
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 182 SNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYR 241
S Q+G ++A+ F + + +P+ + + LNA L GR +HA +++ G
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 242 EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFL 301
+ + L Y KCG + +++++F ++ N++ W +M++ +N A +F
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSP--NLILWNAMISGYAKNGYAREAIDMFH 312
Query: 302 QA-RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
+ K+ P I+S +SACA++G LE RS++ ++ +++F+ SAL+D++ KCG
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 361 SIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
S+E A VF R++V W+AMI GY G A+ L+ M G G+ P+ VT + +
Sbjct: 373 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG--GVHPNDVTFLGL 430
Query: 421 LSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHP 480
L AC+ +G V G F M + ++I P +HYACV+DLL R+G +D+AYE I+ MP+ P
Sbjct: 431 LMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 481 TISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
+++WGALL AC+ H +LG+ AA++LF +DP ++G++V LSN+ A+A W+ VR
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 541 EMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNL 600
MK+ G+ K+VG SW+ V+ R+ F+ D SH + EI+ + + +K+ G+ + +
Sbjct: 550 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDA 609
Query: 601 SLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVG 660
SL DL DEE + HSE+IA+A+GLI+ P G P+RITKNLR C +CH+A K IS++V
Sbjct: 610 SLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVD 669
Query: 661 REIIVRDNNRFHRFKDGWCSCKDYW 685
REI+VRD NRFH FKDG CSC DYW
Sbjct: 670 REIVVRDTNRFHHFKDGVCSCGDYW 694
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 471 bits (1212), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/646 (38%), Positives = 374/646 (57%), Gaps = 10/646 (1%)
Query: 44 LCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC 103
+ N L+ Y ++ L+ A + + VT+ +LI G +G + ++ F+ MR+
Sbjct: 186 VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDAR 163
QP+DFTF V KA L G+Q HAL++ G D VG D YSK ++ R
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETR 305
Query: 164 NMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRL 223
+FDEMP+ + ++N IS+ Q + ++ F+E C+ + + F L+ A+
Sbjct: 306 MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLS 365
Query: 224 GLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
L +GRQLH + + + V N L+D Y KC +E++F + +R V+W ++
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSL--PQRTTVSWTAL 423
Query: 284 LAALVQNHEEERACLVFLQARK---EAEPTDFMISSVLSACAELGGLELGRSVHALAVKA 340
++ VQ +F + R A+ + F ++VL A A L LG+ +HA +++
Sbjct: 424 ISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF--ATVLKASASFASLLLGKQLHAFIIRS 481
Query: 341 CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLF 400
EN+F GS LVD+Y KCGSI++A QVF EMP RN V+WNA+I +A GD + A+G F
Sbjct: 482 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAF 541
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
+M G+ P V+++ VL+ACS G VE G F++M IY I P +HYAC++DLL
Sbjct: 542 AKMI--ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLL 599
Query: 461 ARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDP-EDSGNH 519
R+G A + + MP P +W ++L ACR+H L + AAEKLF ++ D+ +
Sbjct: 600 GRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAY 659
Query: 520 VVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQ 579
V +SN+ A+AG WE+ V+K M++ GIKK YSW+ V +++HVF + D +H EI
Sbjct: 660 VSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIV 719
Query: 580 AMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRIT 639
+ +L E+++ GY PDT+ + D++++ K + YHSE++A+AF LI+ P G PI +
Sbjct: 720 RKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVM 779
Query: 640 KNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
KNLR C DCH+AIK IS+IV REI VRD +RFH F +G CSC DYW
Sbjct: 780 KNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 232/479 (48%), Gaps = 19/479 (3%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRR--DC 103
N +I+ + K ++SA+ + RTVVTWT L+ N F A F M R C
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGL-RVD- 161
P+ TF + + Q HA A+K G + F+ S + S + R+D
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
A +F+E+P+++ T+N I+ +DG +++ F + +P+ TF L A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV-- 260
Query: 222 RLGLH---LGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV 278
+GLH LG+QLHA + +G+ D SV N ++DFY K ++ + M+F + + V
Sbjct: 261 -VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM--PELDFV 317
Query: 279 TWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALA 337
++ ++++ Q + E + F + + + +F +++LS A L L++GR +H A
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 338 VKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMAL 397
+ A D + VG++LVD+Y KC E AE +F +PQR V+W A+I GY +G L
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGL 437
Query: 398 GLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVV 457
LF +M GS + T +VL A + ++ G + + +E + +V
Sbjct: 438 KLFTKMR-GS-NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLV 494
Query: 458 DLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE--LDPE 514
D+ A+ G + A + + MP +S W AL+ A +G + A K+ E L P+
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 328 ELGRSVHALAVKACVDE----NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAM 383
+L R A + DE N + ++ + K G + +A +F MP R +VTW +
Sbjct: 57 DLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTIL 116
Query: 384 IGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRA 427
+G YA D A LF +M S P +VT ++L C+ A
Sbjct: 117 MGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
+++L+++ S S LLG+ +HA IIRS F + L++MY+K + A V
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEM 513
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
R V+W +LI+ +NG AA+ F M +QP+ + V A S G
Sbjct: 514 PDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGT 573
Query: 129 QA-HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP 170
+ A++ G D+ + G +A + DEMP
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 616
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/726 (34%), Positives = 386/726 (53%), Gaps = 72/726 (9%)
Query: 29 HAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGR 88
HA+I++S ++ LI YS + N A VL T+ +++SLI
Sbjct: 38 HARILKSGAQN-DGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKL 96
Query: 89 FVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCS 148
F ++ F M + P+ P +FK + L GKQ H ++ G D FV S
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 149 AFDMYSKTGLRVDARNMFDEMPQR-----------------------------------N 173
F MY + G DAR +FD M + N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 174 LATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHA 233
+ +WN +S + G +AV F++ + P+ +T + L + D L++GR +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 234 FIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI-------------GRSRR----- 275
++I+ G +D V + +ID YGK G + +F++ G SR
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 276 ---------------NVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLS 319
NVV+W S++A QN ++ A +F + + +P I S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVT 379
AC + L GRS H AV+ + +N+ VGSAL+D+Y KCG I ++ VF+ MP +N+V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 380 WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFES 439
WN+++ G++ G + +FE +L + P +++ S+LSAC + G + G F+
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFE--SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 440 MKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
M E Y I+P EHY+C+V+LL R+G + AY+ I+ MP P +WGALL +CR+
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 500 LGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVK 559
L ++AAEKLF L+PE+ G +V+LSN+ A+ G W E +R +M+ +G+KKN G SWI VK
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 560 NRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSE 619
NRV+ A D SH + +I + ++ +EM+K+G+ P+ + +L D+E++E+ +W HSE
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694
Query: 620 KIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWC 679
K+A+ FGL+ P G P+++ KNLRICGDCH+ IKFIS GREI +RD NRFH FKDG C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754
Query: 680 SCKDYW 685
SC D+W
Sbjct: 755 SCGDFW 760
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 158/373 (42%), Gaps = 81/373 (21%)
Query: 230 QLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQ 289
Q HA I++SG + D ++ LI Y +++V I + ++ S++ AL +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSI--PDPTIYSFSSLIYALTK 93
Query: 290 NHEEERACLVFLQARKEAE-PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFV 348
++ VF + P ++ ++ CAEL ++G+ +H ++ + +D + FV
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 349 GSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSC 408
++ +Y +CG + +A +VF M +++VT +A++ YA +G ++ + + EM S
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME--SS 211
Query: 409 GIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI------------------------- 443
GI + V+ +LS +R+G + + +F+ + +
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 444 -----YRIEPGAEHYACV----VDLLARS------------------------------- 463
Y I+ G CV +D+ +S
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 464 GLVDRA---YEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSG--- 517
GLVD+A +E + + + W +++ C +GK + A +LF + + +G
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK----DIEALELFR-EMQVAGVKP 386
Query: 518 NHVVLSNMLASAG 530
NHV + +ML + G
Sbjct: 387 NHVTIPSMLPACG 399
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 461 bits (1187), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/727 (36%), Positives = 401/727 (55%), Gaps = 69/727 (9%)
Query: 25 GRAVHAQIIRSHETPL-PSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
G A+HA+ + E PL +F N +++ YSK ++S R V+WT++I G
Sbjct: 63 GYALHARKLFD-EMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY 121
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
N G++ A+ +M ++ ++P FT V + ++ + TGK+ H+ +K G +V
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNV 181
Query: 144 FVGCSAFDMYSKTGLRVDARNMFD-------------------------------EMPQR 172
V S +MY+K G + A+ +FD +M +R
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQL 231
++ TWN+ IS Q G L A+ F + L P+ T + L+ACA+ L +G+Q+
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 232 HAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR----------------- 274
H+ I+ +G+ V N LI Y +CG + ++ + + G
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361
Query: 275 --------------RNVVTWCSMLAALVQNHEEERACLVFLQARKEAE-PTDFMISSVLS 319
R+VV W +M+ Q+ A +F + P + ++++LS
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIV 378
+ L L G+ +H AVK+ ++ V +AL+ +Y K G+I +A + F + +R+ V
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 379 TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFE 438
+W +MI A G + AL LFE M + G+ P ++T V V SAC+ AG V G F+
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLME--GLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 439 SMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKT 498
MK++ +I P HYAC+VDL R+GL+ A EFI+ MPI P + WG+LL ACR+H
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNI 599
Query: 499 KLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAV 558
LGKVAAE+L L+PE+SG + L+N+ ++ G+WEEA +RK MKD +KK G+SWI V
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Query: 559 KNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHS 618
K++VHVF +D +H + +EI + K+ +E+KK GY PDT L DLE+E K + +HS
Sbjct: 660 KHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHS 719
Query: 619 EKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGW 678
EK+A+AFGLI+ P +RI KNLR+C DCH+AIKFIS++VGREIIVRD RFH FKDG+
Sbjct: 720 EKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGF 779
Query: 679 CSCKDYW 685
CSC+DYW
Sbjct: 780 CSCRDYW 786
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 214/487 (43%), Gaps = 116/487 (23%)
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
T + H +K G ++ V++ + ++YSKTG + AR +FDEMP R +WN +S
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 186 QDGRSLDA-------------------------VGAFKEFLCVHG-------EPNSITFC 213
+ G +D+ +G + + + V G EP T
Sbjct: 92 KRG-DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 214 AFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSR---- 269
L + A + G+++H+FI++ G R +VSV+N L++ Y KCGD + ++ VF R
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 270 --------------IGR-----------SRRNVVTWCSMLAALVQNHEEERACLVFLQAR 304
+G+ + R++VTW SM++ Q + RA +F +
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 305 KEA--EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSI 362
+++ P F ++SVLSACA L L +G+ +H+ V D + V +AL+ +Y +CG +
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 363 E---------------------------------NAEQVFSEMPQRNIVTWNAMIGGYAH 389
E A+ +F + R++V W AMI GY
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM---KEIYRI 446
G A+ LF M G G P+ TL ++LS S ++ G I S EIY +
Sbjct: 391 HGSYGEAINLFRSMVGG--GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 448
Query: 447 EPGAEHYACVVDLLARSGLV---DRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKV 503
++ + A++G + RA++ I+ T+S W +++ A HG +
Sbjct: 449 SVS----NALITMYAKAGNITSASRAFDLIRCE--RDTVS-WTSMIIALAQHGHAE---- 497
Query: 504 AAEKLFE 510
A +LFE
Sbjct: 498 EALELFE 504
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/679 (36%), Positives = 391/679 (57%), Gaps = 7/679 (1%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
S + +S S RS G +H I++S S + N L+ Y K ++SA+ V
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS-VGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
R V++W S+I G V+NG L FV M ++ + T VF + ++ G+
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
H++ +K + + DMYSK G A+ +F EM R++ ++ + I+ ++G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
+ +AV F+E P+ T A LN CA L G+++H +I + D+ V+N
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQARKE 306
L+D Y KCG + +E+VFS + +++++W +++ +N A +F L K
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEM--RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 307 AEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
P + ++ VL ACA L + GR +H ++ + V ++LVD+Y KCG++ A
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 367 QVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
+F ++ +++V+W MI GY G A+ LF +M GI ++ VS+L ACS
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR--QAGIEADEISFVSLLYACSH 612
Query: 427 AGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWG 486
+G V+ G F M+ +IEP EHYAC+VD+LAR+G + +AY FI+NMPI P +IWG
Sbjct: 613 SGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWG 672
Query: 487 ALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIG 546
ALL CR+H KL + AEK+FEL+PE++G +V+++N+ A A +WE+ +RK + G
Sbjct: 673 ALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 732
Query: 547 IKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLE 606
++KN G SWI +K RV++F A DSS+ + I+A L K+R M + GY P T +L D E
Sbjct: 733 LRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAE 792
Query: 607 DEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVR 666
+ EK + HSEK+A+A G+I+ HG IR+TKNLR+CGDCH KF+S++ REI++R
Sbjct: 793 EMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLR 852
Query: 667 DNNRFHRFKDGWCSCKDYW 685
D+NRFH+FKDG CSC+ +W
Sbjct: 853 DSNRFHQFKDGHCSCRGFW 871
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 153/498 (30%), Positives = 247/498 (49%), Gaps = 13/498 (2%)
Query: 6 PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVL 65
P L S+L+ ++S G+ V IR + + S L + L MY+ L A V
Sbjct: 94 PRTLCSVLQLCADSKSLKDGKEVD-NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 66 SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPI 125
+ + W L+ +G F ++ F M V+ + +TF CV K+ SSL+
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD-ARNMFDEMPQRNLATWNAYISNA 184
G+Q H LK G VG S Y K RVD AR +FDEM +R++ +WN+ I+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQ-RVDSARKVFDEMTERDVISWNSIINGY 271
Query: 185 VQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDV 244
V +G + + F + L E + T + CAD + LGR +H+ +++ + +
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 245 SVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR 304
N L+D Y KCGD+ S++ VF + S R+VV++ SM+A + A +F +
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREM--SDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 305 KEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
+E P + +++VL+ CA L+ G+ VH + + +IFV +AL+D+Y KCGS++
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 364 NAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
AE VFSEM ++I++WN +IGGY+ + AL LF + L +P T+ VL A
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPA 508
Query: 424 CSRAGAVESGMHIFES-MKEIYRIEPGAEHYA-CVVDLLARSGLVDRAYEFIQNMPIHPT 481
C+ A + G I M+ Y + H A +VD+ A+ G + A+ ++
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSD---RHVANSLVDMYAKCGALLLAHMLFDDIASKDL 565
Query: 482 ISIWGALLGACRMHGKTK 499
+S W ++ MHG K
Sbjct: 566 VS-WTVMIAGYGMHGFGK 582
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/690 (36%), Positives = 375/690 (54%), Gaps = 49/690 (7%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD 102
F+ N L+ MYS+ L+ A+ V + VV+W S+I G+ AL F M +
Sbjct: 163 FVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Query: 103 C-VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD 161
+P++ T V +SL GKQ H A+ I ++FVG DMY+K G+ +
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAV--------------------------- 194
A +F M +++ +WNA ++ Q GR DAV
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 195 --------GAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIR-------SG 239
G ++ L +PN +T + L+ CA L G+++H + I+ +G
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNG 402
Query: 240 YREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLV 299
+ ++ V N LID Y KC + ++ +F + R+VVTW M+ Q+ + +A +
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALEL 462
Query: 300 FLQARKE---AEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDE-NIFVGSALVDL 355
+ +E P F IS L ACA L L +G+ +HA A++ + +FV + L+D+
Sbjct: 463 LSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDM 522
Query: 356 YGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYV 415
Y KCGSI +A VF M +N VTW +++ GY G + ALG+F+EM G V
Sbjct: 523 YAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR--RIGFKLDGV 580
Query: 416 TLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQN 475
TL+ VL ACS +G ++ GM F MK ++ + PG EHYAC+VDLL R+G ++ A I+
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEE 640
Query: 476 MPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEA 535
MP+ P +W A L CR+HGK +LG+ AAEK+ EL G++ +LSN+ A+AGRW++
Sbjct: 641 MPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDV 700
Query: 536 TIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYF 595
T +R M+ G+KK G SW+ F D +H EI +L + +K GY
Sbjct: 701 TRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYV 760
Query: 596 PDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFI 655
P+T +L D++DEEK ++ HSEK+ALA+G++ P G IRITKNLR+CGDCH+A ++
Sbjct: 761 PETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYM 820
Query: 656 SRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
SRI+ +II+RD++RFH FK+G CSCK YW
Sbjct: 821 SRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 242/516 (46%), Gaps = 81/516 (15%)
Query: 44 LCNHLINMYSKLDLLNSAQHVLSLTHLRT-------VVTWTSLIA-----GCVNNGRFVA 91
L +HLI+ Y + L+ H +SL LR V W SLI GC N ++
Sbjct: 61 LTSHLISTYISVGCLS---HAVSL--LRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLF 115
Query: 92 ALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFD 151
L+H ++ P+++TFP VFKA + G+ AHAL+L G I +VFVG +
Sbjct: 116 GLMHSLSW-----TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVA 170
Query: 152 MYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAF----KEFLCVHGEP 207
MYS+ DAR +FDEM ++ +WN+ I + + G+ A+ F EF C P
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC---RP 227
Query: 208 NSITFCAFLNACADRLGLH-LGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
++IT L CA LG H LG+QLH F + S +++ V N L+D Y KCG + + V
Sbjct: 228 DNITLVNVLPPCAS-LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA------------------- 307
FS + S ++VV+W +M+A Q E A +F + ++E
Sbjct: 287 FSNM--SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 308 -----------------EPTDFMISSVLSACAELGGLELGRSVHALAVKACV-------- 342
+P + + SVLS CA +G L G+ +H A+K +
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 343 DENIFVGSALVDLYGKCGSIENAEQVFSEM--PQRNIVTWNAMIGGYAHQGDVDMALGLF 400
DEN+ + + L+D+Y KC ++ A +F + +R++VTW MIGGY+ GD + AL L
Sbjct: 405 DENMVI-NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELL 463
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
EM C P+ T+ L AC+ A+ G I + C++D+
Sbjct: 464 SEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMY 523
Query: 461 ARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
A+ G + A NM ++ W +L+ MHG
Sbjct: 524 AKCGSISDARLVFDNMMAKNEVT-WTSLMTGYGMHG 558
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 152/317 (47%), Gaps = 21/317 (6%)
Query: 244 VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQ 302
+++ + LI Y G + + + R S V W S++ + N + +F L
Sbjct: 59 LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM 118
Query: 303 ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSI 362
P ++ V AC E+ + G S HAL++ N+FVG+ALV +Y +C S+
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSL 178
Query: 363 ENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLS 422
+A +VF EM ++V+WN++I YA G +AL +F MT G P +TLV+VL
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT-NEFGCRPDNITLVNVLP 237
Query: 423 ACSRAGAVESG--MHIFESMKE-IYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH 479
C+ G G +H F E I + G C+VD+ A+ G++D A NM +
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVG----NCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 480 PTISIWGALLGACRMHGKTKLGKVA-AEKLFELDPEDSGNHVVLSNMLASAGRWE----- 533
+S W A++ G +++G+ A +LFE E+ V++ A +G +
Sbjct: 294 DVVS-WNAMVA-----GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGY 347
Query: 534 EATIVRKEMKDIGIKKN 550
EA V ++M GIK N
Sbjct: 348 EALGVCRQMLSSGIKPN 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 6 PN--LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQH 63
PN +S L + S + +G+ +HA +R+ + +P F+ N LI+MY+K ++ A+
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQM 123
V + VTWTSL+ G +G AL F MRR + + T V A S M
Sbjct: 535 VFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGM 594
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAF----DMYSKTGLRVDARNMFDEMP-QRNLATWN 178
G + + ++ V G + D+ + G A + +EMP + W
Sbjct: 595 IDQGMEYFN---RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWV 651
Query: 179 AYIS 182
A++S
Sbjct: 652 AFLS 655
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/682 (38%), Positives = 390/682 (57%), Gaps = 19/682 (2%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSH-ETPLPSFLCNHLINMYSKLDLLNSAQHVLSL 67
L L E V R G VH ++++ + +P + N LIN+Y K + A+ +
Sbjct: 201 LGVLAEEGVGGR----GLQVHTVVVKNGLDKTIP--VSNSLINLYLKCGNVRKARILFDK 254
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITG 127
T +++VVTW S+I+G NG + AL F +MR + V+ ++ +F V K ++L+
Sbjct: 255 TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFT 314
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP-QRNLATWNAYISNAVQ 186
+Q H +K G ++D + + YSK +DA +F E+ N+ +W A IS +Q
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQ 374
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
+ +AV F E PN T+ L A L + ++HA ++++ Y +V
Sbjct: 375 NDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTV 430
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE 306
L+D Y K G + + VFS G +++V W +MLA Q E E A +F + K
Sbjct: 431 GTALLDAYVKLGKVEEAAKVFS--GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488
Query: 307 A-EPTDFMISSVLSACAELGG-LELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
+P +F SS+L+ CA + G+ H A+K+ +D ++ V SAL+ +Y K G+IE+
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
AE+VF ++++V+WN+MI GYA G AL +F+EM + VT + V +AC
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK--KRKVKMDGVTFIGVFAAC 606
Query: 425 SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
+ AG VE G F+ M +I P EH +C+VDL +R+G +++A + I+NMP +I
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666
Query: 485 WGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKD 544
W +L ACR+H KT+LG++AAEK+ + PEDS +V+LSNM A +G W+E VRK M +
Sbjct: 667 WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 726
Query: 545 IGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFD 604
+KK GYSWI VKN+ + F A D SH +I L L +K GY PDT+ L D
Sbjct: 727 RNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQD 786
Query: 605 LEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREII 664
++DE K + + HSE++A+AFGLIA P G P+ I KNLR+CGDCH IK I++I REI+
Sbjct: 787 IDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIV 846
Query: 665 VRDNNRFHRF-KDGWCSCKDYW 685
VRD+NRFH F DG CSC D+W
Sbjct: 847 VRDSNRFHHFSSDGVCSCGDFW 868
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 238/492 (48%), Gaps = 10/492 (2%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS 66
++ SS+L+ + + L GR +H Q I+ S + L++ Y K + V
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVS-VGTSLVDTYMKGSNFKDGRKVFD 152
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
R VVTWT+LI+G N L F+ M+ + QPN FTF + +
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
G Q H + +K G + V S ++Y K G AR +FD+ +++ TWN+ IS
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
+G L+A+G F + + +F + + CA+ L QLH +++ G+ D ++
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ-ARK 305
L+ Y KC ++ + +F IG NVV+W +M++ +QN +E A +F + RK
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIG-CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 306 EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENA 365
P +F S +L+A + E VHA VK + + VG+AL+D Y K G +E A
Sbjct: 392 GVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 366 EQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
+VFS + ++IV W+AM+ GYA G+ + A+ +F E+T G GI P+ T S+L+ C+
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG--GIKPNEFTFSSILNVCA 505
Query: 426 RAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIW 485
A F R++ + ++ + A+ G ++ A E + +S W
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS-W 564
Query: 486 GALLGACRMHGK 497
+++ HG+
Sbjct: 565 NSMISGYAQHGQ 576
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 214/456 (46%), Gaps = 20/456 (4%)
Query: 58 LNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA 117
L +A ++ + R ++ SL+ G +GR A F+N+ R ++ + F V K
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 118 SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATW 177
S++L + G+Q H +K G + DV VG S D Y K D R +FDEM +RN+ TW
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 178 NAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIR 237
IS ++ + + + F +PNS TF A L A+ G Q+H +++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 238 SGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC 297
+G + + V+N LI+ Y KCG++ + ++F + ++VVTW SM++ N + A
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKT--EVKSVVTWNSMISGYAANGLDLEAL 280
Query: 298 LVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKA--CVDENIFVGSALVD 354
+F R ++ +SV+ CA L L +H VK D+NI +AL+
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI--RTALMV 338
Query: 355 LYGKCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPS 413
Y KC ++ +A ++F E+ N+V+W AMI G+ + A+ LF EM G+ P+
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK--GVRPN 396
Query: 414 YVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFI 473
T +L+A E + ++ E + ++D + G V+ A +
Sbjct: 397 EFTYSVILTALPVISPSEVHAQVVKT-----NYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 474 QNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLF 509
+ I W A+L G+T+ AA K+F
Sbjct: 452 SGID-DKDIVAWSAMLAGYAQTGETE----AAIKMF 482
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/623 (38%), Positives = 359/623 (57%), Gaps = 14/623 (2%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA 132
V +W S+IA +G ALL F +MR+ + P +FPC KA SSL +GKQ H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 133 LALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLD 192
A G D+FV + MYS G DAR +FDE+P+RN+ +W + I +G +LD
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 193 AVGAFKEFLCVHGEPNSITF------CAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
AV FK+ L + + F + ++AC+ L +H+F+I+ G+ VSV
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 247 ANGLIDFYGKCGD--IVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR 304
N L+D Y K G+ + + +F +I R V++ S+++ Q+ A VF +
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDR--VSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 305 KEAEPT--DFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSI 362
K T +S+VL A + G L +G+ +H ++ +++++ VG++++D+Y KCG +
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 363 ENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLS 422
E A + F M +N+ +W AMI GY G AL LF M G+ P+Y+T VSVL+
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI--DSGVRPNYITFVSVLA 396
Query: 423 ACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTI 482
ACS AG G F +MK + +EPG EHY C+VDLL R+G + +AY+ IQ M + P
Sbjct: 397 ACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 456
Query: 483 SIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEM 542
IW +LL ACR+H +L +++ +LFELD + G +++LS++ A AGRW++ VR M
Sbjct: 457 IIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIM 516
Query: 543 KDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSL 602
K+ G+ K G+S + + VHVF D H + +I LA+L ++ +AGY +T+
Sbjct: 517 KNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVC 576
Query: 603 FDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGRE 662
D+++EEK + HSEK+A+AFG++ G + + KNLR+C DCH+ IK IS+IV RE
Sbjct: 577 HDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDRE 636
Query: 663 IIVRDNNRFHRFKDGWCSCKDYW 685
+VRD RFH FKDG CSC DYW
Sbjct: 637 FVVRDAKRFHHFKDGGCSCGDYW 659
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 194/423 (45%), Gaps = 23/423 (5%)
Query: 25 GRAVHAQ-IIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
G+ H Q + +++ + F+ + LI MYS L A+ V R +V+WTS+I G
Sbjct: 95 GKQTHQQAFVFGYQSDI--FVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTF----PCVFKASSSLQMPITG--KQAHALALKG 137
NG + A+ F ++ D +D F V S+ ++P G + H+ +K
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212
Query: 138 GQIYDVFVGCSAFDMYSKTGLR--VDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVG 195
G V VG + D Y+K G AR +FD++ ++ ++N+ +S Q G S +A
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFE 272
Query: 196 AFKEFLCVHGEP-NSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFY 254
F+ + N+IT L A + L +G+ +H +IR G +DV V +ID Y
Sbjct: 273 VFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMY 332
Query: 255 GKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTDFM 313
KCG + ++ F R+ +NV +W +M+A + +A +F P
Sbjct: 333 CKCGRVETARKAFDRM--KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 314 ISSVLSACAELG-GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM 372
SVL+AC+ G +E R +A+ + V+ + +VDL G+ G ++ A + M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 373 PQR-NIVTWNAMIGGYAHQGDVDMA---LGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
+ + + W++++ +V++A + E+ +CG Y+ L + + R
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGY---YMLLSHIYADAGRWK 507
Query: 429 AVE 431
VE
Sbjct: 508 DVE 510
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/586 (43%), Positives = 355/586 (60%), Gaps = 14/586 (2%)
Query: 109 FTFPC--------VFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRV 160
F PC + +S+ + I G Q H +K G V + + YSK+ L
Sbjct: 8 FFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPF 67
Query: 161 DARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
D+R F++ PQ++ TW++ IS Q+ ++ K+ + + P+ + +CA
Sbjct: 68 DSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCA 127
Query: 221 DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTW 280
+GR +H +++GY DV V + L+D Y KCG+IV + +F + +RNVVTW
Sbjct: 128 ILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEM--PQRNVVTW 185
Query: 281 CSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVK 339
M+ Q E E A +F +A E D+ SSV+S CA LELGR +H L++K
Sbjct: 186 SGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIK 245
Query: 340 ACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGL 399
+ D + FVGS+LV LY KCG E A QVF+E+P +N+ WNAM+ YA + L
Sbjct: 246 SSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIEL 305
Query: 400 FEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDL 459
F+ M L G+ P+++T ++VL+ACS AG V+ G + F+ MKE RIEP +HYA +VD+
Sbjct: 306 FKRMKLS--GMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKE-SRIEPTDKHYASLVDM 362
Query: 460 LARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNH 519
L R+G + A E I NMPI PT S+WGALL +C +H T+L AA+K+FEL P SG H
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422
Query: 520 VVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQ 579
+ LSN A+ GR+E+A RK ++D G KK G SW+ +N+VH F A + HEK+ EI
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIY 482
Query: 580 AMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRIT 639
LA+L EEM+KAGY DT+ L +++ +EK + YHSE++A+AFGLI P PIR+
Sbjct: 483 EKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVM 542
Query: 640 KNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
KNLR+CGDCH+AIKF+S R IIVRDNNRFHRF+DG CSC DYW
Sbjct: 543 KNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 205/435 (47%), Gaps = 26/435 (5%)
Query: 4 HPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQH 63
H N + LL S+ TRS + G +H +++S + +P + N+LIN YSK L ++
Sbjct: 13 HNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIP-LVANNLINFYSKSQLPFDSRR 71
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQM 123
+ ++ TW+S+I+ N +L M ++P+D P K+ + L
Sbjct: 72 AFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSR 131
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISN 183
G+ H L++K G DVFVG S DMY+K G V AR MFDEMPQRN+ TW+ +
Sbjct: 132 CDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYG 191
Query: 184 AVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRED 243
Q G + +A+ FKE L + N +F + ++ CA+ L LGRQ+H I+S +
Sbjct: 192 YAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSS 251
Query: 244 VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQA 303
V + L+ Y KCG + VF+ + +N+ W +ML A Q+ ++ +F +
Sbjct: 252 SFVGSSLVSLYSKCGVPEGAYQVFNEV--PVKNLGIWNAMLKAYAQHSHTQKVIELFKRM 309
Query: 304 RKEAEPTDFM-ISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSI 362
+ +F+ +VL+AC+ G ++ GR ++ ++ ++LVD+ G+ G +
Sbjct: 310 KLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRL 369
Query: 363 ENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
+ A +V + MP W A+ L SC + +
Sbjct: 370 QEALEVITNMPIDPTESVWGAL---------------------LTSCTVHKNTELAAFAA 408
Query: 422 SACSRAGAVESGMHI 436
G V SGMHI
Sbjct: 409 DKVFELGPVSSGMHI 423
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 454 bits (1169), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/661 (36%), Positives = 366/661 (55%), Gaps = 6/661 (0%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVN 85
+ +H +I +H +FL N L+ + + S T + + SLI G VN
Sbjct: 30 KQIHVSLI-NHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN 88
Query: 86 NGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFV 145
N F L F+++R+ + + FTFP V KA + G H+L +K G +DV
Sbjct: 89 NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148
Query: 146 GCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG 205
S +YS +G DA +FDE+P R++ TW A S GR +A+ FK+ + +
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 206 EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEM 265
+P+S L+AC L G + ++ +++ V L++ Y KCG + +
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 266 VFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE-AEPTDFMISSVLSACAEL 324
VF + +++VTW +M+ N + +FLQ +E +P F I LS+CA L
Sbjct: 269 VFDSM--VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASL 326
Query: 325 GGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMI 384
G L+LG +L + N+F+ +AL+D+Y KCG++ +VF EM +++IV NA I
Sbjct: 327 GALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386
Query: 385 GGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIY 444
G A G V ++ +F + GI+P T + +L C AG ++ G+ F ++ +Y
Sbjct: 387 SGLAKNGHVKLSFAVFGQTE--KLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 445 RIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVA 504
++ EHY C+VDL R+G++D AY I +MP+ P +WGALL CR+ T+L +
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 505 AEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHV 564
++L L+P ++GN+V LSN+ + GRW+EA VR M G+KK GYSWI ++ +VH
Sbjct: 505 LKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHE 564
Query: 565 FQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALA 624
F A D SH + +I A L L EM+ G+ P T FD+E+EEK + YHSEK+A+A
Sbjct: 565 FLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVA 624
Query: 625 FGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDY 684
GLI+ HG IR+ KNLR+CGDCH +K IS+I REI+VRDNNRFH F +G CSC DY
Sbjct: 625 LGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDY 684
Query: 685 W 685
W
Sbjct: 685 W 685
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 256/715 (35%), Positives = 386/715 (53%), Gaps = 43/715 (6%)
Query: 8 LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSL 67
L+ +L+++ +S + +HAQ IR+ S + +I++Y+ L LL+ A +
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS--ASIVISIYTNLKLLHEALLLFKT 64
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITG 127
V+ W S+I + F AL FV MR P+ FP V K+ + + G
Sbjct: 65 LKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSK---TGLRVDARNMFDEMPQR------------ 172
+ H ++ G D++ G + +MY+K G ++ N+FDEMPQR
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 173 ---------------------NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSIT 211
++ ++N I+ Q G DA+ +E +P+S T
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 212 FCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIG 271
+ L ++ + + G+++H ++IR G DV + + L+D Y K I SE VFSR+
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL- 303
Query: 272 RSRRNVVTWCSMLAALVQNHEEERACLVFLQ-ARKEAEPTDFMISSVLSACAELGGLELG 330
R+ ++W S++A VQN A +F Q + +P SSV+ ACA L L LG
Sbjct: 304 -YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG 362
Query: 331 RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQ 390
+ +H ++ NIF+ SALVD+Y KCG+I+ A ++F M + V+W A+I G+A
Sbjct: 363 KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH 422
Query: 391 GDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGA 450
G A+ LFEEM G+ P+ V V+VL+ACS G V+ F SM ++Y +
Sbjct: 423 GHGHEAVSLFEEMK--RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 451 EHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE 510
EHYA V DLL R+G ++ AY FI M + PT S+W LL +C +H +L + AEK+F
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 511 LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDS 570
+D E+ G +V++ NM AS GRW+E +R M+ G++K SWI +KN+ H F + D
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 571 SHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIAL 630
SH +I L + E+M+K GY DT+ L D+++E K ++ HSE++A+AFG+I
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINT 660
Query: 631 PHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
G IR+TKN+RIC DCH AIKFIS+I REIIVRDN+RFH F G CSC DYW
Sbjct: 661 EPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/641 (37%), Positives = 374/641 (58%), Gaps = 21/641 (3%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N +++ Y++ ++ A+ V + V+W +L++ V N + A + F + +
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL- 219
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNM 165
++ C+ + + +Q + DV + Y+++G +AR +
Sbjct: 220 ---VSWNCLLGGFVKKKKIVEARQF----FDSMNVRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 166 FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
FDE P +++ TW A +S +Q+ +A +E E N +++ A L +
Sbjct: 273 FDESPVQDVFTWTAMVSGYIQNRMVEEA----RELFDKMPERNEVSWNAMLAGYVQGERM 328
Query: 226 HLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLA 285
+ ++L + +VS N +I Y +CG I ++ +F ++ +R+ V+W +M+A
Sbjct: 329 EMAKELFDVMPC----RNVSTWNTMITGYAQCGKISEAKNLFDKM--PKRDPVSWAAMIA 382
Query: 286 ALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDE 344
Q+ A +F+Q +E + SS LS CA++ LELG+ +H VK +
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 345 NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMT 404
FVG+AL+ +Y KCGSIE A +F EM ++IV+WN MI GY+ G ++AL FE M
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 405 LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSG 464
G+ P T+V+VLSACS G V+ G F +M + Y + P ++HYAC+VDLL R+G
Sbjct: 503 RE--GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
Query: 465 LVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSN 524
L++ A+ ++NMP P +IWG LLGA R+HG T+L + AA+K+F ++PE+SG +V+LSN
Sbjct: 561 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSN 620
Query: 525 MLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAK 584
+ AS+GRW + +R M+D G+KK GYSWI ++N+ H F D H + EI A L +
Sbjct: 621 LYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEE 680
Query: 585 LREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRI 644
L MKKAGY T++ L D+E+EEK V YHSE++A+A+G++ + G PIR+ KNLR+
Sbjct: 681 LDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRV 740
Query: 645 CGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
C DCH+AIK+++RI GR II+RDNNRFH FKDG CSC DYW
Sbjct: 741 CEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 133/526 (25%), Positives = 218/526 (41%), Gaps = 73/526 (13%)
Query: 24 LGRAVHAQIIRSHETPLPSFLC--------NHLINMYSKLDLLNSAQHVLSLTHLRTVVT 75
L RA QI +S PL C N I+ Y + N A V + V+
Sbjct: 40 LKRATQTQIQKSQTKPL--LKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVS 97
Query: 76 WTSLIAGCVNNGRFVAALLHFVNM-RRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALA 134
+ +I+G + NG F A F M RD V S + I G +
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMPERDLV---------------SWNVMIKGYVRNRNL 142
Query: 135 LKGGQIYDVFVG---CSAFDM---YSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
K +++++ CS M Y++ G DAR++FD MP++N +WNA +S VQ+
Sbjct: 143 GKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNS 202
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
+ +A FK +++ L + + RQ S DV N
Sbjct: 203 KMEEACMLFKS----RENWALVSWNCLLGGFVKKKKIVEARQF----FDSMNVRDVVSWN 254
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE 308
+I Y + G I + +F ++V TW +M++ +QN E A +F K E
Sbjct: 255 TIITGYAQSGKIDEARQLFDE--SPVQDVFTWTAMVSGYIQNRMVEEARELF---DKMPE 309
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
+ +++L+ + +E+ + + V C N+ + ++ Y +CG I A+ +
Sbjct: 310 RNEVSWNAMLAGYVQGERMEMAKEL--FDVMPC--RNVSTWNTMITGYAQCGKISEAKNL 365
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F +MP+R+ V+W AMI GY+ G AL LF +M + S + S LS C+
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRS--SFSSALSTCADVV 423
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVD-----LLARSGLVDRAYEFIQNMPIHPTIS 483
A+E G + R+ G C V + + G ++ A + + M +S
Sbjct: 424 ALELGKQLHG------RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 484 IWGALLGACRMHGKTKLGKVAAEKLFE------LDPEDSGNHVVLS 523
W ++ HG G+VA + FE L P+D+ VLS
Sbjct: 478 -WNTMIAGYSRHG---FGEVAL-RFFESMKREGLKPDDATMVAVLS 518
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 187/433 (43%), Gaps = 63/433 (14%)
Query: 149 AFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPN 208
A Y +TG +A +F MP+ + ++N IS +++G A F E E +
Sbjct: 70 AISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM----PERD 125
Query: 209 SITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFS 268
+++ + L R+L + DV N ++ Y + G + + VF
Sbjct: 126 LVSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 269 RIGRSRRNVVTWCSMLAALVQNHEEERACLV------------------FLQARKEAEPT 310
R+ +N V+W ++L+A VQN + E AC++ F++ +K E
Sbjct: 182 RM--PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 311 DFMIS----------SVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
F S ++++ A+ G ++ R + +++F +A+V Y +
Sbjct: 240 QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQL----FDESPVQDVFTWTAMVSGYIQNR 295
Query: 361 SIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
+E A ++F +MP+RN V+WNAM+ GY ++MA LF+ M C ++ T+++
Sbjct: 296 MVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM---PCRNVSTWNTMITG 352
Query: 421 LSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHP 480
+ C G + ++F+ M + +P + +A ++ ++SG A M
Sbjct: 353 YAQC---GKISEAKNLFDKMP---KRDPVS--WAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 481 ---TISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDS---GNHVVLSNMLASAGRWEE 534
S + + L C +LGK +L + E GN ++L M G EE
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL--MYCKCGSIEE 462
Query: 535 ATIVRKEM--KDI 545
A + KEM KDI
Sbjct: 463 ANDLFKEMAGKDI 475
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRS-HETPLPSFLCNHLINMYSKLDLLNSAQHVLSL 67
SS L + + LG+ +H ++++ +ET F+ N L+ MY K + A +
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGC--FVGNALLLMYCKCGSIEEANDLFKE 469
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITG 127
+ +V+W ++IAG +G AL F +M+R+ ++P+D T V A S + G
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 128 KQAHALALKGGQIYDVFVGCSAF----DMYSKTGLRVDARNMFDEMP-QRNLATWNAYI 181
+Q Q Y V + D+ + GL DA N+ MP + + A W +
Sbjct: 530 RQYFYTMT---QDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/682 (36%), Positives = 374/682 (54%), Gaps = 7/682 (1%)
Query: 6 PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVL 65
P++ +S L+ VS + +H+ I++ +F+ LIN YS ++SA+ V
Sbjct: 146 PHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDS-NAFVGAALINAYSVCGSVDSARTVF 204
Query: 66 SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPI 125
+ +V W +++ V NG F +L MR PN++TF KAS L
Sbjct: 205 EGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFD 264
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
K H LK + D VG +Y++ G DA +F+EMP+ ++ W+ I+
Sbjct: 265 FAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 186 QDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
Q+G +AV F PN T + LN CA LG QLH +++ G+ D+
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIY 384
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQA-R 304
V+N LID Y KC + ++ +F+ + S +N V+W +++ E +A +F +A R
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAEL--SSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 305 KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
+ T+ SS L ACA L ++LG VH LA+K + + V ++L+D+Y KCG I+
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
A+ VF+EM ++ +WNA+I GY+ G AL + + M C P+ +T + VLS C
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDC--KPNGLTFLGVLSGC 560
Query: 425 SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
S AG ++ G FESM + IEP EHY C+V LL RSG +D+A + I+ +P P++ I
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620
Query: 485 WGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKD 544
W A+L A + + +AE++ +++P+D +V++SNM A A +W +RK MK+
Sbjct: 621 WRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKE 680
Query: 545 IGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFD 604
+G+KK G SWI + VH F S H I ML L + +AGY PD N L D
Sbjct: 681 MGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLD 740
Query: 605 LEDEEKASEVWYHSEKIALAFGLIALPHGVP-IRITKNLRICGDCHSAIKFISRIVGREI 663
++DEEK +W HSE++ALA+GL+ +P I I KNLRIC DCHSA+K IS IV R++
Sbjct: 741 MDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDL 800
Query: 664 IVRDNNRFHRFKDGWCSCKDYW 685
++RD NRFH F G CSC D+W
Sbjct: 801 VIRDMNRFHHFHAGVCSCGDHW 822
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 217/487 (44%), Gaps = 12/487 (2%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL 70
++L + P+ +A+H I++ L F N L+N Y K A ++
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKGSC-LDLFATNILLNAYVKAGFDKDALNLFDEMPE 112
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQA 130
R V++ +L G + + + R+ + N F K SL
Sbjct: 113 RNNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWL 168
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
H+ +K G + FVG + + YS G AR +F+ + +++ W +S V++G
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGL 250
D++ PN+ TF L A + +H I+++ Y D V GL
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 251 IDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE-AEP 309
+ Y + GD+ + VF+ + + +VV W M+A QN A +F++ R+ P
Sbjct: 289 LQLYTQLGDMSDAFKVFNEM--PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 310 TDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVF 369
+F +SS+L+ CA LG +H L VK D +I+V +AL+D+Y KC ++ A ++F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 370 SEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGA 429
+E+ +N V+WN +I GY + G+ A +F E ++ + VT S L AC+ +
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ--VSVTEVTFSSALGACASLAS 464
Query: 430 VESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALL 489
++ G+ + + + A + ++D+ A+ G + A M S W AL+
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNS-LIDMYAKCGDIKFAQSVFNEMETIDVAS-WNALI 522
Query: 490 GACRMHG 496
HG
Sbjct: 523 SGYSTHG 529
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 14/278 (5%)
Query: 208 NSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVF 267
+S + A L C + + +H I++ G D+ N L++ Y K G + +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 268 SRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGG 326
+ RN V++ + L Q + + ++ + +E E + +S L L
Sbjct: 108 DEM--PERNNVSFVT----LAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 327 LELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGG 386
E+ +H+ VK D N FVG+AL++ Y CGS+++A VF + ++IV W ++
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 387 YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVE--SGMHIFESMKEIY 444
Y G + +L L M + G P+ T + L A GA + G+H + +K Y
Sbjct: 222 YVENGYFEDSLKLLSCMRMA--GFMPNNYTFDTALKASIGLGAFDFAKGVH-GQILKTCY 278
Query: 445 RIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTI 482
++P ++ L + G + A++ MP + +
Sbjct: 279 VLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/574 (40%), Positives = 344/574 (59%), Gaps = 7/574 (1%)
Query: 106 PNDFTF-PCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARN 164
P D F + K + ++ I G+ HA L+ +D+ +G + +MY+K G +AR
Sbjct: 57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARK 116
Query: 165 MFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG 224
+F++MPQR+ TW IS Q R DA+ F + L PN T + + A A
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 225 LHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSML 284
G QLH F ++ G+ +V V + L+D Y + G + +++VF + RN V+W +++
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL--ESRNDVSWNALI 234
Query: 285 AALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVD 343
A + E+A +F ++ P+ F +S+ AC+ G LE G+ VHA +K+
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM 403
F G+ L+D+Y K GSI +A ++F + +R++V+WN+++ YA G A+ FEEM
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
GI P+ ++ +SVL+ACS +G ++ G H +E MK+ I P A HY VVDLL R+
Sbjct: 355 R--RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRA 411
Query: 464 GLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLS 523
G ++RA FI+ MPI PT +IW ALL ACRMH T+LG AAE +FELDP+D G HV+L
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
Query: 524 NMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLA 583
N+ AS GRW +A VRK+MK+ G+KK SW+ ++N +H+F A D H + EI
Sbjct: 472 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 531
Query: 584 KLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLR 643
++ ++K+ GY PDT+ + ++ +E+ + YHSEKIALAF L+ P G I I KN+R
Sbjct: 532 EVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 591
Query: 644 ICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDG 677
+CGDCH+AIK S++VGREIIVRD NRFH FKD
Sbjct: 592 VCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 191/382 (50%), Gaps = 11/382 (2%)
Query: 10 SSLLESAVSTRSPLLGRAVHAQIIRS---HETPLPSFLCNHLINMYSKLDLLNSAQHVLS 66
++LL+ + + GR VHA I++S H+ + N L+NMY+K L A+ V
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDI----VMGNTLLNMYAKCGSLEEARKVFE 119
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
R VTWT+LI+G + R ALL F M R PN+FT V KA+++ +
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
G Q H +K G +V VG + D+Y++ GL DA+ +FD + RN +WNA I+ +
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
+ A+ F+ L P+ ++ + AC+ L G+ +HA++I+SG +
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE 306
N L+D Y K G I + +F R+ ++R+VV+W S+L A Q+ + A F + R+
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRL--AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 307 A-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENA 365
P + SVL+AC+ G L+ G + L K + + +VDL G+ G + A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 366 EQVFSEMP-QRNIVTWNAMIGG 386
+ EMP + W A++
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNA 439
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/665 (36%), Positives = 363/665 (54%), Gaps = 11/665 (1%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
GR +H +++ + +CN L+ MY+ A V + +++W SL+A V
Sbjct: 280 GRGIHGLVVKMGFDSVVC-VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 338
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
N+GR + AL +M N TF A + G+ H L + G Y+
Sbjct: 339 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 398
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
+G + MY K G ++R + +MP+R++ WNA I +D A+ AF+
Sbjct: 399 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 458
Query: 205 GEPNSITFCAFLNAC---ADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
N IT + L+AC D L G+ LHA+I+ +G+ D V N LI Y KCGD+
Sbjct: 459 VSSNYITVVSVLSACLLPGDLL--ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 516
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQN-HEEERACLVFLQARKEAEPTDFMISSVLSA 320
SS+ +F+ G RN++TW +MLAA + H EE LV F S LSA
Sbjct: 517 SSQDLFN--GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 574
Query: 321 CAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
A+L LE G+ +H LAVK + + F+ +A D+Y KCG I ++ R++ +W
Sbjct: 575 AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 634
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
N +I G + F EM GI P +VT VS+L+ACS G V+ G+ ++ +
Sbjct: 635 NILISALGRHGYFEEVCATFHEML--EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMI 692
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
+ +EP EH CV+DLL RSG + A FI MP+ P +W +LL +C++HG
Sbjct: 693 ARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR 752
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKN 560
G+ AAE L +L+PED +V+ SNM A+ GRWE+ VRK+M IKK SW+ +K+
Sbjct: 753 GRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 812
Query: 561 RVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEK 620
+V F D +H + EI A L +++ +K++GY DT+ +L D ++E+K +W HSE+
Sbjct: 813 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSER 872
Query: 621 IALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCS 680
+ALA+ L++ P G +RI KNLRIC DCHS KF+SR++GR I++RD RFH F+ G CS
Sbjct: 873 LALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCS 932
Query: 681 CKDYW 685
CKDYW
Sbjct: 933 CKDYW 937
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 242/499 (48%), Gaps = 23/499 (4%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRSH-ETPLPSFLCNHLINMYSKLDLLNSAQHVL 65
N +S ++ S + LGR + Q+++S E+ L + N LI+M + ++ A ++
Sbjct: 161 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA--VENSLISMLGSMGNVDYANYIF 218
Query: 66 SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPI 125
R ++W S+ A NG + F MRR + N T + +
Sbjct: 219 DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 278
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
G+ H L +K G V V + MY+ G V+A +F +MP ++L +WN+ +++ V
Sbjct: 279 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 338
Query: 186 QDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
DGRSLDA+G + N +TF + L AC GR LH ++ SG +
Sbjct: 339 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 398
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK 305
+ N L+ YGK G++ S V ++ RR+VV W +++ ++ + ++A F R
Sbjct: 399 IGNALVSMYGKIGEMSESRRVLLQM--PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRV 456
Query: 306 EAEPTDFM-ISSVLSACAELGG-LELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
E ++++ + SVLSAC G LE G+ +HA V A + + V ++L+ +Y KCG +
Sbjct: 457 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 516
Query: 364 NAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
+++ +F+ + RNI+TWNAM+ AH G + L L +M S G++ + LSA
Sbjct: 517 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR--SFGVSLDQFSFSEGLSA 574
Query: 424 CSRAGAVESGMHIFESMKEIYRIEPGAEH----YACVVDLLARSGLVDRAYEFIQNMP-- 477
++ +E G + ++ G EH + D+ ++ G + E ++ +P
Sbjct: 575 AAKLAVLEEGQQLHG-----LAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLPPS 626
Query: 478 IHPTISIWGALLGACRMHG 496
++ ++ W L+ A HG
Sbjct: 627 VNRSLPSWNILISALGRHG 645
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 217/461 (47%), Gaps = 18/461 (3%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD 102
++ ++++Y L++ ++ V R VV+WTSL+ G + G + + MR +
Sbjct: 95 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE 154
Query: 103 CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDA 162
V N+ + V + L+ G+Q +K G + V S M G A
Sbjct: 155 GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 214
Query: 163 RNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADR 222
+FD+M +R+ +WN+ + Q+G ++ F H E NS T L+
Sbjct: 215 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 274
Query: 223 LGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
GR +H +++ G+ V V N L+ Y G V + +VF ++ +++++W S
Sbjct: 275 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM--PTKDLISWNS 332
Query: 283 MLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLSACAELGGLELGRSVHALAVKAC 341
++A+ V + A + + +++ +S L+AC E GR +H L V +
Sbjct: 333 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 392
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
+ N +G+ALV +YGK G + + +V +MP+R++V WNA+IGGYA D D AL F+
Sbjct: 393 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 452
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI--YRIEPGAEHYACV--- 456
M + G++ +Y+T+VSVLSAC G + E K + Y + G E V
Sbjct: 453 TMRVE--GVSSNYITVVSVLSACLLPG------DLLERGKPLHAYIVSAGFESDEHVKNS 504
Query: 457 -VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
+ + A+ G + + + + + I W A+L A HG
Sbjct: 505 LITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHG 544
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 204/443 (46%), Gaps = 8/443 (1%)
Query: 51 MYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFT 110
MY+K + A+H+ + +R V+W ++++G V G ++ + F M ++P+ F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 111 FPCVFKA-SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEM 169
+ A S M G Q H K G + DV+V + +Y GL +R +F+EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 170 PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGR 229
P RN+ +W + + G + + +K N + +++C LGR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 230 QLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQ 289
Q+ +++SG ++V N LI G G++ + +F ++ S R+ ++W S+ AA Q
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM--SERDTISWNSIAAAYAQ 238
Query: 290 N-HEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFV 348
N H EE + L R E +S++LS + + GR +H L VK D + V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 349 GSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSC 408
+ L+ +Y G A VF +MP +++++WN+++ + + G ALGL M S
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI--SS 356
Query: 409 GIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDR 468
G + +YVT S L+AC E G I + + + +V + + G +
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 469 AYEFIQNMPIHPTISIWGALLGA 491
+ + MP ++ W AL+G
Sbjct: 416 SRRVLLQMPRRDVVA-WNALIGG 437
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 20/231 (8%)
Query: 275 RNVVTWCSMLAALVQNHEEERACLVFLQARKEAE----PTDFMISSVLSACAELGGL-EL 329
RN V+W +M++ +V+ F RK + P+ F+I+S+++AC G +
Sbjct: 21 RNEVSWNTMMSGIVRVGLYLEGMEFF---RKMCDLGIKPSSFVIASLVTACGRSGSMFRE 77
Query: 330 GRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAH 389
G VH K+ + +++V +A++ LYG G + + +VF EMP RN+V+W +++ GY+
Sbjct: 78 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
+G+ + + +++ M G + ++L V+S+C G I + ++ G
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSL--VISSCGLLKDESLGRQIIGQV-----VKSG 190
Query: 450 AEHYACV----VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
E V + +L G VD A M TIS W ++ A +G
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQNG 240
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/649 (38%), Positives = 376/649 (57%), Gaps = 17/649 (2%)
Query: 48 LINMYSK-LDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQP 106
LI+M+ K + +A V VVTWT +I C+ G A+ F++M +
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 107 NDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSK---TGLRVDAR 163
+ FT VF A + L+ GKQ H+ A++ G + DV CS DMY+K G D R
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCR 325
Query: 164 NMFDEMPQRNLATWNAYISNAVQD-GRSLDAVGAFKEFLCV-HGEPNSITFCAFLNACAD 221
+FD M ++ +W A I+ +++ + +A+ F E + H EPN TF + AC +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWC 281
+G+Q+ + G + SVAN +I + K + ++ F + S +N+V++
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL--SEKNLVSYN 443
Query: 282 SMLAALVQNHEEERACLVFLQ-ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKA 340
+ L +N E+A + + +E + F +S+LS A +G + G +H+ VK
Sbjct: 444 TFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL 503
Query: 341 CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLF 400
+ N V +AL+ +Y KCGSI+ A +VF+ M RN+++W +MI G+A G L F
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
+M G+ P+ VT V++LSACS G V G F SM E ++I+P EHYAC+VDLL
Sbjct: 564 NQMI--EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLL 621
Query: 461 ARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHV 520
R+GL+ A+EFI MP + +W LGACR+H T+LGK+AA K+ ELDP + ++
Sbjct: 622 CRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYI 681
Query: 521 VLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQA 580
LSN+ A AG+WEE+T +R++MK+ + K G SWI V +++H F D++H +I
Sbjct: 682 QLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYD 741
Query: 581 MLAKLREEMKKAGYFPDTNLSLFDLEDEEKASE----VWYHSEKIALAFGLIALPHGVPI 636
L +L E+K+ GY PDT+L L LE+E +E ++ HSEKIA+AFGLI+ P+
Sbjct: 742 ELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPV 801
Query: 637 RITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
R+ KNLR+CGDCH+A+K+IS + GREI++RD NRFH FKDG CSC DYW
Sbjct: 802 RVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 141/501 (28%), Positives = 240/501 (47%), Gaps = 24/501 (4%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
SSLL+S + R LG+ VHA++I P S L N LI++YSK A+ V
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEP-DSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 69 HL---RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPI 125
R VV+W++++A NNGR + A+ FV + PND+ + V +A S+
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 126 TGKQAHALALKGGQI-YDVFVGCSAFDMYSKTGLRVD-ARNMFDEMPQRNLATWNAYISN 183
G+ +K G DV VGCS DM+ K + A +FD+M + N+ TW I+
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 184 AVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRED 243
+Q G +A+ F + + E + T + +ACA+ L LG+QLH++ IRSG +D
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 244 VSVANGLIDFYGKC---GDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQN-HEEERACLV 299
V + L+D Y KC G + VF R+ +V++W +++ ++N + A +
Sbjct: 304 VECS--LVDMYAKCSADGSVDDCRKVFDRM--EDHSVMSWTALITGYMKNCNLATEAINL 359
Query: 300 FLQ--ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYG 357
F + + EP F SS AC L +G+ V A K + N V ++++ ++
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFV 419
Query: 358 KCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTL 417
K +E+A++ F + ++N+V++N + G + + A L E+T G+ S T
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV--SAFTF 477
Query: 418 VSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYAC--VVDLLARSGLVDRAYEFIQN 475
S+LS + G++ G I ++ ++ C ++ + ++ G +D A
Sbjct: 478 ASLLSGVANVGSIRKGEQIH---SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 476 MPIHPTISIWGALLGACRMHG 496
M IS W +++ HG
Sbjct: 535 MENRNVIS-WTSMITGFAKHG 554
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 207/427 (48%), Gaps = 19/427 (4%)
Query: 79 LIAGCVNNGRFVAALLHFVNMRRDCVQPND-FTFPCVFKASSSLQMPITGKQAHALALKG 137
LI +N G A+ M RD ++P D TF + K+ + GK HA ++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 138 GQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP---QRNLATWNAYISNAVQDGRSLDAV 194
D + S +YSK+G A ++F+ M +R++ +W+A ++ +GR LDA+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 195 GAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE-DVSVANGLIDF 253
F EFL + PN + A + AC++ + +GR F++++G+ E DV V LID
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 254 YGKC-GDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD- 311
+ K ++ VF ++ S NVVTW M+ +Q A FL +D
Sbjct: 212 FVKGENSFENAYKVFDKM--SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 312 FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC---GSIENAEQV 368
F +SSV SACAEL L LG+ +H+ A+++ + ++ V +LVD+Y KC GS+++ +V
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKV 327
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDM-ALGLFEEMTLGSCGIAPSYVTLVSVLSACSRA 427
F M ++++W A+I GY ++ A+ LF EM + + P++ T S AC
Sbjct: 328 FDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM-ITQGHVEPNHFTFSSAFKACGNL 386
Query: 428 GAVESGMHIF-ESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWG 486
G + ++ K + + V+ + +S ++ A +++ +S
Sbjct: 387 SDPRVGKQVLGQAFKR--GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 487 ALLGACR 493
L G CR
Sbjct: 445 FLDGTCR 451
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 12/221 (5%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIR---SHETPLPSFLCNHLINMYSKLDLLNSAQHVL 65
+SLL + S G +H+Q+++ S P+ CN LI+MYSK +++A V
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPV----CNALISMYSKCGSIDTASRVF 532
Query: 66 SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPI 125
+ R V++WTS+I G +G + L F M + V+PN+ T+ + A S + +
Sbjct: 533 NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 126 TGKQAHALALKGGQIYDVF--VGCSAFDMYSKTGLRVDARNMFDEMP-QRNLATWNAYIS 182
G + + +I C D+ + GL DA + MP Q ++ W ++
Sbjct: 593 EGWRHFNSMYEDHKIKPKMEHYACMV-DLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Query: 183 NA-VQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADR 222
V L + A K EP + + + ACA +
Sbjct: 652 ACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGK 692
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 250/676 (36%), Positives = 370/676 (54%), Gaps = 12/676 (1%)
Query: 13 LESAVSTRSPLLGRAVHAQ-IIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
+ +A R GR +H Q ++ ++ L L ++++ MY K + A+ V +
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSEL--LLGSNIVKMYFKFWRVEDARKVFDRMPEK 183
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNM-RRDCVQPNDFTFPCVFKASSSLQMPITGKQA 130
+ W ++I+G N +V ++ F ++ C + + T + A + LQ G Q
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI 243
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
H+LA K G +V +YSK G +F E + ++ +NA I +G +
Sbjct: 244 HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGET 303
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGL 250
++ FKE + S T + + L L +H + ++S + SV+ L
Sbjct: 304 ELSLSLFKELMLSGARLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTAL 360
Query: 251 IDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK-EAEP 309
Y K +I S+ +F +++ +W +M++ QN E A +F + +K E P
Sbjct: 361 TTVYSKLNEIESARKLFDE--SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSP 418
Query: 310 TDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVF 369
I+ +LSACA+LG L LG+ VH L + +I+V +AL+ +Y KCGSI A ++F
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478
Query: 370 SEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGA 429
M ++N VTWN MI GY G AL +F EM + GI P+ VT + VL ACS AG
Sbjct: 479 DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML--NSGITPTPVTFLCVLYACSHAGL 536
Query: 430 VESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALL 489
V+ G IF SM Y EP +HYAC+VD+L R+G + RA +FI+ M I P S+W LL
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Query: 490 GACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKK 549
GACR+H T L + +EKLFELDP++ G HV+LSN+ ++ + +A VR+ K + K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 550 NVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEE 609
GY+ I + HVF + D SH + EI L KL +M++AGY P+T L+L D+E+EE
Sbjct: 657 APGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEE 716
Query: 610 KASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNN 669
+ V HSE++A+AFGLIA G IRI KNLR+C DCH+ K IS+I R I+VRD N
Sbjct: 717 RELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDAN 776
Query: 670 RFHRFKDGWCSCKDYW 685
RFH FKDG CSC DYW
Sbjct: 777 RFHHFKDGVCSCGDYW 792
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 217/488 (44%), Gaps = 18/488 (3%)
Query: 28 VHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNG 87
HAQII H L L S L + A+ + V + L+ G N
Sbjct: 39 THAQIIL-HGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 88 RFVAALLHFVNMRRDC-VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVG 146
++L F ++R+ ++PN T+ A+S + G+ H A+ G ++ +G
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 147 CSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL---CV 203
+ MY K DAR +FD MP+++ WN IS ++ ++++ F++ + C
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
++ T L A A+ L LG Q+H+ ++G V G I Y KCG I
Sbjct: 218 --RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 264 EMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAE 323
+F + ++V + +M+ N E E + +F + S+++S
Sbjct: 276 SALFREFRKP--DIVAYNAMIHGYTSNGETELSLSLFKELMLSG--ARLRSSTLVSLVPV 331
Query: 324 LGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAM 383
G L L ++H +K+ + V +AL +Y K IE+A ++F E P++++ +WNAM
Sbjct: 332 SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 384 IGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI 443
I GY G + A+ LF EM +P+ VT+ +LSAC++ GA+ G + + ++
Sbjct: 392 ISGYTQNGLTEDAISLFREMQ--KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 444 YRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKV 503
E ++ + A+ G + A M ++ W ++ +HG+ G+
Sbjct: 450 -DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT-WNTMISGYGLHGQ---GQE 504
Query: 504 AAEKLFEL 511
A +E+
Sbjct: 505 ALNIFYEM 512
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 5/209 (2%)
Query: 230 QLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQ 289
Q HA II G+R D+S+ L G I + +F + R +V + ++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP--DVFLFNVLMRGFSV 95
Query: 290 NHEEERACLVFLQARKEAE--PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIF 347
N + VF RK + P + +SA + GR +H AV D +
Sbjct: 96 NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 348 VGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGS 407
+GS +V +Y K +E+A +VF MP+++ + WN MI GY ++ +F ++ S
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 408 CGIAPSYVTLVSVLSACSRAGAVESGMHI 436
C + TL+ +L A + + GM I
Sbjct: 216 CTRLDT-TTLLDILPAVAELQELRLGMQI 243
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/699 (35%), Positives = 382/699 (54%), Gaps = 46/699 (6%)
Query: 26 RAVHAQIIRS--HETPLPSFLCNHLIN---MYSKLDLLNSAQHVLSLTHLRTVVTWTSLI 80
R +HAQ+I+ H T ++ + LI + + L A V ++ W ++
Sbjct: 50 RIIHAQMIKIGLHNT---NYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMF 106
Query: 81 AGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQI 140
G + V+AL +V M + PN +TFP V K+ + + G+Q H LK G
Sbjct: 107 RGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCD 166
Query: 141 YDVFVGCSAFDMYSKTGLRVD-------------------------------ARNMFDEM 169
D++V S MY + G D A+ +FDE+
Sbjct: 167 LDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI 226
Query: 170 PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGR 229
P +++ +WNA IS + G +A+ FK+ + + P+ T ++ACA + LGR
Sbjct: 227 PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR 286
Query: 230 QLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQ 289
Q+H +I G+ ++ + N LID Y KCG++ ++ +F R+ ++V++W +++
Sbjct: 287 QVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL--PYKDVISWNTLIGGYTH 344
Query: 290 NHEEERACLVFLQARKEAE-PTDFMISSVLSACAELGGLELGRSVHALAVKAC--VDENI 346
+ + A L+F + + E P D + S+L ACA LG +++GR +H K V
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLG 406
+ ++L+D+Y KCG IE A QVF+ + +++ +WNAMI G+A G D + LF M
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR-- 462
Query: 407 SCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLV 466
GI P +T V +LSACS +G ++ G HIF +M + Y++ P EHY C++DLL SGL
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 522
Query: 467 DRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNML 526
A E I M + P IW +LL AC+MHG +LG+ AE L +++PE+ G++V+LSN+
Sbjct: 523 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 582
Query: 527 ASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLR 586
ASAGRW E R + D G+KK G S I + + VH F D H +N EI ML ++
Sbjct: 583 ASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEME 642
Query: 587 EEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICG 646
++KAG+ PDT+ L ++E+E K + +HSEK+A+AFGLI+ G + I KNLR+C
Sbjct: 643 VLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCR 702
Query: 647 DCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
+CH A K IS+I REII RD RFH F+DG CSC DYW
Sbjct: 703 NCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/640 (37%), Positives = 360/640 (56%), Gaps = 7/640 (1%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
L+ MY K A+ V +R V++ ++I G + ++ F+ D +P+
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPD 306
Query: 108 DFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFD 167
T V +A L+ K + LK G + + V D+Y+K G + AR++F+
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 168 EMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHL 227
M ++ +WN+ IS +Q G ++A+ FK + + + + IT+ ++ L
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 228 GRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL 287
G+ LH+ I+SG D+SV+N LID Y KCG++ S +FS +G + VTW ++++A
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG--DTVTWNTVISAC 484
Query: 288 VQNHEEERACLVFLQARK-EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENI 346
V+ + V Q RK E P L CA L LG+ +H ++ + +
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLG 406
+G+AL+++Y KCG +EN+ +VF M +R++VTW MI Y G+ + AL F +M
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME-- 602
Query: 407 SCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLV 466
GI P V ++++ ACS +G V+ G+ FE MK Y+I+P EHYACVVDLL+RS +
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662
Query: 467 DRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNML 526
+A EFIQ MPI P SIW ++L ACR G + + + ++ EL+P+D G ++ SN
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722
Query: 527 ASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLR 586
A+ +W++ +++RK +KD I KN GYSWI V VHVF + D S ++ I L L
Sbjct: 723 AALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 782
Query: 587 EEMKKAGYFPDT-NLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRIC 645
M K GY PD +S E+EEK + HSE++A+AFGL+ G P+++ KNLR+C
Sbjct: 783 SLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVC 842
Query: 646 GDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
GDCH K IS+IVGREI+VRD NRFH FKDG CSCKD W
Sbjct: 843 GDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 236/495 (47%), Gaps = 11/495 (2%)
Query: 10 SSLLESAVSTRSPLLG-RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS-L 67
S + A+S+ S L R +HA +I S F LI+ YS S+ V +
Sbjct: 7 SPFISRALSSSSNLNELRRIHALVI-SLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITG 127
+ + V W S+I NG F AL + +R V P+ +TFP V KA + L G
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
+ L G D+FVG + DMYS+ GL AR +FDEMP R+L +WN+ IS
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 188 GRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVA 247
G +A+ + E P+S T + L A + L + G+ LH F ++SG V V
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 248 NGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA 307
NGL+ Y K + VF + R+ V++ +M+ ++ E + +FL+ +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEM--DVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF 303
Query: 308 EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQ 367
+P +SSVL AC L L L + ++ +KA V + L+D+Y KCG + A
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 368 VFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRA 427
VF+ M ++ V+WN++I GY GD+ A+ LF+ M + ++T + ++S +R
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME--EQADHITYLMLISVSTRL 421
Query: 428 GAVESGMHIFES-MKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWG 486
++ G + + +K I+ + ++D+ A+ G V + + +M T++ W
Sbjct: 422 ADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WN 478
Query: 487 ALLGACRMHGKTKLG 501
++ AC G G
Sbjct: 479 TVISACVRFGDFATG 493
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/691 (37%), Positives = 372/691 (53%), Gaps = 61/691 (8%)
Query: 8 LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCN-----HLINMYSKLDLLNSAQ 62
LL +L++ R+ R VH++II L CN L+ Y+ L + SA+
Sbjct: 44 LLGQVLDTYPDIRTL---RTVHSRII------LEDLRCNSSLGVKLMRAYASLKDVASAR 94
Query: 63 HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQ 122
V R V+ +I VNNG + + F M V+P+ +TFPCV KA S
Sbjct: 95 KVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154
Query: 123 MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYIS 182
+ G++ H A K G +FVG MY K G +AR + DEM +R++ +WN+ +
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
Q+ R DA+ +E V ++ T + L A
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA------------------------ 250
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
V+N + +++ + +F ++G+ +++V+W M+ ++N A V L
Sbjct: 251 ---VSNTTTE------NVMYVKDMFFKMGK--KSLVSWNVMIGVYMKNAMPVEA--VELY 297
Query: 303 ARKEA---EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
+R EA EP I+SVL AC + L LG+ +H + + N+ + +AL+D+Y KC
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 357
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
G +E A VF M R++V+W AMI Y G A+ LF + L G+ P + V+
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK--LQDSGLVPDSIAFVT 415
Query: 420 VLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH 479
L+ACS AG +E G F+ M + Y+I P EH AC+VDLL R+G V AY FIQ+M +
Sbjct: 416 TLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME 475
Query: 480 PTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVR 539
P +WGALLGACR+H T +G +AA+KLF+L PE SG +V+LSN+ A AGRWEE T +R
Sbjct: 476 PNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIR 535
Query: 540 KEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTN 599
MK G+KKN G S + V +H F D SH ++ EI L L ++MK+ GY PD+
Sbjct: 536 NIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSE 595
Query: 600 LSLFDLEDEEKASEVWYHSEKIALAFGLIALPH-----GVPIRITKNLRICGDCHSAIKF 654
+L D+E+E+K + + HSEK+A+ F L+ IRITKNLRICGDCH A K
Sbjct: 596 SALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKL 655
Query: 655 ISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
IS+I REII+RD NRFH F+ G CSC DYW
Sbjct: 656 ISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 304 RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
+K + T F++ VL ++ L R+VH+ + + N +G L+ Y +
Sbjct: 35 QKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVA 91
Query: 364 NAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
+A +VF E+P+RN++ N MI Y + G + +F T+ C + P + T VL A
Sbjct: 92 SARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFG--TMCGCNVRPDHYTFPCVLKA 149
Query: 424 CSRAGAVESGMHIFESMKEI 443
CS +G + G I S ++
Sbjct: 150 CSCSGTIVIGRKIHGSATKV 169
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/687 (35%), Positives = 374/687 (54%), Gaps = 20/687 (2%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNH-----LINMYSKLDLLNSA 61
N L+SL+ + + + G+ +HA + T L F N+ L+N+Y+K + +A
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHA-----YTTKL-GFASNNKIEGALLNLYAKCADIETA 443
Query: 62 QHVLSLTHLRTVVTWTSLIA--GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASS 119
T + VV W ++ G +++ R + F M+ + + PN +T+P + K
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLR--NSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 120 SLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNA 179
L G+Q H+ +K + +V DMY+K G A ++ +++ +W
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTT 561
Query: 180 YISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSG 239
I+ Q A+ F++ L + + ++ACA L G+Q+HA SG
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 240 YREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLV 299
+ D+ N L+ Y +CG I S + F + + + W ++++ Q+ E A V
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAG--DNIAWNALVSGFQQSGNNEEALRV 679
Query: 300 FLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGK 358
F++ +E + +F S + A +E ++ G+ VHA+ K D V +AL+ +Y K
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAK 739
Query: 359 CGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLV 418
CGSI +AE+ F E+ +N V+WNA+I Y+ G AL F++M + P++VTLV
Sbjct: 740 CGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI--HSNVRPNHVTLV 797
Query: 419 SVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPI 478
VLSACS G V+ G+ FESM Y + P EHY CVVD+L R+GL+ RA EFIQ MPI
Sbjct: 798 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 479 HPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIV 538
P +W LL AC +H ++G+ AA L EL+PEDS +V+LSN+ A + +W+ +
Sbjct: 858 KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLT 917
Query: 539 RKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDT 598
R++MK+ G+KK G SWI VKN +H F D +H EI L + + GY D
Sbjct: 918 RQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDC 977
Query: 599 NLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRI 658
L +L+ E+K ++ HSEK+A++FGL++LP VPI + KNLR+C DCH+ IKF+S++
Sbjct: 978 FSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKV 1037
Query: 659 VGREIIVRDNNRFHRFKDGWCSCKDYW 685
REIIVRD RFH F+ G CSCKDYW
Sbjct: 1038 SNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 215/473 (45%), Gaps = 8/473 (1%)
Query: 28 VHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNG 87
+HA+I+ + +CN LI++YS+ ++ A+ V L+ +W ++I+G N
Sbjct: 209 IHARILYQGLRD-STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 88 RFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGC 147
A+ F +M + P + F V A ++ G+Q H L LK G D +V
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 148 SAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEP 207
+ +Y G + A ++F M QR+ T+N I+ Q G A+ FK EP
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 208 NSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVF 267
+S T + + AC+ L G+QLHA+ + G+ + + L++ Y KC DI ++ F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 268 SRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGG 326
+ NVV W ML A + + +F Q + +E P + S+L C LG
Sbjct: 448 --LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 327 LELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGG 386
LELG +H+ +K N +V S L+D+Y K G ++ A + +++V+W MI G
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 387 YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRI 446
Y D AL F +M GI V L + +SAC+ A++ G I + +
Sbjct: 566 YTQYNFDDKALTTFRQML--DRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGF 622
Query: 447 EPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
+V L +R G ++ +Y + I+ W AL+ + G +
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNE 674
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 225/479 (46%), Gaps = 23/479 (4%)
Query: 6 PN--LLSSLLESAVSTRSPL-LGRAVHAQIIRSHETPLPSFLC--NHLINMYSKLDLLNS 60
PN L LLE + T L GR +H+QI++ L S C L + Y L
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK---LGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 61 AQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA--S 118
A V RT+ TW +I + FV M + V PN+ TF V +A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 119 SSLQMPITGKQAHALALKGGQIYDVFVGCSAF-DMYSKTGLRVDARNMFDEMPQRNLATW 177
S+ + +Q HA L G + D V C+ D+YS+ G AR +FD + ++ ++W
Sbjct: 199 GSVAFDVV-EQIHARILYQG-LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 178 NAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIR 237
A IS ++ +A+ F + + P F + L+AC L +G QLH +++
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 238 SGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC 297
G+ D V N L+ Y G+++S+E +FS + S+R+ VT+ +++ L Q E+A
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM--SQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 298 LVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLY 356
+F + + EP ++S++ AC+ G L G+ +HA K N + AL++LY
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 357 GKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVT 416
KC IE A F E N+V WN M+ Y D+ + +F +M + I P+ T
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE--IVPNQYT 492
Query: 417 LVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYAC--VVDLLARSGLVDRAYEFI 473
S+L C R G +E G I +I + Y C ++D+ A+ G +D A++ +
Sbjct: 493 YPSILKTCIRLGDLELGEQIH---SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 269/766 (35%), Positives = 392/766 (51%), Gaps = 111/766 (14%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHV------------------- 64
L RAVH II P L N LI++Y K LN A+ +
Sbjct: 32 LARAVHGNIITFGFQPRAHIL-NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGY 90
Query: 65 -----LSLTH---------LRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFT 110
++L +R V + ++I G +N +A+ F M+ + +P++FT
Sbjct: 91 CASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFT 150
Query: 111 FPCVFKASSSLQMPITGK--QAHALALKGGQIYDVFVGCSAFDMYSKTG----LRVDARN 164
F V A +L + Q HA ALK G Y V + +YSK L AR
Sbjct: 151 FASVL-AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 165 MFDEMPQRNLATW--------------------------------NAYISNAVQDGRSLD 192
+FDE+ +++ +W NA IS V G +
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 193 AVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV--ANGL 250
A+ + + E + T+ + + ACA L LG+Q+HA+++R RED S N L
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR---REDFSFHFDNSL 326
Query: 251 IDFYGKCGDIVSSEMVFSR---------------------IGRSR--------RNVVTWC 281
+ Y KCG + +F + IG ++ +N+++W
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWM 386
Query: 282 SMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKA 340
M++ L +N E +F ++E EP D+ S + +CA LG G+ HA +K
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI 446
Query: 341 CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLF 400
D ++ G+AL+ +Y KCG +E A QVF MP + V+WNA+I G A+ ++
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVY 506
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
EEM GI P +TL++VL+ACS AG V+ G F+SM+ +YRI PGA+HYA ++DLL
Sbjct: 507 EEML--KKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLL 564
Query: 461 ARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHV 520
RSG A I+++P PT IW ALL CR+HG +LG +AA+KLF L PE G ++
Sbjct: 565 CRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYM 624
Query: 521 VLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQA 580
+LSNM A+ G+WEE VRK M+D G+KK V SWI ++ +VH F D+SH + +
Sbjct: 625 LLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYI 684
Query: 581 MLAKLREEMKKAGYFPDTNLSLFDLE-DEEKASEVWYHSEKIALAFGLIALPHGVPIRIT 639
L L +EM++ GY PDT+ L D+E D K + HSEKIA+AFGL+ LP G IRI
Sbjct: 685 YLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIF 744
Query: 640 KNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
KNLR CGDCH+ +F+S +V R+II+RD RFH F++G CSC ++W
Sbjct: 745 KNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 187/428 (43%), Gaps = 46/428 (10%)
Query: 7 NLLSSLLESAVSTRSPL-LGRAVHAQIIRSHETPLPSFLCNHLINMYSKL--DLLNSAQH 63
N L S+ S+ S L R V +I+ E + + ++ N Y L +LL
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQM 123
+ L V + ++I+G VN G + AL M ++ ++FT+P V +A ++ +
Sbjct: 248 NMKL------VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISN 183
GKQ HA L+ + + S +Y K G +AR +F++MP ++L +WNA +S
Sbjct: 302 LQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSG 360
Query: 184 AVQDGRSLDAVGAFKE----------------------------FLCVHG---EPNSITF 212
V G +A FKE F C+ EP F
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 213 CAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR 272
+ +CA G+Q HA +++ G+ +S N LI Y KCG + + VF +
Sbjct: 421 SGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM-- 478
Query: 273 SRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGR 331
+ V+W +++AAL Q+ A V+ + K+ P + +VL+AC+ G ++ GR
Sbjct: 479 PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
Query: 332 S-VHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIV-TWNAMIGGYAH 389
++ + + L+DL + G +AE V +P + W A++ G
Sbjct: 539 KYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRV 598
Query: 390 QGDVDMAL 397
G++++ +
Sbjct: 599 HGNMELGI 606
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/680 (36%), Positives = 359/680 (52%), Gaps = 37/680 (5%)
Query: 39 PLPS-FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFV 97
P P+ F N+L+ YSK L++ + R VTW LI G +G AA+ +
Sbjct: 68 PQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYN 127
Query: 98 NMRRD-CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKT 156
M RD T + K SSS GKQ H +K G + VG MY+
Sbjct: 128 TMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV 187
Query: 157 GLRVDARNMFDEMPQRNLA------------------------------TWNAYISNAVQ 186
G DA+ +F + RN +W A I Q
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQ 247
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
+G + +A+ F+E + + F + L AC ++ G+Q+HA IIR+ +++ + V
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYV 307
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE 306
+ LID Y KC + ++ VF R+ ++NVV+W +M+ Q E A +FL ++
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRM--KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 307 A-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENA 365
+P + + +SACA + LE G H A+ + + + V ++LV LYGKCG I+++
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 366 EQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
++F+EM R+ V+W AM+ YA G + LF++M G+ P VTL V+SACS
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV--QHGLKPDGVTLTGVISACS 483
Query: 426 RAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIW 485
RAG VE G F+ M Y I P HY+C++DL +RSG ++ A FI MP P W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 486 GALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDI 545
LL ACR G ++GK AAE L ELDP + +LS++ AS G+W+ +R+ M++
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603
Query: 546 GIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDL 605
+KK G SWI K ++H F A D S +I A L +L ++ GY PDT+ D+
Sbjct: 604 NVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDV 663
Query: 606 EDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIV 665
E+ K + YHSE++A+AFGLI +P G PIR+ KNLR+C DCH+A K IS + GREI+V
Sbjct: 664 EEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILV 723
Query: 666 RDNNRFHRFKDGWCSCKDYW 685
RD RFHRFKDG CSC D+W
Sbjct: 724 RDAVRFHRFKDGTCSCGDFW 743
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 133/265 (50%), Gaps = 7/265 (2%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
G+ +HA IIR++ ++ + LI+MY K L+ A+ V + VV+WT+++ G
Sbjct: 289 GKQIHACIIRTNFQD-HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 347
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
GR A+ F++M+R + P+ +T A +++ G Q H A+ G I+ V
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
V S +Y K G D+ +F+EM R+ +W A +S Q GR+++ + F + + H
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDK-MVQH 466
Query: 205 G-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG--LIDFYGKCGDIV 261
G +P+ +T ++AC+ R GL Q + ++ S Y S+ + +ID + + G +
Sbjct: 467 GLKPDGVTLTGVISACS-RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL- 524
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAA 286
M F + + W ++L+A
Sbjct: 525 EEAMRFINGMPFPPDAIGWTTLLSA 549
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 105/247 (42%), Gaps = 25/247 (10%)
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P F+ ++++ A A + R V N+F + L+ Y K G I E
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRV----FDRIPQPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F ++P R+ VTWN +I GY+ G V A+ + M + + VTL+++L S G
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSANLTRVTLMTMLKLSSSNG 153
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACV----VDLLARSGLVDRAYEFIQNMPIHPTI-- 482
V G I + I+ G E Y V + + A G + A + + T+
Sbjct: 154 HVSLGKQIHGQV-----IKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMY 208
Query: 483 -SIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKE 541
S+ G LL AC M A +LF +DS + + LA G +EA +E
Sbjct: 209 NSLMGGLL-ACGMIED-------ALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 542 MKDIGIK 548
MK G+K
Sbjct: 261 MKVQGLK 267
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/657 (36%), Positives = 356/657 (54%), Gaps = 11/657 (1%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
GR +H +++ + +CN L+ MY+ A V + +++W SL+A V
Sbjct: 263 GRGIHGLVVKMGFDSVVC-VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 321
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
N+GR + AL +M N TF A + G+ H L + G Y+
Sbjct: 322 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 381
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
+G + MY K G ++R + +MP+R++ WNA I +D A+ AF+
Sbjct: 382 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 441
Query: 205 GEPNSITFCAFLNAC---ADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
N IT + L+AC D L G+ LHA+I+ +G+ D V N LI Y KCGD+
Sbjct: 442 VSSNYITVVSVLSACLLPGDLL--ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 499
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQN-HEEERACLVFLQARKEAEPTDFMISSVLSA 320
SS+ +F+ G RN++TW +MLAA + H EE LV F S LSA
Sbjct: 500 SSQDLFN--GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 557
Query: 321 CAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
A+L LE G+ +H LAVK + + F+ +A D+Y KCG I ++ R++ +W
Sbjct: 558 AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 617
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
N +I G + F EM GI P +VT VS+L+ACS G V+ G+ ++ +
Sbjct: 618 NILISALGRHGYFEEVCATFHEML--EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMI 675
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
+ +EP EH CV+DLL RSG + A FI MP+ P +W +LL +C++HG
Sbjct: 676 ARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR 735
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKN 560
G+ AAE L +L+PED +V+ SNM A+ GRWE+ VRK+M IKK SW+ +K+
Sbjct: 736 GRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 795
Query: 561 RVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEK 620
+V F D +H + EI A L +++ +K++GY DT+ +L D ++E+K +W HSE+
Sbjct: 796 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSER 855
Query: 621 IALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDG 677
+ALA+ L++ P G +RI KNLRIC DCHS KF+SR++GR I++RD RFH F+ G
Sbjct: 856 LALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 242/499 (48%), Gaps = 23/499 (4%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRSH-ETPLPSFLCNHLINMYSKLDLLNSAQHVL 65
N +S ++ S + LGR + Q+++S E+ L + N LI+M + ++ A ++
Sbjct: 144 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA--VENSLISMLGSMGNVDYANYIF 201
Query: 66 SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPI 125
R ++W S+ A NG + F MRR + N T + +
Sbjct: 202 DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 261
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
G+ H L +K G V V + MY+ G V+A +F +MP ++L +WN+ +++ V
Sbjct: 262 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 321
Query: 186 QDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
DGRSLDA+G + N +TF + L AC GR LH ++ SG +
Sbjct: 322 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 381
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK 305
+ N L+ YGK G++ S V ++ RR+VV W +++ ++ + ++A F R
Sbjct: 382 IGNALVSMYGKIGEMSESRRVLLQM--PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRV 439
Query: 306 EAEPTDFM-ISSVLSACAELGG-LELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
E ++++ + SVLSAC G LE G+ +HA V A + + V ++L+ +Y KCG +
Sbjct: 440 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 499
Query: 364 NAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
+++ +F+ + RNI+TWNAM+ AH G + L L +M S G++ + LSA
Sbjct: 500 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR--SFGVSLDQFSFSEGLSA 557
Query: 424 CSRAGAVESGMHIFESMKEIYRIEPGAEH----YACVVDLLARSGLVDRAYEFIQNMP-- 477
++ +E G + ++ G EH + D+ ++ G + E ++ +P
Sbjct: 558 AAKLAVLEEGQQLHG-----LAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLPPS 609
Query: 478 IHPTISIWGALLGACRMHG 496
++ ++ W L+ A HG
Sbjct: 610 VNRSLPSWNILISALGRHG 628
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 217/461 (47%), Gaps = 18/461 (3%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD 102
++ ++++Y L++ ++ V R VV+WTSL+ G + G + + MR +
Sbjct: 78 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE 137
Query: 103 CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDA 162
V N+ + V + L+ G+Q +K G + V S M G A
Sbjct: 138 GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 197
Query: 163 RNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADR 222
+FD+M +R+ +WN+ + Q+G ++ F H E NS T L+
Sbjct: 198 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 257
Query: 223 LGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
GR +H +++ G+ V V N L+ Y G V + +VF ++ +++++W S
Sbjct: 258 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM--PTKDLISWNS 315
Query: 283 MLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLSACAELGGLELGRSVHALAVKAC 341
++A+ V + A + + +++ +S L+AC E GR +H L V +
Sbjct: 316 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 375
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
+ N +G+ALV +YGK G + + +V +MP+R++V WNA+IGGYA D D AL F+
Sbjct: 376 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 435
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI--YRIEPGAEHYACV--- 456
M + G++ +Y+T+VSVLSAC G + E K + Y + G E V
Sbjct: 436 TMRVE--GVSSNYITVVSVLSACLLPG------DLLERGKPLHAYIVSAGFESDEHVKNS 487
Query: 457 -VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
+ + A+ G + + + + + I W A+L A HG
Sbjct: 488 LITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHG 527
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 194/424 (45%), Gaps = 8/424 (1%)
Query: 70 LRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA-SSSLQMPITGK 128
+R V+W ++++G V G ++ + F M ++P+ F + A S M G
Sbjct: 3 VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGV 62
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
Q H K G + DV+V + +Y GL +R +F+EMP RN+ +W + + G
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
+ + +K N + +++C LGRQ+ +++SG ++V N
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQN-HEEERACLVFLQARKEA 307
LI G G++ + +F ++ S R+ ++W S+ AA QN H EE + L R
Sbjct: 183 SLISMLGSMGNVDYANYIFDQM--SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 308 EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQ 367
E +S++LS + + GR +H L VK D + V + L+ +Y G A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 368 VFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRA 427
VF +MP +++++WN+++ + + G ALGL M S G + +YVT S L+AC
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI--SSGKSVNYVTFTSALAACFTP 358
Query: 428 GAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGA 487
E G I + + + +V + + G + + + MP ++ W A
Sbjct: 359 DFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA-WNA 416
Query: 488 LLGA 491
L+G
Sbjct: 417 LIGG 420
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 157/338 (46%), Gaps = 20/338 (5%)
Query: 169 MPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG--LH 226
MP RN +WN +S V+ G L+ + F++ + +P+S + + AC R G
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACG-RSGSMFR 59
Query: 227 LGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAA 286
G Q+H F+ +SG DV V+ ++ YG G + S VF + RNVV+W S++
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM--PDRNVVSWTSLMVG 117
Query: 287 LVQNHEEERACLVFLQARKEAEP-TDFMISSVLSACAELGGLELGRSVHALAVKACVDEN 345
E E ++ R E + +S V+S+C L LGR + VK+ ++
Sbjct: 118 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177
Query: 346 IFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
+ V ++L+ + G G+++ A +F +M +R+ ++WN++ YA G ++ + +F M
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 406 GSCGIAPSYV-TLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLAR-- 462
+ + V TL+SVL G+H ++ G + CV + L R
Sbjct: 238 FHDEVNSTTVSTLLSVLGHVDHQ-KWGRGIHGL-------VVKMGFDSVVCVCNTLLRMY 289
Query: 463 --SGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKT 498
+G A + MP IS W +L+ + G++
Sbjct: 290 AGAGRSVEANLVFKQMPTKDLIS-WNSLMASFVNDGRS 326
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/657 (35%), Positives = 367/657 (55%), Gaps = 33/657 (5%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAAL--------- 93
++ LI++YS+ + +A+ + +R + +W ++I+G +G AL
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM 245
Query: 94 --LHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFD 151
+ V++ C + DF G H+ ++K G ++FV D
Sbjct: 246 DSVTVVSLLSACTEAGDFN---------------RGVTIHSYSIKHGLESELFVSNKLID 290
Query: 152 MYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSIT 211
+Y++ G D + +FD M R+L +WN+ I + + L A+ F+E +P+ +T
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Query: 212 FCAFLNACADRLGLHLGRQLHAFIIRSG-YREDVSVANGLIDFYGKCGDIVSSEMVFSRI 270
+ + + + R + F +R G + ED+++ N ++ Y K G + S+ VF+ +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 271 GRSRRNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPTDFMISSVLSACAELGGLE 328
+ +V++W ++++ QN A ++ ++ E SVL AC++ G L
Sbjct: 411 PNT--DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 329 LGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYA 388
G +H +K + ++FV ++L D+YGKCG +E+A +F ++P+ N V WN +I +
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 389 HQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEP 448
G + A+ LF+EM G+ P ++T V++LSACS +G V+ G FE M+ Y I P
Sbjct: 529 FHGHGEKAVMLFKEML--DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 449 GAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKL 508
+HY C+VD+ R+G ++ A +FI++M + P SIWGALL ACR+HG LGK+A+E L
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 509 FELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAK 568
FE++PE G HV+LSNM ASAG+WE +R G++K G+S + V N+V VF
Sbjct: 647 FEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTG 706
Query: 569 DSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLI 628
+ +H E+ L L+ ++K GY PD L D+ED+EK + HSE++A+AF LI
Sbjct: 707 NQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALI 766
Query: 629 ALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
A P IRI KNLR+CGDCHS KFIS+I REIIVRD+NRFH FK+G CSC DYW
Sbjct: 767 ATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 252/511 (49%), Gaps = 26/511 (5%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
+ +HA+++ S + + L+N+Y L + A+H R V W +I+G
Sbjct: 70 AKCLHARLVVSKQIQ-NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYG 128
Query: 85 NNGRFVAALLHF-VNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
G + F + M + P+ TFP V KA ++ I G + H LALK G ++DV
Sbjct: 129 RAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGFMWDV 185
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
+V S +YS+ +AR +FDEMP R++ +WNA IS Q G + +A+ +
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM 245
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
+S+T + L+AC + + G +H++ I+ G ++ V+N LID Y + G +
Sbjct: 246 ----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDC 301
Query: 264 EMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACA 322
+ VF R+ R++++W S++ A N + RA +F + R +P + S+ S +
Sbjct: 302 QKVFDRM--YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 323 ELGGLELGRSVHALAV-KACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWN 381
+LG + RSV + K E+I +G+A+V +Y K G +++A VF+ +P ++++WN
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 382 AMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMK 441
+I GYA G A+ ++ M IA + T VSVL ACS+AGA+ GM + +
Sbjct: 420 TIISGYAQNGFASEAIEMYNIME-EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL- 477
Query: 442 EIYRIEPGAEHYACVV----DLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGK 497
++ G VV D+ + G ++ A +P ++ W L+ HG
Sbjct: 478 ----LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGH 532
Query: 498 TKLGKVAAEKLFELDPEDSGNHVVLSNMLAS 528
+ + +++ LD +H+ +L++
Sbjct: 533 GEKAVMLFKEM--LDEGVKPDHITFVTLLSA 561
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 189/385 (49%), Gaps = 17/385 (4%)
Query: 114 VFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRN 173
+F+ ++LQ + K HA + QI +V + ++Y G AR+ FD + R+
Sbjct: 60 LFRYCTNLQ---SAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 174 LATWNAYISNAVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLH 232
+ WN IS + G S + + F F+ G P+ TF + L AC + G ++H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIH 173
Query: 233 AFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHE 292
++ G+ DV VA LI Y + + ++ ++F + R++ +W +M++ Q+
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM--PVRDMGSWNAMISGYCQSGN 231
Query: 293 EERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSAL 352
+ A + R T + S+LSAC E G G ++H+ ++K ++ +FV + L
Sbjct: 232 AKEALTLSNGLRAMDSVT---VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 353 VDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAP 412
+DLY + G + + ++VF M R++++WN++I Y A+ LF+EM L I P
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR--IQP 346
Query: 413 SYVTLVSVLSACSRAGAVESGMHIFE-SMKEIYRIEPGAEHYACVVDLLARSGLVDRAYE 471
+TL+S+ S S+ G + + + ++++ + +E A VV + A+ GLVD A
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV-MYAKLGLVDSARA 405
Query: 472 FIQNMPIHPTISIWGALLGACRMHG 496
+P IS W ++ +G
Sbjct: 406 VFNWLPNTDVIS-WNTIISGYAQNG 429
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 327 LELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGG 386
L+ + +HA V + +N+ + + LV+LY G++ A F + R++ WN MI G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 387 YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI------FESM 440
Y G+ + F L S G+ P Y T SVL AC V G I F M
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSS-GLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
++Y A ++ L +R V A MP+ S W A++ G K
Sbjct: 183 WDVYVA-------ASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMISGYCQSGNAKE 234
Query: 501 GKVAAEKLFELD 512
+ L +D
Sbjct: 235 ALTLSNGLRAMD 246
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/516 (40%), Positives = 314/516 (60%), Gaps = 7/516 (1%)
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG--EPNSITFCAFLNACADRLGLHLGRQ 230
N+ WN I + G S+ A ++E + V G EP++ T+ + A + LG
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYRE-MRVSGLVEPDTHTYPFLIKAVTTMADVRLGET 142
Query: 231 LHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQN 290
+H+ +IRSG+ + V N L+ Y CGD+ S+ VF ++ +++V W S++ +N
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM--PEKDLVAWNSVINGFAEN 200
Query: 291 HEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVG 349
+ E A ++ + K +P F I S+LSACA++G L LG+ VH +K + N+
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 350 SALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCG 409
+ L+DLY +CG +E A+ +F EM +N V+W ++I G A G A+ LF+ M + G
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME-STEG 319
Query: 410 IAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRA 469
+ P +T V +L ACS G V+ G F M+E Y+IEP EH+ C+VDLLAR+G V +A
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379
Query: 470 YEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASA 529
YE+I++MP+ P + IW LLGAC +HG + L + A ++ +L+P SG++V+LSNM AS
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 439
Query: 530 GRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEM 589
RW + +RK+M G+KK G+S + V NRVH F D SH ++ I A L ++ +
Sbjct: 440 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRL 499
Query: 590 KKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCH 649
+ GY P + D+E+EEK + V YHSEKIA+AF LI+ P PI + KNLR+C DCH
Sbjct: 500 RSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCH 559
Query: 650 SAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
AIK +S++ REI+VRD +RFH FK+G CSC+DYW
Sbjct: 560 LAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 184/380 (48%), Gaps = 11/380 (2%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLD---LLNSAQHVLS-LTHLRTVVTWTSLIA 81
R +HA IR + + L HLI L ++ A V S + V W +LI
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 82 GCVNNGRFVAALLHFVNMR-RDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQI 140
G G ++A + MR V+P+ T+P + KA +++ G+ H++ ++ G
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 141 YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEF 200
++V S +Y+ G A +FD+MP+++L WN+ I+ ++G+ +A+ + E
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 201 LCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDI 260
+P+ T + L+ACA L LG+++H ++I+ G ++ +N L+D Y +CG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 261 VSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPTDFMISSVL 318
++ +F + +N V+W S++ L N + A +F +++ + P + +L
Sbjct: 274 EEAKTLFDEM--VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 331
Query: 319 SACAELGGLELG-RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRN 376
AC+ G ++ G + + ++ I +VDL + G ++ A + MP Q N
Sbjct: 332 YACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPN 391
Query: 377 IVTWNAMIGGYAHQGDVDMA 396
+V W ++G GD D+A
Sbjct: 392 VVIWRTLLGACTVHGDSDLA 411
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/692 (35%), Positives = 388/692 (56%), Gaps = 22/692 (3%)
Query: 5 PPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLP--SFLCNHLINMYSKLDLLNSAQ 62
P + L+ LL+ ++ +G ++HA +I ++++ ++ N LIN+Y K A+
Sbjct: 30 PIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRAR 89
Query: 63 HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQPNDFTFPCVFKASSSL 121
+ L R VV+W +++ G N+G L F +M +PN+F VFK+ S+
Sbjct: 90 KLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNS 149
Query: 122 QMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYI 181
GKQ H LK G I FV + MYS +A + D++P +L+ +++ +
Sbjct: 150 GRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSAL 209
Query: 182 SNAVQDGRSLDAVGAFKEFLCVHGEP-------NSITFCAFLNACADRLGLHLGRQLHAF 234
S ++ GAFKE L V + N++T+ + L ++ L+L Q+H+
Sbjct: 210 SGYLE-------CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSR 262
Query: 235 IIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEE 294
++R G+ +V LI+ YGKCG ++ ++ VF +N+ +++ A Q+ E
Sbjct: 263 MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFD--DTHAQNIFLNTTIMDAYFQDKSFE 320
Query: 295 RACLVFLQA-RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALV 353
A +F + KE P ++ + +L++ AEL L+ G +H L +K+ ++ VG+ALV
Sbjct: 321 EALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALV 380
Query: 354 DLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPS 413
++Y K GSIE+A + FS M R+IVTWN MI G +H G AL F+ M G P+
Sbjct: 381 NMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIF--TGEIPN 438
Query: 414 YVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFI 473
+T + VL ACS G VE G+H F + + + ++P +HY C+V LL+++G+ A +F+
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFM 498
Query: 474 QNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWE 533
+ PI + W LL AC + +LGK AE E P DSG +V+LSN+ A + WE
Sbjct: 499 RTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWE 558
Query: 534 EATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAG 593
VR M + G+KK G SWI ++N+ HVF A+D+ H + + I A + ++ ++K G
Sbjct: 559 GVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLG 618
Query: 594 YFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIK 653
Y PD + D+++E++ + YHSEK+A+A+GLI P P+ +TKN+RIC DCHSAIK
Sbjct: 619 YSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIK 678
Query: 654 FISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
IS+I R I++RD+NRFH F DG CSC DYW
Sbjct: 679 LISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/728 (33%), Positives = 387/728 (53%), Gaps = 50/728 (6%)
Query: 2 NFHPPNLLS---------SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINM- 51
NF PN + SL+E VS R + H +IR+ P + + L M
Sbjct: 17 NFSNPNQPTTNNERSRHISLIERCVSLRQL---KQTHGHMIRTGTFSDP-YSASKLFAMA 72
Query: 52 -YSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQPNDF 109
S L A+ V W +LI + V ++ F++M + PN +
Sbjct: 73 ALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKY 132
Query: 110 TFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEM 169
TFP + KA++ + G+ H +A+K DVFV S Y G A +F +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 170 PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGR 229
++++ +WN+ I+ VQ G A+ FK+ + + +T L+ACA L GR
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 230 QLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS---------------- 273
Q+ ++I + ++++AN ++D Y KCG I ++ +F +
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 274 -------------RRNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPTDFMISSVL 318
++++V W ++++A QN + A +VF LQ +K + + S L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 319 SACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIV 378
SACA++G LELGR +H+ K + N V SAL+ +Y KCG +E + +VF+ + +R++
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 379 TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFE 438
W+AMIGG A G + A+ +F +M + P+ VT +V ACS G V+ +F
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQ--EANVKPNGVTFTNVFCACSHTGLVDEAESLFH 490
Query: 439 SMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKT 498
M+ Y I P +HYAC+VD+L RSG +++A +FI+ MPI P+ S+WGALLGAC++H
Sbjct: 491 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 550
Query: 499 KLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAV 558
L ++A +L EL+P + G HV+LSN+ A G+WE + +RK M+ G+KK G S I +
Sbjct: 551 NLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610
Query: 559 KNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEE-KASEVWYH 617
+H F + D++H + ++ L ++ E++K GY P+ + L +E+EE K + H
Sbjct: 611 DGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLH 670
Query: 618 SEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDG 677
SEK+A+ +GLI+ IR+ KNLR+CGDCHS K IS++ REIIVRD RFH F++G
Sbjct: 671 SEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNG 730
Query: 678 WCSCKDYW 685
CSC D+W
Sbjct: 731 QCSCNDFW 738
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/561 (37%), Positives = 326/561 (58%), Gaps = 5/561 (0%)
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
G++ HA +K + ++ Y K DAR + DEMP++N+ +W A IS Q
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
G S +A+ F E + G+PN TF L +C GL LG+Q+H I++ Y + V
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE 306
+ L+D Y K G I + +F + R+VV+ +++A Q +E A +F + E
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECL--PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 307 A-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENA 365
P +S+L+A + L L+ G+ H ++ + + ++L+D+Y KCG++ A
Sbjct: 249 GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 308
Query: 366 EQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
++F MP+R ++WNAM+ GY+ G L LF M + P VTL++VLS CS
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR-DEKRVKPDAVTLLAVLSGCS 367
Query: 426 RAGAVESGMHIFESM-KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
++G++IF+ M Y +PG EHY C+VD+L R+G +D A+EFI+ MP PT +
Sbjct: 368 HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV 427
Query: 485 WGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKD 544
G+LLGACR+H +G+ +L E++PE++GN+V+LSN+ ASAGRW + VR M
Sbjct: 428 LGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQ 487
Query: 545 IGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFD 604
+ K G SWI + +H F A D +H + E+ A + ++ +MK+AGY PD + L+D
Sbjct: 488 KAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYD 547
Query: 605 LEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREII 664
+++E+K + HSEK+AL FGLIA G+PIR+ KNLRIC DCH+ K S++ RE+
Sbjct: 548 VDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVS 607
Query: 665 VRDNNRFHRFKDGWCSCKDYW 685
+RD NRFH+ DG CSC DYW
Sbjct: 608 LRDKNRFHQIVDGICSCGDYW 628
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 175/383 (45%), Gaps = 18/383 (4%)
Query: 1 MNFHPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNS 60
M FH + +LL + + R+ G+ VHA +I++ P ++L L+ Y K D L
Sbjct: 50 MGFHGYD---ALLNACLDKRALRDGQRVHAHMIKTRYLP-ATYLRTRLLIFYGKCDCLED 105
Query: 61 AQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSS 120
A+ VL + VV+WT++I+ G AL F M R +PN+FTF V +
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 121 LQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAY 180
GKQ H L +K +FVG S DMY+K G +AR +F+ +P+R++ + A
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 181 ISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY 240
I+ Q G +A+ F PN +T+ + L A + L G+Q H ++R
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL 285
Query: 241 REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF 300
+ N LID Y KCG++ + +F + R ++W +ML ++ +F
Sbjct: 286 PFYAVLQNSLIDMYSKCGNLSYARRLFDNM--PERTAISWNAMLVGYSKHGLGREVLELF 343
Query: 301 --LQARKEAEPTDFMISSVLSACA----ELGGLEL--GRSVHALAVKACVDENIFVGSAL 352
++ K +P + +VLS C+ E GL + G K + +
Sbjct: 344 RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY----GCI 399
Query: 353 VDLYGKCGSIENAEQVFSEMPQR 375
VD+ G+ G I+ A + MP +
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSK 422
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 16/244 (6%)
Query: 316 SVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR 375
++L+AC + L G+ VHA +K ++ + L+ YGKC +E+A +V EMP++
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 376 NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMH 435
N+V+W AMI Y+ G AL +F EM + S G P+ T +VL++C RA + G
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEM-MRSDG-KPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 436 IFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMH 495
I + + + + + ++D+ A++G + A E + +P +S + G +
Sbjct: 175 IHGLIVK-WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG----Y 229
Query: 496 GKTKLGKVAAEKLFELDPED-SGNHVVLSNMLASA--------GRWEEATIVRKEMKDIG 546
+ L + A E L E S N+V +++L + G+ ++R+E+
Sbjct: 230 AQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA 289
Query: 547 IKKN 550
+ +N
Sbjct: 290 VLQN 293
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/611 (39%), Positives = 340/611 (55%), Gaps = 59/611 (9%)
Query: 129 QAHALALKGGQIYDVFVG------CSAFDMYSKTGLRVD-ARNMFDEMPQRNLATWNAYI 181
Q HA+ +K GQ+ D C+ D++ + +D A +F++MPQRN +WN I
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRD---LDYAHKIFNQMPQRNCFSWNTII 97
Query: 182 S--NAVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRS 238
+ + ++L A+ F E + EPN TF + L ACA + G+Q+H ++
Sbjct: 98 RGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKY 157
Query: 239 GYREDVSVANGLIDFYGKCG-----------DIVSSEMV--------------------- 266
G+ D V + L+ Y CG +I+ +MV
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG 217
Query: 267 FSRIGRSR-----------RNVVTWCSMLAALVQNHEEERACLVFLQARK-EAEPTDFMI 314
+ R+G + R+VV+W +M++ N + A VF + +K + P +
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 315 SSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ 374
SVL A + LG LELG +H A + + + +GSAL+D+Y KCG IE A VF +P+
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 375 RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGM 434
N++TW+AMI G+A G A+ F +M G+ PS V +++L+ACS G VE G
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMR--QAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 435 HIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRM 494
F M + +EP EHY C+VDLL RSGL+D A EFI NMPI P IW ALLGACRM
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM 455
Query: 495 HGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
G ++GK A L ++ P DSG +V LSNM AS G W E + +R MK+ I+K+ G S
Sbjct: 456 QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 515
Query: 555 WIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEV 614
I + +H F +D SH K EI +ML ++ ++++ AGY P T L +LE+E+K + +
Sbjct: 516 LIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVL 575
Query: 615 WYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRF 674
YHSEKIA AFGLI+ G PIRI KNLRIC DCHS+IK IS++ R+I VRD RFH F
Sbjct: 576 HYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHF 635
Query: 675 KDGWCSCKDYW 685
+DG CSC DYW
Sbjct: 636 QDGSCSCMDYW 646
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 221/519 (42%), Gaps = 78/519 (15%)
Query: 58 LNSAQHVLSLTHLRTVVTWTSLIAGCVNNGR---FVAALLHFVNMRRDCVQPNDFTFPCV 114
L+ A + + R +W ++I G + +A L + M + V+PN FTFP V
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 115 FKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD------------- 161
KA + GKQ H LALK G D FV + MY G D
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 162 --------------------------------ARNMFDEMPQRNLATWNAYISNAVQDGR 189
AR +FD+M QR++ +WN IS +G
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG-LHLGRQLHAFIIRSGYREDVSVAN 248
DAV F+E PN +T + L A + RLG L LG LH + SG R D + +
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAIS-RLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA- 307
LID Y KCG I + VF R+ R NV+TW +M+ + + A F + R+
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERL--PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 308 EPTDFMISSVLSACAELGGLELGRSVHALAVKA-CVDENIFVGSALVDLYGKCGSIENAE 366
P+D ++L+AC+ G +E GR + V ++ I +VDL G+ G ++ AE
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE 431
Query: 367 QVFSEMP-QRNIVTWNAMIGGYAHQGDVDMA---LGLFEEMTLGSCGIAPSYVTLVSVLS 422
+ MP + + V W A++G QG+V+M + +M G +YV L ++ +
Sbjct: 432 EFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSG---AYVALSNMYA 488
Query: 423 ACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTI 482
+ V S M + K+I R +PG L+ G++ +EF+ HP
Sbjct: 489 SQGNWSEV-SEMRLRMKEKDI-RKDPGCS-------LIDIDGVL---HEFVVEDDSHPKA 536
Query: 483 SIWGALLGACRMHGKTKLG---KVAAEKLFELDPEDSGN 518
++L + K +L + + L L+ ED N
Sbjct: 537 KEINSML--VEISDKLRLAGYRPITTQVLLNLEEEDKEN 573
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 49/341 (14%)
Query: 44 LCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC 103
L N +I+ Y +L +A+ + R+VV+W ++I+G NG F A+ F M++
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDAR 163
++PN T V A S L G+ H A G D +G + DMYSK G+ A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 164 NMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRL 223
++F+ +P+ N+ TW+A I+ G++ DA+ F + P+ + + L AC+
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS--- 386
Query: 224 GLHLGRQLHAFIIRSGYR---EDVSVANGL---IDFYGKCGDIVSSEMVFSRIGRSRRNV 277
H ++ G R + VSV +GL I+ YG D+ +GRS
Sbjct: 387 --------HGGLVEEGRRYFSQMVSV-DGLEPRIEHYGCMVDL---------LGRS---- 424
Query: 278 VTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALA 337
L+ EE +P D + ++L AC G +E+G+ V +
Sbjct: 425 --------GLLDEAEE-------FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANIL 469
Query: 338 VKACV-DENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI 377
+ D +V AL ++Y G+ ++ M +++I
Sbjct: 470 MDMVPHDSGAYV--ALSNMYASQGNWSEVSEMRLRMKEKDI 508
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/564 (39%), Positives = 327/564 (57%), Gaps = 11/564 (1%)
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
+ H L G D F+ MYS G AR +FD+ +R + WNA G
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRL----GLHLGRQLHAFIIRSGYREDV 244
+ +G + + + E + T+ L AC L G+++HA + R GY V
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 245 SVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF---L 301
+ L+D Y + G + + VF G RNVV+W +M+A +N + A F +
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFG--GMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 302 QARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
+ K++ P + SVL ACA L LE G+ +H ++ +D + V SALV +YG+CG
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 362 IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
+E ++VF M R++V+WN++I Y G A+ +FEEM + G +P+ VT VSVL
Sbjct: 336 LEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML--ANGASPTPVTFVSVL 393
Query: 422 SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPT 481
ACS G VE G +FE+M + I+P EHYAC+VDLL R+ +D A + +Q+M P
Sbjct: 394 GACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPG 453
Query: 482 ISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKE 541
+WG+LLG+CR+HG +L + A+ +LF L+P+++GN+V+L+++ A A W+E V+K
Sbjct: 454 PKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKL 513
Query: 542 MKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLS 601
++ G++K G W+ V+ +++ F + D + +I A L KL E+MK+ GY P T
Sbjct: 514 LEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGV 573
Query: 602 LFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGR 661
L++LE EEK V HSEK+ALAFGLI G PIRITKNLR+C DCH KFIS+ + +
Sbjct: 574 LYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEK 633
Query: 662 EIIVRDNNRFHRFKDGWCSCKDYW 685
EI+VRD NRFHRFK+G CSC DYW
Sbjct: 634 EILVRDVNRFHRFKNGVCSCGDYW 657
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 184/378 (48%), Gaps = 12/378 (3%)
Query: 28 VHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNG 87
VH I+ + P FL LI MYS L ++ A+ V T RT+ W +L G
Sbjct: 99 VHRHILDNGSDQDP-FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 88 RFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT----GKQAHALALKGGQIYDV 143
L + M R V+ + FT+ V KA + + + GK+ HA + G V
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL-- 201
++ + DMY++ G A +F MP RN+ +W+A I+ ++G++ +A+ F+E +
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
PNS+T + L ACA L G+ +H +I+R G + V + L+ YG+CG +
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE-AEPTDFMISSVLSA 320
+ VF R+ R+VV+W S++++ + ++A +F + A PT SVL A
Sbjct: 338 VGQRVFDRM--HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 321 CAELGGLELGRSV-HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM-PQRNIV 378
C+ G +E G+ + + + I + +VDL G+ ++ A ++ +M +
Sbjct: 396 CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 379 TWNAMIGGYAHQGDVDMA 396
W +++G G+V++A
Sbjct: 456 VWGSLLGSCRIHGNVELA 473
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 15/243 (6%)
Query: 305 KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
+E+ P+ ++ C L VH + D++ F+ + L+ +Y GS++
Sbjct: 71 QESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDY 130
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
A +VF + +R I WNA+ G + LGL+ +M G+ T VL AC
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMN--RIGVESDRFTYTYVLKAC 188
Query: 425 SRAGAVESGMHIFESMKEIY----RIEPGAEHY--ACVVDLLARSGLVDRAYEFIQNMPI 478
A E ++ KEI+ R + Y +VD+ AR G VD A MP+
Sbjct: 189 V---ASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 479 HPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNML---ASAGRWEEA 535
+S W A++ +GK ++ + S N V + ++L AS E+
Sbjct: 246 RNVVS-WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG 304
Query: 536 TIV 538
++
Sbjct: 305 KLI 307
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 262/717 (36%), Positives = 383/717 (53%), Gaps = 52/717 (7%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
LL +V+ R G+++HA ++S ++L NH +N+YSK L+ A+ T
Sbjct: 14 LLLKSVAERDLFTGKSLHALYVKS-IVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEP 72
Query: 72 TV-------------------------------VTWTSLIAGCVNNGRFVAALLHFVNMR 100
V V++ +LI+G + AA++ F MR
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 101 RDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF--VGCSAFDMYSKTGL 158
+ + + FT + A I KQ H ++ GG +D + V + YSK GL
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGG--FDSYSSVNNAFVTYYSKGGL 188
Query: 159 RVDARNMFDEMPQ-RNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLN 217
+A ++F M + R+ +WN+ I Q A+ +KE + + + T + LN
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 218 ACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCG---DIVSSEMVFSRIGRSR 274
A L GRQ H +I++G+ ++ V +GLIDFY KCG + SE VF I
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP- 307
Query: 275 RNVVTWCSMLAALVQNHE-EERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRS 332
++V W +M++ N E E A F Q ++ P D V SAC+ L +
Sbjct: 308 -DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 333 VHALAVKACVDEN-IFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQG 391
+H LA+K+ + N I V +AL+ LY K G++++A VF MP+ N V++N MI GYA G
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 392 DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAE 451
AL L++ M GIAP+ +T V+VLSAC+ G V+ G F +MKE ++IEP AE
Sbjct: 427 HGTEALLLYQRML--DSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAE 484
Query: 452 HYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFEL 511
HY+C++DLL R+G ++ A FI MP P W ALLGACR H L + AA +L +
Sbjct: 485 HYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVM 544
Query: 512 DPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSS 571
P + +V+L+NM A A +WEE VRK M+ I+K G SWI VK + HVF A+D S
Sbjct: 545 QPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWS 604
Query: 572 HEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKAS---EVWYHSEKIALAFGLI 628
H E+ L ++ ++MKK GY D ++ ++ + + +HSEK+A+AFGL+
Sbjct: 605 HPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLM 664
Query: 629 ALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
+ G + + KNLRICGDCH+AIKF+S + GREIIVRDN RFH FKDG CSC DYW
Sbjct: 665 STRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/614 (36%), Positives = 341/614 (55%), Gaps = 37/614 (6%)
Query: 105 QPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARN 164
+P T+ + + S + GK+ H G + + + MY+K G VDAR
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 165 MFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL----------------------- 201
+FDEMP R+L +WN ++ + G +A F E
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 202 ---------CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLID 252
+ PN T + A A + G+++H I+R+G D + + L+D
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 253 FYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE-PTD 311
YGKCG I + +F +I ++VV+W SM+ ++ +F + E P +
Sbjct: 262 MYGKCGCIDEARNIFDKI--VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNE 319
Query: 312 FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSE 371
+ + VL+ACA+L ELG+ VH + D F S+LVD+Y KCG+IE+A+ V
Sbjct: 320 YTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDG 379
Query: 372 MPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVE 431
P+ ++V+W ++IGG A G D AL F+ L G P +VT V+VLSAC+ AG VE
Sbjct: 380 CPKPDLVSWTSLIGGCAQNGQPDEALKYFD--LLLKSGTKPDHVTFVNVLSACTHAGLVE 437
Query: 432 SGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGA 491
G+ F S+ E +R+ ++HY C+VDLLARSG ++ I MP+ P+ +W ++LG
Sbjct: 438 KGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGG 497
Query: 492 CRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNV 551
C +G L + AA++LF+++PE+ +V ++N+ A+AG+WEE +RK M++IG+ K
Sbjct: 498 CSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRP 557
Query: 552 GYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKA 611
G SW +K + HVF A D+SH ++I L +LR++MK+ GY P T+L L D+EDE+K
Sbjct: 558 GSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKE 617
Query: 612 SEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRF 671
+ YHSEK+A+AF +++ G I++ KNLR C DCH AIKFIS I R+I VRD+ RF
Sbjct: 618 ENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRF 677
Query: 672 HRFKDGWCSCKDYW 685
H F++G CSC DYW
Sbjct: 678 HCFENGQCSCGDYW 691
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 200/402 (49%), Gaps = 9/402 (2%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRR-DCV 104
N ++N Y+++ LL A+ + + +WT+++ G V + AL+ + M+R
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 105 QPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARN 164
+PN FT A+++++ GK+ H ++ G D + S DMY K G +ARN
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 165 MFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG 224
+FD++ ++++ +W + I + R + F E + PN TF LNACAD
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 225 LHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSML 284
LG+Q+H ++ R G+ ++ L+D Y KCG+I S++ V G + ++V+W S++
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVD--GCPKPDLVSWTSLI 392
Query: 285 AALVQNHEEERACLVF-LQARKEAEPTDFMISSVLSACAELGGLELGRS-VHALAVKACV 342
QN + + A F L + +P +VLSAC G +E G +++ K +
Sbjct: 393 GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRL 452
Query: 343 DENIFVGSALVDLYGKCGSIENAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMALGLFE 401
+ LVDL + G E + V SEMP + + W +++GG + G++D+A +
Sbjct: 453 SHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQ 512
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI 443
E+ +YVT+ ++ +A AG E + + M+EI
Sbjct: 513 ELFKIEPENPVTYVTMANIYAA---AGKWEEEGKMRKRMQEI 551
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 145/355 (40%), Gaps = 46/355 (12%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
G+ +H I+R+ L + L++MY K ++ A+++ + VV+WTS+I
Sbjct: 237 GKEIHGHIVRAG-LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
+ R+ F + C +PN++TF V A + L GKQ H + G F
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
S DMY+K G A+++ D P+ +L +W + I Q+G+ +A+ F L
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 205 GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG-----LIDFYGKCGD 259
+P+ +TF L+AC HA ++ G S+ D Y D
Sbjct: 416 TKPDHVTFVNVLSACT-----------HAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 260 IVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLS 319
+++ F ++ ++V++ M +P+ F+ +SVL
Sbjct: 465 LLARSGRFEQL----KSVISEMPM------------------------KPSKFLWASVLG 496
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ 374
C+ G ++L A + EN + ++Y G E ++ M +
Sbjct: 497 GCSTYGNIDLAEEA-AQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/645 (36%), Positives = 367/645 (56%), Gaps = 28/645 (4%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N L++ Y K ++ A++V L R VV+WT+++ G + G A F M +
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----PE 138
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQ-IYDVFVGCSAFDMYSKTGLRVDARN 164
N+ ++ +F + G+ A L + DV + + G +AR
Sbjct: 139 RNEVSWTVMFGG-----LIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARL 193
Query: 165 MFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG 224
+FDEM +RN+ TW I+ Q+ R V ++ V E +++ + L LG
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNR----VDVARKLFEVMPEKTEVSWTSML------LG 243
Query: 225 LHLGRQLH--AFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
L ++ + V N +I +G+ G+I + VF + R+ TW
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLM--EDRDNATWRG 301
Query: 283 MLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
M+ A + E A +F Q +K+ P+ + S+LS CA L L+ GR VHA V+
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
D++++V S L+ +Y KCG + A+ VF ++I+ WN++I GYA G + AL +F
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLA 461
EM S G P+ VTL+++L+ACS AG +E G+ IFESM+ + + P EHY+C VD+L
Sbjct: 422 EMP--SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLG 479
Query: 462 RSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVV 521
R+G VD+A E I++M I P ++WGALLGAC+ H + L +VAA+KLFE +P+++G +V+
Sbjct: 480 RAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVL 539
Query: 522 LSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVF-QAKDSSHEKNSEIQA 580
LS++ AS +W + +VRK M+ + K G SWI V +VH+F + +H + + I
Sbjct: 540 LSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILM 599
Query: 581 MLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITK 640
ML K +++AGY PD + L D+++EEK + HSE++A+A+GL+ LP GVPIR+ K
Sbjct: 600 MLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMK 659
Query: 641 NLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
NLR+CGDCH+AIK IS++ REII+RD NRFH F +G CSC+DYW
Sbjct: 660 NLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 181/426 (42%), Gaps = 59/426 (13%)
Query: 153 YSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDA------------------- 193
Y GL +AR +FDEM +RN+ +WN +S +++ ++A
Sbjct: 58 YFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMV 117
Query: 194 --------VGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
VG + E N +++ D + R+L+ + +DV
Sbjct: 118 KGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP----VKDVV 173
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQA 303
+ +I + G + + ++F + RNVVTW +M+ QN+ + A +F +
Sbjct: 174 ASTNMIGGLCREGRVDEARLIFDEM--RERNVVTWTTMITGYRQNNRVDVARKLFEVMPE 231
Query: 304 RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
+ E T ++ LS E E + V AC +A++ +G+ G I
Sbjct: 232 KTEVSWTSMLLGYTLSGRIE-DAEEFFEVMPMKPVIAC--------NAMIVGFGEVGEIS 282
Query: 364 NAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
A +VF M R+ TW MI Y +G AL LF +M G+ PS+ +L+S+LS
Sbjct: 283 KARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ--KQGVRPSFPSLISILSV 340
Query: 424 CSRAGAVESGMHIFESMKEIYRIEPGAEHY--ACVVDLLARSGLVDRAYEFIQNMPIHPT 481
C+ +++ G + + R + + Y + ++ + + G + +A + + +
Sbjct: 341 CATLASLQYGRQVH---AHLVRCQFDDDVYVASVLMTMYVKCGELVKA-KLVFDRFSSKD 396
Query: 482 ISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDS-GNHVVLSNMLAS---AGRWEEATI 537
I +W +++ HG LG+ A + E+ + N V L +L + AG+ EE
Sbjct: 397 IIMWNSIISGYASHG---LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLE 453
Query: 538 VRKEMK 543
+ + M+
Sbjct: 454 IFESME 459
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 144/333 (43%), Gaps = 22/333 (6%)
Query: 14 ESAVSTRSPLLGRAVHAQIIRSHE----TPL-PSFLCNHLINMYSKLDLLNSAQHVLSLT 68
++ VS S LLG + +I + E P+ P CN +I + ++ ++ A+ V L
Sbjct: 232 KTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLM 291
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
R TW +I G + AL F M++ V+P+ + + ++L G+
Sbjct: 292 EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGR 351
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
Q HA ++ DV+V MY K G V A+ +FD +++ WN+ IS G
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNAC--ADRL--GLHLGRQLHAFIIRSGYREDV 244
+A+ F E PN +T A L AC A +L GL + + + + E
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHY 471
Query: 245 SVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR 304
S +D G+ G V M + + W ++L A + H R L + A+
Sbjct: 472 SCT---VDMLGRAGQ-VDKAMELIESMTIKPDATVWGALLGA-CKTH--SRLDLAEVAAK 524
Query: 305 K--EAEP----TDFMISSVLSACAELGGLELGR 331
K E EP T ++SS+ ++ ++ G + + R
Sbjct: 525 KLFENEPDNAGTYVLLSSINASRSKWGDVAVVR 557
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 122/312 (39%), Gaps = 61/312 (19%)
Query: 133 LALKGGQIYDVFVGCS-AFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSL 191
L L+ + V CS S+ G +AR FD + + + +WN+ +S +G
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 192 DAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLI 251
+A F E E N +++ NGL+
Sbjct: 66 EARQLFDEM----SERNVVSW-----------------------------------NGLV 86
Query: 252 DFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD 311
Y K IV + VF + RNVV+W +M+ +Q A +F + E +
Sbjct: 87 SGYIKNRMIVEARNVFELM--PERNVVSWTAMVKGYMQEGMVGEAESLFWRM---PERNE 141
Query: 312 FMISSVLSACAELGGLELGRSVH-ALAVKACVDENIFVGSALVDLYGKC--GSIENAEQV 368
+ + + G ++ R ++ + VK V +G G C G ++ A +
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIG-------GLCREGRVDEARLI 194
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F EM +RN+VTW MI GY VD+A LFE M + V+ S+L + +G
Sbjct: 195 FDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP------EKTEVSWTSMLLGYTLSG 248
Query: 429 AVESGMHIFESM 440
+E FE M
Sbjct: 249 RIEDAEEFFEVM 260
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 18/205 (8%)
Query: 350 SALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCG 409
+++V Y G + A Q+F EM +RN+V+WN ++ GY + A +FE M
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP----- 106
Query: 410 IAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRA 469
+ V+ +++ + G V +F M E + + + L G +D+A
Sbjct: 107 -ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS-----WTVMFGGLIDDGRIDKA 160
Query: 470 YEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASA 529
+ MP+ ++ + G CR G+V +L D N V + M+
Sbjct: 161 RKLYDMMPVKDVVASTNMIGGLCRE------GRVDEARLI-FDEMRERNVVTWTTMITGY 213
Query: 530 GRWEEATIVRKEMKDIGIKKNVGYS 554
+ + RK + + K V ++
Sbjct: 214 RQNNRVDVARKLFEVMPEKTEVSWT 238
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/552 (39%), Positives = 318/552 (57%), Gaps = 36/552 (6%)
Query: 165 MFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG 224
+F + +L + A I+ A +G A + + L PN TF + L +C+ + G
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSG 145
Query: 225 LHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS----------- 273
+ +H +++ G D VA GL+D Y K GD+VS++ VF R+
Sbjct: 146 ----KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 274 ------------------RRNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPTDFM 313
R++V+W M+ Q+ A ++F L A + +P +
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 314 ISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP 373
+ + LSAC+++G LE GR +H + + N+ V + L+D+Y KCGS+E A VF++ P
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 374 QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG 433
+++IV WNAMI GYA G AL LF EM G G+ P+ +T + L AC+ AG V G
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ-GITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 434 MHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACR 493
+ IFESM + Y I+P EHY C+V LL R+G + RAYE I+NM + +W ++LG+C+
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 494 MHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGY 553
+HG LGK AE L L+ ++SG +V+LSN+ AS G +E VR MK+ GI K G
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 554 SWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASE 613
S I ++N+VH F+A D H K+ EI ML K+ E +K GY P+TN L DLE+ EK
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQS 560
Query: 614 VWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHR 673
+ HSE++A+A+GLI+ G P++I KNLR+C DCH+ K IS+I GR+I++RD NRFH
Sbjct: 561 LQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHH 620
Query: 674 FKDGWCSCKDYW 685
F DG CSC D+W
Sbjct: 621 FTDGSCSCGDFW 632
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 187/428 (43%), Gaps = 51/428 (11%)
Query: 5 PPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHV 64
PP L+ L++ + S L +HA I+R + P + +L ++ +H
Sbjct: 28 PPEKLAVLIDKSQSVDEVL---QIHAAILRHNLLLHPRYPVLNL-KLHRAYASHGKIRHS 83
Query: 65 LSLTHLRTVVTWTSLIAGCVN----NGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSS 120
L+L H +T+ L +N NG A L +V + + PN+FTF + K+ S+
Sbjct: 84 LALFH-QTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST 142
Query: 121 LQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLAT---- 176
+GK H LK G D +V D+Y+K G V A+ +FD MP+R+L +
Sbjct: 143 K----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAM 198
Query: 177 ---------------------------WNAYISNAVQDGRSLDAVGAFKEFLCV-HGEPN 208
WN I Q G DA+ F++ L +P+
Sbjct: 199 ITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPD 258
Query: 209 SITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFS 268
IT A L+AC+ L GR +H F+ S R +V V GLID Y KCG + + +VF+
Sbjct: 259 EITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFN 318
Query: 269 RIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPTDFMISSVLSACAELGG 326
R+++V W +M+A + + A +F +Q +PTD L ACA G
Sbjct: 319 --DTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376
Query: 327 LELG-RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVTWNAMI 384
+ G R ++ + + I LV L G+ G ++ A + M + V W++++
Sbjct: 377 VNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436
Query: 385 GGYAHQGD 392
G GD
Sbjct: 437 GSCKLHGD 444
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/562 (39%), Positives = 330/562 (58%), Gaps = 13/562 (2%)
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
K +++ + G I D VGC Y + G V A +FDEMP+R+L +WN+ IS
Sbjct: 56 KVVKSVSYRHGFIGDQLVGC-----YLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 188 GRSLDAVGAFKEFLC--VHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
G + V PN +TF + ++AC GR +H +++ G E+V
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVK 170
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK 305
V N I++YGK GD+ SS +F + S +N+V+W +M+ +QN E+ F +R+
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDL--SIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRR 228
Query: 306 EA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
EP +VL +C ++G + L + +H L + N + +AL+DLY K G +E+
Sbjct: 229 VGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLED 288
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
+ VF E+ + + W AM+ YA G A+ FE M GI+P +VT +L+AC
Sbjct: 289 SSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMV--HYGISPDHVTFTHLLNAC 346
Query: 425 SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
S +G VE G H FE+M + YRI+P +HY+C+VDLL RSGL+ AY I+ MP+ P+ +
Sbjct: 347 SHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGV 406
Query: 485 WGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKD 544
WGALLGACR++ T+LG AAE+LFEL+P D N+V+LSN+ +++G W++A+ +R MK
Sbjct: 407 WGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQ 466
Query: 545 IGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK-KAGYFPDTNLSLF 603
G+ + G S+I N++H F D SH ++ +IQ L ++R++MK + GY T L
Sbjct: 467 KGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLH 526
Query: 604 DLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREI 663
D+ ++ K + HSEKIA+AFGL+ + PI I KNLRICGDCH K IS I R I
Sbjct: 527 DVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRI 586
Query: 664 IVRDNNRFHRFKDGWCSCKDYW 685
I+RD+ RFH F DG CSC DYW
Sbjct: 587 IIRDSKRFHHFLDGSCSCSDYW 608
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 189/425 (44%), Gaps = 18/425 (4%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
+SSL+ + S S L R +H ++++S + F+ + L+ Y +L A+ +
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKS-VSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCV--QPNDFTF-----PCVFKASSSL 121
R +V+W SLI+G G M V +PN+ TF CV+ S
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE- 151
Query: 122 QMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYI 181
G+ H L +K G + +V V + + Y KTG + +F+++ +NL +WN I
Sbjct: 152 ----EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 182 SNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYR 241
+Q+G + + F V EP+ TF A L +C D + L + +H I+ G+
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267
Query: 242 EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF- 300
+ + L+D Y K G + S VF I + + + W +MLAA + A F
Sbjct: 268 GNKCITTALLDLYSKLGRLEDSSTVFHEI--TSPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 301 LQARKEAEPTDFMISSVLSACAELGGLELGRS-VHALAVKACVDENIFVGSALVDLYGKC 359
L P + +L+AC+ G +E G+ ++ + +D + S +VDL G+
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRS 385
Query: 360 GSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLV 418
G +++A + EMP + + W A++G D + E + +YV L
Sbjct: 386 GLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLS 445
Query: 419 SVLSA 423
++ SA
Sbjct: 446 NIYSA 450
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%)
Query: 300 FLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
FL D +SS+++A +EL R +H VK+ + F+G LV Y +
Sbjct: 20 FLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRL 79
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
G AE++F EMP+R++V+WN++I GY+ +G + + M + G P+ VT +S
Sbjct: 80 GHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLS 139
Query: 420 VLSACSRAGAVESG 433
++SAC G+ E G
Sbjct: 140 MISACVYGGSKEEG 153
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/536 (40%), Positives = 313/536 (58%), Gaps = 5/536 (0%)
Query: 151 DMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSI 210
+ YSK G AR +FD M +R+L +WN I ++ +A+ F E + +
Sbjct: 104 NAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEF 163
Query: 211 TFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI 270
T + L+AC ++LH +++ ++ V L+D Y KCG I + VF +
Sbjct: 164 TISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 223
Query: 271 GRSRRNVVTWCSMLAALVQNHEEERACLVFLQA-RKEAEPTDFMISSVLSACAELGGLEL 329
++ VTW SM+A VQN E A L++ +A R E F +SSV+ AC+ L L
Sbjct: 224 --QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 330 GRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAH 389
G+ +HA+ K+ N+FV S+ VD+Y KCGS+ + +FSE+ ++N+ WN +I G+A
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
+ LFE+M G+ P+ VT S+LS C G VE G F+ M+ Y + P
Sbjct: 342 HARPKEVMILFEKMQQD--GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPN 399
Query: 450 AEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLF 509
HY+C+VD+L R+GL+ AYE I+++P PT SIWG+LL +CR++ +L +VAAEKLF
Sbjct: 400 VVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLF 459
Query: 510 ELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKD 569
EL+PE++GNHV+LSN+ A+ +WEE RK ++D +KK G SWI +K++VH F +
Sbjct: 460 ELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGE 519
Query: 570 SSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIA 629
S H + EI + L L + +K GY P L D+E +K + HSEK+AL FGL+
Sbjct: 520 SGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMC 579
Query: 630 LPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
LP P+RI KNLRIC DCH +K S R IIVRD NRFH F DG CSC D+W
Sbjct: 580 LPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 185/373 (49%), Gaps = 5/373 (1%)
Query: 3 FHPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQ 62
F NL+ +L+ + + +A H +IIR + L N LIN YSK + A+
Sbjct: 58 FSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLL-NVLINAYSKCGFVELAR 116
Query: 63 HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQ 122
V R++V+W ++I N AL F+ MR + + ++FT V A
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176
Query: 123 MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYIS 182
+ K+ H L++K +++VG + D+Y+K G+ DA +F+ M ++ TW++ ++
Sbjct: 177 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVA 236
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
VQ+ +A+ ++ + E N T + + AC++ L G+Q+HA I +SG+
Sbjct: 237 GYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS 296
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
+V VA+ +D Y KCG + S ++FS + +N+ W ++++ ++ + ++F +
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEV--QEKNLELWNTIISGFAKHARPKEVMILFEK 354
Query: 303 ARKEA-EPTDFMISSVLSACAELGGLELGRSVHALA-VKACVDENIFVGSALVDLYGKCG 360
+++ P + SS+LS C G +E GR L + N+ S +VD+ G+ G
Sbjct: 355 MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414
Query: 361 SIENAEQVFSEMP 373
+ A ++ +P
Sbjct: 415 LLSEAYELIKSIP 427
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 313 MISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM 372
++ +L CA G + ++ H ++ ++ ++ + + L++ Y KCG +E A QVF M
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 373 PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS-RAGAVE 431
+R++V+WN MIG Y AL +F EM + G S T+ SVLSAC A+E
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMR--NEGFKFSEFTISSVLSACGVNCDALE 180
Query: 432 SGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGA 491
S+K I+ ++DL A+ G++ A + ++M +++ W +++
Sbjct: 181 CKKLHCLSVKTC--IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMVAG 237
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/707 (33%), Positives = 384/707 (54%), Gaps = 39/707 (5%)
Query: 13 LESAVSTRSPLLGRAVHAQIIR-SHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
L + +R+ G +H I++ + L F+ N L++ Y++ L+SA+ V R
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDL--FVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQPNDFTFPCVFKASSSLQMPITGKQA 130
VV+WTS+I G A+ F M RD V PN T CV A + L+ TG++
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 131 HALALKGG-QIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR 189
+A G ++ D+ V + DMY K A+ +FDE NL NA SN V+ G
Sbjct: 259 YAFIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 317
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
+ +A+G F + P+ I+ + +++C+ + G+ H +++R+G+ ++ N
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRS-----------------------------RRNVVTW 280
LID Y KC ++ +F R+ +N+V+W
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 281 CSMLAALVQNHEEERACLVF--LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAV 338
++++ LVQ E A VF +Q+++ + S+ SAC LG L+L + ++
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 339 KACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALG 398
K + ++ +G+ LVD++ +CG E+A +F+ + R++ W A IG A G+ + A+
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIE 557
Query: 399 LFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVD 458
LF++M G+ P V V L+ACS G V+ G IF SM +++ + P HY C+VD
Sbjct: 558 LFDDMI--EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 459 LLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGN 518
LL R+GL++ A + I++MP+ P IW +LL ACR+ G ++ AAEK+ L PE +G+
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 519 HVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEI 578
+V+LSN+ ASAGRW + VR MK+ G++K G S I ++ + H F + D SH + I
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Query: 579 QAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRI 638
+AML ++ + G+ PD + L D++++EK + HSEK+A+A+GLI+ G IRI
Sbjct: 736 EAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 795
Query: 639 TKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
KNLR+C DCHS KF S++ REII+RDNNRFH + G CSC D+W
Sbjct: 796 VKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/542 (26%), Positives = 233/542 (42%), Gaps = 77/542 (14%)
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAH 131
T + SLI G ++G A+L F+ M + P+ +TFP A + + G Q H
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 132 ALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSL 191
L +K G D+FV S Y++ G AR +FDEM +RN+ +W + I + +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 192 DAVGAFKEFLCVHGE---PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
DAV F F V E PNS+T ++ACA L G +++AFI SG + + +
Sbjct: 218 DAVDLF--FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEA 307
L+D Y KC I ++ +F G S ++ +M + V+ A VF L
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCN--AMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 308 EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQ 367
P + S +S+C++L + G+S H ++ + + +AL+D+Y KC + A +
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 368 VFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM---------------TLGSC---- 408
+F M + +VTWN+++ GY G+VD A FE M GS
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 409 -----------GIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVV 457
G+ VT++S+ SAC GA++ I+ + E I+ +V
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLV 512
Query: 458 DLLARSG-------------------------------LVDRAYEFIQNM---PIHPTIS 483
D+ +R G +RA E +M + P
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 484 IWGALLGACRMHGKTKLGK---VAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
+ L AC G + GK + KL + PED ++ + ++L AG EEA + +
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV-HYGCMVDLLGRAGLLEEAVQLIE 631
Query: 541 EM 542
+M
Sbjct: 632 DM 633
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 18/273 (6%)
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
C P+S+ C + D L + H + + G DVS L+ + G
Sbjct: 31 CTKATPSSLKNCKTI----DEL-----KMFHRSLTKQGLDNDVSTITKLVARSCELG--T 79
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC----LVFLQARKEA-EPTDFMISS 316
+ F++ C M +L++ + C L+FL+ P +
Sbjct: 80 RESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPF 139
Query: 317 VLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRN 376
LSACA+ G +H L VK +++FV ++LV Y +CG +++A +VF EM +RN
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN 199
Query: 377 IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
+V+W +MI GYA + A+ LF M + P+ VT+V V+SAC++ +E+G +
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLFFRMVRDE-EVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 437 FESMKEIYRIEPGAEHYACVVDLLARSGLVDRA 469
+ ++ IE + +VD+ + +D A
Sbjct: 259 YAFIRN-SGIEVNDLMVSALVDMYMKCNAIDVA 290
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/681 (34%), Positives = 375/681 (55%), Gaps = 14/681 (2%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLC-NHLINMYSKLDLLNSAQHVLSL 67
S LL + RS + + A +++S P+ + + L++ K ++ A+ V
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKS---GFPAEISGSKLVDASLKCGDIDYARQVFDG 124
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITG 127
R +VTW SLIA + + R A+ + M + V P+++T VFKA S L +
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 128 KQAHALA-LKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
+++H LA + G ++ +VFVG + DMY K G +A+ + D + ++++ A I Q
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
G +AV AF+ L +PN T+ + L +C + + G+ +H +++SG+ ++
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQA-RK 305
L+ Y +C + S VF I N V+W S+++ LVQN EE A + F + R
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCI--EYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD 362
Query: 306 EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENA 365
+P F +SS L C+ L E GR +H + K D + + GS L+DLYGKCG + A
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 366 EQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
VF + + ++++ N MI YA G AL LFE M + G+ P+ VT++SVL AC+
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI--NLGLQPNDVTVLSVLLACN 480
Query: 426 RAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIW 485
+ VE G +F+S ++ +I +HYAC+VDLL R+G ++ A E + I+P + +W
Sbjct: 481 NSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLW 538
Query: 486 GALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDI 545
LL AC++H K ++ + K+ E++P D G +++SN+ AS G+W ++ +MKD+
Sbjct: 539 RTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598
Query: 546 GIKKNVGYSWIAVKNRVHVFQAKD-SSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFD 604
+KKN SW+ + H F A D SH + +I L +L ++ K GY D + D
Sbjct: 599 KLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQD 658
Query: 605 LEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREII 664
+E+ K + HSEK+A+AF + G IRI KNLR+C DCHS IK +SR++ REII
Sbjct: 659 MEETAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREII 717
Query: 665 VRDNNRFHRFKDGWCSCKDYW 685
RD+ RFH F+DG CSC DYW
Sbjct: 718 CRDSKRFHHFRDGSCSCGDYW 738
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 153/314 (48%), Gaps = 11/314 (3%)
Query: 200 FLCVHGEPNSIT--FCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKC 257
LC+ + + T F L C D + + + A +++SG+ ++S + L+D KC
Sbjct: 54 LLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKC 112
Query: 258 GDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTDFMISS 316
GDI + VF G S R++VTW S++A L+++ + A ++ L P ++ +SS
Sbjct: 113 GDIDYARQVFD--GMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 317 VLSACAELGGLELGRSVHALAVKACVD-ENIFVGSALVDLYGKCGSIENAEQVFSEMPQR 375
V A ++L + + H LAV ++ N+FVGSALVD+Y K G A+ V + ++
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230
Query: 376 NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMH 435
++V A+I GY+ +G+ A+ F+ M + + P+ T SVL +C + +G
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEK--VQPNEYTYASVLISCGNLKDIGNGKL 288
Query: 436 IFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMH 495
I M + E ++ + R LVD + + + +P W +L+ +
Sbjct: 289 IHGLMVK-SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE-YPNQVSWTSLISGLVQN 346
Query: 496 GKTKLGKVAAEKLF 509
G+ ++ + K+
Sbjct: 347 GREEMALIEFRKMM 360
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/657 (36%), Positives = 369/657 (56%), Gaps = 51/657 (7%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N L++ Y K ++ A+ V L R VV+WT+L+ G V+NG+ A F M
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE---- 138
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMY------SKTGL- 158
K S + + G L+ G+I D C ++M ++T +
Sbjct: 139 ----------KNKVSWTVMLIG------FLQDGRIDD---ACKLYEMIPDKDNIARTSMI 179
Query: 159 -------RVD-ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSI 210
RVD AR +FDEM +R++ TW ++ Q+ R DA F V E +
Sbjct: 180 HGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD----VMPEKTEV 235
Query: 211 TFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI 270
++ + L + +L + + V N +I G+ G+I + VF +
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPV----KPVIACNAMISGLGQKGEIAKARRVFDSM 291
Query: 271 GRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLEL 329
RN +W +++ +N E A +F+ +K+ PT + S+LS CA L L
Sbjct: 292 --KERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHH 349
Query: 330 GRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAH 389
G+ VHA V+ D +++V S L+ +Y KCG + ++ +F P ++I+ WN++I GYA
Sbjct: 350 GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYAS 409
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
G + AL +F EM L S P+ VT V+ LSACS AG VE G+ I+ESM+ ++ ++P
Sbjct: 410 HGLGEEALKVFCEMPL-SGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPI 468
Query: 450 AEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLF 509
HYAC+VD+L R+G + A E I +M + P ++WG+LLGACR H + + + A+KL
Sbjct: 469 TAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLI 528
Query: 510 ELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVF-QAK 568
E++PE+SG +++LSNM AS GRW + +RK MK ++K+ G SW V+N+VH F +
Sbjct: 529 EIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGG 588
Query: 569 DSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLI 628
+SH + I +L +L +++AGY PD + +L D+++EEK + + YHSE++A+A+ L+
Sbjct: 589 INSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALL 648
Query: 629 ALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
L G+PIR+ KNLR+C DCH+AIK IS++ REII+RD NRFH F++G CSCKDYW
Sbjct: 649 KLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 121/549 (22%), Positives = 220/549 (40%), Gaps = 102/549 (18%)
Query: 28 VHAQII--RSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVN 85
+ +QI+ R++ T +P N I S++ ++ A+ + +++ +W S++AG
Sbjct: 1 MKSQILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAG--- 57
Query: 86 NGRFVAALLHFVN-MRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
+F N M RD + D +MP + + G
Sbjct: 58 ---------YFANLMPRDARKLFD-------------EMPDRNIISWNGLVSG------- 88
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
Y K G +AR +FD MP+RN+ +W A + V +G+ V +
Sbjct: 89 --------YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK----VDVAESLFWKM 136
Query: 205 GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSE 264
E N +++ L + +L+ I S+ +GL K G + +
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC----KEGRVDEAR 192
Query: 265 MVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAEL 324
+F + S R+V+TW +M+ QN+ + A +F E T+ +S+L +
Sbjct: 193 EIFDEM--SERSVITWTTMVTGYGQNNRVDDARKIFDVM---PEKTEVSWTSMLMGYVQN 247
Query: 325 GGLELGRSV-HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAM 383
G +E + + VK + N A++ G+ G I A +VF M +RN +W +
Sbjct: 248 GRIEDAEELFEVMPVKPVIACN-----AMISGLGQKGEIAKARRVFDSMKERNDASWQTV 302
Query: 384 IGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM--- 440
I + G AL LF + + G+ P++ TL+S+LS C+ ++ G + +
Sbjct: 303 IKIHERNGFELEALDLF--ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC 360
Query: 441 -------------------------KEIYRIEPGAE--HYACVVDLLARSGLVDRAYEFI 473
K I+ P + + ++ A GL + A +
Sbjct: 361 QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVF 420
Query: 474 QNMPI----HPTISIWGALLGACRMHGKTKLG-KV--AAEKLFELDPEDSGNHVVLSNML 526
MP+ P + A L AC G + G K+ + E +F + P + ++ + +ML
Sbjct: 421 CEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP-ITAHYACMVDML 479
Query: 527 ASAGRWEEA 535
AGR+ EA
Sbjct: 480 GRAGRFNEA 488
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 6/213 (2%)
Query: 14 ESAVSTRSPLLGRAVHAQIIRSHE----TPL-PSFLCNHLINMYSKLDLLNSAQHVLSLT 68
++ VS S L+G + +I + E P+ P CN +I+ + + A+ V
Sbjct: 232 KTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSM 291
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
R +W ++I NG + AL F+ M++ V+P T + +SL GK
Sbjct: 292 KERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGK 351
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
Q HA ++ DV+V MY K G V ++ +FD P +++ WN+ IS G
Sbjct: 352 QVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHG 411
Query: 189 RSLDAVGAFKEF-LCVHGEPNSITFCAFLNACA 220
+A+ F E L +PN +TF A L+AC+
Sbjct: 412 LGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/600 (36%), Positives = 337/600 (56%), Gaps = 13/600 (2%)
Query: 89 FVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCS 148
F ++ + +M R P+ F+FP + K+ +SL +P++G+Q H KGG + FV +
Sbjct: 34 FSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTA 93
Query: 149 AFDMYSKTGLRVDARNMFDEMPQRNLAT--WNAYISNAVQDGRSLDAVGAFKEFLCVHGE 206
MY K GL DAR +F+E PQ + + +NA IS + + DA F+
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
+S+T + C L LGR LH ++ G +V+V N I Y KCG + + +
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRL 213
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE-PTDFMISSVLSACAELG 325
F + + ++TW ++++ QN ++ Q + P F + SVLS+CA LG
Sbjct: 214 FDEM--PVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 326 GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIG 385
++G V L N+FV +A + +Y +CG++ A VF MP +++V+W AMIG
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 386 GYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYR 445
Y G ++ L LF++M GI P V VLSACS +G + G+ +F +MK Y+
Sbjct: 332 CYGMHGMGEIGLMLFDDMI--KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 389
Query: 446 IEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAA 505
+EPG EHY+C+VDLL R+G +D A EFI++MP+ P ++WGALLGAC++H + ++A
Sbjct: 390 LEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449
Query: 506 EKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVF 565
K+ E +P + G +V++SN+ + + E +R M++ +K GYS++ K RVH+F
Sbjct: 450 AKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLF 509
Query: 566 QAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAF 625
A D SHE+ E+ ML +L + + D + EE +S HSE++A+AF
Sbjct: 510 LAGDRSHEQTEEVHRMLDELETSVMELAGNMDCD------RGEEVSSTTREHSERLAIAF 563
Query: 626 GLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
G++ G I + KNLR+C DCH +K +S+IV R+ +VRD +RFH FKDG CSCKDYW
Sbjct: 564 GILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 14/294 (4%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
LGR++H Q ++ + L N I MY K + + + + ++ ++TW ++I+G
Sbjct: 174 LGRSLHGQCVKGGLDSEVAVL-NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGY 232
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
NG L + M+ V P+ FT V + + L G + L G + +V
Sbjct: 233 SQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV 292
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
FV ++ MY++ G AR +FD MP ++L +W A I G + F + +
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG------LIDFYGKC 257
P+ F L+AC+ H G + + + + G L+D G+
Sbjct: 353 GIRPDGAVFVMVLSACS-----HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRA 407
Query: 258 GDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD 311
G + M F + W ++L A + + A L F + E EP +
Sbjct: 408 GRL-DEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKV-IEFEPNN 459
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/706 (33%), Positives = 383/706 (54%), Gaps = 39/706 (5%)
Query: 13 LESAVSTRSPLLGRAVHAQIIR-SHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
L + +R+ G +H I++ + L F+ N L++ Y++ L+SA+ V R
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDL--FVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQPNDFTFPCVFKASSSLQMPITGKQA 130
VV+WTS+I G A+ F M RD V PN T CV A + L+ TG++
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 131 HALALKGG-QIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR 189
+A G ++ D+ V + DMY K A+ +FDE NL NA SN V+ G
Sbjct: 259 YAFIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 317
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
+ +A+G F + P+ I+ + +++C+ + G+ H +++R+G+ ++ N
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRS-----------------------------RRNVVTW 280
LID Y KC ++ +F R+ +N+V+W
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 281 CSMLAALVQNHEEERACLVF--LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAV 338
++++ LVQ E A VF +Q+++ + S+ SAC LG L+L + ++
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 339 KACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALG 398
K + ++ +G+ LVD++ +CG E+A +F+ + R++ W A IG A G+ + A+
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIE 557
Query: 399 LFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVD 458
LF++M G+ P V V L+ACS G V+ G IF SM +++ + P HY C+VD
Sbjct: 558 LFDDMI--EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 459 LLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGN 518
LL R+GL++ A + I++MP+ P IW +LL ACR+ G ++ AAEK+ L PE +G+
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 519 HVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEI 578
+V+LSN+ ASAGRW + VR MK+ G++K G S I ++ + H F + D SH + I
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Query: 579 QAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRI 638
+AML ++ + G+ PD + L D++++EK + HSEK+A+A+GLI+ G IRI
Sbjct: 736 EAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 795
Query: 639 TKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDY 684
KNLR+C DCHS KF S++ REII+RDNNRFH + G CSC D+
Sbjct: 796 VKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/542 (26%), Positives = 233/542 (42%), Gaps = 77/542 (14%)
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAH 131
T + SLI G ++G A+L F+ M + P+ +TFP A + + G Q H
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 132 ALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSL 191
L +K G D+FV S Y++ G AR +FDEM +RN+ +W + I + +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 192 DAVGAFKEFLCVHGE---PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
DAV F F V E PNS+T ++ACA L G +++AFI SG + + +
Sbjct: 218 DAVDLF--FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEA 307
L+D Y KC I ++ +F G S ++ +M + V+ A VF L
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCN--AMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 308 EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQ 367
P + S +S+C++L + G+S H ++ + + +AL+D+Y KC + A +
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 368 VFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM---------------TLGSC---- 408
+F M + +VTWN+++ GY G+VD A FE M GS
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 409 -----------GIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVV 457
G+ VT++S+ SAC GA++ I+ + E I+ +V
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLV 512
Query: 458 DLLARSG-------------------------------LVDRAYEFIQNM---PIHPTIS 483
D+ +R G +RA E +M + P
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 484 IWGALLGACRMHGKTKLGK---VAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
+ L AC G + GK + KL + PED ++ + ++L AG EEA + +
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV-HYGCMVDLLGRAGLLEEAVQLIE 631
Query: 541 EM 542
+M
Sbjct: 632 DM 633
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 18/273 (6%)
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
C P+S+ C + D L + H + + G DVS L+ + G
Sbjct: 31 CTKATPSSLKNCKTI----DEL-----KMFHRSLTKQGLDNDVSTITKLVARSCELG--T 79
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC----LVFLQARKEA-EPTDFMISS 316
+ F++ C M +L++ + C L+FL+ P +
Sbjct: 80 RESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPF 139
Query: 317 VLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRN 376
LSACA+ G +H L VK +++FV ++LV Y +CG +++A +VF EM +RN
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN 199
Query: 377 IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
+V+W +MI GYA + A+ LF M + P+ VT+V V+SAC++ +E+G +
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLFFRMVRDE-EVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 437 FESMKEIYRIEPGAEHYACVVDLLARSGLVDRA 469
+ ++ IE + +VD+ + +D A
Sbjct: 259 YAFIRN-SGIEVNDLMVSALVDMYMKCNAIDVA 290
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/694 (35%), Positives = 365/694 (52%), Gaps = 27/694 (3%)
Query: 7 NLLSSLLESAVSTRSPL--LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHV 64
NL+S L V TR L G VH +++S + L N+LI+MY K A V
Sbjct: 8 NLVSIL---RVCTRKGLSDQGGQVHCYLLKSG-SGLNLITSNYLIDMYCKCREPLMAYKV 63
Query: 65 LSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMP 124
R VV+W++L++G V NG +L F M R + PN+FTF KA L
Sbjct: 64 FDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNAL 123
Query: 125 ITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNA 184
G Q H LK G V VG S DMYSK G +A +F + R+L +WNA I+
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 185 VQDG---RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYR 241
V G ++LD G +E + P+ T + L AC+ ++ G+Q+H F++RSG+
Sbjct: 184 VHAGYGSKALDTFGMMQE-ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 242 --EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLV 299
++ L+D Y KCG + S+ F +I + +++W S++ Q E A +
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQI--KEKTMISWSSLILGYAQEGEFVEAMGL 300
Query: 300 FLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGK 358
F + ++ D F +SS++ A+ L G+ + ALAVK V +++VD+Y K
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 360
Query: 359 CGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLV 418
CG ++ AE+ F+EM +++++W +I GY G ++ +F EM + I P V +
Sbjct: 361 CGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN--IEPDEVCYL 418
Query: 419 SVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPI 478
+VLSACS +G ++ G +F + E + I+P EHYACVVDLL R+G + A I MPI
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 479 HPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIV 538
P + IW LL CR+HG +LGK + L +D ++ N+V++SN+ AG W E
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNA 538
Query: 539 RKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLA----KLREEMKKAGY 594
R+ G+KK G SW+ ++ VH F++ + SH IQ L +LREE+ GY
Sbjct: 539 RELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREEL---GY 595
Query: 595 FPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIA---LPHGVPIRITKNLRICGDCHSA 651
L D++DE K + HSEK+A+ L G IR+ KNLR+C DCH
Sbjct: 596 VYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEF 655
Query: 652 IKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
IK +S+I +VRD RFH F+DG CSC DYW
Sbjct: 656 IKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/462 (42%), Positives = 290/462 (62%), Gaps = 4/462 (0%)
Query: 225 LHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSML 284
+ LG +H+ +IRSG+ + V N L+ Y CGD+ S+ VF ++ +++V W S++
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM--PEKDLVAWNSVI 61
Query: 285 AALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVD 343
+N + E A ++ + K +P F I S+LSACA++G L LG+ VH +K +
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM 403
N+ + L+DLY +CG +E A+ +F EM +N V+W ++I G A G A+ LF+ M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
+ G+ P +T V +L ACS G V+ G F M+E Y+IEP EH+ C+VDLLAR+
Sbjct: 182 E-STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 464 GLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLS 523
G V +AYE+I++MP+ P + IW LLGAC +HG + L + A ++ +L+P SG++V+LS
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 524 NMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLA 583
NM AS RW + +RK+M G+KK G+S + V NRVH F D SH ++ I A L
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 360
Query: 584 KLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLR 643
++ ++ GY P + D+E+EEK + V YHSEKIA+AF LI+ P PI + KNLR
Sbjct: 361 EMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLR 420
Query: 644 ICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
+C DCH AIK +S++ REI+VRD +RFH FK+G CSC+DYW
Sbjct: 421 VCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 139/274 (50%), Gaps = 6/274 (2%)
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
G+ H++ ++ G ++V S +Y+ G A +FD+MP+++L WN+ I+ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
+G+ +A+ + E +P+ T + L+ACA L LG+++H ++I+ G ++
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQAR 304
+N L+D Y +CG + ++ +F + +N V+W S++ L N + A +F +++
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEM--VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 305 KEAEPTDFMISSVLSACAELGGLELG-RSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
+ P + +L AC+ G ++ G + + ++ I +VDL + G ++
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 364 NAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMA 396
A + MP Q N+V W ++G GD D+A
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 105/187 (56%), Gaps = 15/187 (8%)
Query: 324 LGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAM 383
+ + LG ++H++ +++ I+V ++L+ LY CG + +A +VF +MP++++V WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 384 IGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI 443
I G+A G + AL L+ EM S GI P T+VS+LSAC++ GA+ G + +
Sbjct: 61 INGFAENGKPEEALALYTEMN--SKGIKPDGFTIVSLLSACAKIGALTLGKRV-----HV 113
Query: 444 YRIEPGAE---HYACV-VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
Y I+ G H + V +DL AR G V+ A M ++S W +L+ ++G
Sbjct: 114 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS-WTSLIVGLAVNG--- 169
Query: 500 LGKVAAE 506
GK A E
Sbjct: 170 FGKEAIE 176
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 14/270 (5%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
LG +H+ +IRS L ++ N L+++Y+ + SA V + +V W S+I G
Sbjct: 6 LGETIHSVVIRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
NG+ AL + M ++P+ FT + A + + GK+ H +K G ++
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
D+Y++ G +A+ +FDEM +N +W + I +G +A+ FK
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 204 HG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVA------NGLIDFYGK 256
G P ITF L AC+ H G F RE+ + ++D +
Sbjct: 185 EGLLPCEITFVGILYACS-----HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 257 CGDIVSSEMVFSRIGRSRRNVVTWCSMLAA 286
G V + + + NVV W ++L A
Sbjct: 240 AGQ-VKKAYEYIKSMPMQPNVVIWRTLLGA 268
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/537 (40%), Positives = 310/537 (57%), Gaps = 10/537 (1%)
Query: 150 FDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNS 209
+MY K L DA +FD+MPQRN+ +W IS + A+ L + PN
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162
Query: 210 ITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSR 269
T+ + L +C G+ R LH II+ G DV V + LID + K G+ + VF
Sbjct: 163 YTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 270 IGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGGLE 328
+ + + W S++ QN + A +F + ++ + ++SVL AC L LE
Sbjct: 220 MVTG--DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 329 LGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYA 388
LG H VK D+++ + +ALVD+Y KCGS+E+A +VF++M +R+++TW+ MI G A
Sbjct: 278 LGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 389 HQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEP 448
G AL LFE M S G P+Y+T+V VL ACS AG +E G + F SMK++Y I+P
Sbjct: 336 QNGYSQEALKLFERMK--SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 449 GAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKL 508
EHY C++DLL ++G +D A + + M P W LLGACR+ L + AA+K+
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 453
Query: 509 FELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAK 568
LDPED+G + +LSN+ A++ +W+ +R M+D GIKK G SWI V ++H F
Sbjct: 454 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 513
Query: 569 DSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLI 628
D+SH + E+ L +L + GY P+TN L DLE E+ + +HSEK+ALAFGL+
Sbjct: 514 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573
Query: 629 ALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
LP IRI KNLRICGDCH K S++ R I++RD R+H F+DG CSC DYW
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 208/428 (48%), Gaps = 17/428 (3%)
Query: 10 SSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTH 69
S L++ +S R+ G + + + P+ FL N LINMY K +LLN A +
Sbjct: 65 SELIKCCISNRAVHEGNLICRHLYFNGHRPM-MFLVNVLINMYVKFNLLNDAHQLFDQMP 123
Query: 70 LRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQ 129
R V++WT++I+ AL V M RD V+PN +T+ V ++ + + +
Sbjct: 124 QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS---DVRM 180
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR 189
H +K G DVFV + D+++K G DA ++FDEM + WN+ I Q+ R
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
S A+ FK T + L AC L LG Q H I++ Y +D+ + N
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNA 298
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE-AE 308
L+D Y KCG + + VF+++ R+V+TW +M++ L QN + A +F + + +
Sbjct: 299 LVDMYCKCGSLEDALRVFNQM--KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 309 PTDFMISSVLSACAELGGLELG----RSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
P I VL AC+ G LE G RS+ L V E+ ++DL GK G +++
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY---GCMIDLLGKAGKLDD 413
Query: 365 AEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
A ++ +EM + + VTW ++G Q ++ +A +++ A +Y L ++ +
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYAN 473
Query: 424 CSRAGAVE 431
+ +VE
Sbjct: 474 SQKWDSVE 481
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 174/377 (46%), Gaps = 55/377 (14%)
Query: 208 NSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVF 267
+S T+ + C +H G + + +G+R + + N LI+ Y K + + +F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 268 SRIGRSRRNVVTWCSMLAALVQNHEEERAC-LVFLQARKEAEPTDFMISSVLSACAELGG 326
++ +RNV++W +M++A + ++A L+ L R P + SSVL +C G
Sbjct: 120 DQM--PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NG 174
Query: 327 LELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGG 386
+ R +H +K ++ ++FV SAL+D++ K G E+A VF EM + + WN++IGG
Sbjct: 175 MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG 234
Query: 387 YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS--------------------- 425
+A D+AL LF+ M G TL SVL AC+
Sbjct: 235 FAQNSRSDVALELFKRMK--RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQD 292
Query: 426 ------------RAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFI 473
+ G++E + +F MKE I ++ ++ LA++G A +
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMKERDVIT-----WSTMISGLAQNGYSQEALKLF 347
Query: 474 QNMPIHPT----ISIWGALLGACRMHGKTKLGKV---AAEKLFELDPEDSGNHVVLSNML 526
+ M T I+I G L AC G + G + +KL+ +DP ++ + ++L
Sbjct: 348 ERMKSSGTKPNYITIVGVLF-ACSHAGLLEDGWYYFRSMKKLYGIDPVRE-HYGCMIDLL 405
Query: 527 ASAGRWEEATIVRKEMK 543
AG+ ++A + EM+
Sbjct: 406 GKAGKLDDAVKLLNEME 422
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/533 (38%), Positives = 325/533 (60%), Gaps = 10/533 (1%)
Query: 159 RVD-ARNMFDEMPQRNLAT---WNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCA 214
R+D AR +FD++ +L T W A ++G DA+ + + LC EP + +
Sbjct: 182 RLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISV 241
Query: 215 FLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR 274
L AC D L +GR +HA I++ + D V N L+ Y + G + VF G S
Sbjct: 242 ALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFD--GMSE 299
Query: 275 RNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDF-MISSVLSACAELGGLELGRSV 333
RNVVTW S+++ L + +F + ++E + ++++L AC+ + L G+ +
Sbjct: 300 RNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEI 359
Query: 334 HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDV 393
HA +K+ ++ + ++L+D+YGKCG +E + +VF M +++ +WN M+ YA G++
Sbjct: 360 HAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNI 419
Query: 394 DMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHY 453
+ + LFE M G+AP +T V++LS CS G E G+ +FE MK +R+ P EHY
Sbjct: 420 EEVINLFEWMI--ESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHY 477
Query: 454 ACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDP 513
AC+VD+L R+G + A + I+ MP P+ SIWG+LL +CR+HG +G++AA++LF L+P
Sbjct: 478 ACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEP 537
Query: 514 EDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHE 573
+ GN+V++SN+ A A W+ +R+ MK G+KK G SW+ VK+++ +F A
Sbjct: 538 HNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEF 597
Query: 574 KNS-EIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPH 632
+NS E + + +L+E ++K+GY P+T++ L D+++E KA+ V HSE++A + LI
Sbjct: 598 RNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGE 657
Query: 633 GVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
GVPIRITKNLR+C DCHS +K +S++ R I++RD RFH F DG CSCKDYW
Sbjct: 658 GVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 181/397 (45%), Gaps = 8/397 (2%)
Query: 6 PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYS---KLDLLNSAQ 62
P + LL + +S +S G + + I+ + L + LI ++S +LDL
Sbjct: 131 PEAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIF 190
Query: 63 HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQ 122
++ + L T W ++ G NG AL+ +V+M ++P +F+ KA L+
Sbjct: 191 DDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLK 250
Query: 123 MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYIS 182
G+ HA +K + D V +Y ++GL DAR +FD M +RN+ TWN+ IS
Sbjct: 251 DLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLIS 310
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
+ R + F++ + T L AC+ L G+++HA I++S +
Sbjct: 311 VLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKP 370
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-L 301
DV + N L+D YGKCG++ S VF + +++ +W ML N E +F
Sbjct: 371 DVPLLNSLMDMYGKCGEVEYSRRVFDVM--LTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 302 QARKEAEPTDFMISSVLSACAELGGLELGRSV-HALAVKACVDENIFVGSALVDLYGKCG 360
P ++LS C++ G E G S+ + + V + + LVD+ G+ G
Sbjct: 429 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAG 488
Query: 361 SIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMA 396
I+ A +V MP + + W +++ G+V +
Sbjct: 489 KIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVG 525
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/685 (33%), Positives = 373/685 (54%), Gaps = 17/685 (2%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
L ++L R LG+ VH ++ L N L++MYSK + +AQ + +
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLDK-ELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRR--DCVQPNDFTF----PCVFKASSSLQ 122
+ + VV+W +++ G G M + V+ ++ T P F S
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF--- 410
Query: 123 MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYIS 182
+P + K+ H +LK +Y+ V + Y+K G A+ +F + + + +WNA I
Sbjct: 411 LP-SLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
Q ++ A + P+S T C+ L+AC+ L LG+++H FIIR+
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
D+ V ++ Y CG++ + + +F + +++V+W +++ +QN +RA VF Q
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAM--EDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 303 -ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
+ + V AC+ L L LGR HA A+K ++++ F+ +L+D+Y K GS
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 362 IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
I + +VF+ + +++ +WNAMI GY G A+ LFEEM G P +T + VL
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ--RTGHNPDDLTFLGVL 705
Query: 422 SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFI-QNMPIHP 480
+AC+ +G + G+ + MK + ++P +HYACV+D+L R+G +D+A + + M
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Query: 481 TISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
+ IW +LL +CR+H ++G+ A KLFEL+PE N+V+LSN+ A G+WE+ VR+
Sbjct: 766 DVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825
Query: 541 EMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNL 600
M ++ ++K+ G SWI + +V F + + EI+++ + L ++ K GY PDT
Sbjct: 826 RMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMS 885
Query: 601 SLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVG 660
DL +EEK ++ HSEK+AL +GLI G IR+ KNLRIC DCH+A K IS+++
Sbjct: 886 VQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVME 945
Query: 661 REIIVRDNNRFHRFKDGWCSCKDYW 685
REI+VRDN RFH FK+G CSC DYW
Sbjct: 946 REIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 155/632 (24%), Positives = 279/632 (44%), Gaps = 64/632 (10%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
L LL+++ + +GR +H + S LC +I MY+ + ++ V
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQPNDFTFPCVFKASSSLQMPITG 127
+ + W ++I+ N + L F+ M + P+ FT+PCV KA + + G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
H L +K G + DVFVG + Y G DA +FD MP+RNL +WN+ I +
Sbjct: 207 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 188 GRSLDAVGAFKEFLCVHGE----PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRED 243
G S ++ E + +G+ P+ T L CA + LG+ +H + ++ ++
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 244 VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALV---QNHEEERACLVF 300
+ + N L+D Y KCG I +++M+F + +NVV+W +M+ H
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKM--NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 301 LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
L ++ + + I + + C L + +H ++K N V +A V Y KCG
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 361 SIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
S+ A++VF + + + +WNA+IGG+A D ++L +M + G+ P T+ S+
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS--GLLPDSFTVCSL 502
Query: 421 LSACSRAGAVESG---------------MHIFESMKEIY---------------RIEPGA 450
LSACS+ ++ G + ++ S+ +Y +
Sbjct: 503 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 451 EHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWG----ALLGACRMHGKTKLGKVA-A 505
+ V+ ++G DRA + M ++ I + G + GAC + +LG+ A A
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLY-GIQLCGISMMPVFGACSLLPSLRLGREAHA 621
Query: 506 EKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVF 565
L L +D+ L +M A G +++ V +K+ K ++ + + +H
Sbjct: 622 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE---KSTASWNAMIMGYGIHGL 678
Query: 566 QAKDSSHEKNSEIQAMLAKLREEMKKAGYFPD 597
AK++ KL EEM++ G+ PD
Sbjct: 679 -AKEA------------IKLFEEMQRTGHNPD 697
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/679 (34%), Positives = 358/679 (52%), Gaps = 20/679 (2%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
L E+ RS GR +H ++ E P L N ++ MY + L A +
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENP-SVLLQNCVLQMYCECRSLEDADKLFDEMSEL 147
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAH 131
V+ T++I+ G A+ F M +P + + K+ + + G+Q H
Sbjct: 148 NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIH 207
Query: 132 ALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSL 191
A ++ G + + +MY K G V A+ +FD+M + + Q GR+
Sbjct: 208 AHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRAR 267
Query: 192 DAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLI 251
DA+ F + + E +S F L ACA L+LG+Q+HA + + G +VSV L+
Sbjct: 268 DALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLV 327
Query: 252 DFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEP 309
DFY KC S+ F I N V+W ++++ Q + E A F L+++ +
Sbjct: 328 DFYIKCSSFESACRAFQEI--REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL 385
Query: 310 TDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVF 369
F +S+ AC+ L +G VHA A+K + + + SAL+ +Y KCG +++A +VF
Sbjct: 386 NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVF 445
Query: 370 SEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGA 429
M +IV W A I G+A+ G+ AL LFE+M SCG+ P+ VT ++VL+ACS AG
Sbjct: 446 ESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV--SCGMKPNSVTFIAVLTACSHAGL 503
Query: 430 VESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALL 489
VE G H ++M Y + P +HY C++D+ ARSGL+D A +F++NMP P W L
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 490 GACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKK 549
C H +LG++A E+L +LDPED+ +V+ N+ AG+WEEA + K M + +KK
Sbjct: 564 SGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Query: 550 NVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEE 609
+ SWI K ++H F D H + EI E++K+ F + + +F E
Sbjct: 624 ELSCSWIQEKGKIHRFIVGDKHHPQTQEIY-------EKLKEFDGFMEGD--MFQCNMTE 674
Query: 610 KASEVWYHSEKIALAFGLIALPHG---VPIRITKNLRICGDCHSAIKFISRIVGREIIVR 666
+ ++ HSE++A+AFGLI++ HG PI++ KNLR C DCH K +S + G EI++R
Sbjct: 675 RREQLLDHSERLAIAFGLISV-HGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIR 733
Query: 667 DNNRFHRFKDGWCSCKDYW 685
D+ RFH FK+G CSC DYW
Sbjct: 734 DSRRFHHFKEGKCSCNDYW 752
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 191/414 (46%), Gaps = 12/414 (2%)
Query: 99 MRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGL 158
M + V + +++ C+F+A L+ G+ H G + V + MY +
Sbjct: 74 MDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRS 133
Query: 159 RVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNA 218
DA +FDEM + N + IS + G AVG F L +P S + L +
Sbjct: 134 LEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKS 193
Query: 219 CADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV 278
+ L GRQ+HA +IR+G + S+ G+++ Y KCG +V ++ VF ++ +
Sbjct: 194 LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAC 253
Query: 279 TWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALA 337
T ++ Q A +F+ E E F+ S VL ACA L L LG+ +HA
Sbjct: 254 T--GLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACV 311
Query: 338 VKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMAL 397
K ++ + VG+ LVD Y KC S E+A + F E+ + N V+W+A+I GY + A+
Sbjct: 312 AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAV 371
Query: 398 GLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEH-YACV 456
F+ + + I S+ T S+ ACS G + I R G+++ + +
Sbjct: 372 KTFKSLRSKNASILNSF-TYTSIFQACSVLADCNIGGQVHADA--IKRSLIGSQYGESAL 428
Query: 457 VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE 510
+ + ++ G +D A E ++M +P I W A + +G A +LFE
Sbjct: 429 ITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNAS----EALRLFE 477
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 177/392 (45%), Gaps = 19/392 (4%)
Query: 5 PPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNH------LINMYSKLDLL 58
P ++ ++LL+S V+ R+ GR +HA +IR+ LC++ ++NMY K L
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG-------LCSNTSIETGIVNMYVKCGWL 235
Query: 59 NSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKAS 118
A+ V ++ V T L+ G GR AL FV++ + V+ + F F V KA
Sbjct: 236 VGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKAC 295
Query: 119 SSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWN 178
+SL+ GKQ HA K G +V VG D Y K A F E+ + N +W+
Sbjct: 296 ASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWS 355
Query: 179 AYISNAVQDGRSLDAVGAFKEFLCVHGEP-NSITFCAFLNACADRLGLHLGRQLHAFIIR 237
A IS Q + +AV FK + NS T+ + AC+ ++G Q+HA I+
Sbjct: 356 AIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK 415
Query: 238 SGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC 297
+ LI Y KCG + + VF + ++V W + ++ A
Sbjct: 416 RSLIGSQYGESALITMYSKCGCLDDANEVFESMDNP--DIVAWTAFISGHAYYGNASEAL 473
Query: 298 LVFLQARK-EAEPTDFMISSVLSACAELGGLELGR-SVHALAVKACVDENIFVGSALVDL 355
+F + +P +VL+AC+ G +E G+ + + K V I ++D+
Sbjct: 474 RLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDI 533
Query: 356 YGKCGSIENAEQVFSEMP-QRNIVTWNAMIGG 386
Y + G ++ A + MP + + ++W + G
Sbjct: 534 YARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/575 (38%), Positives = 328/575 (57%), Gaps = 9/575 (1%)
Query: 114 VFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRN 173
+ +ASSS P K+ HA+ L+ G + + G AR +FDEM +
Sbjct: 16 LLRASSS--KPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR 73
Query: 174 LATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHA 233
+ WN V++ +++ +K+ + P+ T+ + A + G LHA
Sbjct: 74 IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 234 FIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEE 293
+++ G+ VA L+ Y K G++ S+E +F + +++V W + LA VQ
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM--QVKDLVAWNAFLAVCVQTGNS 191
Query: 294 ERACLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSAL 352
A F + +A D F + S+LSAC +LG LE+G ++ A K +D NI V +A
Sbjct: 192 AIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENAR 251
Query: 353 VDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAP 412
+D++ KCG+ E A +F EM QRN+V+W+ MI GYA GD AL LF T+ + G+ P
Sbjct: 252 LDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLF--TTMQNEGLRP 309
Query: 413 SYVTLVSVLSACSRAGAVESGMHIFESMKEI--YRIEPGAEHYACVVDLLARSGLVDRAY 470
+YVT + VLSACS AG V G F M + +EP EHYAC+VDLL RSGL++ AY
Sbjct: 310 NYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAY 369
Query: 471 EFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAG 530
EFI+ MP+ P IWGALLGAC +H LG+ A+ L E P+ HV+LSN+ A+AG
Sbjct: 370 EFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAG 429
Query: 531 RWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK 590
+W+ VR +M+ +G KK YS + + ++H F D SH ++ I L ++ ++++
Sbjct: 430 KWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIR 489
Query: 591 KAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHS 650
K GY PDT D+E EEK + +HSEK+A+AFGLI G PIR+ KNLR C DCH+
Sbjct: 490 KMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHA 549
Query: 651 AIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
KF+S + EII+RD NRFH F++G CSCK++W
Sbjct: 550 FSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 200/431 (46%), Gaps = 12/431 (2%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS 66
+LS LL + S+ P + +HA ++R+ + S L L N+ D+ A+ V
Sbjct: 11 QMLSELLRA--SSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMC-YARQVFD 67
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
H + W +L G V N +LL + MR V+P++FT+P V KA S L
Sbjct: 68 EMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSC 127
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
G HA +K G V MY K G A +F+ M ++L WNA+++ VQ
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
G S A+ F + + +S T + L+AC L +G +++ + ++ V
Sbjct: 188 TGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIV 247
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE 306
N +D + KCG+ ++ ++F + +RNVV+W +M+ N + A +F + E
Sbjct: 248 ENARLDMHLKCGNTEAARVLFEEM--KQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNE 305
Query: 307 A-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVG----SALVDLYGKCGS 361
P VLSAC+ G + G+ +L V++ D+N+ + +VDL G+ G
Sbjct: 306 GLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN-DKNLEPRKEHYACMVDLLGRSGL 364
Query: 362 IENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
+E A + +MP + + W A++G A D+ + + + + + I +V L ++
Sbjct: 365 LEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNI 424
Query: 421 LSACSRAGAVE 431
+A + V+
Sbjct: 425 YAAAGKWDCVD 435
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/674 (35%), Positives = 351/674 (52%), Gaps = 33/674 (4%)
Query: 23 LLGRAVHAQIIRSHETPLPSF-LCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIA 81
LL R + ++ P P L +I Y++ + L A ++ +R VV+W S+I+
Sbjct: 46 LLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMIS 105
Query: 82 GCVNNGRFVAALLHFVNM-RRDCVQPNDFTFPCVFKASSS-------LQMPITGKQAHAL 133
GCV G A+ F M R V C F++ QMP+ A
Sbjct: 106 GCVECGDMNTAVKLFDEMPERSVVSWTAMVNGC-FRSGKVDQAERLFYQMPVKDTAAWNS 164
Query: 134 ALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDA 193
+ G Y + G DA +F +MP +N+ +W I Q+ RS +A
Sbjct: 165 MVHG---------------YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEA 209
Query: 194 VGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDF 253
+ FK L + S F + ACA+ H+G Q+H II+ G+ + V+ LI F
Sbjct: 210 LDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITF 269
Query: 254 YGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFL-QARKEAEPTDF 312
Y C I S VF + V W ++L+ N + E A +F R P
Sbjct: 270 YANCKRIGDSRKVFDE--KVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQS 327
Query: 313 MISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM 372
+S L++C+ LG L+ G+ +H +AVK ++ + FVG++LV +Y G++ +A VF ++
Sbjct: 328 TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI 387
Query: 373 PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVES 432
+++IV+WN++I G A G A +F +M P +T +LSACS G +E
Sbjct: 388 FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMI--RLNKEPDEITFTGLLSACSHCGFLEK 445
Query: 433 GMHIFESMKE-IYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGA 491
G +F M I I+ +HY C+VD+L R G + A E I+ M + P +W ALL A
Sbjct: 446 GRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
Query: 492 CRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNV 551
CRMH G+ AA +F LD + S +V+LSN+ ASAGRW + +R +MK GI K
Sbjct: 506 CRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKP 565
Query: 552 GYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKA 611
G SW+ ++ + H F + D H S I L LRE++K+ GY PD +L D+EDE+K
Sbjct: 566 GSSWVVIRGKKHEFFSGDQPH--CSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKE 623
Query: 612 SEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRF 671
+WYHSE++A+AFGLI G + + KNLR+C DCH+ IK IS +VGREI++RD RF
Sbjct: 624 EMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRF 683
Query: 672 HRFKDGWCSCKDYW 685
H FK+G CSC DYW
Sbjct: 684 HHFKNGTCSCGDYW 697
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/632 (35%), Positives = 345/632 (54%), Gaps = 40/632 (6%)
Query: 91 AALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAF 150
A +L + +R + + F+F + KA S + G + H +A K + D FV
Sbjct: 94 ATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFM 153
Query: 151 DMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSI 210
DMY+ G ARN+FDEM R++ TWN I + G +A F+E + P+ +
Sbjct: 154 DMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEM 213
Query: 211 TFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFY--GKCGDI-------- 260
C ++AC + R ++ F+I + R D + L+ Y C D+
Sbjct: 214 ILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
Query: 261 ------VSSEMV--FSRIGR-----------SRRNVVTWCSMLAALVQNHEEERACLVFL 301
VS+ MV +S+ GR ++++V W +M++A V++ + A VF
Sbjct: 274 SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFE 333
Query: 302 Q-ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
+ +P + SV+SACA LG L+ + VH+ ++ + + +AL+++Y KCG
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 361 SIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
++ VF +MP+RN+V+W++MI + G+ AL LF M + + P+ VT V V
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN--VEPNEVTFVGV 451
Query: 421 LSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHP 480
L CS +G VE G IF SM + Y I P EHY C+VDL R+ L+ A E I++MP+
Sbjct: 452 LYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
Query: 481 TISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
+ IWG+L+ ACR+HG+ +LGK AA+++ EL+P+ G V++SN+ A RWE+ +R+
Sbjct: 512 NVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRR 571
Query: 541 EMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNL 600
M++ + K G S I + H F D H++++EI A L ++ ++K AGY PD
Sbjct: 572 VMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGS 631
Query: 601 SLFDLEDEEKASEVWYHSEKIALAFGLIALPH-------GVPIRITKNLRICGDCHSAIK 653
L D+E+EEK V +HSEK+AL FGL+ GV IRI KNLR+C DCH K
Sbjct: 632 VLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV-IRIVKNLRVCEDCHLFFK 690
Query: 654 FISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
+S++ REIIVRD RFH +K+G CSC+DYW
Sbjct: 691 LVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/660 (34%), Positives = 357/660 (54%), Gaps = 9/660 (1%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
G+ VH ++R + L + N LI MY K + SA+ + R +++W ++I+G
Sbjct: 215 GKEVHVHVVR-YGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
NG L F MR V P+ T V A L G+ HA + G D+
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
V S MY G +A +F M ++++ +W IS + A+ ++
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 205 GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSE 264
+P+ IT A L+ACA L G +LH I++ V VAN LI+ Y KC I +
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 265 MVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAEL 324
+F I R+NV++W S++A L N+ A + Q + +P +++ L+ACA +
Sbjct: 454 DIFHNI--PRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARI 511
Query: 325 GGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMI 384
G L G+ +HA ++ V + F+ +AL+D+Y +CG + A F+ ++++ +WN ++
Sbjct: 512 GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILL 570
Query: 385 GGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIY 444
GY+ +G M + LF+ M + P +T +S+L CS++ V G+ F M++ Y
Sbjct: 571 TGYSERGQGSMVVELFDRMVKSR--VRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-Y 627
Query: 445 RIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVA 504
+ P +HYACVVDLL R+G + A++FIQ MP+ P ++WGALL ACR+H K LG+++
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELS 687
Query: 505 AEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHV 564
A+ +FELD + G +++L N+ A G+W E VR+ MK+ G+ + G SW+ VK +VH
Sbjct: 688 AQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHA 747
Query: 565 FQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWY-HSEKIAL 623
F + D H + EI +L E+M + G + S D E E E++ HSE+ A+
Sbjct: 748 FLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMD-ETEISRDEIFCGHSERKAI 806
Query: 624 AFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKD 683
AFGLI G+PI +TKNL +C +CH +KFIS+ V REI VRD FH FKDG CSC D
Sbjct: 807 AFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 230/461 (49%), Gaps = 14/461 (3%)
Query: 44 LCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAAL-LHFVNMRRD 102
L N + M+ + L A +V R + +W L+ G G F A+ L+ +
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 103 CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDA 162
V+P+ +TFPCV + + GK+ H ++ G D+ V + MY K G A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 163 RNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADR 222
R +FD MP+R++ +WNA IS ++G + + F + +P+ +T + ++AC
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 223 LGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
LGR +HA++I +G+ D+SV N L Y G +E +FSR+ R+++V+W +
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM--ERKDIVSWTT 368
Query: 283 MLAALVQNHEEERACLVF-LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
M++ N ++A + + + +P + +++VLSACA LG L+ G +H LA+KA
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
+ + V + L+++Y KC I+ A +F +P++N+++W ++I G AL
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYA--CVVDL 459
+M + + P+ +TL + L+AC+R GA+ G I + R G + + ++D+
Sbjct: 489 QMKM---TLQPNAITLTAALAACARIGALMCGKEIH---AHVLRTGVGLDDFLPNALLDM 542
Query: 460 LARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
R G ++ A+ Q ++ W LL G+ +
Sbjct: 543 YVRCGRMNTAWS--QFNSQKKDVTSWNILLTGYSERGQGSM 581
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 212/424 (50%), Gaps = 20/424 (4%)
Query: 82 GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIY 141
G NG+ A+ +M+ V ++ F + + + G + +++AL
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
V +G + M+ + G VDA +F +M +RNL +WN + + G +A+ + L
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 202 CVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDI 260
V G +P+ TF L C L G+++H ++R GY D+ V N LI Y KCGD+
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 261 VSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLS 319
S+ ++F R+ RR++++W +M++ +N +F R + D M ++SV+S
Sbjct: 248 KSARLLFDRM--PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVT 379
AC LG LGR +HA + +I V ++L +Y GS AE++FS M +++IV+
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 380 WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFES 439
W MI GY + D A+ + M S + P +T+ +VLSAC+ G +++G+
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDS--VKPDEITVAAVLSACATLGDLDTGV----- 418
Query: 440 MKEIYRIEPGAEHYACV------VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACR 493
E++++ A + V +++ ++ +D+A + N+P IS W +++ R
Sbjct: 419 --ELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLR 475
Query: 494 MHGK 497
++ +
Sbjct: 476 LNNR 479
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/617 (37%), Positives = 346/617 (56%), Gaps = 33/617 (5%)
Query: 77 TSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALK 136
+IA CV +G AL F MR N T+ + S + P +AH L +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMR----AKNTITWNSLLIGIS--KDPSRMMEAHQLFDE 118
Query: 137 GGQI----YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLD 192
+ Y++ + C Y + A++ FD MP ++ A+WN I+ + G
Sbjct: 119 IPEPDTFSYNIMLSC-----YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEK 173
Query: 193 AVGAFKEFLCVHGEPNSITFCAFLNA---CADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
A F + E N +++ A ++ C D L + H F + V
Sbjct: 174 ARELFYSMM----EKNEVSWNAMISGYIECGD-----LEKASHFF--KVAPVRGVVAWTA 222
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-E 308
+I Y K + +E +F + ++ N+VTW +M++ V+N E +F +E
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNK-NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P +SS L C+EL L+LGR +H + K+ + ++ ++L+ +Y KCG + +A ++
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F M ++++V WNAMI GYA G+ D AL LF EM I P ++T V+VL AC+ AG
Sbjct: 342 FEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNK--IRPDWITFVAVLLACNHAG 399
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGAL 488
V GM FESM Y++EP +HY C+VDLL R+G ++ A + I++MP P +++G L
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTL 459
Query: 489 LGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIK 548
LGACR+H +L + AAEKL +L+ +++ +V L+N+ AS RWE+ VRK MK+ +
Sbjct: 460 LGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
Query: 549 KNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDE 608
K GYSWI ++N+VH F++ D H + I L +L ++MK AGY P+ +L ++E+E
Sbjct: 520 KVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEE 579
Query: 609 EKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDN 668
+K + +HSEK+A+AFG I LP G I++ KNLRICGDCH AIKFIS I REIIVRD
Sbjct: 580 QKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDT 639
Query: 669 NRFHRFKDGWCSCKDYW 685
RFH FKDG CSC DYW
Sbjct: 640 TRFHHFKDGSCSCGDYW 656
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 2/215 (0%)
Query: 48 LINMYSKLDLLNSAQHVLS-LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQP 106
+I Y K + A+ + +T + +VTW ++I+G V N R L F M + ++P
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 107 NDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMF 166
N S L G+Q H + K DV S MY K G DA +F
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 167 DEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLH 226
+ M ++++ WNA IS Q G + A+ F+E + P+ ITF A L AC ++
Sbjct: 343 EVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVN 402
Query: 227 LGRQLHAFIIRSGYRE-DVSVANGLIDFYGKCGDI 260
+G ++R E ++D G+ G +
Sbjct: 403 IGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL 437
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/525 (38%), Positives = 307/525 (58%), Gaps = 8/525 (1%)
Query: 165 MFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG 224
+F +P + +N+ I + + L V ++ L + P++ TF + + +CAD
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 225 LHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSML 284
L +G+ +H + SG+ D V L+ FY KCGD+ + VF R+ +++V W S++
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRM--PEKSIVAWNSLV 180
Query: 285 AALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVD 343
+ QN + A VF Q R+ EP S+LSACA+ G + LG VH + +D
Sbjct: 181 SGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLD 240
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM 403
N+ +G+AL++LY +CG + A +VF +M + N+ W AMI Y G A+ LF +M
Sbjct: 241 LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
CG P+ VT V+VLSAC+ AG VE G +++ M + YR+ PG EH+ C+VD+L R+
Sbjct: 301 E-DDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRA 359
Query: 464 GLVDRAYEFIQNMPIHPTIS---IWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHV 520
G +D AY+FI + + +W A+LGAC+MH LG A++L L+P++ G+HV
Sbjct: 360 GFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHV 419
Query: 521 VLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQA 580
+LSN+ A +G+ +E + +R M ++K VGYS I V+N+ ++F D SH++ EI
Sbjct: 420 MLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYR 479
Query: 581 MLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITK 640
L L K+ GY P + + +E+EEK + YHSEK+A+AFGL+ V I I K
Sbjct: 480 YLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTV-DVAITIVK 538
Query: 641 NLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
NLRIC DCHSA K+IS + R+I VRD RFH F++G CSC DYW
Sbjct: 539 NLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 158/320 (49%), Gaps = 17/320 (5%)
Query: 95 HFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYS 154
++ M V P+++TF V K+ + L GK H A+ G D +V + YS
Sbjct: 94 YYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYS 153
Query: 155 KTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCA 214
K G AR +FD MP++++ WN+ +S Q+G + +A+ F + EP+S TF +
Sbjct: 154 KCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVS 213
Query: 215 FLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR 274
L+ACA + LG +H +II G +V + LI+ Y +CGD+ + VF ++ +
Sbjct: 214 LLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKET- 272
Query: 275 RNVVTWCSMLAALVQNHEEERACLVFLQARKEAE--PTDFMISSVLSACAELGGLELGRS 332
NV W +M++A + ++A +F + + P + +VLSACA G +E GRS
Sbjct: 273 -NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRS 331
Query: 333 VHALAVKAC-----VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVT----WNAM 383
V+ K+ V+ ++ +VD+ G+ G ++ A + ++ T W AM
Sbjct: 332 VYKRMTKSYRLIPGVEHHV----CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAM 387
Query: 384 IGGYAHQGDVDMALGLFEEM 403
+G + D+ + + + +
Sbjct: 388 LGACKMHRNYDLGVEIAKRL 407
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 158/329 (48%), Gaps = 33/329 (10%)
Query: 229 RQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALV 288
+Q+HA +I +GY S+ LI I + ++F + + +++
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDD------FLFNSVI 79
Query: 289 QNHEEERA---CLVFLQA--RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVD 343
++ + R C+ + + P+++ +SV+ +CA+L L +G+ VH AV +
Sbjct: 80 KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG 139
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM 403
+ +V +ALV Y KCG +E A QVF MP+++IV WN+++ G+ G D A+ +F +M
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHY----ACVVDL 459
G P T VS+LSAC++ GAV G + + Y I G + +++L
Sbjct: 200 R--ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQ-----YIISEGLDLNVKLGTALINL 252
Query: 460 LARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSG-- 517
+R G V +A E M ++ W A++ A HG G+ A E LF +D G
Sbjct: 253 YSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHG---YGQQAVE-LFNKMEDDCGPI 307
Query: 518 -NHVVLSNML---ASAGRWEEATIVRKEM 542
N+V +L A AG EE V K M
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRM 336
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 132/291 (45%), Gaps = 8/291 (2%)
Query: 2 NFHPPNL-LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNS 60
N P N +S+++S + +G+ VH + S L +++ L+ YSK +
Sbjct: 102 NVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVS-GFGLDTYVQAALVTFYSKCGDMEG 160
Query: 61 AQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSS 120
A+ V +++V W SL++G NG A+ F MR +P+ TF + A +
Sbjct: 161 ARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQ 220
Query: 121 LQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAY 180
G H + G +V +G + ++YS+ G AR +FD+M + N+A W A
Sbjct: 221 TGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAM 280
Query: 181 ISNAVQDGRSLDAVGAFKEFLCVHGE-PNSITFCAFLNACADRLGLHLGRQLHAFIIRSG 239
IS G AV F + G PN++TF A L+ACA + GR ++ + +S
Sbjct: 281 ISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS- 339
Query: 240 YREDVSVANG--LIDFYGKCGDIVSSEMVFSRIGRSRRNVVT--WCSMLAA 286
YR V + ++D G+ G + + ++ + + W +ML A
Sbjct: 340 YRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/639 (34%), Positives = 356/639 (55%), Gaps = 11/639 (1%)
Query: 54 KLDLLNSAQHVLSLTHL-RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQPNDFTF 111
++++ S +L T + ++ VT S I V RF A F + C + T+
Sbjct: 67 RIEVKESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTY 126
Query: 112 PCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQ 171
+ +A L+ K+ + + G + ++ M+ K G+ +DAR +FDE+P+
Sbjct: 127 DALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPE 186
Query: 172 RNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQL 231
RNL ++ + IS V G ++A FK + + TF L A A +++G+QL
Sbjct: 187 RNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQL 246
Query: 232 HAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL-VQN 290
H ++ G ++ V+ GLID Y KCGDI + F + + V W +++A +
Sbjct: 247 HVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECM--PEKTTVAWNNVIAGYALHG 304
Query: 291 HEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGS 350
+ EE CL++ F +S ++ +L LEL + HA ++ + I +
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 351 ALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGI 410
ALVD Y K G ++ A VF ++P++NI++WNA++GGYA+ G A+ LFE+M + +
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMI--AANV 422
Query: 411 APSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAY 470
AP++VT ++VLSAC+ +G E G IF SM E++ I+P A HYAC+++LL R GL+D A
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAI 482
Query: 471 EFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAG 530
FI+ P+ T+++W ALL ACRM +LG+V AEKL+ + PE GN+VV+ NM S G
Sbjct: 483 AFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMG 542
Query: 531 RWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAK----LR 586
+ EA V + ++ G+ +W+ V ++ H F + D N ++ + + L
Sbjct: 543 KTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELM 602
Query: 587 EEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICG 646
EE+ + GY + L D++++E+ YHSEK+A+A+GL+ P P++IT+N RIC
Sbjct: 603 EEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICK 662
Query: 647 DCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
+CH ++FIS + GRE++VRD +RFH FK+G CSC YW
Sbjct: 663 NCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 196/442 (44%), Gaps = 26/442 (5%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL 70
+L+E+ + +S + V+ ++ + P ++ N ++ M+ K ++ A+ +
Sbjct: 128 ALVEACIRLKSIRCVKRVYGFMMSNGFEP-EQYMMNRILLMHVKCGMIIDARRLFDEIPE 186
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQA 130
R + ++ S+I+G VN G +V A F M + TF + +AS+ L GKQ
Sbjct: 187 RNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQL 246
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
H ALK G + + FV C DMYSK G DAR F+ MP++ WN I+ G S
Sbjct: 247 HVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYS 306
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGL 250
+A+ + + T + L L +Q HA +IR+G+ ++ L
Sbjct: 307 EEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTAL 366
Query: 251 IDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQA-RKEAEP 309
+DFY K G + ++ VF ++ R+N+++W +++ + A +F + P
Sbjct: 367 VDFYSKWGRVDTARYVFDKL--PRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 310 TDFMISSVLSACAELGGLELG-------RSVHALAVKACVDENIFVGSALVDLYGKCGSI 362
+VLSACA G E G VH + +A + +++L G+ G +
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRA------MHYACMIELLGRDGLL 478
Query: 363 ENAEQVFSEMPQRNIVT-WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAP----SYVTL 417
+ A P + V W A++ Q ++++ + E++ G+ P +YV +
Sbjct: 479 DEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLY----GMGPEKLGNYVVM 534
Query: 418 VSVLSACSRAGAVESGMHIFES 439
++ ++ + + ES
Sbjct: 535 YNMYNSMGKTAEAAGVLETLES 556
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/658 (34%), Positives = 346/658 (52%), Gaps = 72/658 (10%)
Query: 2 NFHPPNLLSSLLESAVSTR-SPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNS 60
+F + + LL+S + ++ S + R VHA +I+S + F+ N LI+ YSK L
Sbjct: 15 SFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSN-EIFIQNRLIDAYSKCGSLED 73
Query: 61 AQHVLS----------------LTHL---------------RTVVTWTSLIAGCVNNGRF 89
+ V LT L R TW S+++G + R
Sbjct: 74 GRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 90 VAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSA 149
AL +F M ++ N+++F V A S L G Q H+L K + DV++G +
Sbjct: 134 EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSAL 193
Query: 150 FDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNS 209
DMYSK G DA+ +FDEM RN+ +WN+ I+ Q+G +++A+ F+ L EP+
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 210 ITFCAFLNACADRLGLHLGRQLHAFIIRSG-YREDVSVANGLIDFYGKCGDIVSSEMVFS 268
+T + ++ACA + +G+++H ++++ R D+ ++N +D Y KC I + +F
Sbjct: 254 VTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 269 RI-----------------------------GRSRRNVVTWCSMLAALVQNHEEERACLV 299
+ + RNVV+W +++A QN E E A +
Sbjct: 314 SMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSL 373
Query: 300 F-LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVK------ACVDENIFVGSAL 352
F L R+ PT + +++L ACA+L L LG H +K + +++IFVG++L
Sbjct: 374 FCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSL 433
Query: 353 VDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAP 412
+D+Y KCG +E VF +M +R+ V+WNAMI G+A G + AL LF EM G P
Sbjct: 434 IDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML--ESGEKP 491
Query: 413 SYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEF 472
++T++ VLSAC AG VE G H F SM + + P +HY C+VDLL R+G ++ A
Sbjct: 492 DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSM 551
Query: 473 IQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRW 532
I+ MP+ P IWG+LL AC++H LGK AEKL E++P +SG +V+LSNM A G+W
Sbjct: 552 IEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKW 611
Query: 533 EEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK 590
E+ VRK M+ G+ K G SWI ++ HVF KD SH + +I ++L L EM+
Sbjct: 612 EDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/598 (35%), Positives = 328/598 (54%), Gaps = 44/598 (7%)
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
T K HA +K G + + + ++Y K G A +FDEMP R+ W + ++
Sbjct: 21 TAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALN 80
Query: 186 Q---DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
Q G++L + + P+ F A + ACA+ + GRQ+H I S Y
Sbjct: 81 QANLSGKTLSVFSSVGSSSGL--RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRI------------------GRSR---------- 274
D V + L+D Y KCG + S++ VF I GR
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 275 -RNVVTWCSMLAALVQNHEEERACLVFLQARKEA----EPTDFMISSVLSACAELGGLEL 329
+N+ +W ++++ VQ+ + A VF + R+E +P ++SS++ ACA L
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDP--LVLSSIVGACANLAASIA 256
Query: 330 GRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAH 389
GR VH L + D +F+ +AL+D+Y KC + A+ +FS M R++V+W ++I G A
Sbjct: 257 GRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQ 316
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
G + AL L+++M S G+ P+ VT V ++ ACS G VE G +F+SM + Y I P
Sbjct: 317 HGQAEKALALYDDMV--SHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Query: 450 AEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLG-KVAAEKL 508
+HY C++DLL RSGL+D A I MP P W ALL AC+ G+ ++G ++A +
Sbjct: 375 LQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434
Query: 509 FELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAK 568
+D +++LSN+ ASA W + + R+++ ++ ++K+ G+S + V+ VF A
Sbjct: 435 SSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAG 494
Query: 569 DSSHEKNSEIQAMLAKLREEMK-KAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGL 627
++SH +I +L KL EEM+ + GY PDT+ L D++++EK +++HSE+ A+A+GL
Sbjct: 495 ETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGL 554
Query: 628 IALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
+ G PIRI KNLR+CGDCH +K IS I REIIVRD R+H FK G CSC D+W
Sbjct: 555 LKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 4/187 (2%)
Query: 216 LNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR 275
L CA L + LHA I++ G + +AN L++ YGKCG + VF + R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEM--PHR 67
Query: 276 NVVTWCSMLAALVQNHEEERACLVFLQARKEA--EPTDFMISSVLSACAELGGLELGRSV 333
+ + W S+L AL Q + + VF + P DF+ S+++ ACA LG ++ GR V
Sbjct: 68 DHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Query: 334 HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDV 393
H + + + V S+LVD+Y KCG + +A+ VF + +N ++W AM+ GYA G
Sbjct: 128 HCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187
Query: 394 DMALGLF 400
+ AL LF
Sbjct: 188 EEALELF 194
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 158/355 (44%), Gaps = 38/355 (10%)
Query: 8 LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSL 67
+ S+L+++ + S GR VH I S E + + L++MY+K LLNSA+ V
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVS-EYANDEVVKSSLVDMYAKCGLLNSAKAVFDS 165
Query: 68 THLRTVVTWTS-------------------------------LIAGCVNNGRFVAALLHF 96
++ ++WT+ LI+G V +G+ + A F
Sbjct: 166 IRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVF 225
Query: 97 VNMRRDCVQPND-FTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSK 155
MRR+ V D + A ++L I G+Q H L + G VF+ + DMY+K
Sbjct: 226 TEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAK 285
Query: 156 TGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAF 215
+ A+++F M R++ +W + I Q G++ A+ + + + +PN +TF
Sbjct: 286 CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGL 345
Query: 216 LNACADRLGLHLGRQLHAFIIRS-GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR 274
+ AC+ + GR+L + + G R + L+D G+ G + +E + +
Sbjct: 346 IYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFP- 404
Query: 275 RNVVTWCSMLAALVQNHEEERACLV---FLQARKEAEPTDFMISSVLSACAELGG 326
+ TW ++L+A + + + + + K +P+ +++ S + A A L G
Sbjct: 405 PDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 459
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 6 PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVL 65
P +LSS++ + + + + GR VH +I F+ N LI+MY+K + +A+ +
Sbjct: 238 PLVLSSIVGACANLAASIAGRQVHGLVIALGFDSC-VFISNALIDMYAKCSDVIAAKDIF 296
Query: 66 SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPI 125
S R VV+WTSLI G +G+ AL + +M V+PN+ TF + A S +
Sbjct: 297 SRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVE 356
Query: 126 TGKQAHALALKGGQIYDVFVGCSA-FDMYSKTGLRVDARNMFDEMP-QRNLATWNAYISN 183
G++ K I + D+ ++GL +A N+ MP + TW A +S
Sbjct: 357 KGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSA 416
Query: 184 AVQDGR 189
+ GR
Sbjct: 417 CKRQGR 422
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
Query: 318 LSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI 377
L CA L +++HA VK + + + + LV++YGKCG+ +A QVF EMP R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 378 VTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG--MH 435
+ W +++ +Q ++ S G+ P +++ AC+ G+++ G +H
Sbjct: 70 IAWASVLTAL-NQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 436 IFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMH 495
+ E E + +VD+ A+ GL++ A ++ + TIS W A++
Sbjct: 129 CHFIVSEYANDEVVK---SSLVDMYAKCGLLNSAKAVFDSIRVKNTIS-WTAMVSGYAKS 184
Query: 496 GKTKLGKVAAEKLFELDP-EDSGNHVVLSNMLASAGRWEEATIVRKEMK 543
G+ K A +LF + P ++ + L + +G+ EA V EM+
Sbjct: 185 GR----KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/534 (38%), Positives = 304/534 (56%), Gaps = 4/534 (0%)
Query: 153 YSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITF 212
Y + G V+AR +FDEMP R L TWNA I+ +Q + + + F+E + P+ T
Sbjct: 35 YVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 94
Query: 213 CAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR 272
+ + A + +G+Q+H + I+ G D+ V + L Y + G + E+V +
Sbjct: 95 GSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM-- 152
Query: 273 SRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGR 331
RN+V W +++ QN E ++ + P +VLS+C++L G+
Sbjct: 153 PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 212
Query: 332 SVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQG 391
+HA A+K + V S+L+ +Y KCG + +A + FSE + V W++MI Y G
Sbjct: 213 QIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHG 272
Query: 392 DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAE 451
D A+ LF M + + V +++L ACS +G + G+ +F+ M E Y +PG +
Sbjct: 273 QGDEAIELFNTMA-EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLK 331
Query: 452 HYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFEL 511
HY CVVDLL R+G +D+A I++MPI I IW LL AC +H ++ + +++ ++
Sbjct: 332 HYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 391
Query: 512 DPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSS 571
DP DS +V+L+N+ ASA RW + + VRK M+D +KK G SW K VH F+ D S
Sbjct: 392 DPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRS 451
Query: 572 HEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALP 631
K+ EI + L +L EMK GY PDT L D+++EEK S++ HSEK+A+AF L+ LP
Sbjct: 452 QSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILP 511
Query: 632 HGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
G PIRI KNLR+C DCH A K+IS I REI +RD +RFH F +G CSC DYW
Sbjct: 512 EGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 187/425 (44%), Gaps = 26/425 (6%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N LIN Y + L +A+ V R + TW ++IAG + L F M
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNM 165
P+++T VF S+ L+ G+Q H +K G D+ V S MY + G D +
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 166 FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
MP RNL WN I Q+G + +K PN ITF L++C+D
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 226 HLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLA 285
G+Q+HA I+ G V+V + LI Y KCG + + FS R + V W SM++
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE--REDEDEVMWSSMIS 266
Query: 286 ALVQNHEEERACLVFLQARKEAEPTDFMISSV-----LSACAELGGLELGRSVHALAV-K 339
A + + + A +F AE T+ I+ V L AC+ G + G + + V K
Sbjct: 267 AYGFHGQGDEAIELF---NTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Query: 340 ACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALG 398
+ + +VDL G+ G ++ AE + MP + +IV W ++ + +MA
Sbjct: 324 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 383
Query: 399 LFEEMTLGSCGIAPSYVTLVSVLSACSRAGAV--------------ESGMHIFESMKEIY 444
+F+E+ + YV L +V ++ R V E+G+ FE E++
Sbjct: 384 VFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVH 443
Query: 445 RIEPG 449
+ + G
Sbjct: 444 QFKMG 448
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM 403
+N + L++ Y + G + NA +VF EMP R + TWNAMI G + L LF EM
Sbjct: 23 KNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM 82
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLA-- 461
G +P TL SV S + +V G I Y I+ G E V LA
Sbjct: 83 H--GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHG-----YTIKYGLELDLVVNSSLAHM 135
Query: 462 --RSGLVDRAYEFIQNMPIHPTISIWGALL 489
R+G + I++MP+ ++ W L+
Sbjct: 136 YMRNGKLQDGEIVIRSMPVRNLVA-WNTLI 164
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/587 (37%), Positives = 325/587 (55%), Gaps = 21/587 (3%)
Query: 114 VFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRN 173
V K S S T H L LK G D F Y K AR +FDEM + N
Sbjct: 36 VHKLSESTNAAFT-NLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPN 94
Query: 174 LATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE----PNSITFCAFLNACADRLGLHLGR 229
+ +W + IS G+ +A+ F++ +H + PN TF + AC+ +G+
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQK---MHEDRPVPPNEYTFASVFKACSALAESRIGK 151
Query: 230 QLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQ 289
+HA + SG R ++ V++ L+D YGKC D+ ++ VF + RNVV+W SM+ A Q
Sbjct: 152 NIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQ 211
Query: 290 N---HEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENI 346
N HE F A FM++SV+SAC+ LG L+ G+ H L + + N
Sbjct: 212 NARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNT 271
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLG 406
V ++L+D+Y KCGS+ AE++F + +++++ +MI A G + A+ LF+EM G
Sbjct: 272 VVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAG 331
Query: 407 SCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLV 466
I P+YVTL+ VL ACS +G V G+ M E Y + P + HY CVVD+L R G V
Sbjct: 332 R--INPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRV 389
Query: 467 DRAYEFIQNMPIHPTIS--IWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSN 524
D AYE + + + +WGALL A R+HG+ ++ A+++L + + + + ++ LSN
Sbjct: 390 DEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSN 449
Query: 525 MLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAK 584
A +G WE++ +R EMK G K SWI K+ V+VF A D S +++ EI+ L
Sbjct: 450 AYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKD 509
Query: 585 LREEMKKAGY------FPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRI 638
L + MK+ G+ ++ D+++E K V H E++ALA+GL+ LP G IRI
Sbjct: 510 LEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRI 569
Query: 639 TKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
NLR+C DCH A K IS IV REI+VRD NRFH FK+G C+C+DYW
Sbjct: 570 MNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 193/424 (45%), Gaps = 19/424 (4%)
Query: 42 SFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
+F NHL+ Y KL +N+A+ + VV+WTS+I+G + G+ AL F M
Sbjct: 64 TFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHE 123
Query: 102 D-CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRV 160
D V PN++TF VFKA S+L GK HA G ++ V S DMY K
Sbjct: 124 DRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVE 183
Query: 161 DARNMFDEM--PQRNLATWNAYISNAVQDGRSLDAVGAFKEF--LCVHGEPNSITFCAFL 216
AR +FD M RN+ +W + I+ Q+ R +A+ F+ F N + +
Sbjct: 184 TARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVI 243
Query: 217 NACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRN 276
+AC+ L G+ H + R GY + VA L+D Y KCG + +E +F RI +
Sbjct: 244 SACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRI--RCHS 301
Query: 277 VVTWCSMLAALVQNHEEERACLVFLQ-ARKEAEPTDFMISSVLSACAELGGLELGRSVHA 335
V+++ SM+ A ++ E A +F + P + VL AC+ G + G +
Sbjct: 302 VISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLS 361
Query: 336 L-AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM---PQRNIVTWNAMIGGYAHQG 391
L A K V + + +VD+ G+ G ++ A ++ + ++ + W A++ G
Sbjct: 362 LMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHG 421
Query: 392 DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAE 451
V++ + + + + +Y+ L S A AV G ES++ + +
Sbjct: 422 RVEIVSEASKRLIQSNQQVTSAYIAL-------SNAYAVSGGWEDSESLRLEMKRSGNVK 474
Query: 452 HYAC 455
AC
Sbjct: 475 ERAC 478
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 7/222 (3%)
Query: 5 PPN--LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQ 62
PPN +S+ ++ + +G+ +HA++ S + + L++MY K + + +A+
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISG-LRRNIVVSSSLVDMYGKCNDVETAR 186
Query: 63 HVLS--LTHLRTVVTWTSLIAGCVNNGRFVAALLHF--VNMRRDCVQPNDFTFPCVFKAS 118
V + + R VV+WTS+I N R A+ F N + N F V A
Sbjct: 187 RVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISAC 246
Query: 119 SSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWN 178
SSL GK AH L +GG + V S DMY+K G A +F + ++ ++
Sbjct: 247 SSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYT 306
Query: 179 AYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
+ I + G AV F E + PN +T L+AC+
Sbjct: 307 SMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/685 (33%), Positives = 370/685 (54%), Gaps = 27/685 (3%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
+++S S G+ +HA +I+ ++CN LI++Y KL A+ V R
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVS-DVYVCNSLISLYMKLGCAWDAEKVFEEMPER 194
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAH 131
+V+W S+I+G + G ++L+ F M + +P+ F+ A S + P GK+ H
Sbjct: 195 DIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIH 254
Query: 132 ALALKGG-QIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
A++ + DV V S DMYSK G A +F+ M QRN+ WN I ++GR
Sbjct: 255 CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRV 314
Query: 191 LDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
DA F++ +G +P+ IT L A A + GR +H + +R G+ + +
Sbjct: 315 TDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETA 370
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-E 308
LID YG+CG + S+E++F R+ + +NV++W S++AA VQN + A +F + +
Sbjct: 371 LIDMYGECGQLKSAEVIFDRM--AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P I+S+L A AE L GR +HA VK+ N + ++LV +Y CG +E+A +
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F+ + +++V+WN++I YA G +++ LF EM + + P+ T S+L+ACS +G
Sbjct: 489 FNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI--ASRVNPNKSTFASLLAACSISG 546
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGAL 488
V+ G FESMK Y I+PG EHY C++DL+ R+G A F++ MP PT IWG+L
Sbjct: 547 MVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSL 606
Query: 489 LGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIK 548
L A R H + + AAE++F+++ +++G +V+L NM A AGRWE+ ++ M+ GI
Sbjct: 607 LNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGIS 666
Query: 549 KNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYF--------PDTNL 600
+ S + K + HVF D SH ++I +L + + + + P+T +
Sbjct: 667 RTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLV 726
Query: 601 SLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVG 660
+ +++ HS ++A FGLI+ G + + N RIC CH ++ SR+
Sbjct: 727 -------KSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTR 779
Query: 661 REIIVRDNNRFHRFKDGWCSCKDYW 685
REI+V D+ FH F +G CSC +YW
Sbjct: 780 REIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 218/424 (51%), Gaps = 13/424 (3%)
Query: 76 WTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALAL 135
W +I G + G ++ A+ + M V+ + FT+P V K+ + + GK+ HA+ +
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 136 KGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVG 195
K G + DV+V S +Y K G DA +F+EMP+R++ +WN+ IS + G ++
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLM 217
Query: 196 AFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE-DVSVANGLIDFY 254
FKE L +P+ + + L AC+ +G+++H +RS DV V ++D Y
Sbjct: 218 LFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277
Query: 255 GKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMI 314
K G++ +E +F+ G +RN+V W M+ +N A L F + ++ +I
Sbjct: 278 SKYGEVSYAERIFN--GMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 335
Query: 315 SSV--LSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM 372
+S+ L A A L GR++H A++ ++ + +AL+D+YG+CG +++AE +F M
Sbjct: 336 TSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Query: 373 PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVES 432
++N+++WN++I Y G AL LF+E L + P T+ S+L A + + ++
Sbjct: 392 AEKNVISWNSIIAAYVQNGKNYSALELFQE--LWDSSLVPDSTTIASILPAYAESLSLSE 449
Query: 433 GMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGAC 492
G I + + R +V + A G ++ A + ++ + +S W +++ A
Sbjct: 450 GREIHAYIVK-SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS-WNSIIMAY 507
Query: 493 RMHG 496
+HG
Sbjct: 508 AVHG 511
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 174/348 (50%), Gaps = 13/348 (3%)
Query: 153 YSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITF 212
++ + L DA +FDEM + + WN I G ++AV + + + ++ T+
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 213 CAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR 272
+ + A L G+++HA +I+ G+ DV V N LI Y K G +E VF +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM-- 191
Query: 273 SRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGR 331
R++V+W SM++ + + + ++F + K +P F S L AC+ + ++G+
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 332 SVHALAVKACVDE-NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQ 390
+H AV++ ++ ++ V ++++D+Y K G + AE++F+ M QRNIV WN MIG YA
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 391 GDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIF-ESMKEIYRIEPG 449
G V A F++M+ + G+ P +T +++L A A+ G I +M+ + P
Sbjct: 312 GRVTDAFLCFQKMSEQN-GLQPDVITSINLLP----ASAILEGRTIHGYAMRRGFL--PH 364
Query: 450 AEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGK 497
++D+ G + A M IS W +++ A +GK
Sbjct: 365 MVLETALIDMYGECGQLKSAEVIFDRMAEKNVIS-WNSIIAAYVQNGK 411
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/611 (34%), Positives = 324/611 (53%), Gaps = 42/611 (6%)
Query: 110 TFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD----ARNM 165
T C+ + S ++ KQ HA LK G + D + + F + + D A+ +
Sbjct: 17 TMSCLQRCSKQEEL----KQIHARMLKTGLMQDSY-AITKFLSFCISSTSSDFLPYAQIV 71
Query: 166 FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
FD + + WN I ++ ++ LC N+ TF + L AC++
Sbjct: 72 FDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 131
Query: 226 HLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR------------- 272
Q+HA I + GY DV N LI+ Y G+ + ++F RI
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191
Query: 273 ----------------SRRNVVTWCSMLAALVQNHEEERACLVFLQARK-EAEPTDFMIS 315
+ +N ++W +M++ VQ + A +F + + + EP + ++
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251
Query: 316 SVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR 375
+ LSACA+LG LE G+ +H+ K + + +G L+D+Y KCG +E A +VF + ++
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
Query: 376 NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMH 435
++ W A+I GYA+ G A+ F EM GI P+ +T +VL+ACS G VE G
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQ--KMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 436 IFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMH 495
IF SM+ Y ++P EHY C+VDLL R+GL+D A FIQ MP+ P IWGALL ACR+H
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Query: 496 GKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSW 555
+LG+ E L +DP G +V +N+ A +W++A R+ MK+ G+ K G S
Sbjct: 430 KNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCST 489
Query: 556 IAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDL-EDEEKASEV 614
I+++ H F A D SH + +IQ+ +R ++++ GY P+ L DL +D+E+ + V
Sbjct: 490 ISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIV 549
Query: 615 WYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRF 674
HSEK+A+ +GLI G IRI KNLR+C DCH K IS+I R+I++RD RFH F
Sbjct: 550 HQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHF 609
Query: 675 KDGWCSCKDYW 685
+DG CSC DYW
Sbjct: 610 RDGKCSCGDYW 620
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 157/363 (43%), Gaps = 36/363 (9%)
Query: 56 DLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVF 115
D L AQ V W +I G + +LL + M N +TFP +
Sbjct: 63 DFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 116 KASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP----- 170
KA S+L Q HA K G DV+ S + Y+ TG A +FD +P
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 171 --------------------------QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
++N +W IS VQ + +A+ F E
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 205 GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSE 264
EP++++ L+ACA L G+ +H+++ ++ R D + LID Y KCG++ +
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 265 MVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAE 323
VF I +++V W ++++ + A F++ +K +P ++VL+AC+
Sbjct: 303 EVFKNI--KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360
Query: 324 LGGLELGRSV-HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR-NIVTWN 381
G +E G+ + +++ + I +VDL G+ G ++ A++ EMP + N V W
Sbjct: 361 TGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWG 420
Query: 382 AMI 384
A++
Sbjct: 421 ALL 423
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N +I Y K ++ A + + ++WT++I+G V AL F M+ V+
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNM 165
P++ + A + L GK H+ K D +GC DMY+K G +A +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 166 FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
F + ++++ W A IS G +A+ F E + +PN ITF A L AC+ GL
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS-YTGL 363
Query: 226 HLGRQLHAFIIRSGYREDVSVANG--LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
+L + + Y ++ + ++D G+ G ++ F + + N V W ++
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAG-LLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 284 LAA 286
L A
Sbjct: 423 LKA 425
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/593 (38%), Positives = 329/593 (55%), Gaps = 52/593 (8%)
Query: 99 MRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGL 158
MR+ V P+ F+F V KA + + TG Q H ALK G +FVG + MY G
Sbjct: 97 MRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGC 156
Query: 159 RVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNA 218
AR +FDEM Q NL WNA I+ R D GA + F
Sbjct: 157 VEFARKVFDEMHQPNLVAWNAVITACF---RGNDVAGAREIF------------------ 195
Query: 219 CADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV 278
D++ ++R+ +V +A Y K G++ S++ +FS + R+ V
Sbjct: 196 --DKM-----------LVRNHTSWNVMLAG-----YIKAGELESAKRIFSEM--PHRDDV 235
Query: 279 TWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALA 337
+W +M+ + N + L F + ++ P + ++ VLSAC++ G E G+ +H
Sbjct: 236 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 295
Query: 338 VKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ-RNIVTWNAMIGGYAHQGDVDMA 396
KA + V +AL+D+Y +CG++ A VF M + R IV+W +MI G A G + A
Sbjct: 296 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
Query: 397 LGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV 456
+ LF EMT + G+ P ++ +S+L ACS AG +E G F MK +Y IEP EHY C+
Sbjct: 356 VRLFNEMT--AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCM 413
Query: 457 VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDS 516
VDL RSG + +AY+FI MPI PT +W LLGAC HG +L + ++L ELDP +S
Sbjct: 414 VDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNS 473
Query: 517 GNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSH---- 572
G+ V+LSN A+AG+W++ +RK M IKK +S + V ++ F A +
Sbjct: 474 GDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDI 533
Query: 573 EKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPH 632
E + +++ ++ +L++E AGY P+ +L+D+E+EEK +V HSEK+ALAF L L
Sbjct: 534 EAHEKLKEIILRLKDE---AGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSK 590
Query: 633 GVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
G IRI KNLRIC DCH+ +K S++ G EI+VRD NRFH FKDG CSC+DYW
Sbjct: 591 GANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 157/401 (39%), Gaps = 79/401 (19%)
Query: 214 AFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSR---I 270
+ LN+C + L Q+H I+ G D LI C +S + ++R +
Sbjct: 10 SLLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLIL---HCAISISDALPYARRLLL 63
Query: 271 GRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE--PTDFMISSVLSACAELGGLE 328
+ + +++ ++ E + VF++ ++ P F + V+ A L
Sbjct: 64 CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 329 LGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNA------ 382
G +H A+K ++ ++FVG+ L+ +YG CG +E A +VF EM Q N+V WNA
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACF 183
Query: 383 -------------------------MIGGYAHQGDVDMALGLFEEM-------------- 403
M+ GY G+++ A +F EM
Sbjct: 184 RGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVG 243
Query: 404 ---------------TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEP 448
L G++P+ V+L VLSACS++G+ E G I E
Sbjct: 244 IAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG-KILHGFVEKAGYSW 302
Query: 449 GAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKL 508
++D+ +R G V A + M I W +++ MHG+ G+ A
Sbjct: 303 IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ---GEEAVRLF 359
Query: 509 FELD----PEDSGNHVVLSNMLASAGRWEEATIVRKEMKDI 545
E+ D + + L + + AG EE EMK +
Sbjct: 360 NEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRV 400
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 2/217 (0%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N ++ Y K L SA+ + S R V+W+++I G +NG F + L+F ++R +
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNM 165
PN+ + V A S GK H K G + V V + DMYS+ G AR +
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 166 FDEMPQ-RNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG 224
F+ M + R + +W + I+ G+ +AV F E P+ I+F + L+AC+
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 225 LHLGRQLHAFIIRSGYRE-DVSVANGLIDFYGKCGDI 260
+ G + + R + E ++ ++D YG+ G +
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/540 (39%), Positives = 301/540 (55%), Gaps = 19/540 (3%)
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQD-GRSLDAVGAFKEFLCVHGE--PNSITFCAFLNA 218
A +FD + + WN I D R +A +++ L GE P+ TF L A
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKML-ERGESSPDKHTFPFVLKA 160
Query: 219 CADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV 278
CA G G+Q+H I++ G+ DV V NGLI YG CG + + VF + R++V
Sbjct: 161 CAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM--PERSLV 218
Query: 279 TWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAV 338
+W SM+ ALV+ E + A +F + ++ EP + + SVLSACA LG L LG HA +
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLL 278
Query: 339 KAC---VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDM 395
+ C V ++ V ++L+++Y KCGS+ AEQVF M +R++ +WNAMI G+A G +
Sbjct: 279 RKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEE 338
Query: 396 ALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYAC 455
A+ F+ M + P+ VT V +L AC+ G V G F+ M Y IEP EHY C
Sbjct: 339 AMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGC 398
Query: 456 VVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKT-KLGKVAAEKLFELDPE 514
+VDL+AR+G + A + + +MP+ P IW +LL AC G + +L + A + +
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKED 458
Query: 515 D-------SGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQA 567
+ SG +V+LS + ASA RW + IVRK M + GI+K G S I + H F A
Sbjct: 459 NESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFA 518
Query: 568 KDSSHEKNSEIQAMLAKLREEMKKAGYFPD-TNLSLFD-LEDEEKASEVWYHSEKIALAF 625
D+SH + +I L + + ++ GY PD + L D D K + HSE++A+AF
Sbjct: 519 GDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAF 578
Query: 626 GLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
GLI LP PIRI KNLR+C DCH K IS++ EIIVRD RFH FKDG CSC DYW
Sbjct: 579 GLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 191/421 (45%), Gaps = 23/421 (5%)
Query: 26 RAVHAQIIRSH--ETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
+ +HA +R+ E P FL ++ + S +N A V + W +LI C
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 84 VNN--GRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIY 141
++ + A +L+ + R P+ TFP V KA + + GKQ H +K G
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
DV+V +Y G AR +FDEMP+R+L +WN+ I V+ G A+ F+E +
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE-M 243
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRS---GYREDVSVANGLIDFYGKCG 258
EP+ T + L+ACA L LG HAF++R DV V N LI+ Y KCG
Sbjct: 244 QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 259 DIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF---LQARKEAEPTDFMIS 315
+ +E VF G +R++ +W +M+ + E A F + R+ P
Sbjct: 304 SLRMAEQVFQ--GMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFV 361
Query: 316 SVLSACAELGGLELGRSVHALAVK-ACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ 374
+L AC G + GR + V+ C++ + +VDL + G I A + MP
Sbjct: 362 GLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPM 421
Query: 375 R-NIVTWNAMIGGYAHQG-DVDMA-------LGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
+ + V W +++ +G V+++ +G E+ + + +YV L V ++ S
Sbjct: 422 KPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASAS 481
Query: 426 R 426
R
Sbjct: 482 R 482
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/503 (38%), Positives = 299/503 (59%), Gaps = 17/503 (3%)
Query: 194 VGAFKEFLCVHGE-------PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
V +F+E LC + E P++ T+ L AC + G+Q+H + + G DV V
Sbjct: 110 VMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFV 169
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFL----Q 302
N LI+ YG+CG++ S VF ++ + +W SM++A L+F +
Sbjct: 170 QNSLINMYGRCGEMELSSAVFEKL--ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSE 227
Query: 303 ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSI 362
+AE + M+S++L ACA G L LG S+H ++ + NI V ++LVD+Y KCG +
Sbjct: 228 TNLKAEESG-MVSALL-ACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCL 285
Query: 363 ENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLS 422
+ A +F +M +RN +T++AMI G A G+ + AL +F +M G+ P +V VSVL+
Sbjct: 286 DKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI--KEGLEPDHVVYVSVLN 343
Query: 423 ACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTI 482
ACS +G V+ G +F M + ++EP AEHY C+VDLL R+GL++ A E IQ++PI
Sbjct: 344 ACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND 403
Query: 483 SIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEM 542
IW L CR+ +LG++AA++L +L + G+++++SN+ + W++ R E+
Sbjct: 404 VIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEI 463
Query: 543 KDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSL 602
G+K+ G+S + +K + H F ++D SH K EI ML ++ ++K GY PD L
Sbjct: 464 AIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQIL 523
Query: 603 FDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGRE 662
++++EEK + HS+K+A+AFGL+ P G I+I +NLR+C DCH+ K IS I RE
Sbjct: 524 LNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYERE 583
Query: 663 IIVRDNNRFHRFKDGWCSCKDYW 685
I+VRD NRFH FK G CSCKDYW
Sbjct: 584 IVVRDRNRFHLFKGGTCSCKDYW 606
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 160/314 (50%), Gaps = 8/314 (2%)
Query: 76 WTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALAL 135
+ ++I G VN F AL + M + +P++FT+PC+ KA + L+ GKQ H
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 136 KGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVG 195
K G DVFV S +MY + G + +F+++ + A+W++ +S G + +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 196 AFKEFLC--VHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDF 253
F+ +C + + + L ACA+ L+LG +H F++R+ ++ V L+D
Sbjct: 220 LFRG-MCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDM 278
Query: 254 YGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDF 312
Y KCG + + +F ++ +RN +T+ +M++ L + E E A +F + KE EP
Sbjct: 279 YVKCGCLDKALHIFQKM--EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHV 336
Query: 313 MISSVLSACAELGGLELGRSVHALAVK-ACVDENIFVGSALVDLYGKCGSIENAEQVFSE 371
+ SVL+AC+ G ++ GR V A +K V+ LVDL G+ G +E A +
Sbjct: 337 VYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQS 396
Query: 372 MP-QRNIVTWNAMI 384
+P ++N V W +
Sbjct: 397 IPIEKNDVIWRTFL 410
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 30/369 (8%)
Query: 2 NFHPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA 61
NF P LL++ +S G+ +H Q+ + F+ N LINMY + + +
Sbjct: 132 NFTYP----CLLKACTRLKSIREGKQIHGQVFKLG-LEADVFVQNSLINMYGRCGEMELS 186
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN---------DFTFP 112
V +T +W+S+++ G + LL F M C + N
Sbjct: 187 SAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGM---CSETNLKAEESGMVSALLA 243
Query: 113 CVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQR 172
C + +L M I H L+ ++ V S DMY K G A ++F +M +R
Sbjct: 244 CANTGALNLGMSI-----HGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLH 232
N T++A IS G A+ F + + EP+ + + + LNAC+ + GR++
Sbjct: 299 NNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 233 AFIIRSGYREDVSVANG-LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAA--LVQ 289
A +++ G E + G L+D G+ G + + I + +V+ W + L+ + Q
Sbjct: 359 AEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVI-WRTFLSQCRVRQ 417
Query: 290 NHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVG 349
N E + L P D+++ S L + ++ ++ R+ +A+K G
Sbjct: 418 NIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWD-DVARTRTEIAIKGLKQTP---G 473
Query: 350 SALVDLYGK 358
++V+L GK
Sbjct: 474 FSIVELKGK 482
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/598 (35%), Positives = 328/598 (54%), Gaps = 44/598 (7%)
Query: 128 KQAHALALKGGQIYDVFVG------CSAFDMYSK-TGLRVDARNMFDEMPQRNLATWNAY 180
K H L+ I DVFV C ++K T L A +F ++ NL +N
Sbjct: 29 KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLL 88
Query: 181 ISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY 240
I A G + + L P++ITF + A ++ + +G Q H+ I+R G+
Sbjct: 89 IRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGF 148
Query: 241 REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLA-----ALVQNHEE-- 293
+ DV V N L+ Y CG I ++ +F ++G R+VV+W SM+A +V+N E
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMG--FRDVVSWTSMVAGYCKCGMVENAREMF 206
Query: 294 ------------------------ERACLVF-LQARKEAEPTDFMISSVLSACAELGGLE 328
E+A +F R+ + ++ SV+S+CA LG LE
Sbjct: 207 DEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALE 266
Query: 329 LGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYA 388
G + VK+ + N+ +G+ALVD++ +CG IE A VF +P+ + ++W+++I G A
Sbjct: 267 FGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLA 326
Query: 389 HQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEP 448
G A+ F +M S G P VT +VLSACS G VE G+ I+E+MK+ + IEP
Sbjct: 327 VHGHAHKAMHYFSQMI--SLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEP 384
Query: 449 GAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKL 508
EHY C+VD+L R+G + A FI M + P I GALLGAC+++ T++ + L
Sbjct: 385 RLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML 444
Query: 509 FELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVF-QA 567
++ PE SG +V+LSN+ A AG+W++ +R MK+ +KK G+S I + +++ F
Sbjct: 445 IKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMG 504
Query: 568 KDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGL 627
D H + +I+ ++ +++ GY +T + FD+++EEK S + HSEK+A+A+G+
Sbjct: 505 DDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGM 564
Query: 628 IALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
+ G IRI KNLR+C DCH+ K IS + GRE+IVRD NRFH F++G CSC+DYW
Sbjct: 565 MKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 214/495 (43%), Gaps = 61/495 (12%)
Query: 1 MNFHPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINM------YSK 54
+ F P L +LL+S S+ S L + +H ++R+H F+ + L+ + ++K
Sbjct: 9 LRFKHPKL--ALLQSC-SSFSDL--KIIHGFLLRTHLIS-DVFVASRLLALCVDDSTFNK 62
Query: 55 -LDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPC 113
+LL A + S + + LI A + M + + P++ TFP
Sbjct: 63 PTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPF 122
Query: 114 VFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYS------------------- 154
+ KASS ++ + G+Q H+ ++ G DV+V S MY+
Sbjct: 123 LIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD 182
Query: 155 ------------KTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLC 202
K G+ +AR MFDEMP RNL TW+ I+ ++ A+ F EF+
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF-EFMK 241
Query: 203 VHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
G N + +++CA L G + + ++++S ++ + L+D + +CGDI
Sbjct: 242 REGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIE 301
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE-PTDFMISSVLSA 320
+ VF G + ++W S++ L + +A F Q P D ++VLSA
Sbjct: 302 KAIHVFE--GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSA 359
Query: 321 CAELGGLELGRSVHA-LAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR-NIV 378
C+ G +E G ++ + ++ + +VD+ G+ G + AE +M + N
Sbjct: 360 CSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP 419
Query: 379 TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPS---YVTLVSVLSACSRAGAVESGMH 435
A++G + ++A E + + P Y L+S + AC AG +
Sbjct: 420 ILGALLGACKIYKNTEVA----ERVGNMLIKVKPEHSGYYVLLSNIYAC--AGQWDKIES 473
Query: 436 IFESMKE-IYRIEPG 449
+ + MKE + + PG
Sbjct: 474 LRDMMKEKLVKKPPG 488
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 144/320 (45%), Gaps = 44/320 (13%)
Query: 214 AFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDF------YGKCGDIVSSEM-V 266
A L +C+ L + +H F++R+ DV VA+ L+ + K +++ +
Sbjct: 17 ALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK-EAEPTDFMISSVLSACAELG 325
FS+I N+ + ++ E +A + Q K P + ++ A +E+
Sbjct: 74 FSQI--QNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEME 131
Query: 326 GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIG 385
+ +G H+ V+ +++V ++LV +Y CG I A ++F +M R++V+W +M+
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 386 GYAHQGDVDMALGLFEEM---------------TLGSC--------------GIAPSYVT 416
GY G V+ A +F+EM +C G+ +
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 417 LVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM 476
+VSV+S+C+ GA+E G +E + + + + +VD+ R G +++A + +
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 477 PIHPTISIWGALLGACRMHG 496
P ++S W +++ +HG
Sbjct: 311 PETDSLS-WSSIIKGLAVHG 329
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/526 (37%), Positives = 303/526 (57%), Gaps = 6/526 (1%)
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
AR++F+ M + ++ +N+ + L+ F E L P++ TF + L ACA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWC 281
L GRQLH ++ G ++V V LI+ Y +C D+ S+ VF RI VV +
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP--CVVCYN 199
Query: 282 SMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKA 340
+M+ + + A +F + + K +P + + SVLS+CA LG L+LG+ +H A K
Sbjct: 200 AMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH 259
Query: 341 CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLF 400
+ + V +AL+D++ KCGS+++A +F +M ++ W+AMI YA+ G + ++ +F
Sbjct: 260 SFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMF 319
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
E M S + P +T + +L+ACS G VE G F M + I P +HY +VDLL
Sbjct: 320 ERMR--SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL 377
Query: 461 ARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHV 520
+R+G ++ AYEFI +PI PT +W LL AC H L + +E++FELD G++V
Sbjct: 378 SRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYV 437
Query: 521 VLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQA 580
+LSN+ A +WE +RK MKD K G S I V N VH F + D +++
Sbjct: 438 ILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHR 497
Query: 581 MLAKLREEMKKAGYFPDTNLSLF-DLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRIT 639
L ++ +E+K +GY PDT++ + ++ D+EK + YHSEK+A+ FGL+ P G IR+
Sbjct: 498 ALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVV 557
Query: 640 KNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
KNLR+C DCH+A K IS I GR++++RD RFH F+DG CSC D+W
Sbjct: 558 KNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 188/389 (48%), Gaps = 5/389 (1%)
Query: 58 LNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA 117
++ A+H+ +V + S+ G + FV + D + P+++TFP + KA
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 118 SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATW 177
+ + G+Q H L++K G +V+V + +MY++ AR +FD + + + +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 178 NAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIR 237
NA I+ + R +A+ F+E + +PN IT + L++CA L LG+ +H + +
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 238 SGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC 297
+ + V V LID + KCG + + +F ++ ++ W +M+ A + + E++
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM--RYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 298 LVFLQARKE-AEPTDFMISSVLSACAELGGLELGRSVHALAV-KACVDENIFVGSALVDL 355
L+F + R E +P + +L+AC+ G +E GR + V K + +I ++VDL
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 356 YGKCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSY 414
+ G++E+A + ++P + W ++ + ++D+A + E + Y
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDY 436
Query: 415 VTLVSVLSACSRAGAVESGMHIFESMKEI 443
V L ++ + + V+S + + K +
Sbjct: 437 VILSNLYARNKKWEYVDSLRKVMKDRKAV 465
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 294/515 (57%), Gaps = 37/515 (7%)
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
P+ TF L + + L L LG++ HA I+ G +D V L++ Y CGD+ S++ V
Sbjct: 60 PDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRV 119
Query: 267 FSRIGRS-----------------------------RRNVVTWCSMLAALVQNHEEERAC 297
F G RNV++W ++ V + + A
Sbjct: 120 FDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEAL 179
Query: 298 LVF--LQARKEAE----PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSA 351
+F +Q K E P +F +S+VLSAC LG LE G+ VHA K V+ +I +G+A
Sbjct: 180 DLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTA 239
Query: 352 LVDLYGKCGSIENAEQVFSEM-PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGI 410
L+D+Y KCGS+E A++VF+ + ++++ ++AMI A G D LF EMT S I
Sbjct: 240 LIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTT-SDNI 298
Query: 411 APSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAY 470
P+ VT V +L AC G + G F+ M E + I P +HY C+VDL RSGL+ A
Sbjct: 299 NPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAE 358
Query: 471 EFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAG 530
FI +MP+ P + IWG+LL RM G K + A ++L ELDP +SG +V+LSN+ A G
Sbjct: 359 SFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTG 418
Query: 531 RWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK 590
RW E +R EM+ GI K G S++ V+ VH F D S +++ I AML ++ + ++
Sbjct: 419 RWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLR 478
Query: 591 KAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHS 650
+AGY DT L DL +++K + YHSEK+A+AF L+ G P+RI KNLRICGDCH
Sbjct: 479 EAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHL 538
Query: 651 AIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
+K IS++ REI+VRD NRFH F+DG CSC+D+W
Sbjct: 539 VMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 194/441 (43%), Gaps = 49/441 (11%)
Query: 57 LLNSAQHVLSLTHLR-TVVTWTSLIAGCVNN---GRFVAALLHFVNMRRDCVQPNDFTFP 112
++ A + + HL+ W +I V+N + + + ++ MR V P+ TFP
Sbjct: 7 IIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFP 66
Query: 113 CVFKA-SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYS----------------- 154
+ + + L +P+ G++ HA L G D FV S +MYS
Sbjct: 67 FLLPSFHNPLHLPL-GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGS 125
Query: 155 --------------KTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEF 200
K GL DAR +FDEMP+RN+ +W+ I+ V G+ +A+ F+E
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185
Query: 201 LCVHG-----EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYG 255
PN T L+AC L G+ +HA+I + D+ + LID Y
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 256 KCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPTDFM 313
KCG + ++ VF+ +G S+++V + +M+ L + +F + P
Sbjct: 246 KCGSLERAKRVFNALG-SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 304
Query: 314 ISSVLSACAELGGLELGRSVHALAVKAC-VDENIFVGSALVDLYGKCGSIENAEQVFSEM 372
+L AC G + G+S + ++ + +I +VDLYG+ G I+ AE + M
Sbjct: 305 FVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
Query: 373 P-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVE 431
P + +++ W +++ G GD+ G + + + +YV L +V + R V+
Sbjct: 365 PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVK 424
Query: 432 SGMHIFESMKEIYRIEPGAEH 452
H E +K I ++ PG +
Sbjct: 425 CIRHEME-VKGINKV-PGCSY 443
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 11/255 (4%)
Query: 40 LPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNM 99
LP++ N ++N Y+K L++ A+ + R V++W+ LI G V G++ AL F M
Sbjct: 128 LPAW--NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185
Query: 100 R-----RDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYS 154
+ V+PN+FT V A L GK HA K D+ +G + DMY+
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 155 KTGLRVDARNMFDEM-PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG-EPNSITF 212
K G A+ +F+ + ++++ ++A I G + + F E PNS+TF
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTF 305
Query: 213 CAFLNACADRLGLHLGRQLHAFIIRS-GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIG 271
L AC R ++ G+ +I G + ++D YG+ G I +E + +
Sbjct: 306 VGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 365
Query: 272 RSRRNVVTWCSMLAA 286
+V+ W S+L+
Sbjct: 366 ME-PDVLIWGSLLSG 379
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/655 (33%), Positives = 342/655 (52%), Gaps = 45/655 (6%)
Query: 6 PN--LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQH 63
PN L S+L S L G +H I++ L + N L+ MY++ ++ A++
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTG-FDLDVNVVNGLLAMYAQCKRISEAEY 181
Query: 64 VL-SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQ 122
+ ++ + VTWTS++ G NG A+ F ++RR+ Q N +TFP V A +S+
Sbjct: 182 LFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVS 241
Query: 123 MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYIS 182
G Q H +K G +++V + DMY+K AR + + M ++ +WN+ I
Sbjct: 242 ACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIV 301
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA-DRLGLHLGRQLHAFIIRSGYR 241
V+ G +A+ F + + T + LN A R + + H I+++GY
Sbjct: 302 GCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYA 361
Query: 242 EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFL 301
V N L+D Y K G + S+ VF G ++V++W +++ N + A +F
Sbjct: 362 TYKLVNNALVDMYAKRGIMDSALKVFE--GMIEKDVISWTALVTGNTHNGSYDEALKLFC 419
Query: 302 QARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
R P + +SVLSA AEL LE G+ VH +K+ ++ V ++LV +Y KCG
Sbjct: 420 NMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCG 479
Query: 361 SIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
S+E+A +F+ M R+++TW +I GYA
Sbjct: 480 SLEDANVIFNSMEIRDLITWTCLIVGYA-------------------------------- 507
Query: 421 LSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHP 480
+ G +E F+SM+ +Y I PG EHYAC++DL RSG + + + M + P
Sbjct: 508 -----KNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEP 562
Query: 481 TISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
++W A+L A R HG + G+ AA+ L EL+P ++ +V LSNM ++AGR +EA VR+
Sbjct: 563 DATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRR 622
Query: 541 EMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNL 600
MK I K G SW+ K +VH F ++D H + EI + + ++ +K+AGYF D +
Sbjct: 623 LMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSF 682
Query: 601 SLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFI 655
+L DL+ E K + YHSEK+A+AFGL+ +P G PIRI KNLR+CGDCHSA+K +
Sbjct: 683 ALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 172/354 (48%), Gaps = 15/354 (4%)
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
D F + YS + DA +F P +N +WNA IS + G ++A F E
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
+PN T + L C + L G Q+H I++G+ DV+V NGL+ Y +C I
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSA 320
+E +F + +N VTW SML QN +A F R+E ++ + SVL+A
Sbjct: 178 EAEYLFETM-EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTA 236
Query: 321 CAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
CA + +G VH VK+ NI+V SAL+D+Y KC +E+A + M ++V+W
Sbjct: 237 CASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSW 296
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLS--ACSRAG-AVESGMH-- 435
N+MI G QG + AL +F M I T+ S+L+ A SR + S H
Sbjct: 297 NSMIVGCVRQGLIGEALSMFGRMHERDMKIDD--FTIPSILNCFALSRTEMKIASSAHCL 354
Query: 436 IFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALL 489
I ++ Y++ A +VD+ A+ G++D A + + M IS W AL+
Sbjct: 355 IVKTGYATYKLVNNA-----LVDMYAKRGIMDSALKVFEGMIEKDVIS-WTALV 402
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/558 (34%), Positives = 304/558 (54%), Gaps = 4/558 (0%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N L++MYSK + A + + VTW +I+G V +G +L F M V
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNM 165
P+ TF + + S + KQ H ++ D+F+ + D Y K A+N+
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 166 FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
F + ++ + A IS + +G +D++ F+ + V PN IT + L L L
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 226 HLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLA 285
LGR+LH FII+ G+ ++ +ID Y KCG + + +F R+ S+R++V+W SM+
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL--SKRDIVSWNSMIT 515
Query: 286 ALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLSACAELGGLELGRSVHALAVKACVDE 344
Q+ A +F Q D + IS+ LSACA L G+++H +K +
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS 575
Query: 345 NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMT 404
+++ S L+D+Y KCG+++ A VF M ++NIV+WN++I + G + +L LF EM
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 405 LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSG 464
S GI P +T + ++S+C G V+ G+ F SM E Y I+P EHYACVVDL R+G
Sbjct: 636 EKS-GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAG 694
Query: 465 LVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSN 524
+ AYE +++MP P +WG LLGACR+H +L +VA+ KL +LDP +SG +V++SN
Sbjct: 695 RLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISN 754
Query: 525 MLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAK 584
A+A WE T VR MK+ ++K GYSWI + R H+F + D +H ++S I ++L
Sbjct: 755 AHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNS 814
Query: 585 LREEMKKAGYFPDTNLSL 602
L E++ GY P L L
Sbjct: 815 LLGELRLEGYIPQPYLPL 832
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 216/458 (47%), Gaps = 7/458 (1%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD 102
F+ + LI Y + ++ + + V W ++ G G + + F MR D
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 103 CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDA 162
+ PN TF CV +S + G Q H L + G ++ + S MYSK G DA
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 163 RNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADR 222
+F M + + TWN IS VQ G +++ F E + P++ITF + L + +
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 223 LGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
L +Q+H +I+R D+ + + LID Y KC + ++ +FS+ +VV + +
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV--DVVVFTA 411
Query: 283 MLAALVQNHEEERACLVFLQARK-EAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
M++ + N + +F K + P + + S+L L L+LGR +H +K
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
D +G A++D+Y KCG + A ++F + +R+IV+WN+MI A + A+ +F
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLA 461
+M G GI V++ + LSAC+ + G I M + + + + ++D+ A
Sbjct: 532 QM--GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYA 588
Query: 462 RSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
+ G + A + M +S W +++ AC HGK K
Sbjct: 589 KCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLK 625
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 226/498 (45%), Gaps = 26/498 (5%)
Query: 6 PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVL 65
P LS LL++ + G+ VHA +I + S+ ++ MY+ + +
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLI-VNSISGDSYTDERILGMYAMCGSFSDCGKMF 93
Query: 66 SLTHLR--TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQ- 122
LR ++ W S+I+ V NG AL + M V P+ TFPC+ KA +L+
Sbjct: 94 YRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN 153
Query: 123 ---MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNA 179
+ +L + + FV S Y + G +FD + Q++ WN
Sbjct: 154 FKGIDFLSDTVSSLGMDCNE----FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNV 209
Query: 180 YISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSG 239
++ + G + F PN++TF L+ CA +L + LG QLH ++ SG
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG 269
Query: 240 YREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLV 299
+ S+ N L+ Y KCG + +F + SR + VTW M++ VQ+ E +
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMM--SRADTVTWNCMISGYVQSGLMEESLTF 327
Query: 300 FLQARKEAE-PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGK 358
F + P SS+L + ++ LE + +H ++ + +IF+ SAL+D Y K
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFK 387
Query: 359 CGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLV 418
C + A+ +FS+ ++V + AMI GY H G +L +F + I+P+ +TLV
Sbjct: 388 CRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV--KVKISPNEITLV 445
Query: 419 SVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHY----ACVVDLLARSGLVDRAYEFIQ 474
S+L A++ G + + I+ G ++ V+D+ A+ G ++ AYE +
Sbjct: 446 SILPVIGILLALKLGRELHG-----FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 475 NMPIHPTISIWGALLGAC 492
+ +S W +++ C
Sbjct: 501 RLSKRDIVS-WNSMITRC 517
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 145/327 (44%), Gaps = 21/327 (6%)
Query: 215 FLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR 274
L AC++ L G+Q+HAF+I + D ++ Y CG +F R+ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 275 RNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLE----L 329
++ W S++++ V+N +A + + P ++ AC L + L
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 330 GRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAH 389
+V +L + D N FV S+L+ Y + G I+ ++F + Q++ V WN M+ GYA
Sbjct: 161 SDTVSSLGM----DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
G +D + F M + I+P+ VT VLS C+ ++ G+ + + + ++
Sbjct: 217 CGALDSVIKGFSVMRMDQ--ISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVVSGVDFE 273
Query: 450 AEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLF 509
++ + ++ G D A + + M T++ W C + G + G + F
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVT-WN-----CMISGYVQSGLMEESLTF 327
Query: 510 ELDPEDSG---NHVVLSNMLASAGRWE 533
+ SG + + S++L S ++E
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSVSKFE 354
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 323/581 (55%), Gaps = 6/581 (1%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL 70
S++++ S+ LG+ +HAQ+I+ E+ N LI MY + + ++ A V +
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIKL-ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM 231
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCV-QPNDFTFPCVFKASSSLQMPITGKQ 129
+ +++W+S+IAG G AL H M V PN++ F KA SSL P G Q
Sbjct: 232 KDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQ 291
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR 189
H L +K + GCS DMY++ G AR +FD++ + + A+WN I+ +G
Sbjct: 292 IHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGY 351
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
+ +AV F + P++I+ + L A + L G Q+H++II+ G+ D++V N
Sbjct: 352 ADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNS 411
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAE 308
L+ Y C D+ +F R+ + V+W ++L A +Q+ + +F L E E
Sbjct: 412 LLTMYTFCSDLYCCFNLFEDF-RNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE 470
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P + ++L C E+ L+LG VH ++K + F+ + L+D+Y KCGS+ A ++
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F M R++V+W+ +I GYA G + AL LF+EM S GI P++VT V VL+ACS G
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK--SAGIEPNHVTFVGVLTACSHVG 588
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGAL 488
VE G+ ++ +M+ + I P EH +CVVDLLAR+G ++ A FI M + P + +W L
Sbjct: 589 LVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTL 648
Query: 489 LGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIK 548
L AC+ G L + AAE + ++DP +S HV+L +M AS+G WE A ++R MK +K
Sbjct: 649 LSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVK 708
Query: 549 KNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEM 589
K G SWI +++++H+F A+D H + +I +L + +M
Sbjct: 709 KIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 244/546 (44%), Gaps = 50/546 (9%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL 70
SL+ + S+RS GR +H I+ S+ + L NH+++MY K L A+ V
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSN-CKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQA 130
R +V++TS+I G NG+ A+ ++ M ++ + P+ F F + KA +S GKQ
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
HA +K + + MY + DA +F +P ++L +W++ I+ Q G
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 191 LDAVGAFKEFLCVH-GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
+A+ KE L PN F + L AC+ L G Q+H I+S +
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCS 310
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE- 308
L D Y +CG + S+ VF +I R + +W ++A L N + A VF Q R
Sbjct: 311 LCDMYARCGFLNSARRVFDQI--ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P + S+L A + L G +H+ +K ++ V ++L+ +Y C + +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 369 FSEMPQR-NIVTWNAMIGG-YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
F + + V+WN ++ H+ V+M L LF+ M + C P ++T+ ++L C
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEM-LRLFKLMLVSEC--EPDHITMGNLLRGCVE 485
Query: 427 AGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWG 486
+++ G + Y ++ G + ++GL+D
Sbjct: 486 ISSLKLGSQV-----HCYSLKTGL-----APEQFIKNGLID------------------- 516
Query: 487 ALLGACRMHGKT-KLGKVAAEKLFE-LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKD 544
M+ K LG+ A ++F+ +D D + L A +G EEA I+ KEMK
Sbjct: 517 -------MYAKCGSLGQ--ARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKS 567
Query: 545 IGIKKN 550
GI+ N
Sbjct: 568 AGIEPN 573
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 206/453 (45%), Gaps = 41/453 (9%)
Query: 98 NMRRDCVQPNDF------------TFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFV 145
N R+ ++ DF T+ + A SS + G++ H L YD +
Sbjct: 45 NFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTIL 104
Query: 146 GCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG 205
MY K G DAR +FD MP+RNL ++ + I+ Q+G+ +A+ + + L
Sbjct: 105 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL 164
Query: 206 EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEM 265
P+ F + + ACA + LG+QLHA +I+ + N LI Y + + +
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 266 VFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA------EPTDFMISSVLS 319
VF G +++++W S++A Q E A L KE P +++ S L
Sbjct: 225 VF--YGIPMKDLISWSSIIAGFSQLGFEFEA----LSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVT 379
AC+ L + G +H L +K+ + N G +L D+Y +CG + +A +VF ++ + + +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 380 WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFES 439
WN +I G A+ G D A+ +F +M S G P ++L S+L A ++ A+ GM I
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMR--SSGFIPDAISLRSLLCAQTKPMALSQGMQIHS- 395
Query: 440 MKEIYRIEPG--AEHYACVVDLLARSGLVDR--AYEFIQNMPIHPTISIWGALLGACRMH 495
Y I+ G A+ C L + D + ++ + W +L AC H
Sbjct: 396 ----YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 496 GKTKLGKVAAEKLFELD--PEDSGNHVVLSNML 526
+ V +LF+L E +H+ + N+L
Sbjct: 452 EQ----PVEMLRLFKLMLVSECEPDHITMGNLL 480
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 239/699 (34%), Positives = 365/699 (52%), Gaps = 39/699 (5%)
Query: 10 SSLLESAVSTRSPLLGRAVHAQIIRSHETPLPS--FLCNHLINMYSKLDLLNSAQHVLSL 67
++L ++ R+ L G +H ++ SH L N LINMY+K + A+ V
Sbjct: 63 AALFQACAEQRNLLDGINLHHHML-SHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITG 127
R VV+WT+LI G V G F +M C PN+FT V +S P G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVL--TSCRYEP--G 176
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKT---GLRVDARNMFDEMPQRNLATWNAYISNA 184
KQ H LALK G ++V + MY + +A +F+ + +NL TWN+ I+
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 185 VQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA------DRLGLHLGR---QLHAFI 235
A+G F +H + LN C+ D + + + QLH+
Sbjct: 237 QCCNLGKKAIGVFMR---MHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLT 293
Query: 236 IRSGYREDVSVANGLIDFYGK-CGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEE 294
++SG VA LI Y + D +F + R ++V W ++ A ++ E
Sbjct: 294 VKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR-DIVAWNGIITAFAV-YDPE 351
Query: 295 RACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALV 353
RA +F Q R+E P + SSVL ACA L S+HA +K + + ++L+
Sbjct: 352 RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLI 411
Query: 354 DLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPS 413
Y KCGS++ +VF +M R++V+WN+M+ Y+ G VD L +F++M I P
Sbjct: 412 HAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM-----DINPD 466
Query: 414 YVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFI 473
T +++LSACS AG VE G+ IF SM E P HYACV+D+L+R+ A E I
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVI 526
Query: 474 QNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFEL-DPEDSGNHVVLSNMLASAGRW 532
+ MP+ P +W ALLG+CR HG T+LGK+AA+KL EL +P +S +++ +SN+ + G +
Sbjct: 527 KQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSF 586
Query: 533 EEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKA 592
EA + KEM+ ++K SW + N+VH F + + L +L +K+
Sbjct: 587 NEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEM 646
Query: 593 GYFPDT-NLSLFDLEDEEKASEVWYHSEKIALAFGLI----ALPHGVP-IRITKNLRICG 646
GY P+ + S ++E++ + +HSEK+ALAF ++ + GV I+I KN RIC
Sbjct: 647 GYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICI 706
Query: 647 DCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
DCH+ +K S+++G+EI++RD+NRFH FKD CSC DYW
Sbjct: 707 DCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/596 (35%), Positives = 314/596 (52%), Gaps = 42/596 (7%)
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD--ARNMFDEMPQRNLATWNAYISNAV 185
KQ H L+ G ++ +K G+ +D AR + + + RN W A I
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 186 QDGRSLDAVGAFKEFLCVHGE---PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
+G+ +A+ + C+ E P S TF A L AC L+LGRQ HA R
Sbjct: 126 IEGKFDEAIAMYG---CMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFC 182
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVF------------------SRIGR-----------S 273
V V N +ID Y KC I + VF +R+G
Sbjct: 183 FVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLP 242
Query: 274 RRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRS 332
+++V W +M+ QN + + A F + K D ++ +SACA+LG +
Sbjct: 243 TKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADR 302
Query: 333 VHALAVKA--CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQ 390
+A K+ +++ +GSAL+D+Y KCG++E A VF M +N+ T+++MI G A
Sbjct: 303 AVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATH 362
Query: 391 GDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGA 450
G AL LF M + I P+ VT V L ACS +G V+ G +F+SM + + ++P
Sbjct: 363 GRAQEALHLFHYM-VTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421
Query: 451 EHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE 510
+HY C+VDLL R+G + A E I+ M + P +WGALLGACR+H ++ ++AAE LFE
Sbjct: 422 DHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFE 481
Query: 511 LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKN-RVHVFQAKD 569
L+P+ GN+++LSN+ ASAG W VRK +K+ G+KK SW+ KN ++H F +
Sbjct: 482 LEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGN 541
Query: 570 SSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIA 629
+H +++IQ L +L E + GY PD + +D+ D K + H+EK+ALAF L+
Sbjct: 542 LNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLT 601
Query: 630 LPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
I I KNLR+C DCH ++ S + G+ II+RDN RFH F+ G CSC D+W
Sbjct: 602 TNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 186/450 (41%), Gaps = 54/450 (12%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNS--AQHVLSLTHLRTVVTWTSLIAGC 83
+ +H ++R ++ LI +KL + A+ V+ R WT++I G
Sbjct: 66 KQIHGHVLRKG-LDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
G+F A+ + MR++ + P FTF + KA +++ G+Q HA + V
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQR------------------------------- 172
+VG + DMY K AR +FDEMP+R
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLH 232
++ W A ++ Q+ + +A+ F + +T +++ACA +
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 233 AFIIRSGY--REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQN 290
+SGY + V + + LID Y KCG++ + VF + + +NV T+ SM+ L +
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF--MSMNNKNVFTYSSMILGLATH 362
Query: 291 HEEERACLVF--LQARKEAEPTDFMISSVLSACAELGGLELGRSV-----HALAVKACVD 343
+ A +F + + E +P L AC+ G ++ GR V V+ D
Sbjct: 363 GRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRD 422
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEM---PQRNIVTWNAMIGGYAHQGDVDMALGLF 400
+ +VDL G+ G ++ A ++ M P + W A++G + ++A
Sbjct: 423 HY----TCMVDLLGRTGRLQEALELIKTMSVEPHGGV--WGALLGACRIHNNPEIAEIAA 476
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAV 430
E + I +Y+ L +V ++ G V
Sbjct: 477 EHLFELEPDIIGNYILLSNVYASAGDWGGV 506
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 156/355 (43%), Gaps = 22/355 (6%)
Query: 188 GRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVA 247
GR+ + G F E + + ++ D + L+ +Q+H ++R G + +
Sbjct: 29 GRTSNNSGTFSEI----SNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYIL 84
Query: 248 NGLIDFYGKCGDIVSSEMVFSRIGR--SRRNVVTWCSMLAALVQNHEEERACLVFLQARK 305
LI K G V + R+ RN W +++ + + A ++ RK
Sbjct: 85 TKLIRTLTKLG--VPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRK 142
Query: 306 EA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
E P F S++L AC + L LGR HA + ++VG+ ++D+Y KC SI+
Sbjct: 143 EEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDC 202
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
A +VF EMP+R++++W +I YA G+++ A LFE + V ++++
Sbjct: 203 ARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLP------TKDMVAWTAMVTGF 256
Query: 425 SRAGAVESGMHIFESMKE--IYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTI 482
++ + + F+ M++ I E Y L S DRA + Q P+
Sbjct: 257 AQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSD 316
Query: 483 SIWGALLGACRMHGKTKLGKV--AAEKLFELDPEDSGNHVVLSNMLASAGRWEEA 535
+ ++G+ + +K G V A ++ ++ + + LA+ GR +EA
Sbjct: 317 HV---VIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEA 368
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 13/244 (5%)
Query: 311 DFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN--AEQV 368
+ ++SS++S + L + +H ++ +D++ ++ + L+ K G + A +V
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRV 105
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
+ RN W A+I GYA +G D A+ ++ M I P T ++L AC
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEE--ITPVSFTFSALLKACGTMK 163
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYA--CVVDLLARSGLVDRAYEFIQNMPIHPTISIWG 486
+ G + +R+ Y ++D+ + +D A + MP IS W
Sbjct: 164 DLNLGRQFH---AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVIS-WT 219
Query: 487 ALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIG 546
L+ A + + + AAE L +D + A + +EA M+ G
Sbjct: 220 ELIAA---YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG 276
Query: 547 IKKN 550
I+ +
Sbjct: 277 IRAD 280
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 193/512 (37%), Positives = 278/512 (54%), Gaps = 36/512 (7%)
Query: 206 EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFY----------- 254
+P++ T + AC G Q+H IR G+ D V GLI Y
Sbjct: 105 KPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHK 164
Query: 255 --------------------GKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEE 294
+CGD+V + +F G R+ + W +M++ Q E
Sbjct: 165 VFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE--GMPERDPIAWNAMISGYAQVGESR 222
Query: 295 RACLVF-LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALV 353
A VF L + + + SVLSAC +LG L+ GR H+ + + + + + LV
Sbjct: 223 EALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLV 282
Query: 354 DLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPS 413
DLY KCG +E A +VF M ++N+ TW++ + G A G + L LF M G+ P+
Sbjct: 283 DLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQD--GVTPN 340
Query: 414 YVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFI 473
VT VSVL CS G V+ G F+SM+ + IEP EHY C+VDL AR+G ++ A I
Sbjct: 341 AVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSII 400
Query: 474 QNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWE 533
Q MP+ P ++W +LL A RM+ +LG +A++K+ EL+ + G +V+LSN+ A + W+
Sbjct: 401 QQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWD 460
Query: 534 EATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAG 593
+ VR+ MK G++K G S + V VH F D SH K ++I A+ + ++ AG
Sbjct: 461 NVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAG 520
Query: 594 YFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIK 653
Y DT +FD+++EEK + HSEK A+AFG+++L VPIRI KNLR+CGDCH
Sbjct: 521 YKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSM 580
Query: 654 FISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
IS+I REIIVRD NRFH FKDG CSC +W
Sbjct: 581 MISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 169/381 (44%), Gaps = 40/381 (10%)
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLR---- 159
++P+++T + +A + L+M TG Q H + ++ G D V +Y++ G
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 160 ---------------------------VDARNMFDEMPQRNLATWNAYISNAVQDGRSLD 192
V AR +F+ MP+R+ WNA IS Q G S +
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 193 AVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLID 252
A+ F + N + + L+AC L GR H++I R+ + V +A L+D
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 253 FYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTD 311
Y KCGD+ + VF G +NV TW S L L N E+ +F L + P
Sbjct: 284 LYAKCGDMEKAMEVF--WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNA 341
Query: 312 FMISSVLSACAELGGLELG-RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFS 370
SVL C+ +G ++ G R ++ + ++ + LVDLY + G +E+A +
Sbjct: 342 VTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQ 401
Query: 371 EMPQR-NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGA 429
+MP + + W++++ ++++ + ++M +YV L ++ + +
Sbjct: 402 QMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDN 461
Query: 430 VESGMHIFESMK-EIYRIEPG 449
V H+ +SMK + R +PG
Sbjct: 462 VS---HVRQSMKSKGVRKQPG 479
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 35/245 (14%)
Query: 300 FLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
L + + +P ++ ++ ++ AC L E G VH + ++ D + V + L+ LY +
Sbjct: 97 ILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAEL 156
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM---------------- 403
G +++ +VF+ +P + V AM+ A GDV A LFE M
Sbjct: 157 GCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYA 216
Query: 404 TLGSC-------------GIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGA 450
+G G+ + V ++SVLSAC++ GA++ G S E +I+
Sbjct: 217 QVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITV 275
Query: 451 EHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE 510
+VDL A+ G +++A E M + W + L M+G G+ E LF
Sbjct: 276 RLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSALNGLAMNG---FGEKCLE-LFS 330
Query: 511 LDPED 515
L +D
Sbjct: 331 LMKQD 335
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 105/251 (41%), Gaps = 5/251 (1%)
Query: 39 PLPSFLC-NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFV 97
P P F+C ++ ++ + A+ + R + W ++I+G G AL F
Sbjct: 170 PCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFH 229
Query: 98 NMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTG 157
M+ + V+ N V A + L G+ AH+ + V + + D+Y+K G
Sbjct: 230 LMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCG 289
Query: 158 LRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLN 217
A +F M ++N+ TW++ ++ +G + F PN++TF + L
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 218 ACADRLGLHLGRQLHAFIIRS--GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR 275
C+ +G Q H +R+ G + L+D Y + G + + + ++ +
Sbjct: 350 GCS-VVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM-KP 407
Query: 276 NVVTWCSMLAA 286
+ W S+L A
Sbjct: 408 HAAVWSSLLHA 418
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 354 bits (909), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 206/607 (33%), Positives = 327/607 (53%), Gaps = 56/607 (9%)
Query: 127 GKQAHALALKGG--QIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP--QRNLATWNAYIS 182
GK+ HA+ G + ++ + F Y+ +G V A+ +FDE+P +++ W +S
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
+ + G ++++ F E E + ++ CA L +Q H ++ G
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
V V N L+D YGKCG + + +F + ++VV+W +L +V+ ER VF +
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEEL--EEKSVVSWTVVLDTVVKWEGLERGREVFHE 202
Query: 303 -ARKEAEPTDFMIS--------------------------------SVLSACAELGGLEL 329
+ A M++ S+LSACA+ G L +
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVV 262
Query: 330 GRSVHALAVKA-------CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNA 382
GR VH A+K +++ VG+ALVD+Y KCG+I+++ VF M +RN+VTWNA
Sbjct: 263 GRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNA 322
Query: 383 MIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKE 442
+ G A G M + +F +M + P +T +VLSACS +G V+ G F S++
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIRE---VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR- 378
Query: 443 IYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGK 502
Y +EP +HYAC+VDLL R+GL++ A ++ MP+ P + G+LLG+C +HGK ++ +
Sbjct: 379 FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAE 438
Query: 503 VAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRV 562
+L ++ P ++ +++SNM + GR + A +R ++ GI+K G S I V + V
Sbjct: 439 RIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSV 498
Query: 563 HVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPD----TNLSLFDLEDEEKASEVWYHS 618
H F + D SH + EI L ++ E ++ AGY PD + S DLE++E+A + HS
Sbjct: 499 HRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQA--LCCHS 556
Query: 619 EKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGW 678
EK+A+ FGL+ P+ + KNLRIC DCHSA+K +S++ REII+RD NRFH+FK G
Sbjct: 557 EKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGS 616
Query: 679 CSCKDYW 685
CSC DYW
Sbjct: 617 CSCSDYW 623
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 202/430 (46%), Gaps = 49/430 (11%)
Query: 25 GRAVHAQIIRSHETPLP-SFLCNHLINMYSKLDLLNSAQHVLSLTHL--RTVVTWTSLIA 81
G+ +HA + S P S+L N L Y+ + +AQ + L + V WT+L++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 82 GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIY 141
G V ++ FV MRR V+ +D + C+F + L+ +Q H +A+K G +
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 142 DVFVGCSAFDMYSKTGLRVD-------------------------------ARNMFDEMP 170
V V + DMY K GL + R +F EMP
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 171 QRNLATWNAYISNAVQDGRSLDAVGAFKE--FLCVHGEPNSITFCAFLNACADRLGLHLG 228
+RN W ++ + G + + + E F C HG N +T C+ L+ACA L +G
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHG-LNFVTLCSMLSACAQSGNLVVG 263
Query: 229 RQLHAFIIRS-------GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWC 281
R +H + ++ +DV V L+D Y KCG+I SS VF R+ R +RNVVTW
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF-RLMR-KRNVVTWN 321
Query: 282 SMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELG-RSVHALAVKA 340
++ + L + + +F Q +E +P D ++VLSAC+ G ++ G R H+L
Sbjct: 322 ALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYG 381
Query: 341 CVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGL 399
++ + + +VDL G+ G IE AE + EMP N V +++G + G V++A +
Sbjct: 382 -LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERI 440
Query: 400 FEEMTLGSCG 409
E+ S G
Sbjct: 441 KRELIQMSPG 450
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 164/350 (46%), Gaps = 43/350 (12%)
Query: 215 FLNACADRLGLHLGRQLHAFIIRSGYREDVS--VANGLIDFYGKCGDIVSSEMVFSRIGR 272
L CA R L G++LHA + SG ++ ++N L FY G++V+++ +F I
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 273 SRRNVVTWCSMLAALVQNHEEERACLVFLQA-RKEAEPTDFMISSVLSACAELGGLELGR 331
S ++ V W ++L++ + + +F++ RK E D + + CA+L L +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 332 SVHALAVKACVDENIFVGSALVDLYGKCG------------------------------- 360
H +AVK V ++ V +AL+D+YGKCG
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 361 SIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
+E +VF EMP+RN V W M+ GY G L L EM CG ++VTL S+
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVF-RCGHGLNFVTLCSM 250
Query: 421 LSACSRAGAVESG--MHIFESMKEIYRIEPGAEHYACV----VDLLARSGLVDRAYEFIQ 474
LSAC+++G + G +H++ KE+ E + V VD+ A+ G +D + +
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 475 NMPIHPTISIWGALLGACRMHGKTKLG-KVAAEKLFELDPEDSGNHVVLS 523
M ++ W AL MHGK ++ + + + E+ P+D VLS
Sbjct: 311 LMRKRNVVT-WNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLS 359
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 9 LSSLLESAVSTRSPLLGRAVHA-----QIIRSHETPLPSFLC-NHLINMYSKLDLLNSAQ 62
L S+L + + + ++GR VH +++ E + L++MY+K ++S+
Sbjct: 247 LCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSM 306
Query: 63 HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQ 122
+V L R VVTW +L +G +G+ + F M R+ V+P+D TF V A S
Sbjct: 307 NVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSG 365
Query: 123 MPITGKQA-HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP 170
+ G + H+L G + C D+ + GL +A + EMP
Sbjct: 366 IVDEGWRCFHSLRFYGLEPKVDHYAC-MVDLLGRAGLIEEAEILMREMP 413
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 349 bits (896), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 190/490 (38%), Positives = 275/490 (56%), Gaps = 22/490 (4%)
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
P S +F L C L G Q+H I G+ D + L+D Y C + + V
Sbjct: 113 PLSSSFA--LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKV 170
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE----PTDFMISSVLSACA 322
F I +R+ V+W + + ++N ++F + + + + P L ACA
Sbjct: 171 FDEI--PKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACA 228
Query: 323 ELGGLELGRSVHALAVKACVDENIFVGS-----ALVDLYGKCGSIENAEQVFSEMPQRNI 377
LG L+ G+ VH +DEN G+ LV +Y +CGS++ A QVF M +RN+
Sbjct: 229 NLGALDFGKQVHDF-----IDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNV 283
Query: 378 VTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIF 437
V+W A+I G A G A+ F EM GI+P TL +LSACS +G V GM F
Sbjct: 284 VSWTALISGLAMNGFGKEAIEAFNEML--KFGISPEEQTLTGLLSACSHSGLVAEGMMFF 341
Query: 438 ESMKE-IYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
+ M+ ++I+P HY CVVDLL R+ L+D+AY I++M + P +IW LLGACR+HG
Sbjct: 342 DRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
Query: 497 KTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWI 556
+LG+ L EL E++G++V+L N ++ G+WE+ T +R MK+ I G S I
Sbjct: 402 DVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAI 461
Query: 557 AVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLE-DEEKASEVW 615
++ VH F D SH + EI MLA++ +++K AGY + L +LE +EEK +
Sbjct: 462 ELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALR 521
Query: 616 YHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFK 675
YHSEK+A+AFG++ P G IR+TKNLR C DCH+ KF+S + R +IVRD +RFH FK
Sbjct: 522 YHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFK 581
Query: 676 DGWCSCKDYW 685
G CSC D+W
Sbjct: 582 GGSCSCNDFW 591
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 195/457 (42%), Gaps = 47/457 (10%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRS----HETPLPSFLCNHLINMYSKLDLLNSAQHVLS- 66
LL VS+ L R +HA ++R+ + FL +++ + +N + V S
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRD--INYSCRVFSQ 71
Query: 67 -----LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQP-----NDFTFPCVFK 116
L+H T++ SL R F ++RR+ P + F C K
Sbjct: 72 RLNPTLSHCNTMIRAFSLSQTPCEGFRL------FRSLRRNSSLPANPLSSSFALKCCIK 125
Query: 117 ASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLAT 176
+ L G Q H G + D + + D+YS DA +FDE+P+R+ +
Sbjct: 126 SGDLLG----GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVS 181
Query: 177 WNAYISNAVQDGRSLDAVGAFKEFL-----CVHGEPNSITFCAFLNACADRLGLHLGRQL 231
WN S +++ R+ D + F + CV +P+ +T L ACA+ L G+Q+
Sbjct: 182 WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCV--KPDGVTCLLALQACANLGALDFGKQV 239
Query: 232 HAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNH 291
H FI +G ++++N L+ Y +CG + + VF G RNVV+W ++++ L N
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVF--YGMRERNVVSWTALISGLAMNG 297
Query: 292 EEERACLVFLQARKEA-EPTDFMISSVLSACAELG----GLELGRSVHALAVKACVDENI 346
+ A F + K P + ++ +LSAC+ G G+ + + K + N+
Sbjct: 298 FGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFK--IKPNL 355
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
+VDL G+ ++ A + M + + W ++G GDV++ + +
Sbjct: 356 HHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIE 415
Query: 406 GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKE 442
A YV L L+ S G E + MKE
Sbjct: 416 LKAEEAGDYVLL---LNTYSTVGKWEKVTELRSLMKE 449
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 151/382 (39%), Gaps = 44/382 (11%)
Query: 5 PPNLLSS--LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQ 62
P N LSS L+ + + L G +H +I S S L L+++YS + A
Sbjct: 110 PANPLSSSFALKCCIKSGDLLGGLQIHGKIF-SDGFLSDSLLMTTLMDLYSTCENSTDAC 168
Query: 63 HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD---CVQPNDFTFPCVFKASS 119
V R V+W L + + N R L+ F M+ D CV+P+ T +A +
Sbjct: 169 KVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACA 228
Query: 120 SLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNA 179
+L GKQ H + G + + + MYS+ G A +F M +RN+ +W A
Sbjct: 229 NLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTA 288
Query: 180 YISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSG 239
IS +G +A+ AF E L P T L+AC+ H G +
Sbjct: 289 LISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACS-----HSGLVAEGMMFFDR 343
Query: 240 YREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLV 299
R + YG D+ +GR+R + S++ ++
Sbjct: 344 MRSGEFKIKPNLHHYGCVVDL---------LGRARLLDKAY-SLIKSM------------ 381
Query: 300 FLQARKEAEPTDFMISSVLSACAELGGLELGRSV--HALAVKACVDENIFVGSALVDLYG 357
E +P + ++L AC G +ELG V H + +KA E L++ Y
Sbjct: 382 ------EMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKA---EEAGDYVLLLNTYS 432
Query: 358 KCGSIENAEQVFSEMPQRNIVT 379
G E ++ S M ++ I T
Sbjct: 433 TVGKWEKVTELRSLMKEKRIHT 454
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/629 (31%), Positives = 316/629 (50%), Gaps = 43/629 (6%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
L++ R PL +HA+I+ P +FL + LI+ Y++ D A HV +R
Sbjct: 28 LIQHFTRHRLPLHVLQLHARIVVFSIKP-DNFLASKLISFYTRQDRFRQALHVFDEITVR 86
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVN------MRRDCVQPNDFTFPCVFKASS---SLQ 122
++ +L+ + + A F++ D +P+ + CV KA S
Sbjct: 87 NAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFW 146
Query: 123 MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYIS 182
+ +Q H ++GG DVFVG Y+K AR +FDEM +R++ +WN+ IS
Sbjct: 147 LGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMIS 206
Query: 183 NAVQDGRSLDAVGAFKEFL-CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYR 241
Q G D +K L C +PN +T + AC L G ++H +I + +
Sbjct: 207 GYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQ 266
Query: 242 EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR-------------------------- 275
D+S+ N +I FY KCG + + +F +
Sbjct: 267 MDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 276 ---NVVTWCSMLAALVQNHEEERACLVFLQA-RKEAEPTDFMISSVLSACAELGGLELGR 331
+ TW +M++ L+QN+ E F + R + P +SS+L + L+ G+
Sbjct: 327 ESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 332 SVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQG 391
+HA A++ D NI+V ++++D Y K G + A++VF R+++ W A+I YA G
Sbjct: 387 EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHG 446
Query: 392 DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAE 451
D D A LF++M G P VTL +VLSA + +G + HIF+SM Y IEPG E
Sbjct: 447 DSDSACSLFDQMQ--CLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVE 504
Query: 452 HYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFEL 511
HYAC+V +L+R+G + A EFI MPI P +WGALL + G ++ + A ++LFE+
Sbjct: 505 HYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEM 564
Query: 512 DPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSS 571
+PE++GN+ +++N+ AGRWEEA +VR +MK IG+KK G SWI + + F AKDSS
Sbjct: 565 EPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSS 624
Query: 572 HEKNSEIQAMLAKLREEMKKAGYFPDTNL 600
E++ E+ ++ L E M Y L
Sbjct: 625 CERSKEMYEIIEGLVESMSDKEYIRKQEL 653
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 204/616 (33%), Positives = 322/616 (52%), Gaps = 18/616 (2%)
Query: 6 PN--LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSF----LCNHLINMYSKLDLLN 59
PN L+ + ++ S +S +GR HA +++ + SF + L+ MY K L+
Sbjct: 116 PNAYTLAGIFKAESSLQSSTVGRQAHALVVK-----MSSFGDIYVDTSLVGMYCKAGLVE 170
Query: 60 SAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ--PNDFTFPCVFKA 117
V + R TW+++++G GR A+ F R+ + +D+ F V +
Sbjct: 171 DGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSS 230
Query: 118 SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATW 177
++ G+Q H + +K G + V + + MYSK +A MFD RN TW
Sbjct: 231 LAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 178 NAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIR 237
+A ++ Q+G SL+AV F +P+ T LNAC+D L G+QLH+F+++
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 238 SGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC 297
G+ + L+D Y K G + + F + R+V W S+++ VQN + E A
Sbjct: 351 LGFERHLFATTALVDMYAKAGCLADARKGFDCL--QERDVALWTSLISGYVQNSDNEEAL 408
Query: 298 LVFLQARKEAE-PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLY 356
+++ + + P D ++SVL AC+ L LELG+ VH +K + +GSAL +Y
Sbjct: 409 ILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMY 468
Query: 357 GKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVT 416
KCGS+E+ VF P +++V+WNAMI G +H G D AL LFEEM + G+ P VT
Sbjct: 469 SKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML--AEGMEPDDVT 526
Query: 417 LVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM 476
V+++SACS G VE G F M + ++P +HYAC+VDLL+R+G + A EFI++
Sbjct: 527 FVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESA 586
Query: 477 PIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEAT 536
I + +W LL AC+ HGK +LG A EKL L +S +V LS + + GR +
Sbjct: 587 NIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVE 646
Query: 537 IVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFP 596
V K M+ G+ K VG SWI +KN+ HVF D+ H E + ++ + +M + G+
Sbjct: 647 RVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVT 706
Query: 597 DTNLSLFDLEDEEKAS 612
+ S + E+ + S
Sbjct: 707 VLDSSFVEEEEGTQLS 722
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 169/577 (29%), Positives = 275/577 (47%), Gaps = 49/577 (8%)
Query: 1 MNFHPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNS 60
+N H LL L + R+ + GRAVH QIIR+ + N L+N Y+K L
Sbjct: 10 LNPHTSTLLKKLTHHS-QQRNLVAGRAVHGQIIRTGASTCIQH-ANVLVNFYAKCGKLAK 67
Query: 61 AQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAA---LLHFVNMRRDCVQPNDFTFPCVFKA 117
A + + + VV+W SLI G NG ++ + F MR + PN +T +FKA
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 118 SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATW 177
SSLQ G+QAHAL +K D++V S MY K GL D +F MP+RN TW
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 178 NAYISNAVQDGRSLDAVGAFKEFL--CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFI 235
+ +S GR +A+ F FL G + F A L++ A + + LGRQ+H
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 236 IRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEER 295
I++G V+++N L+ Y KC + + +F G RN +TW +M+ QN E
Sbjct: 248 IKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSG--DRNSITWSAMVTGYSQNGESLE 305
Query: 296 ACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVD 354
A +F + +P+++ I VL+AC+++ LE G+ +H+ +K + ++F +ALVD
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVD 365
Query: 355 LYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSY 414
+Y K G + +A + F + +R++ W ++I GY D + AL L+ M + GI P+
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK--TAGIIPND 423
Query: 415 VTLVSVLSACSRAGAVESGMHI----------------------------FESMKEIYRI 446
T+ SVL ACS +E G + E ++R
Sbjct: 424 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRR 483
Query: 447 EPGAE--HYACVVDLLARSGLVDRAYEFIQNM---PIHPTISIWGALLGACRMHGKTKLG 501
P + + ++ L+ +G D A E + M + P + ++ AC G + G
Sbjct: 484 TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Query: 502 KVAAEKLFE---LDPEDSGNHVVLSNMLASAGRWEEA 535
+ + LDP+ ++ + ++L+ AG+ +EA
Sbjct: 544 WFYFNMMSDQIGLDPK-VDHYACMVDLLSRAGQLKEA 579
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 38/296 (12%)
Query: 304 RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
+ E P + L+ ++ L GR+VH ++ I + LV+ Y KCG +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 364 NAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMA---LGLFEEMTLGSCGIAPSYVTLVSV 420
A +F+ + +++V+WN++I GY+ G + + + LF EM + I P+ TL +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMR--AQDILPNAYTLAGI 124
Query: 421 LSACSRAGAVESGMHIFESMKEIYRIEPGAEHY--ACVVDLLARSGLVDRAYEFIQNMPI 478
A S +++S ++ + ++ + Y +V + ++GLV+ + MP
Sbjct: 125 FKAES---SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE 181
Query: 479 HPTISIWGALLGACRMHGKTKLGKVAAEKLFEL----DPEDSGNHVVLSNMLASAGRWEE 534
T + W ++ G+ + A K+F L E S + V + +L+S
Sbjct: 182 RNTYT-WSTMVSGYATRGRVE----EAIKVFNLFLREKEEGSDSDYVFTAVLSSLA---- 232
Query: 535 ATI---VRKEMKDIGIKKNVGYSWIAVKNRVHVFQAK-----------DSSHEKNS 576
ATI + +++ I IK + ++A+ N + +K DSS ++NS
Sbjct: 233 ATIYVGLGRQIHCITIKNGL-LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNS 287
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 342 bits (876), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 329/653 (50%), Gaps = 56/653 (8%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHL----RTVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
N +++ Y+KL ++ A +L + +VTW SL++G + G A+ M+
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD 161
++P+ + + +A + GK H L+ YDV+V + DMY KTG
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
AR +FD M +N+ WN+ +S +++ L
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVS--------------------------GLSYACLL----- 307
Query: 222 RLGLHLGRQLHAFIIR---SGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR--- 275
+ A +IR G + D N L Y G E IG+ +
Sbjct: 308 -------KDAEALMIRMEKEGIKPDAITWNSLASGYATLG---KPEKALDVIGKMKEKGV 357
Query: 276 --NVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRS 332
NVV+W ++ + +N A VF++ ++E P +S++L L L G+
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Query: 333 VHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGD 392
VH ++ + + +V +ALVD+YGK G +++A ++F + +++ +WN M+ GYA G
Sbjct: 418 VHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR 477
Query: 393 VDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEH 452
+ + F M G+ P +T SVLS C +G V+ G F+ M+ Y I P EH
Sbjct: 478 GEEGIAAFSVML--EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEH 535
Query: 453 YACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELD 512
+C+VDLL RSG +D A++FIQ M + P +IWGA L +C++H +L ++A ++L L+
Sbjct: 536 CSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLE 595
Query: 513 PEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSH 572
P +S N++++ N+ ++ RWE+ +R M++ ++ +SWI + VH+F A+ +H
Sbjct: 596 PHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTH 655
Query: 573 EKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPH 632
+I L KL EMKK+GY PDT+ D+ D EK + H+EK+A+ +GLI
Sbjct: 656 PDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKG 715
Query: 633 GVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
PIR+ KN IC D H+ K++S + REI++++ R H F+DG CSC D W
Sbjct: 716 LAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 160/369 (43%), Gaps = 72/369 (19%)
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
A +FDEMP+R+ WN + ++ G AV F+E + T L C++
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVF-------------- 267
+ G GRQ+H +++R G +VS+ N LI Y + G + S VF
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 268 ----SRIGRS---------------RRNVVTWCSMLAALVQNHEEERACLVFLQARKEA- 307
+++G + ++VTW S+L+ + A V + +
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL 221
Query: 308 EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQ 367
+P+ ISS+L A AE G L+LG+++H ++ + +++V + L+D+Y K G + A
Sbjct: 222 KPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARM 281
Query: 368 VFSEMPQRNIV-----------------------------------TWNAMIGGYAHQGD 392
VF M +NIV TWN++ GYA G
Sbjct: 282 VFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK 341
Query: 393 VDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEH 452
+ AL + +M G+AP+ V+ ++ S CS+ G + + +F M+E + P A
Sbjct: 342 PEKALDVIGKMK--EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE-EGVGPNAAT 398
Query: 453 YACVVDLLA 461
+ ++ +L
Sbjct: 399 MSTLLKILG 407
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 183/428 (42%), Gaps = 41/428 (9%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
+SSLL++ LG+A+H I+R ++ ++ LI+MY K L A+ V +
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILR-NQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM 286
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
+ +V W SL++G A + M ++ ++P+ T+ + ++L GK
Sbjct: 287 DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL-----GK 341
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
AL + G M ++ N+ +W A S ++G
Sbjct: 342 PEKALDVIG--------------------------KMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
+A+ F + PN+ T L LH G+++H F +R D VA
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT 435
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLA--ALVQNHEEERACL-VFLQARK 305
L+D YGK GD+ S+ +F G +++ +W ML A+ EE A V L+A
Sbjct: 436 ALVDMYGKSGDLQSAIEIF--WGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGM 493
Query: 306 EAEPTDFMISSVLSACAELGGLELG-RSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
E + F +SVLS C G ++ G + + + + I S +VDL G+ G ++
Sbjct: 494 EPDAITF--TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDE 551
Query: 365 AEQVFSEMPQRNIVT-WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
A M + T W A + D+++A ++ + + + +Y+ ++++ S
Sbjct: 552 AWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSN 611
Query: 424 CSRAGAVE 431
+R VE
Sbjct: 612 LNRWEDVE 619
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 124/240 (51%), Gaps = 7/240 (2%)
Query: 227 LGRQLHAFIIRSGY-REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLA 285
LG +H +I+ G D V + + FYG+C + + +F + +R+ + W ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEM--PKRDDLAWNEIVM 62
Query: 286 ALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDE 344
+++ E+A +F + + A+ D + +L C+ G GR +H ++ ++
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 345 NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMT 404
N+ + ++L+ +Y + G +E + +VF+ M RN+ +WN+++ Y G VD A+GL +EM
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 405 LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSG 464
+ CG+ P VT S+LS + G + + + + M +I ++P + ++ +A G
Sbjct: 183 I--CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPG 239
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 204/585 (34%), Positives = 308/585 (52%), Gaps = 8/585 (1%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
+SLL + ++ +G H+ II+ + F+ N L++MY+K L A+ +
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
R VTW ++I V + A F M + + KA + + GK
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
Q H L++K G D+ G S DMYSK G+ DAR +F +P+ ++ + NA I+ Q+
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYR-EDVSVA 247
+AV F+E L P+ ITF + AC L LG Q H I + G+ E +
Sbjct: 610 LE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 248 NGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA 307
L+ Y + + +FS + S +++V W M++ QN E A + + R +
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELS-SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG 727
Query: 308 E-PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
P +VL C+ L L GR++H+L D + + L+D+Y KCG ++ +
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 367 QVFSEMPQR-NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
QVF EM +R N+V+WN++I GYA G + AL +F+ M I P +T + VL+ACS
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR--QSHIMPDEITFLGVLTACS 845
Query: 426 RAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIW 485
AG V G IFE M Y IE +H AC+VDLL R G + A +FI+ + P +W
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLW 905
Query: 486 GALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDI 545
+LLGACR+HG G+++AEKL EL+P++S +V+LSN+ AS G WE+A +RK M+D
Sbjct: 906 SSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDR 965
Query: 546 GIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK 590
G+KK GYSWI V+ R H+F A D SH + +I+ L L + MK
Sbjct: 966 GVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 202/387 (52%), Gaps = 6/387 (1%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
+IN Y +L L A+ + VV W +I+G G A+ +F NMR+ V+
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 108 DFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFD 167
T V A + G HA A+K G +++VG S MYSK A +F+
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 168 EMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHL 227
+ ++N WNA I +G S + F + + TF + L+ CA L +
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 228 GRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL 287
G Q H+ II+ +++ V N L+D Y KCG + + +F R+ R+ VTW +++ +
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM--CDRDNVTWNTIIGSY 504
Query: 288 VQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENI 346
VQ+ E A +F + +D ++S L AC + GL G+ VH L+VK +D ++
Sbjct: 505 VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDL 564
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLG 406
GS+L+D+Y KCG I++A +VFS +P+ ++V+ NA+I GY+ Q +++ A+ LF+EM
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEML-- 621
Query: 407 SCGIAPSYVTLVSVLSACSRAGAVESG 433
+ G+ PS +T +++ AC + ++ G
Sbjct: 622 TRGVNPSEITFATIVEACHKPESLTLG 648
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 227/484 (46%), Gaps = 26/484 (5%)
Query: 24 LGRAVHAQIIRSHETPLPS--FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIA 81
LG VHA+ I+ L S ++ + L++MYSK + + +A V + V W ++I
Sbjct: 345 LGLVVHAEAIK---LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 82 GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFK---ASSSLQMPITGKQAHALALKGG 138
G +NG + F++M+ +DFTF + AS L+M G Q H++ +K
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM---GSQFHSIIIKKK 458
Query: 139 QIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFK 198
++FVG + DMY+K G DAR +F+ M R+ TWN I + VQD +A FK
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 199 EFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCG 258
+ + L AC GL+ G+Q+H ++ G D+ + LID Y KCG
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 259 DIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVL 318
I + VFS + +VV+ +++A QN+ EE L + P++ ++++
Sbjct: 579 IIKDARKVFSSL--PEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIV 636
Query: 319 SACAELGGLELGRSVHA-LAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ-RN 376
AC + L LG H + + E ++G +L+ +Y + A +FSE+ ++
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 377 IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG--M 434
IV W M+ G++ G + AL ++EM G+ P T V+VL CS ++ G +
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHD--GVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 435 H--IFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGAC 492
H IF ++ + ++D+ A+ G + + + M + W +L+
Sbjct: 755 HSLIFHLAHDLDELTSNT-----LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809
Query: 493 RMHG 496
+G
Sbjct: 810 AKNG 813
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 211/470 (44%), Gaps = 46/470 (9%)
Query: 24 LGRAVHAQ-IIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAG 82
+G+AVH++ +I ++ L N ++++Y+K ++ A+ + V W S+++
Sbjct: 78 IGKAVHSKSLILGIDSE--GRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 83 CVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYD 142
+ G+ L FV++ + + PN FTF V + G+Q H +K G +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 143 VFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLC 202
+ G + DMY+K DAR +F+ + N W S V+ G +AV F+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 203 VHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVS 262
P+ + F +N Y + G +
Sbjct: 255 EGHRPDHLAFVTVINT-----------------------------------YIRLGKLKD 279
Query: 263 SEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSAC 321
+ ++F + S +VV W M++ + E A F RK + + T + SVLSA
Sbjct: 280 ARLLFGEM--SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 322 AELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWN 381
+ L+LG VHA A+K + NI+VGS+LV +Y KC +E A +VF + ++N V WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 382 AMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMK 441
AMI GYAH G+ + LF M + S G T S+LS C+ + +E G F S+
Sbjct: 398 AMIRGYAHNGESHKVMELF--MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSII 454
Query: 442 EIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGA 491
++ +VD+ A+ G ++ A + + M ++ W ++G+
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT-WNTIIGS 503
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 129/293 (44%), Gaps = 14/293 (4%)
Query: 223 LGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
L L +G+ +H+ + G + + N ++D Y KC + +E F + ++V W S
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL---EKDVTAWNS 130
Query: 283 MLAALVQNHEEERACLVFLQA-RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
ML+ + + F+ + P F S VLS CA +E GR +H +K
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
++ N + G ALVD+Y KC I +A +VF + N V W + GY G + A+ +FE
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLA 461
M G P ++ V+V++ R G ++ +F M P + ++
Sbjct: 251 RMR--DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHG 303
Query: 462 RSGLVDRAYEFIQNM---PIHPTISIWGALLGACRMHGKTKLGKVAAEKLFEL 511
+ G A E+ NM + T S G++L A + LG V + +L
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL 356
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/682 (31%), Positives = 347/682 (50%), Gaps = 21/682 (3%)
Query: 5 PPNLLSSL-LESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQH 63
PPN + + L A S G+ +H+ II PL L L++ YS+ + A
Sbjct: 222 PPNEFTFVKLLGASSFLGLEFGKTIHSNII-VRGIPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQM 123
VL+ + + V WTS+++G V N R A+ F+ MR +QPN+FT+ + S+++
Sbjct: 281 VLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRS 340
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAFDMYSK-TGLRVDARNMFDEMPQRNLATWNAYIS 182
GKQ H+ +K G VG + DMY K + V+A +F M N+ +W I
Sbjct: 341 LDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLIL 400
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
V G D G E + EPN +T L AC+ + ++HA+++R
Sbjct: 401 GLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDG 460
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
++ V N L+D Y + + V + RR+ +T+ S++ + + E A V
Sbjct: 461 EMVVGNSLVDAYASSRKVDYAWNVIRSM--KRRDNITYTSLVTRFNELGKHEMALSVINY 518
Query: 303 ARKEAEPTDFM-ISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
+ D + + +SA A LG LE G+ +H +VK+ V ++LVD+Y KCGS
Sbjct: 519 MYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGS 578
Query: 362 IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
+E+A++VF E+ ++V+WN ++ G A G + AL FEEM + P VT + +L
Sbjct: 579 LEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKET--EPDSVTFLILL 636
Query: 422 SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPT 481
SACS + G+ F+ MK+IY IEP EHY +V +L R+G ++ A ++ M + P
Sbjct: 637 SACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPN 696
Query: 482 ISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKE 541
I+ LL ACR G LG+ A K L P D +++L+++ +G+ E A R
Sbjct: 697 AMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNL 756
Query: 542 MKDIGIKKNVGYSWIAVKNRVHVFQAKDSSH-EKNSEIQAMLAKLREEMKKAGYFPDTNL 600
M + + K +G S + V+ +VH F ++D + +K + I A + ++EE+K+ G N
Sbjct: 757 MTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGN- 815
Query: 601 SLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVG 660
E AS +HS K A+ +G I P+ + KN +C DCH + ++R+V
Sbjct: 816 --------ENAS---FHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVD 864
Query: 661 REIIVRDNNRFHRFKDGWCSCK 682
++I VRD N+ H FK+G CSCK
Sbjct: 865 KKITVRDGNQVHIFKNGECSCK 886
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 216/444 (48%), Gaps = 12/444 (2%)
Query: 44 LCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC 103
LCN+L+++Y K D + +A+ + RTV WT +I+ + F +AL F M
Sbjct: 60 LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG 119
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDAR 163
PN+FTF V ++ + L+ G + H +K G + VG S D+YSK G +A
Sbjct: 120 THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC 179
Query: 164 NMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRL 223
+F + + +W IS+ V + +A+ + E + PN TF L A + L
Sbjct: 180 ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFL 238
Query: 224 GLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
GL G+ +H+ II G +V + L+DFY + + + V + G ++V W S+
Sbjct: 239 GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG--EQDVFLWTSV 296
Query: 284 LAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACV 342
++ V+N + A FL+ R +P +F S++LS C+ + L+ G+ +H+ +K
Sbjct: 297 VSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGF 356
Query: 343 DENIFVGSALVDLYGKCGSIE-NAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
+++ VG+ALVD+Y KC + E A +VF M N+V+W +I G G V GL
Sbjct: 357 EDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLM 416
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYA--CVVDL 459
EM + P+ VTL VL ACS+ V + E + R E +VD
Sbjct: 417 EMVKRE--VEPNVVTLSGVLRACSKLRHVR---RVLEIHAYLLRRHVDGEMVVGNSLVDA 471
Query: 460 LARSGLVDRAYEFIQNMPIHPTIS 483
A S VD A+ I++M I+
Sbjct: 472 YASSRKVDYAWNVIRSMKRRDNIT 495
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 156/580 (26%), Positives = 268/580 (46%), Gaps = 50/580 (8%)
Query: 4 HPPNL-LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQ 62
HP SS++ S R G VH +I++ S + + L ++YSK A
Sbjct: 121 HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEG-NSVVGSSLSDLYSKCGQFKEAC 179
Query: 63 HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQ 122
+ S ++WT +I+ V ++ AL + M + V PN+FTF + ASS L
Sbjct: 180 ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG 239
Query: 123 MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYIS 182
+ GK H+ + G +V + S D YS+ DA + + ++++ W + +S
Sbjct: 240 LEF-GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVS 298
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
V++ R+ +AVG F E + +PN+ T+ A L+ C+ L G+Q+H+ I+ G+ +
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRI--GRSRRNVVTWCSMLAALVQNHEEERAC--L 298
V N L+D Y KC +SE+ SR+ NVV+W +++ LV +H + C L
Sbjct: 359 STDVGNALVDMYMKCS---ASEVEASRVFGAMVSPNVVSWTTLILGLV-DHGFVQDCFGL 414
Query: 299 VFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGK 358
+ ++E EP +S VL AC++L + +HA ++ VD + VG++LVD Y
Sbjct: 415 LMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYAS 474
Query: 359 CGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLV 418
++ A V M +R+ +T+ +++ + G +MAL + M GI ++L
Sbjct: 475 SRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMY--GDGIRMDQLSLP 532
Query: 419 SVLSACSRAGAVESGMHI----------------------------FESMKEIYR--IEP 448
+SA + GA+E+G H+ E K+++ P
Sbjct: 533 GFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP 592
Query: 449 GAEHYACVVDLLARSGLVDRAYEFIQNMPI---HPTISIWGALLGACRMHGKTKLGK--- 502
+ +V LA +G + A + M + P + LL AC T LG
Sbjct: 593 DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF 652
Query: 503 VAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEM 542
+K++ ++P+ ++V L +L AGR EEAT V + M
Sbjct: 653 QVMKKIYNIEPQVE-HYVHLVGILGRAGRLEEATGVVETM 691
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 183/400 (45%), Gaps = 16/400 (4%)
Query: 98 NMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTG 157
N+++ C++ F C +S G H +K G + ++ + + +Y KT
Sbjct: 22 NLQKSCIRILSF---CESNSSR------IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD 72
Query: 158 LRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLN 217
+AR +FDEM R + W IS + A+ F+E + PN TF + +
Sbjct: 73 GIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVR 132
Query: 218 ACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNV 277
+CA + G ++H +I++G+ + V + L D Y KCG + +FS + + +
Sbjct: 133 SCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNA--DT 190
Query: 278 VTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHAL 336
++W M+++LV + A + + K P +F +L A + L GLE G+++H+
Sbjct: 191 ISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSN 249
Query: 337 AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMA 396
+ + N+ + ++LVD Y + +E+A +V + ++++ W +++ G+ A
Sbjct: 250 IIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 397 LGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV 456
+G F EM S G+ P+ T ++LS CS +++ G I ++ E + +
Sbjct: 310 VGTFLEMR--SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNAL 366
Query: 457 VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
VD+ + + + + P + W L+ HG
Sbjct: 367 VDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHG 406
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 338 bits (868), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 202/595 (33%), Positives = 318/595 (53%), Gaps = 13/595 (2%)
Query: 2 NFHPPNLLSSLLESAVSTRSPLL--GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLN 59
N P + S + SA S P L G+ +HA I+R + + + L N LI+ Y K +
Sbjct: 244 NVVPDGYILSTVLSACSIL-PFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVI 301
Query: 60 SAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASS 119
+A + + + +++WT+L++G N A+ F +M + ++P+ + + + +
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 120 SLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNA 179
SL G Q HA +K D +V S DMY+K DAR +FD ++ +NA
Sbjct: 362 SLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNA 421
Query: 180 YISNAVQDGRSLD---AVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFII 236
I + G + A+ F++ P+ +TF + L A A L L +Q+H +
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERA 296
+ G D+ + LID Y C + S +VF + +++V W SM A VQ E E A
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM--KVKDLVIWNSMFAGYVQQSENEEA 539
Query: 297 CLVFLQARKEAE-PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDL 355
+FL+ + E P +F +++++A L ++LG+ H +K ++ N ++ +AL+D+
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 356 YGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYV 415
Y KCGS E+A + F R++V WN++I YA+ G+ AL + E+M S GI P+Y+
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM--SEGIEPNYI 657
Query: 416 TLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQN 475
T V VLSACS AG VE G+ FE M + IEP EHY C+V LL R+G +++A E I+
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 476 MPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEA 535
MP P +W +LL C G +L + AAE DP+DSG+ +LSN+ AS G W EA
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEA 776
Query: 536 TIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK 590
VR+ MK G+ K G SWI + VH+F +KD SH K ++I +L L +++
Sbjct: 777 KKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 230/453 (50%), Gaps = 34/453 (7%)
Query: 28 VHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNG 87
VH QII L ++L N LIN+YS+ + A+ V R +V+W+++++ C ++G
Sbjct: 66 VHGQII-VWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 88 RFVAAL---LHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK------QAHALALKGG 138
+ +L L F R+D PN++ +A S L G+ Q + +K G
Sbjct: 125 IYEESLVVFLEFWRTRKD--SPNEYILSSFIQACSGLD----GRGRWMVFQLQSFLVKSG 178
Query: 139 QIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFK 198
DV+VG D Y K G AR +FD +P+++ TW IS V+ GRS ++ F
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238
Query: 199 EFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCG 258
+ + + P+ L+AC+ L G+Q+HA I+R G D S+ N LID Y KCG
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 259 DIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSV 317
++++ +F+ G +N+++W ++L+ QN + A +F K +P + SS+
Sbjct: 299 RVIAAHKLFN--GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSI 356
Query: 318 LSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI 377
L++CA L L G VHA +KA + + +V ++L+D+Y KC + +A +VF ++
Sbjct: 357 LTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416
Query: 378 VTWNAMIGGYAHQG---DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGM 434
V +NAMI GY+ G ++ AL +F +M I PS +T VS+L A + ++
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL--IRPSLLTFVSLLRASASLTSLGLSK 474
Query: 435 HIFESMKEIYRIEPGAEHYACVVDLLARSGLVD 467
I M + Y +D+ A S L+D
Sbjct: 475 QIHGLMFK----------YGLNLDIFAGSALID 497
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 241/534 (45%), Gaps = 44/534 (8%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
LI+ Y K ++ A+ V ++ VTWT++I+GCV GR +L F + D V P+
Sbjct: 189 LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPD 248
Query: 108 DFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFD 167
+ V A S L GKQ HA L+ G D + D Y K G + A +F+
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 168 EMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHL 227
MP +N+ +W +S Q+ +A+ F +P+ + L +CA L
Sbjct: 309 GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGF 368
Query: 228 GRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSML--- 284
G Q+HA+ I++ D V N LID Y KC + + VF + +VV + +M+
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA--DVVLFNAMIEGY 426
Query: 285 AALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVD 343
+ L E A +F R + P+ S+L A A L L L + +H L K ++
Sbjct: 427 SRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLN 486
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM 403
+IF GSAL+D+Y C ++++ VF EM +++V WN+M GY Q + + AL LF E+
Sbjct: 487 LDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL 546
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGM---------------HIFESMKEIYRI-- 446
L P T ++++A +V+ G +I ++ ++Y
Sbjct: 547 QLSR--ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604
Query: 447 EPGAEHYA-------------CVVDLLARSGLVDRAYEFIQNM---PIHPTISIWGALLG 490
P H A V+ A G +A + ++ M I P + +L
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 491 ACRMHGKTKLGKVAAEKL--FELDPEDSGNHVVLSNMLASAGRWEEATIVRKEM 542
AC G + G E + F ++PE + ++V + ++L AGR +A + ++M
Sbjct: 665 ACSHAGLVEDGLKQFELMLRFGIEPE-TEHYVCMVSLLGRAGRLNKARELIEKM 717
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/553 (33%), Positives = 314/553 (56%), Gaps = 8/553 (1%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVN-MRR 101
F+ + I+MY++L + S++ V R + W ++I V N V ++ F+ +
Sbjct: 252 FVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGS 311
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD 161
+ ++ T+ A S+LQ G+Q H K + + + S MYS+ G
Sbjct: 312 KEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHK 371
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
+ +F M +R++ +WN IS VQ+G + + E + + IT A L+A ++
Sbjct: 372 SFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASN 431
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWC 281
+G+Q HAF+IR G + + + + LID Y K G I S+ +F G + R+ TW
Sbjct: 432 LRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWN 490
Query: 282 SMLAALVQNHEEERACLVFLQA-RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKA 340
SM++ QN E+ LVF + + P ++S+L AC+++G ++LG+ +H +++
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ 550
Query: 341 CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLF 400
+D+N+FV SALVD+Y K G+I+ AE +FS+ +RN VT+ MI GY G + A+ LF
Sbjct: 551 YLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLF 610
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
+++ GI P +T V+VLSACS +G ++ G+ IFE M+E+Y I+P +EHY C+ D+L
Sbjct: 611 --LSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDML 668
Query: 461 ARSGLVDRAYEFIQNMPIHPTIS-IWGALLGACRMHGKTKLGKVAAEKLFELDPED--SG 517
R G V+ AYEF++ + I+ +WG+LLG+C++HG+ +L + +E+L + D SG
Sbjct: 669 GRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSG 728
Query: 518 NHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSE 577
V+LSNM A +W+ VR+ M++ G+KK VG S I + V+ F ++D H +SE
Sbjct: 729 YEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSE 788
Query: 578 IQAMLAKLREEMK 590
I ++ L ++M+
Sbjct: 789 IYDVIDGLAKDMR 801
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 165/601 (27%), Positives = 285/601 (47%), Gaps = 72/601 (11%)
Query: 10 SSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNS--------A 61
SS L++ T++ G+AVH +IR + + N L+NMY + LN+
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNS-SRVVHNSLMNMY--VSCLNAPDCFEYDVV 167
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSL 121
+ V + VV W +LI+ V GR A F M R V+P+ +F VF A S
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 122 QMPITGKQAHALALKGGQIY--DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNA 179
+ + L LK G Y D+FV SA MY++ G +R +FD +RN+ WN
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 180 YISNAVQDGRSLDAVGAFKEFL-CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRS 238
I VQ+ ++++ F E + + +T+ +A + + LGRQ H F+ ++
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 239 GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACL 298
+ + N L+ Y +CG + S VF + R+VV+W +M++A VQN ++ +
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVF--LSMRERDVVSWNTMISAFVQNGLDDEGLM 405
Query: 299 VFLQARKEAEPTDFM-ISSVLSACAELGGLELGRSVHALAVKACVDENIFVG--SALVDL 355
+ + +K+ D++ ++++LSA + L E+G+ HA ++ + F G S L+D+
Sbjct: 406 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ---FEGMNSYLIDM 462
Query: 356 YGKCGSIENAEQVF--SEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPS 413
Y K G I ++++F S +R+ TWN+MI GY G + +F +M I P+
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML--EQNIRPN 520
Query: 414 YVTLVSVLSACSRAGAVESG--MHIF-------------ESMKEIYRIEPGAEHYACVVD 458
VT+ S+L ACS+ G+V+ G +H F ++ ++Y + GA YA D
Sbjct: 521 AVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYS-KAGAIKYA--ED 577
Query: 459 LLARS------------------GLVDRAYEFIQNMP---IHPTISIWGALLGACRMHGK 497
+ +++ G+ +RA +M I P + A+L AC G
Sbjct: 578 MFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGL 637
Query: 498 TKLG-KVAAE--KLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
G K+ E +++ + P S ++ +++ML GR EA + +K +G + N+
Sbjct: 638 IDEGLKIFEEMREVYNIQP-SSEHYCCITDMLGRVGRVNEAY---EFVKGLGEEGNIAEL 693
Query: 555 W 555
W
Sbjct: 694 W 694
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 201/404 (49%), Gaps = 21/404 (5%)
Query: 12 LLESAVSTRSPL-LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL 70
L SAVS + LGR H + ++ LP + N L+ MYS+ ++ + V
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFR-ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE 381
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQA 130
R VV+W ++I+ V NG L+ M++ + + T + A+S+L+ GKQ
Sbjct: 382 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQT 441
Query: 131 HALALKGGQIYDVFVGCSAF--DMYSKTGLRVDARNMFD--EMPQRNLATWNAYISNAVQ 186
HA ++ G ++ G +++ DMYSK+GL ++ +F+ +R+ ATWN+ IS Q
Sbjct: 442 HAFLIRQGIQFE---GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQ 498
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
+G + F++ L + PN++T + L AC+ + LG+QLH F IR ++V V
Sbjct: 499 NGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFV 558
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE 306
A+ L+D Y K G I +E +FS+ RN VT+ +M+ Q+ ERA +FL ++
Sbjct: 559 ASALVDMYSKAGAIKYAEDMFSQT--KERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616
Query: 307 A-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSA----LVDLYGKCGS 361
+P +VLSAC+ G ++ G + + NI S + D+ G+ G
Sbjct: 617 GIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVY---NIQPSSEHYCCITDMLGRVGR 673
Query: 362 IENAEQVFSEMPQRNIVT--WNAMIGGYAHQGDVDMALGLFEEM 403
+ A + + + + W +++G G++++A + E +
Sbjct: 674 VNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERL 717
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 204/454 (44%), Gaps = 23/454 (5%)
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN--DFTFPCVFKASSSLQMPITGKQ 129
T V W ++I G + N ALL + M++ N +T+ KA + + GK
Sbjct: 69 TTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKA 128
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVD------ARNMFDEMPQRNLATWNAYISN 183
H ++ Q V S +MY D R +FD M ++N+ WN IS
Sbjct: 129 VHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISW 188
Query: 184 AVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSG--YR 241
V+ GR+ +A F + + +P+ ++F A + + + +++ G Y
Sbjct: 189 YVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYV 248
Query: 242 EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFL 301
+D+ V + I Y + GDI SS VF RN+ W +M+ VQN + +FL
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSC--VERNIEVWNTMIGVYVQNDCLVESIELFL 306
Query: 302 QARKEAEPTDFMISSVL--SACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
+A E ++ +L SA + L +ELGR H K + I + ++L+ +Y +C
Sbjct: 307 EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
GS+ + VF M +R++V+WN MI + G D L L EM G Y+T+ +
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ--KQGFKIDYITVTA 424
Query: 420 VLSACS--RAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP 477
+LSA S R + H F +++ + E G Y ++D+ ++SGL+ + + +
Sbjct: 425 LLSAASNLRNKEIGKQTHAF-LIRQGIQFE-GMNSY--LIDMYSKSGLIRISQKLFEGSG 480
Query: 478 I-HPTISIWGALLGACRMHGKTKLGKVAAEKLFE 510
+ W +++ +G T+ + K+ E
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
+++LL +A + R+ +G+ HA +IR + + ++LI+MYSK L+ +Q + +
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIR--QGIQFEGMNSYLIDMYSKSGLIRISQKLFEGS 479
Query: 69 HL--RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
R TW S+I+G NG L F M ++PN T + A S +
Sbjct: 480 GYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDL 539
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
GKQ H +++ +VFV + DMYSK G A +MF + +RN T+ I Q
Sbjct: 540 GKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQ 599
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
G A+ F +P++ITF A L+AC+
Sbjct: 600 HGMGERAISLFLSMQESGIKPDAITFVAVLSACS 633
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 20/348 (5%)
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPN--SITFCAFLNAC 219
AR +FD +P+ WN I + + +A+ + N + T+ + L AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 220 ADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKC--------GDIVSSEMVFSRIG 271
A+ L G+ +H +IR V N L++ Y C D+V VF +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK--VFDNM- 174
Query: 272 RSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTDFMISSVLSACAELGGLELG 330
R+NVV W ++++ V+ AC F + R E +P+ +V A + ++
Sbjct: 175 -RRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 331 RSVHALAVKACVD--ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYA 388
+ L +K + +++FV S+ + +Y + G IE++ +VF +RNI WN MIG Y
Sbjct: 234 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 293
Query: 389 HQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEP 448
+ ++ LF E +GS I VT + SA S VE G + + +R P
Sbjct: 294 QNDCLVESIELFLE-AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 449 GAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
+ +V + +R G V +++ +M +S W ++ A +G
Sbjct: 353 IVIVNSLMV-MYSRCGSVHKSFGVFLSMRERDVVS-WNTMISAFVQNG 398
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 336 bits (861), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 191/536 (35%), Positives = 289/536 (53%), Gaps = 16/536 (2%)
Query: 25 GRAVHAQIIRSHETPLPSF---LCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIA 81
G+ +H Q+++ +PSF + L++MY+K + SA V + LR VV WTS+IA
Sbjct: 161 GKKIHCQLVK-----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIA 215
Query: 82 GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIY 141
G V N L+ F MR + V N++T+ + A + L GK H +K G
Sbjct: 216 GYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIEL 275
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
+ S DMY K G +AR +F+E +L W A I +G +A+ F++
Sbjct: 276 SSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK 335
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
V +PN +T + L+ C L LGR +H I+ G D +VAN L+ Y KC
Sbjct: 336 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNR 394
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSA 320
++ VF S +++V W S+++ QN A +F + E+ P ++S+ SA
Sbjct: 395 DAKYVFEM--ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSA 452
Query: 321 CAELGGLELGRSVHALAVKA--CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIV 378
CA LG L +G S+HA +VK ++ VG+AL+D Y KCG ++A +F + ++N +
Sbjct: 453 CASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTI 512
Query: 379 TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFE 438
TW+AMIGGY QGD +L LFEEM P+ T S+LSAC G V G F
Sbjct: 513 TWSAMIGGYGKQGDTIGSLELFEEMLKKQ--QKPNESTFTSILSACGHTGMVNEGKKYFS 570
Query: 439 SMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKT 498
SM + Y P +HY C+VD+LAR+G +++A + I+ MPI P + +GA L C MH +
Sbjct: 571 SMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRF 630
Query: 499 KLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
LG++ +K+ +L P+D+ +V++SN+ AS GRW +A VR MK G+ K G+S
Sbjct: 631 DLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 9/324 (2%)
Query: 112 PCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQ 171
PC S + + +Q+H + G + D+ + +Y G DAR +FD++P+
Sbjct: 46 PCFLLLSKCTNID-SLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE 104
Query: 172 RNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQ 230
+ W + + S++ V + + L HG + I F L AC + L G++
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKALKACTELQDLDNGKK 163
Query: 231 LHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQN 290
+H +++ ++V V GL+D Y KCG+I S+ VF+ I + RNVV W SM+A V+N
Sbjct: 164 IHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDI--TLRNVVCWTSMIAGYVKN 220
Query: 291 HEEERACLVFLQARK-EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVG 349
E ++F + R+ ++ +++ AC +L L G+ H VK+ ++ + +
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 350 SALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCG 409
++L+D+Y KCG I NA +VF+E ++V W AMI GY H G V+ AL LF++M
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK--GVE 338
Query: 410 IAPSYVTLVSVLSACSRAGAVESG 433
I P+ VT+ SVLS C +E G
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELG 362
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 216/650 (33%), Positives = 318/650 (48%), Gaps = 51/650 (7%)
Query: 46 NHLINMYSKLDLLNSA----QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
N LI Y++L ++A Q + + V TWT++I+G ++NG AL F M
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD 161
V PN T A S L++ G + H++A+K G I DV VG S DMYSK G D
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
AR +FD + +++ TWN+ I+ Q G A F + PN IT+
Sbjct: 406 ARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW--------- 456
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI---GRSRRNVV 278
N +I Y K GD + +F R+ G+ +RN
Sbjct: 457 --------------------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTA 490
Query: 279 TWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHALA 337
TW ++A +QN +++ A +F + + P I S+L ACA L G ++ R +H
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV 550
Query: 338 VKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMAL 397
++ +D V +AL D Y K G IE + +F M ++I+TWN++IGGY G AL
Sbjct: 551 LRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPAL 610
Query: 398 GLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVV 457
LF +M + GI P+ TL S++ A G V+ G +F S+ Y I P EH + +V
Sbjct: 611 ALFNQMK--TQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMV 668
Query: 458 DLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSG 517
L R+ ++ A +FIQ M I IW + L CR+HG + AAE LF L+PE++
Sbjct: 669 YLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTA 728
Query: 518 NHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSE 577
++S + A + + K +D +KK +G SWI V+N +H F D S
Sbjct: 729 TESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQS----KL 784
Query: 578 IQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHG--VP 635
+L L E+M + D +E+E + HSEK A+AFGLI+
Sbjct: 785 CTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTT 844
Query: 636 IRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
IRI KNLR+C DCH K++S+ G +I++ D H FK+G CSCKDYW
Sbjct: 845 IRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 216/485 (44%), Gaps = 41/485 (8%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
LLES + + S LGR +HA+ E + F+ L++MY+K + A+ V R
Sbjct: 87 LLESCIDSGSIHLGRILHARFGLFTEPDV--FVETKLLSMYAKCGCIADARKVFDSMRER 144
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAH 131
+ TW+++I R+ F M +D V P+DF FP + + ++ GK H
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 132 ALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSL 191
++ +K G + V S +Y+K G A F M +R++ WN+ + Q+G+
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE 264
Query: 192 DAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLI 251
+AV KE P +T+ I+ GY +
Sbjct: 265 EAVELVKEMEKEGISPGLVTWN---------------------ILIGGYNQ--------- 294
Query: 252 DFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQA-RKEAEPT 310
GKC + G + +V TW +M++ L+ N +A +F + P
Sbjct: 295 --LGKCDAAMDLMQKMETFGIT-ADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 311 DFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFS 370
I S +SAC+ L + G VH++AVK +++ VG++LVD+Y KCG +E+A +VF
Sbjct: 352 AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 371 EMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAV 430
+ +++ TWN+MI GY G A LF M + P+ +T +++S + G
Sbjct: 412 SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ--DANLRPNIITWNTMISGYIKNGDE 469
Query: 431 ESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH---PTISIWGA 487
M +F+ M++ +++ + ++ ++G D A E + M P +
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 488 LLGAC 492
LL AC
Sbjct: 530 LLPAC 534
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 181/380 (47%), Gaps = 26/380 (6%)
Query: 186 QDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY--RED 243
++G L+A A + T+ L +C D +HLGR LHA R G D
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPD 114
Query: 244 VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALV-QNHEEERACLVFLQ 302
V V L+ Y KCG I + VF + RN+ TW +M+ A +N E A L L
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSM--RERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 303 ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSI 362
+ P DF+ +L CA G +E G+ +H++ +K + + V ++++ +Y KCG +
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 232
Query: 363 ENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLS 422
+ A + F M +R+++ WN+++ Y G + A+ L +EM GI+P VT ++
Sbjct: 233 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME--KEGISPGLVTWNILIG 290
Query: 423 ACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM---PIH 479
++ G ++ M + + M E + I + ++ L +G+ +A + + M +
Sbjct: 291 GYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349
Query: 480 PTISIWGALLGACR----MHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEA 535
P + + AC ++ +++ +A + F +D GN +V +M + G+ E+A
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF-IDDVLVGNSLV--DMYSKCGKLEDA 406
Query: 536 TIVRKEMKDIGIKKNVGYSW 555
V +K+ K+V Y+W
Sbjct: 407 RKVFDSVKN----KDV-YTW 421
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 196/605 (32%), Positives = 315/605 (52%), Gaps = 26/605 (4%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS 66
++ +S+L S + LG +HA ++S + + ++MY+K D + AQ +
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKS-DFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
+ ++ ++I G ALL F + + ++ + VF+A + ++
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
G Q + LA+K DV V +A DMY K +A +FDEM +R+ +WNA I+ Q
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
+G+ + + F L EP+ TF + L AC L G ++H+ I++SG + SV
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSV 519
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNV-------------------VTWCSMLAAL 287
LID Y KCG I +E + SR + R NV V+W S+++
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQ-RANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 288 VQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENI 346
V + E A ++F + + P F ++VL CA L LG+ +HA +K + ++
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 638
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLG 406
++ S LVD+Y KCG + ++ +F + +R+ VTWNAMI GYAH G + A+ LFE M L
Sbjct: 639 YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 698
Query: 407 SCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLV 466
+ I P++VT +S+L AC+ G ++ G+ F MK Y ++P HY+ +VD+L +SG V
Sbjct: 699 N--IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 467 DRAYEFIQNMPIHPTISIWGALLGACRMH-GKTKLGKVAAEKLFELDPEDSGNHVVLSNM 525
RA E I+ MP IW LLG C +H ++ + A L LDP+DS + +LSN+
Sbjct: 757 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 816
Query: 526 LASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKL 585
A AG WE+ + +R+ M+ +KK G SW+ +K+ +HVF D +H + EI L +
Sbjct: 817 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLI 876
Query: 586 REEMK 590
EMK
Sbjct: 877 YSEMK 881
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/573 (26%), Positives = 275/573 (47%), Gaps = 48/573 (8%)
Query: 3 FHPPN-LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLC-NHLINMYSKLDLLNS 60
F P +L+ LL+ ++R + V ++ PL + N +IN YSK + +
Sbjct: 79 FRPTTFVLNCLLQVYTNSRDFVSASMVFDKM------PLRDVVSWNKMINGYSKSNDMFK 132
Query: 61 AQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSS 120
A ++ +R VV+W S+++G + NG + ++ FV+M R+ ++ + TF + K S
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 192
Query: 121 LQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAY 180
L+ G Q H + ++ G DV + DMY+K V++ +F +P++N +W+A
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 252
Query: 181 ISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY 240
I+ VQ+ A+ FKE V+ + + + L +CA L LG QLHA ++S +
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 241 REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF 300
D V +D Y KC ++ ++++F R ++ +M+ Q +A L+F
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLF 370
Query: 301 LQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
+ D +S V ACA + GL G ++ LA+K+ + ++ V +A +D+YGKC
Sbjct: 371 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKC 430
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
++ A +VF EM +R+ V+WNA+I + G L LF M I P T S
Sbjct: 431 QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR--IEPDEFTFGS 488
Query: 420 VLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV----VDLLARSGLVDRAYE---- 471
+L AC+ G++ GM I S+ ++ G + V +D+ ++ G+++ A +
Sbjct: 489 ILKACT-GGSLGYGMEIHSSI-----VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 472 FIQNMPIHPTIS---------------IWGALLGACRMHGKTKLGKVAAEKLFEL--DPE 514
F Q + T+ W +++ M +++ ++ ++ E+ P+
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 515 DSGNHVVLSNM--LASAGRWEE--ATIVRKEMK 543
VL LASAG ++ A +++KE++
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQ 635
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 135/286 (47%), Gaps = 37/286 (12%)
Query: 172 RNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQL 231
R++ ++N ++ + R + + F +FL ++ F CA + L LG+Q
Sbjct: 12 RSVVSFNRCLTEKIS-YRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 232 HAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI-------------GRSR---- 274
HA +I SG+R V N L+ Y D VS+ MVF ++ G S+
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 275 ------------RNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD---FMISSVLS 319
R+VV+W SML+ +QN E ++ VF+ +E D F I +L
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI--ILK 188
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVT 379
C+ L LG +H + V+ D ++ SAL+D+Y K + +VF +P++N V+
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 380 WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
W+A+I G + +AL F+EM + G++ S SVL +C+
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS--IYASVLRSCA 292
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 88/231 (38%), Gaps = 51/231 (22%)
Query: 300 FLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
FL T+F S V CA+ G LELG+ HA + + FV + L+ +Y
Sbjct: 39 FLNQVNSVSTTNF--SFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNS 96
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM---------------- 403
+A VF +MP R++V+WN MI GY+ D+ A F M
Sbjct: 97 RDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYL 156
Query: 404 -------------TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGA 450
+G GI T +L CS GM I + +
Sbjct: 157 QNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV------- 209
Query: 451 EHYACVVDLLARSGLVD---RAYEFI------QNMPIHPTISIWGALLGAC 492
C D++A S L+D + F+ Q +P ++S W A++ C
Sbjct: 210 ---GCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS-WSAIIAGC 256
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 166/415 (40%), Positives = 251/415 (60%), Gaps = 7/415 (1%)
Query: 273 SRRNVVTWCSMLAALVQN--HEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELG 330
S +NV+TW M+ V+N +EE L + + + +P F +S L+ACA LG L
Sbjct: 125 SDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHA 184
Query: 331 RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQ 390
+ VH+L + + ++ N + SALVD+Y KCG I + +VF + + ++ WNAMI G+A
Sbjct: 185 KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATH 244
Query: 391 GDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGA 450
G A+ +F EM + ++P +T + +L+ CS G +E G F M + I+P
Sbjct: 245 GLATEAIRVFSEME--AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKL 302
Query: 451 EHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE 510
EHY +VDLL R+G V AYE I++MPI P + IW +LL + R + +LG++A +
Sbjct: 303 EHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQ---N 359
Query: 511 LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDS 570
L SG++V+LSN+ +S +WE A VR+ M GI+K G SW+ +H F+A D+
Sbjct: 360 LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDT 419
Query: 571 SHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIAL 630
SH + I +L L ++ K G+ DT+L L D+ +EEK + YHSEK+ALA+ ++
Sbjct: 420 SHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKS 479
Query: 631 PHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
G IRI KN+R+C DCH+ IK +S+++ R II+RD RFHRF+DG CSC+DYW
Sbjct: 480 SPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 4/258 (1%)
Query: 61 AQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQPNDFTFPCVFKASS 119
A+ VL + V+TW +I G V N ++ AL NM ++PN F+F A +
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 120 SLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNA 179
L K H+L + G + + + D+Y+K G +R +F + + +++ WNA
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 180 YISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRS- 238
I+ G + +A+ F E H P+SITF L C+ L G++ + R
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 239 GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACL 298
+ + ++D G+ G + + + + +VV W S+L++ + ++
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMP-IEPDVVIWRSLLSS-SRTYKNPELGE 354
Query: 299 VFLQARKEAEPTDFMISS 316
+ +Q +A+ D+++ S
Sbjct: 355 IAIQNLSKAKSGDYVLLS 372
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 358 KCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTL 417
K G A++V +N++TWN MIGGY + AL + M L I P+ +
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM-LSFTDIKPNKFSF 168
Query: 418 VSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP 477
S L+AC+R G + + M + IE A + +VD+ A+ G + + E ++
Sbjct: 169 ASSLAACARLGDLHHAKWVHSLMID-SGIELNAILSSALVDVYAKCGDIGTSREVFYSVK 227
Query: 478 IHPTISIWGALLGACRMHG 496
+SIW A++ HG
Sbjct: 228 -RNDVSIWNAMITGFATHG 245
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 188/536 (35%), Positives = 302/536 (56%), Gaps = 22/536 (4%)
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSIT-----FCAF- 215
A +F +P+ WNA I A ++ L ++I C+F
Sbjct: 56 AVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFT 115
Query: 216 LNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR 275
L ACA L QLH I R G D + L+D Y K GD++S+ +F + R
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM--PVR 173
Query: 276 NVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSV- 333
+V +W +++A LV + A ++ + E ++ + + L AC+ LG ++ G ++
Sbjct: 174 DVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF 233
Query: 334 HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGD 392
H + ++N+ V +A +D+Y KCG ++ A QVF + ++++VTWN MI G+A G+
Sbjct: 234 HGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGE 288
Query: 393 VDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEH 452
AL +F++ L GI P V+ ++ L+AC AG VE G+ +F +M +E +H
Sbjct: 289 AHRALEIFDK--LEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKH 345
Query: 453 YACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELD 512
Y CVVDLL+R+G + A++ I +M + P +W +LLGA ++ ++ ++A+ ++ E+
Sbjct: 346 YGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMG 405
Query: 513 PEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSH 572
+ G+ V+LSN+ A+ GRW++ VR +M+ +KK G S+I K +H F D SH
Sbjct: 406 VNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSH 465
Query: 573 EKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPH 632
E+ EI + ++R ++++ GY T L L D+ +EEK + + YHSEK+A+A+GL+ +
Sbjct: 466 EQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDG 525
Query: 633 G---VPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
P+R+ NLRICGDCH K IS+I REIIVRD RFHRFKDG CSC+D+W
Sbjct: 526 ADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 151/344 (43%), Gaps = 15/344 (4%)
Query: 109 FTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDE 168
FT +A S M Q H + G D + + D YSK G + A +FDE
Sbjct: 114 FTLKACARALCSSAMD----QLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 169 MPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLG 228
MP R++A+WNA I+ V R+ +A+ +K + +T A L AC+ HLG
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACS-----HLG 224
Query: 229 RQLHAFIIRSGYRED-VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL 287
I GY D V V+N ID Y KCG + + VF + +++VVTW +M+
Sbjct: 225 DVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQF-TGKKSVVTWNTMITGF 283
Query: 288 VQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENI 346
+ E RA +F + +P D + L+AC G +E G SV V+ N+
Sbjct: 284 AVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNM 343
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMPQ-RNIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
+VDL + G + A + M + V W +++G DV+MA E+
Sbjct: 344 KHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKE 403
Query: 406 GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
+V L +V +A R V ES K++ +I PG
Sbjct: 404 MGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMES-KQVKKI-PG 445
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 6/193 (3%)
Query: 28 VHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNG 87
+H QI R + S LC L++ YSK L SA + +R V +W +LIAG V+
Sbjct: 131 LHCQINRRGLSA-DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGN 189
Query: 88 RFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGC 147
R A+ + M + ++ ++ T A S L G+ G +V V
Sbjct: 190 RASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN----IFHGYSNDNVIVSN 245
Query: 148 SAFDMYSKTGLRVDARNMFDEMP-QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE 206
+A DMYSK G A +F++ ++++ TWN I+ G + A+ F + +
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIK 305
Query: 207 PNSITFCAFLNAC 219
P+ +++ A L AC
Sbjct: 306 PDDVSYLAALTAC 318
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 304/578 (52%), Gaps = 26/578 (4%)
Query: 24 LGRAVHAQIIRS--HETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIA 81
GR +H +++ H P ++C L++MYSK ++ A+ V S + + W +++A
Sbjct: 290 FGRQIHCDVVKMGLHNDP---YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVA 346
Query: 82 GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIY 141
N +AL F MR+ V P+ FT V S L + GK HA K
Sbjct: 347 AYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS 406
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
+ + +YSK G DA +F M ++++ W + IS ++G+ FKE L
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK-------FKEAL 459
Query: 202 CVHGE---------PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLID 252
V G+ P+S + NACA L G Q+H +I++G +V V + LID
Sbjct: 460 KVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLID 519
Query: 253 FYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTD 311
Y KCG + VF+ + S N+V W SM++ +N+ E + +F L + P
Sbjct: 520 LYSKCGLPEMALKVFTSM--STENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDS 577
Query: 312 FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSE 371
I+SVL A + L G+S+H ++ + + + +AL+D+Y KCG + AE +F +
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 637
Query: 372 MPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVE 431
M ++++TWN MI GY GD AL LF+EM G +P VT +S++SAC+ +G VE
Sbjct: 638 MQHKSLITWNLMIYGYGSHGDCITALSLFDEMK--KAGESPDDVTFLSLISACNHSGFVE 695
Query: 432 SGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGA 491
G +IFE MK+ Y IEP EHYA +VDLL R+GL++ AY FI+ MPI SIW LL A
Sbjct: 696 EGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSA 755
Query: 492 CRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNV 551
R H +LG ++AEKL ++PE +V L N+ AG EA + MK+ G+ K
Sbjct: 756 SRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQP 815
Query: 552 GYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEM 589
G SWI V +R +VF + SS +EI +L +L+ M
Sbjct: 816 GCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 255/541 (47%), Gaps = 29/541 (5%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHV-LSLTHLRTVVTWTSLIAGC 83
G+ +H ++R + SFL LI+MY K L A V + + VV W +I G
Sbjct: 189 GKQIHGFMLR-NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF 247
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
+G ++L ++ + + V+ +F A S + G+Q H +K G D
Sbjct: 248 GGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP 307
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
+V S MYSK G+ +A +F + + L WNA ++ ++ A+ F
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK 367
Query: 204 HGEPNSITFCAFLNACADRLGLH-LGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVS 262
P+S T ++ C+ LGL+ G+ +HA + + + ++ + L+ Y KCG
Sbjct: 368 SVLPDSFTLSNVISCCS-VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPD 426
Query: 263 SEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE---PTDFMISSVLS 319
+ +VF + +++V W S+++ L +N + + A VF + + + P +++SV +
Sbjct: 427 AYLVFKSM--EEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVT 379
ACA L L G VH +K + N+FVGS+L+DLY KCG E A +VF+ M N+V
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 380 WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG--MHIF 437
WN+MI Y+ ++++ LF M S GI P V++ SVL A S ++ G +H +
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLML--SQGIFPDSVSITSVLVAISSTASLLKGKSLHGY 602
Query: 438 ESMKEIYRIEPGAEHYA-CVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
I P H ++D+ + G A + M H ++ W ++ HG
Sbjct: 603 TLRLGI----PSDTHLKNALIDMYVKCGFSKYAENIFKKMQ-HKSLITWNLMIYGYGSHG 657
Query: 497 KTKLGKVAAEKLFE--LDPEDSGNHVVLSNMLAS---AGRWEEATIVRKEMK-DIGIKKN 550
+ A LF+ +S + V +++++ +G EE + + MK D GI+ N
Sbjct: 658 DC----ITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPN 713
Query: 551 V 551
+
Sbjct: 714 M 714
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 224/502 (44%), Gaps = 40/502 (7%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVL----- 65
SLL++ + + G+ +H ++ P F+ L+NMY K L+ A V
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDP-FIATSLVNMYVKCGFLDYAVQVFDGWSQ 123
Query: 66 --SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA---SSS 120
S R V W S+I G RF + F M V+P+ F+ V +
Sbjct: 124 SQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGN 183
Query: 121 LQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQR-NLATWNA 179
+ GKQ H L+ D F+ + DMY K GL +DA +F E+ + N+ WN
Sbjct: 184 FRRE-EGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNV 242
Query: 180 YISNAVQDG---RSLDAVGAFKEFLCVHGEPNSI-----TFCAFLNACADRLGLHLGRQL 231
I G SLD L + + NS+ +F L AC+ GRQ+
Sbjct: 243 MIVGFGGSGICESSLD--------LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI 294
Query: 232 HAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNH 291
H +++ G D V L+ Y KCG + +E VFS + R + W +M+AA +N
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI--WNAMVAAYAEND 352
Query: 292 EEERACLVF-LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGS 350
A +F +K P F +S+V+S C+ LG G+SVHA K + + S
Sbjct: 353 YGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES 412
Query: 351 ALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGI 410
AL+ LY KCG +A VF M ++++V W ++I G G AL +F +M +
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 472
Query: 411 APSYVTLVSVLSACSRAGAVESGMHIFESMKE---IYRIEPGAEHYACVVDLLARSGLVD 467
P + SV +AC+ A+ G+ + SM + + + G+ ++DL ++ GL +
Sbjct: 473 KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSS----LIDLYSKCGLPE 528
Query: 468 RAYEFIQNMPIHPTISIWGALL 489
A + +M ++ W +++
Sbjct: 529 MALKVFTSMSTENMVA-WNSMI 549
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 194/435 (44%), Gaps = 24/435 (5%)
Query: 80 IAGCVNNGRFVAALLHFVNMRRDCVQP---NDFTFPCVFKASSSLQMPITGKQAHALALK 136
I + G ++ AL H + + D P + FTFP + KA S+L GK H +
Sbjct: 31 IRALIQKGEYLQAL-HLYS-KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVV 88
Query: 137 GGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQ-------RNLATWNAYISNAVQDGR 189
G YD F+ S +MY K G A +FD Q R++ WN+ I + R
Sbjct: 89 LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRR 148
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHL--GRQLHAFIIRSGYREDVSVA 247
+ VG F+ L P++ + ++ G+Q+H F++R+ D +
Sbjct: 149 FKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLK 208
Query: 248 NGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA 307
LID Y K G + + VF I + NVV W M+ + E + +++ A+ +
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEI-EDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNS 267
Query: 308 -EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
+ + L AC++ GR +H VK + + +V ++L+ +Y KCG + AE
Sbjct: 268 VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAE 327
Query: 367 QVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
VFS + + + WNAM+ YA AL LF M S + P TL +V+S CS
Sbjct: 328 TVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKS--VLPDSFTLSNVISCCSV 385
Query: 427 AGAVESGMHIFESMKEIYR--IEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
G G + E+++ I+ + + ++ L ++ G AY ++M ++
Sbjct: 386 LGLYNYGKSVH---AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVA- 441
Query: 485 WGALLGACRMHGKTK 499
WG+L+ +GK K
Sbjct: 442 WGSLISGLCKNGKFK 456
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 328 bits (841), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 191/579 (32%), Positives = 311/579 (53%), Gaps = 10/579 (1%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPS--FLCNHLINMYSKLDLLNSAQHV 64
++LS +L++ + + G ++HA ++ T L S ++ + L++MY ++ ++ + V
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVK---TSLLSSVYVGSSLLDMYKRVGKIDKSCRV 165
Query: 65 LSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMP 124
S R VTWT++I G V+ GR+ L +F M R + +TF KA + L+
Sbjct: 166 FSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQV 225
Query: 125 ITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNA 184
GK H + G + + V S MY++ G D +F+ M +R++ +W + I
Sbjct: 226 KYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAY 285
Query: 185 VQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDV 244
+ G+ + AV F + PN TF + +ACA L G QLH ++ G + +
Sbjct: 286 KRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSL 345
Query: 245 SVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR 304
SV+N ++ Y CG++VS+ ++F G R++++W +++ Q E F R
Sbjct: 346 SVSNSMMKMYSTCGNLVSASVLFQ--GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 305 KEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
+ +PTDF ++S+LS + +E GR VHALA+ +++N V S+L+++Y KCGSI+
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIK 463
Query: 364 NAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
A +F E + +IV+ AMI GYA G A+ LFE+ G P VT +SVL+A
Sbjct: 464 EASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSL--KVGFRPDSVTFISVLTA 521
Query: 424 CSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTIS 483
C+ +G ++ G H F M+E Y + P EHY C+VDLL R+G + A + I M
Sbjct: 522 CTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDV 581
Query: 484 IWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMK 543
+W LL AC+ G + G+ AAE++ ELDP + V L+N+ +S G EEA VRK MK
Sbjct: 582 VWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMK 641
Query: 544 DIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAML 582
G+ K G+S I +K+ V F + D H ++ +I +L
Sbjct: 642 AKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 224/496 (45%), Gaps = 13/496 (2%)
Query: 18 STRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWT 77
+T LL + V I+R + F N + L +A+ V +V+WT
Sbjct: 16 TTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWT 75
Query: 78 SLIAGCVNNGRFVAALLHFVNMR--RDCVQPNDFTFPCVFKASSSLQMPITGKQAHALAL 135
S+I V AL+ F MR V P+ V KA G+ HA A+
Sbjct: 76 SIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAV 135
Query: 136 KGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVG 195
K + V+VG S DMY + G + +F EMP RN TW A I+ V GR + +
Sbjct: 136 KTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLT 195
Query: 196 AFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYG 255
F E ++ TF L ACA + G+ +H +I G+ + VAN L Y
Sbjct: 196 YFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYT 255
Query: 256 KCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK-EAEPTDFMI 314
+CG++ +F + S R+VV+W S++ A + +E +A F++ R + P +
Sbjct: 256 ECGEMQDGLCLFENM--SERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTF 313
Query: 315 SSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ 374
+S+ SACA L L G +H + +++++ V ++++ +Y CG++ +A +F M
Sbjct: 314 ASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRC 373
Query: 375 RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGM 434
R+I++W+ +IGGY G + F M G P+ L S+LS +E G
Sbjct: 374 RDIISWSTIIGGYCQAGFGEEGFKYFSWMR--QSGTKPTDFALASLLSVSGNMAVIEGGR 431
Query: 435 HIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRM 494
+ ++ + +E + + ++++ ++ G + A +S+ A++
Sbjct: 432 QV-HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSL-TAMINGYAE 489
Query: 495 HGKTKLGKVAAEKLFE 510
HGK+K A LFE
Sbjct: 490 HGKSK----EAIDLFE 501
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 286/523 (54%), Gaps = 13/523 (2%)
Query: 61 AQHVLSLTHLRTVVTWTSLIA----GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFK 116
A+ +L ++ W SLI G N R + L + +MRR+ V P+ TFP + K
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRL--SFLAYRHMRRNGVIPSRHTFPPLLK 112
Query: 117 ASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLAT 176
A L+ Q HA +K G D FV S YS +GL A +FD +++ T
Sbjct: 113 AVFKLR-DSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVT 171
Query: 177 WNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFII 236
W A I V++G + +A+ F E N +T + L A + GR +H +
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 237 RSG-YREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEER 295
+G + DV + + L+D YGKC ++ VF + RNVVTW +++A VQ+ ++
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEM--PSRNVVTWTALIAGYVQSRCFDK 289
Query: 296 ACLVFLQARK-EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVD 354
LVF + K + P + +SSVLSACA +G L GR VH +K ++ N G+ L+D
Sbjct: 290 GMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLID 349
Query: 355 LYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSY 414
LY KCG +E A VF + ++N+ TW AMI G+A G A LF T+ S ++P+
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLF--YTMLSSHVSPNE 407
Query: 415 VTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQ 474
VT ++VLSAC+ G VE G +F SMK + +EP A+HYAC+VDL R GL++ A I+
Sbjct: 408 VTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIE 467
Query: 475 NMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEE 534
MP+ PT +WGAL G+C +H +LGK AA ++ +L P SG + +L+N+ + + W+E
Sbjct: 468 RMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDE 527
Query: 535 ATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSE 577
VRK+MKD + K+ G+SWI VK ++ F A D S+
Sbjct: 528 VARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESD 570
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 188/373 (50%), Gaps = 9/373 (2%)
Query: 29 HAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGR 88
HA I++ P F+ N LI+ YS L + A + + VVTWT++I G V NG
Sbjct: 126 HAHIVKFGLDSDP-FVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 89 FVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIY-DVFVGC 147
A+++FV M++ V N+ T V KA+ ++ G+ H L L+ G++ DVF+G
Sbjct: 185 ASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGS 244
Query: 148 SAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLD-AVGAFKEFLCVHGE 206
S DMY K DA+ +FDEMP RN+ TW A I+ VQ R D + F+E L
Sbjct: 245 SLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ-SRCFDKGMLVFEEMLKSDVA 303
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
PN T + L+ACA LH GR++H ++I++ + + LID Y KCG + + +V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 267 FSRIGRSRRNVVTWCSMLAAL-VQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELG 325
F R+ +NV TW +M+ + + L + P + +VLSACA G
Sbjct: 364 FERL--HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGG 421
Query: 326 GLELGRSVH-ALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI-VTWNAM 383
+E GR + ++ + ++ + +VDL+G+ G +E A+ + MP V W A+
Sbjct: 422 LVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
Query: 384 IGGYAHQGDVDMA 396
G D ++
Sbjct: 482 FGSCLLHKDYELG 494
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL 70
S+L++A GR+VH + + F+ + L++MY K + AQ V
Sbjct: 209 SVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS 268
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQA 130
R VVTWT+LIAG V + F +L F M + V PN+ T V A + + G++
Sbjct: 269 RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
H +K + G + D+Y K G +A +F+ + ++N+ TW A I+ G +
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 388
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG- 249
DA F L H PN +TF A L+ACA + GR+L F+ G A+
Sbjct: 389 RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL--FLSMKGRFNMEPKADHY 446
Query: 250 --LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEE 294
++D +G+ G + ++ + R+ NVV W ++ + + + + E
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNVV-WGALFGSCLLHKDYE 492
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/604 (31%), Positives = 310/604 (51%), Gaps = 21/604 (3%)
Query: 22 PLLGRAVHAQIIRSHETPLPS---------FLCNHLINMYSKLDLLNSAQHVLSLTHLRT 72
P LG +HA II++ E P + N L+++Y+K L A + +R
Sbjct: 61 PHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRD 120
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDF---TFPCVFKASSSLQMPITGKQ 129
V++ + G + N + FV ++R + F T V + + + K
Sbjct: 121 VISQNIVFYGFLRNRETESG---FVLLKR-MLGSGGFDHATLTIVLSVCDTPEFCLVTKM 176
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR 189
HALA+ G ++ VG Y K G V R +FD M RN+ T A IS +++
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
D + F PNS+T+ + L AC+ + G+Q+HA + + G ++ + +
Sbjct: 237 HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEP 309
L+D Y KCG I + +F + + V+ +L L QN EE A F++ +
Sbjct: 297 LMDMYSKCGSIEDAWTIFE--STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 310 TDF-MISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
D ++S+VL L LG+ +H+L +K N FV + L+++Y KCG + +++ V
Sbjct: 355 IDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTV 414
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F MP+RN V+WN+MI +A G AL L+EEMT + + P+ VT +S+L ACS G
Sbjct: 415 FRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT--TLEVKPTDVTFLSLLHACSHVG 472
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGAL 488
++ G + MKE++ IEP EHY C++D+L R+GL+ A FI ++P+ P IW AL
Sbjct: 473 LIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQAL 532
Query: 489 LGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIK 548
LGAC HG T++G+ AAE+LF+ P+ S H++++N+ +S G+W+E K MK +G+
Sbjct: 533 LGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVT 592
Query: 549 KNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDE 608
K G S I ++++ H F +D H + I +L+ L M GY PD L D+
Sbjct: 593 KETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGDD 652
Query: 609 EKAS 612
+
Sbjct: 653 RNGT 656
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 202/717 (28%), Positives = 364/717 (50%), Gaps = 48/717 (6%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSL--- 67
++L + V LG +H I++S F+ N L+++Y K D +S VL L
Sbjct: 186 AILTACVRVSRFSLGIQIHGLIVKSGFLN-SVFVSNSLMSLYDK-DSGSSCDDVLKLFDE 243
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRR-DCVQPNDFTFPCVFKASSSLQMPIT 126
R V +W ++++ V G+ A F M R + + FT + + + + +
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLR 303
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKT------------------------------ 156
G++ H A++ G + ++ V + YSK
Sbjct: 304 GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMS 363
Query: 157 -GLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAF 215
G+ A +F + ++N T+NA ++ ++G L A+ F + L E + +
Sbjct: 364 FGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSA 423
Query: 216 LNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR 275
++AC + Q+H F I+ G + + L+D +C + +E +F + +
Sbjct: 424 VDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLD 483
Query: 276 NVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM----ISSVLSACAELGGLELGR 331
+ S++ +N ++A +F R E F+ ++ +L+ C LG E+G
Sbjct: 484 SSKATTSIIGGYARNGLPDKAVSLF--HRTLCEQKLFLDEVSLTLILAVCGTLGFREMGY 541
Query: 332 SVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQG 391
+H A+KA +I +G++L+ +Y KC ++A ++F+ M + ++++WN++I Y Q
Sbjct: 542 QIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQR 601
Query: 392 DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA--CSRAGAVESGMHIFESMKEIYRIEPG 449
+ D AL L+ M I P +TL V+SA + + + S +F SMK IY IEP
Sbjct: 602 NGDEALALWSRMNEKE--IKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPT 659
Query: 450 AEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLF 509
EHY V +L GL++ A + I +MP+ P +S+ ALL +CR+H T + K A+ +
Sbjct: 660 TEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLIL 719
Query: 510 ELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKD 569
PE +++ SN+ +++G W + ++R+EM++ G +K+ SWI +N++H F A+D
Sbjct: 720 STKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARD 779
Query: 570 SSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIA 629
+SH + +I L L E K GY P+T L ++++ K S +++HS K+A+ +G+++
Sbjct: 780 TSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILS 839
Query: 630 L-PHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
G P+R+ KN+ +CGDCH K+IS +V REI++RD++ FH F +G CSC+D W
Sbjct: 840 SNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 153/555 (27%), Positives = 254/555 (45%), Gaps = 62/555 (11%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVN 85
+AVHA ++ E + L N LI+ Y KL A V TVV++T+LI+G
Sbjct: 100 KAVHASFLKLREEK--TRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSR 157
Query: 86 NGRFVAALLHFVNMRR-DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
+ AL F MR+ VQPN++TF + A + G Q H L +K G + VF
Sbjct: 158 LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVF 217
Query: 145 VGCSAFDMYSKTGLRV--DARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLC 202
V S +Y K D +FDE+PQR++A+WN +S+ V++G+S A F E
Sbjct: 218 VSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNR 277
Query: 203 VHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGD-- 259
V G +S T L++C D L GR+LH IR G +++SV N LI FY K D
Sbjct: 278 VEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMK 337
Query: 260 -------------------IVSSEMVFSRIGR--------SRRNVVTWCSMLAALVQNHE 292
++++ M F + + +N +T+ +++A +N
Sbjct: 338 KVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGH 397
Query: 293 EERACLVFLQA-RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSA 351
+A +F ++ E TDF ++S + AC + ++ +H +K N + +A
Sbjct: 398 GLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTA 457
Query: 352 LVDLYGKCGSIENAEQVFSEMPQRNIVTWNA---MIGGYAHQGDVDMALGLFEEMTLGSC 408
L+D+ +C + +AE++F + P N+ + A +IGGYA G D A+ LF TL
Sbjct: 458 LLDMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAVSLFHR-TLCEQ 515
Query: 409 GIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYA------CVVDLLAR 462
+ V+L +L+ C G E G I Y ++ G +++ ++ + A+
Sbjct: 516 KLFLDEVSLTLILAVCGTLGFREMGYQI-----HCYALKAG--YFSDISLGNSLISMYAK 568
Query: 463 SGLVDRAYEFIQNMPIHPTISIWGALLGA--CRMHGKTKLGKVAAEKLFELDPEDSGNHV 520
D A + M H IS W +L+ + +G L + E+ P+ +
Sbjct: 569 CCDSDDAIKIFNTMREHDVIS-WNSLISCYILQRNGDEALALWSRMNEKEIKPD-----I 622
Query: 521 VLSNMLASAGRWEEA 535
+ ++ SA R+ E+
Sbjct: 623 ITLTLVISAFRYTES 637
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 306/599 (51%), Gaps = 11/599 (1%)
Query: 5 PPNL-LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQH 63
P N L L++ R G +H + + ++ + LI MY K + A
Sbjct: 58 PDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALR 117
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNM-RRDCVQPNDFTFPCVFKASSSLQ 122
+ +VTW+S+++G NG A+ F M V P+ T + A + L
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLS 177
Query: 123 MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYIS 182
G+ H ++ G D+ + S + Y+K+ +A N+F + ++++ +W+ I+
Sbjct: 178 NSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
VQ+G + +A+ F + + EPN T L ACA L GR+ H IR G
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-- 300
+V V+ L+D Y KC + VFSRI R++VV+W ++++ N R+ F
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRI--PRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 301 LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
+ P ++ VL +C+ELG LE + H+ +K D N F+G++LV+LY +CG
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCG 415
Query: 361 SIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
S+ NA +VF+ + ++ V W ++I GY G AL F M + S + P+ VT +S+
Sbjct: 416 SLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM-VKSSEVKPNEVTFLSI 474
Query: 421 LSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHP 480
LSACS AG + G+ IF+ M YR+ P EHYA +VDLL R G +D A E + MP P
Sbjct: 475 LSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSP 534
Query: 481 TISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
T I G LLGACR+H ++ + A+KLFEL+ +G ++++SN+ G WE +R
Sbjct: 535 TPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRN 594
Query: 541 EMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKL----REEMKKAGYF 595
+K GIKK + S I ++ +VH F A D H + + +L +L +E+++ YF
Sbjct: 595 SVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKEDLENCVYF 653
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 216/430 (50%), Gaps = 8/430 (1%)
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQA 130
R++ W +L+ ++ L HF +M RD +P++FT P KA L+ G+
Sbjct: 23 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 82
Query: 131 HALALKGGQI-YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR 189
H K + D++VG S MY K G ++A MFDE+ + ++ TW++ +S ++G
Sbjct: 83 HGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGS 142
Query: 190 SLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
AV F+ + P+ +T ++AC LGR +H F+IR G+ D+S+ N
Sbjct: 143 PYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVN 202
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE-A 307
L++ Y K + +F I + ++V++W +++A VQN A LVF +
Sbjct: 203 SLLNCYAKSRAFKEAVNLFKMI--AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 260
Query: 308 EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQ 367
EP + VL ACA LE GR H LA++ ++ + V +ALVD+Y KC S E A
Sbjct: 261 EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA 320
Query: 368 VFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRA 427
VFS +P++++V+W A+I G+ G ++ F M L + P + +V VL +CS
Sbjct: 321 VFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN-NTRPDAILMVKVLGSCSEL 379
Query: 428 GAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGA 487
G +E F S Y + A +V+L +R G + A + + + T+ +W +
Sbjct: 380 GFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTV-VWTS 437
Query: 488 LLGACRMHGK 497
L+ +HGK
Sbjct: 438 LITGYGIHGK 447
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 162/340 (47%), Gaps = 9/340 (2%)
Query: 160 VDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNAC 219
VDAR MF EM +R+L WN + + ++ + + + F +P++ T L AC
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 220 ADRLGLHLGRQLHAFIIRS-GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV 278
+ ++ G +H F+ + D+ V + LI Y KCG ++ + +F + + ++V
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL--EKPDIV 128
Query: 279 TWCSMLAALVQNHEEERACLVF--LQARKEAEPTDFMISSVLSACAELGGLELGRSVHAL 336
TW SM++ +N +A F + + P + +++SAC +L LGR VH
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 337 AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMA 396
++ ++ + ++L++ Y K + + A +F + ++++++W+ +I Y G A
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 397 LGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV 456
L +F +M G P+ T++ VL AC+ A +E G E + +E + +
Sbjct: 249 LLVFNDMM--DDGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIRKGLETEVKVSTAL 305
Query: 457 VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
VD+ + + AY +P +S W AL+ ++G
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVS-WVALISGFTLNG 344
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 302/556 (54%), Gaps = 15/556 (2%)
Query: 6 PNLLSSLLESAVSTRSPLLGRAVHAQIIRSH-ETPLPSFLCNHLINMYSKLDL-LNSAQH 63
P L +SLL++ S + G HA +++S ET + N L+++Y KL + +
Sbjct: 61 PKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN--VGNSLLSLYFKLGPGMRETRR 118
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQM 123
V ++ ++WTS+++G V V AL FV M + N+FT KA S L
Sbjct: 119 VFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGE 178
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISN 183
G+ H + + G ++ F+ + +Y VDAR +FDEMP+ ++ W A +S
Sbjct: 179 VRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSA 238
Query: 184 AVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
++ +A+G F G P+ TF L AC + L G+++H +I +G
Sbjct: 239 FSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGS 298
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
+V V + L+D YGKCG + + VF+ G S++N V+W ++L QN E E+A +F
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFN--GMSKKNSVSWSALLGGYCQNGEHEKAIEIF-- 354
Query: 303 ARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
+E E D + +VL ACA L + LG+ +H V+ N+ V SAL+DLYGK G
Sbjct: 355 --REMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGC 412
Query: 362 IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
I++A +V+S+M RN++TWNAM+ A G + A+ F +M GI P Y++ +++L
Sbjct: 413 IDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV--KKGIKPDYISFIAIL 470
Query: 422 SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPT 481
+AC G V+ G + F M + Y I+PG EHY+C++DLL R+GL + A ++
Sbjct: 471 TACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRND 530
Query: 482 ISIWGALLGACRMHGK-TKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
S+WG LLG C + +++ + A+++ EL+P+ ++V+LSNM + GR +A +RK
Sbjct: 531 ASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRK 590
Query: 541 EMKDIGIKKNVGYSWI 556
M G+ K VG SWI
Sbjct: 591 LMVRRGVAKTVGQSWI 606
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 126/308 (40%), Gaps = 45/308 (14%)
Query: 306 EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG-SIEN 364
E T + +S+L C ++ G HA VK+ ++ + VG++L+ LY K G +
Sbjct: 56 EIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRE 115
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
+VF ++ ++W +M+ GY + AL +F EM S G+ + TL S + AC
Sbjct: 116 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMV--SFGLDANEFTLSSAVKAC 173
Query: 425 SRAGAVESG--------MHIFE-------SMKEIYRI---------------EPGAEHYA 454
S G V G H FE ++ +Y + EP +
Sbjct: 174 SELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWT 233
Query: 455 CVVDLLARSGLVDRA----YEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE 510
V+ +++ L + A Y + + P S +G +L AC + K GK KL
Sbjct: 234 AVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL-- 291
Query: 511 LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDS 570
+ N VV S++L G+ R+ G+ K SW A+ ++
Sbjct: 292 ITNGIGSNVVVESSLLDMYGKCGSVREARQVFN--GMSKKNSVSWSALLGGY----CQNG 345
Query: 571 SHEKNSEI 578
HEK EI
Sbjct: 346 EHEKAIEI 353
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 297/573 (51%), Gaps = 16/573 (2%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVN 85
R + AQ++ H P+FL + +L N + + S+T ++ +I G N
Sbjct: 54 RQIQAQMLL-HSVEKPNFLIPKAV----ELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTN 108
Query: 86 N-GRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
AAL + M+ ++P+ FT+ VF A + L+ G+ H+ K G DV
Sbjct: 109 TWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVH 168
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
+ S MY+K G AR +FDE+ +R+ +WN+ IS + G + DA+ F++
Sbjct: 169 INHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEG 228
Query: 205 GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSE 264
EP+ T + L AC+ L GR L I + + LI YGKCGD+ S+
Sbjct: 229 FEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSAR 288
Query: 265 MVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAE 323
VF+++ + R V W +M+ QN + A +F + K P +S+VLSAC
Sbjct: 289 RVFNQMIKKDR--VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGS 346
Query: 324 LGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAM 383
+G LELG+ + A + + NI+V + LVD+YGKCG +E A +VF MP +N TWNAM
Sbjct: 347 VGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAM 406
Query: 384 IGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI 443
I YAHQG AL LF+ M+ + PS +T + VLSAC AG V G F M +
Sbjct: 407 ITAYAHQGHAKEALLLFDRMS-----VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSM 461
Query: 444 YRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKV 503
+ + P EHY ++DLL+R+G++D A+EF++ P P + A+LGAC + +
Sbjct: 462 FGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREK 521
Query: 504 AAEKLFEL-DPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRV 562
A L E+ + +++GN+V+ SN+LA W+E+ +R M+D G+ K G SWI ++ +
Sbjct: 522 AMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGEL 581
Query: 563 HVFQA-KDSSHEKNSEIQAMLAKLREEMKKAGY 594
F A D + ++ L EEMK+ Y
Sbjct: 582 MEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 614
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 317/591 (53%), Gaps = 20/591 (3%)
Query: 29 HAQIIRSHETPLPSF-------LCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIA 81
+A + S T P + L +LI Y + L+ A+ + R VV WT++I
Sbjct: 25 NAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMIT 84
Query: 82 GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIY 141
G ++ A F M + PN+FT V K+ ++++ G H + +K G
Sbjct: 85 GYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEG 144
Query: 142 DVFVGCSAFDMYSKTGLRVDARNM-FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEF 200
++V + +MY+ + ++A + F ++ +N TW I+ G + + +K+
Sbjct: 145 SLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM 204
Query: 201 LCVHGE--PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCG 258
L + E P IT +A D + G+Q+HA +I+ G++ ++ V N ++D Y +CG
Sbjct: 205 LLENAEVTPYCITIAVRASASID--SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG 262
Query: 259 DIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSV 317
+ ++ F + ++++TW ++++ L ++ E A L+F + + P + +S+
Sbjct: 263 YLSEAKHYFHEM--EDKDLITWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSL 319
Query: 318 LSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM-PQRN 376
++ACA + L G+ +H + ++N+ + +AL+D+Y KCG+I ++++VF E+ +RN
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 377 IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
+V+W +M+ GY G A+ LF++M S GI P + ++VLSAC AG VE G+
Sbjct: 380 LVSWTSMMIGYGSHGYGAEAVELFDKMV--SSGIRPDRIVFMAVLSACRHAGLVEKGLKY 437
Query: 437 FESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
F M+ Y I P + Y CVVDLL R+G + AYE ++ MP P S WGA+LGAC+ H
Sbjct: 438 FNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHK 497
Query: 497 KTKL-GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSW 555
L ++AA K+ EL P+ G +V+LS + A+ G+W + VRK M+ +G KK G SW
Sbjct: 498 HNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSW 557
Query: 556 IAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLE 606
I V+N+V F D S + ++L L EE ++AGY P+ + + D E
Sbjct: 558 ILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVNDQE 608
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 291/540 (53%), Gaps = 8/540 (1%)
Query: 150 FDMYSKTGLRVDARNMFDEMPQR-NLATWNAYISNAVQDGRSLDAVGAFKEFLCVH-GEP 207
F S TG A+ +FD + + WN I L+++ + L P
Sbjct: 46 FCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRP 105
Query: 208 NSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVF 267
+ TF L +C + ++H +IRSG+ +D VA L+ Y G + + VF
Sbjct: 106 DLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVF 165
Query: 268 SRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGG 326
+ R++V+W M+ +A ++ + E D + + ++LS+CA +
Sbjct: 166 DEM--PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSA 223
Query: 327 LELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGG 386
L +G +H +A + +FV +AL+D+Y KCGS+ENA VF+ M +R+++TWN+MI G
Sbjct: 224 LNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIG 283
Query: 387 YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRI 446
Y G A+ F +M + G+ P+ +T + +L CS G V+ G+ FE M + +
Sbjct: 284 YGVHGHGVEAISFFRKMV--ASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHL 341
Query: 447 EPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAE 506
P +HY C+VDL R+G ++ + E I H +W LLG+C++H +LG+VA +
Sbjct: 342 TPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMK 401
Query: 507 KLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQ 566
KL +L+ ++G++V+++++ ++A + +RK ++ ++ G+SWI + ++VH F
Sbjct: 402 KLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFV 461
Query: 567 AKDSSHEKNSEIQAMLAKLREEMKKAGYFP-DTNLSLFDLEDEEKASEVWYHSEKIALAF 625
D H +++ I + L ++ AGY P D+N + L D S HSEK+A+A+
Sbjct: 462 VDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAY 521
Query: 626 GLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
GL+ G +RITKNLR+C DCHS K++S+ REIIVRD RFH F DG CSC DYW
Sbjct: 522 GLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 205/477 (42%), Gaps = 32/477 (6%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHV-LSLTHLRT---VVTWTSLIA 81
R +H+ +I + PS NHL+ + + + S H L H + W LI
Sbjct: 22 RKIHSHVIINGLQHHPSIF-NHLLR-FCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIR 79
Query: 82 GCVNNGRFVAALLHFVNMRRDCV-QPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQI 140
G N+ + ++L + M V +P+ FTF K+ ++ + H ++ G +
Sbjct: 80 GFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFL 139
Query: 141 YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFK-- 198
D V S YS G A +FDEMP R+L +WN I G A+ +K
Sbjct: 140 DDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM 199
Query: 199 --EFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGK 256
E +C +S T A L++CA L++G LH V V+N LID Y K
Sbjct: 200 GNEGVC----GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAK 255
Query: 257 CGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL-VQNHEEERACLVFLQARKEAEPTDFMIS 315
CG + ++ VF+ G +R+V+TW SM+ V H E P
Sbjct: 256 CGSLENAIGVFN--GMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFL 313
Query: 316 SVLSACAELGGLELG-RSVHALAVKACVDENIFVGSALVDLYGKCGSIENA-EQVFSEMP 373
+L C+ G ++ G ++ + + N+ +VDLYG+ G +EN+ E +++
Sbjct: 314 GLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSC 373
Query: 374 QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG 433
+ V W ++G ++++ +++ A YV + S+ SA + A A
Sbjct: 374 HEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQA---- 429
Query: 434 MHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLG 490
F SM+++ R H V + + D+ ++F+ + +HP ++ + LG
Sbjct: 430 ---FASMRKLIR-----SHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELG 478
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/594 (31%), Positives = 304/594 (51%), Gaps = 22/594 (3%)
Query: 10 SSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLC--NHLINMYSKLDLLNSAQHVLSL 67
S+ L V + LLG + + +++ T L S L N I MYS+ A+ V
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVK---TGLESDLVVGNSFITMYSRSGSFRGARRVFDE 234
Query: 68 THLRTVVTWTSLIAGCVNNGRF-VAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
+ +++W SL++G G F A++ F +M R+ V+ + +F V
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
+Q H L +K G + VG YSK G+ +++F +M +RN+ +W IS+
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD 354
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
D AV F PN +TF +NA + G ++H I++G+ + SV
Sbjct: 355 D-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE 306
N I Y K + ++ F I + R +++W +M++ QN A +FL A E
Sbjct: 410 GNSFITLYAKFEALEDAKKAFEDI--TFREIISWNAMISGFAQNGFSHEALKMFLSAAAE 467
Query: 307 AEPTDFMISSVLSACA--ELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
P ++ SVL+A A E ++ G+ HA +K ++ V SAL+D+Y K G+I+
Sbjct: 468 TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
+E+VF+EM Q+N W ++I Y+ GD + + LF +M + +AP VT +SVL+AC
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKEN--VAPDLVTFLSVLTAC 585
Query: 425 SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
+R G V+ G IF M E+Y +EP EHY+C+VD+L R+G + A E + +P P S+
Sbjct: 586 NRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESM 645
Query: 485 WGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKD 544
++LG+CR+HG K+G AE E+ PE SG++V + N+ A W++A +RK M+
Sbjct: 646 LQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRK 705
Query: 545 IGIKKNVGYSWIAVKN-----RVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAG 593
+ K G+SWI V + + F + D SH K+ EI M+ + EM G
Sbjct: 706 KNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 173/373 (46%), Gaps = 18/373 (4%)
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
G Q H + G V V + MY K G +A +F+ + ++ +WN +S
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 154
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
+ +L+ V K V ++ T+ L+ C G LG QL + ++++G D+ V
Sbjct: 155 NQIALNFVVRMKSAGVVF---DAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVV 211
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHE-EERACLVFLQARK 305
N I Y + G + VF + S +++++W S+L+ L Q A ++F +
Sbjct: 212 GNSFITMYSRSGSFRGARRVFDEM--SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMR 269
Query: 306 EAEPTDFM-ISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
E D + +SV++ C L+L R +H L +K + + VG+ L+ Y KCG +E
Sbjct: 270 EGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEA 329
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
+ VF +M +RN+V+W MI + D A+ +F M G+ P+ VT V +++A
Sbjct: 330 VKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFD--GVYPNEVTFVGLINAV 382
Query: 425 SRAGAVESGMHIFE-SMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTIS 483
++ G+ I +K + EP + + L A+ ++ A + +++ IS
Sbjct: 383 KCNEQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFREIIS 440
Query: 484 IWGALLGACRMHG 496
W A++ +G
Sbjct: 441 -WNAMISGFAQNG 452
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 17/270 (6%)
Query: 162 ARNMFDEMPQRNLAT-WNAYISNAVQDGRSLDAVGAFKEFLCVH---GEPNSITFCAFLN 217
A +FD QRN T N IS +++ A+ FKE L + + +T C L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 218 ACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNV 277
AC R L G Q+H F SG+ V V+N ++ Y K G ++ +F + +V
Sbjct: 87 AC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL--VDPDV 142
Query: 278 VTWCSMLAALVQNHEEERACLVFLQARKEAEPT--DFMISSVLSACAELGGLELGRSVHA 335
V+W ++L+ N + L F+ K A F S+ LS C G LG + +
Sbjct: 143 VSWNTILSGFDDN----QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 336 LAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDM 395
VK ++ ++ VG++ + +Y + GS A +VF EM +++++WN+++ G + +G
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 258
Query: 396 -ALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
A+ +F +M G+ +V+ SV++ C
Sbjct: 259 EAVVIFRDMMRE--GVELDHVSFTSVITTC 286
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 295/552 (53%), Gaps = 10/552 (1%)
Query: 14 ESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTV 73
++A +S LG VH +I+RS ++ N L+ MY + A+ V + R V
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSW-FGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDV 183
Query: 74 VTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHAL 133
++W ++I+G NG AL+ F M + V + T + L+ G+ H L
Sbjct: 184 ISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL 243
Query: 134 ALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDA 193
+ + V + +MY K G +AR +FD M +R++ TW I+ +DG +A
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENA 303
Query: 194 VGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDF 253
+ + PN++T + ++ C D L ++ G+ LH + +R D+ + LI
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 254 YGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE-AEPTDF 312
Y KC + VFS G S+ + W +++A VQN A +F + R+E EP
Sbjct: 364 YAKCKRVDLCFRVFS--GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIA 421
Query: 313 MISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM 372
++S+L A A L L ++H K ++ + LV +Y KCG++E+A ++F+ +
Sbjct: 422 TLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGI 481
Query: 373 PQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
++ ++V W A+I GY GD AL +F EM G+ P+ +T S L+ACS +G
Sbjct: 482 QEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV--RSGVTPNEITFTSALNACSHSG 539
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGAL 488
VE G+ +F M E Y+ + HY C+VDLL R+G +D AY I +P PT ++WGAL
Sbjct: 540 LVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGAL 599
Query: 489 LGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIK 548
L AC H +LG++AA KLFEL+PE++GN+V+L+N+ A+ GRW++ VR M+++G++
Sbjct: 600 LAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLR 659
Query: 549 KNVGYSWIAVKN 560
K G+S I +++
Sbjct: 660 KKPGHSTIEIRS 671
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 226/496 (45%), Gaps = 21/496 (4%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL 70
SLL +T+S +A+H +I + + + L Y+ + A+ +
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGR--VSGHILSTLSVTYALCGHITYARKLFEEMPQ 77
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ--PNDFTFPCVFKASSSLQMPITGK 128
+++++ +I V G + A+ F+ M + V+ P+ +T+P V KA+ L+ G
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
H L+ D +V + MY G AR++FD M R++ +WN IS ++G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
DA+ F + + + T + L C L +GR +H + + + V N
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC-LVFLQARKEA 307
L++ Y KCG + + VF R+ RR+V+TW M+ ++ + E A L L +
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRM--ERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 308 EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQ 367
P I+S++S C + + G+ +H AV+ V +I + ++L+ +Y KC ++ +
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 368 VFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRA 427
VFS + + W+A+I G V ALGLF+ M + P+ TL S+L A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED--VEPNIATLNSLLPAYAAL 433
Query: 428 GAVESGMHIFESMKEIYRIEPG----AEHYACVVDLLARSGLVDRAYEF---IQNMPIHP 480
+ M+I Y + G + +V + ++ G ++ A++ IQ
Sbjct: 434 ADLRQAMNI-----HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSK 488
Query: 481 TISIWGALLGACRMHG 496
+ +WGAL+ MHG
Sbjct: 489 DVVLWGALISGYGMHG 504
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 197/623 (31%), Positives = 308/623 (49%), Gaps = 43/623 (6%)
Query: 10 SSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTH 69
+SLL + V R+ L G VHA I S S L L+ YS +L N AQ ++ +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISS-GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSD 105
Query: 70 LRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQ 129
+ + W LIA N F + + M ++P+ FT+P V KA G+
Sbjct: 106 ILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG- 188
H ++V + MY + AR +FD M +R+ +WNA I+ +G
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 189 -------------------------------RSLDAVGAFKEFLCVHGEPNSITFCAF-- 215
++ + VGA + P S+ A
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 216 -LNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR 274
L AC+ + LG+++H I S Y +V N LI Y KC D+ + +VF +
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQT--EE 343
Query: 275 RNVVTWCSMLAALVQ-NHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSV 333
++ TW S+++ Q N EE + L+ +P ++S+L CA + L+ G+
Sbjct: 344 NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Query: 334 HALAVK-ACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGD 392
H ++ C + + ++LVD+Y K G I A+QV M +R+ VT+ ++I GY +QG+
Sbjct: 404 HCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGE 463
Query: 393 VDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEH 452
+AL LF+EMT GI P +VT+V+VLSACS + V G +F M+ Y I P +H
Sbjct: 464 GGVALALFKEMT--RSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH 521
Query: 453 YACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELD 512
++C+VDL R+G + +A + I NMP P+ + W LL AC +HG T++GK AAEKL E+
Sbjct: 522 FSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMK 581
Query: 513 PEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSH 572
PE+ G +V+++NM A+AG W + VR M+D+G+KK+ G +WI + +F D+S
Sbjct: 582 PENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSS 641
Query: 573 EKNSEIQAMLAKLREEMK-KAGY 594
+ +L L + MK AGY
Sbjct: 642 PEACNTYPLLDGLNQLMKDNAGY 664
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
Query: 3 FHPPNL-LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA 61
F P ++ L+S+L + G+ H I+R + L N L+++Y+K + +A
Sbjct: 377 FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSL 121
+ V L R VT+TSLI G N G AL F M R ++P+ T V A S
Sbjct: 437 KQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHS 496
Query: 122 QMPITGKQAHALALKGGQIYDVFVGCSAF----DMYSKTGLRVDARNMFDEMPQR-NLAT 176
++ G++ L +K Y + F D+Y + G A+++ MP + + AT
Sbjct: 497 KLVHEGER---LFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGAT 553
Query: 177 W 177
W
Sbjct: 554 W 554
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 296/576 (51%), Gaps = 19/576 (3%)
Query: 23 LLGRAVHAQIIRSHETPLPSFLCN-----HLINMYSKLDLLNSAQHVLSLTHLRTVVTWT 77
LGR +H +++S ++C+ L+ MY+K +L ++ V R V +W
Sbjct: 124 FLGRMIHTLVVKS------GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWN 177
Query: 78 SLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKG 137
++I+ +G AL F M +PN + A S L GK+ H +K
Sbjct: 178 TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 138 GQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAF 197
G D +V + DMY K AR +F +MP+++L WN+ I V G S V
Sbjct: 238 GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEIL 297
Query: 198 KEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKC 257
+ P+ T + L AC+ L G+ +H ++IRS D+ V LID Y KC
Sbjct: 298 NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC 357
Query: 258 GDIVSSEMVFSRIGRSRRNVV-TWCSMLAALVQNHEEERACLVFLQ-ARKEAEPTDFMIS 315
G+ +E VFS+ ++++V +W M+++ + +A V+ Q +P +
Sbjct: 358 GEANLAETVFSK---TQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 316 SVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR 375
SVL AC++L LE G+ +H ++ ++ + + SAL+D+Y KCG+ + A ++F+ +P++
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 376 NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMH 435
++V+W MI Y G AL F+EM G+ P VTL++VLSAC AG ++ G+
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQ--KFGLKPDGVTLLAVLSACGHAGLIDEGLK 532
Query: 436 IFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP-IHPTISIWGALLGACRM 494
F M+ Y IEP EHY+C++D+L R+G + AYE IQ P + L AC +
Sbjct: 533 FFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCL 592
Query: 495 HGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
H + LG A L E P+D+ ++VL N+ AS W+ A VR +MK++G++K G S
Sbjct: 593 HLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCS 652
Query: 555 WIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK 590
WI + ++V F A+D SH + + LA L M+
Sbjct: 653 WIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 259/511 (50%), Gaps = 20/511 (3%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS 66
LLS L E ST+S + VH +I+ + LC LIN+Y SA+HV
Sbjct: 5 KLLSLLRECTNSTKSLRRIKLVHQRIL-TLGLRRDVVLCKSLINVYFTCKDHCSARHVFE 63
Query: 67 LTHLRT-VVTWTSLIAGCVNNGRFVAALLHFVNMRR--DCVQPNDFTFPCVFKASSSLQM 123
+R+ V W SL++G N F L F + CV P+ FTFP V KA +L
Sbjct: 64 NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICV-PDSFTFPNVIKAYGALGR 122
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISN 183
G+ H L +K G + DV V S MY+K L ++ +FDEMP+R++A+WN IS
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 184 AVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRED 243
Q G + A+ F EPNS++ ++AC+ L L G+++H ++ G+ D
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 244 VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQA 303
V + L+D YGKC + + VF ++ R+++V W SM+ V + ++C+ L
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKM--PRKSLVAWNSMIKGYVAKG-DSKSCVEILNR 299
Query: 304 R--KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
+ P+ ++S+L AC+ L G+ +H +++ V+ +I+V +L+DLY KCG
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 362 IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
AE VFS+ + +WN MI Y G+ A+ ++++M S G+ P VT SVL
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV--SVGVKPDVVTFTSVL 417
Query: 422 SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPT 481
ACS+ A+E G I S+ E R+E + ++D+ ++ G A+ ++P
Sbjct: 418 PACSQLAALEKGKQIHLSISE-SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV 476
Query: 482 ISIWGALLGACRMHGKTKLGKVAAEKLFELD 512
+S W ++ A HG+ + E L++ D
Sbjct: 477 VS-WTVMISAYGSHGQPR------EALYQFD 500
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 179/571 (31%), Positives = 316/571 (55%), Gaps = 10/571 (1%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
LG+ +HA +++S ++CN LI MY++ + A+ +L + VVTW SLI G
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
V N + AL F +M + ++ + + AS L + G + HA +K G ++
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
VG + DMYSK L F M ++L +W I+ Q+ ++A+ F++
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
E + + + L A + + + +++H I+R G + V + N L+D YGKC ++ +
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYA 540
Query: 264 EMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLSACA 322
VF I ++VV+W SM+++ N E A +F + + D + + +LSA A
Sbjct: 541 TRVFESI--KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598
Query: 323 ELGGLELGRSVHALAVKA--CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
L L GR +H ++ C++ +I V A+VD+Y CG +++A+ VF + ++ ++ +
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAV--AVVDMYACCGDLQSAKAVFDRIERKGLLQY 656
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
+MI Y G A+ LF++M + ++P +++ +++L ACS AG ++ G + M
Sbjct: 657 TSMINAYGMHGCGKAAVELFDKMRHEN--VSPDHISFLALLYACSHAGLLDEGRGFLKIM 714
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
+ Y +EP EHY C+VD+L R+ V A+EF++ M PT +W ALL ACR H + ++
Sbjct: 715 EHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEI 774
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKN 560
G++AA++L EL+P++ GN V++SN+ A GRW + VR +MK G++K+ G SWI +
Sbjct: 775 GEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDG 834
Query: 561 RVHVFQAKDSSHEKNSEIQAMLAKLREEMKK 591
+VH F A+D SH ++ EI L+++ ++++
Sbjct: 835 KVHKFTARDKSHPESKEIYEKLSEVTRKLER 865
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 202/419 (48%), Gaps = 15/419 (3%)
Query: 2 NFHPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA 61
N P + +LE R+ GR +H++I ++ + FL L+ MY K L+ A
Sbjct: 76 NNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDA 135
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSL 121
+ V RT W ++I V+NG +AL + NMR + V +FP + KA + L
Sbjct: 136 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 195
Query: 122 QMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLAT-WNAY 180
+ +G + H+L +K G F+ + MY+K AR +FD ++ A WN+
Sbjct: 196 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 255
Query: 181 ISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSG- 239
+S+ G+SL+ + F+E PNS T + L AC LG+++HA +++S
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 240 YREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLV 299
+ ++ V N LI Y +CG + +E + ++ + +VVTW S++ VQN + A
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNA--DVVTWNSLIKGYVQNLMYKEALEF 373
Query: 300 FLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGK 358
F +D ++S+++A L L G +HA +K D N+ VG+ L+D+Y K
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Query: 359 CGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLF----------EEMTLGS 407
C + F M +++++W +I GYA AL LF +EM LGS
Sbjct: 434 CNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGS 492
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 14/284 (4%)
Query: 212 FCAFLNACADRLGLHLGRQLHAFIIRS--GYREDVSVANGLIDFYGKCGDIVSSEMVFSR 269
F L C R + GRQLH+ I ++ + D +A L+ YGKCG + +E VF
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 270 IGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLSACAELGGLE 328
+ R W +M+ A V N E A ++ R E P ++L ACA+L +
Sbjct: 142 M--PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 329 LGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR-NIVTWNAMIGGY 387
G +H+L VK F+ +ALV +Y K + A ++F ++ + V WN+++ Y
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 388 AHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIE 447
+ G L LF EM + G AP+ T+VS L+AC + G I S+ +
Sbjct: 260 STSGKSLETLELFREMHM--TGPAPNSYTIVSALTACDGFSYAKLGKEIHASV--LKSST 315
Query: 448 PGAEHYAC--VVDLLARSGLVDRAYEFIQNMPIHPTISIWGALL 489
+E Y C ++ + R G + +A ++ M + + W +L+
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 13/309 (4%)
Query: 8 LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSL 67
+L S+L ++ +S L+ + +H I+R + L + + N L+++Y K + A V
Sbjct: 489 ILGSILRASSVLKSMLIVKEIHCHILR--KGLLDTVIQNELVDVYGKCRNMGYATRVFES 546
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITG 127
+ VV+WTS+I+ NG A+ F M + + C+ A++SL G
Sbjct: 547 IKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKG 606
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
++ H L+ G + + + DMY+ G A+ +FD + ++ L + + I+
Sbjct: 607 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 666
Query: 188 GRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQL-----HAFIIRSGYRE 242
G AV F + + P+ I+F A L AC+ L GR H + +
Sbjct: 667 GCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEH 726
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
V L+D G+ +V + F ++ ++ WC++LAA ++H E+ + Q
Sbjct: 727 YVC----LVDMLGRANCVVEA-FEFVKMMKTEPTAEVWCALLAA-CRSHSEKEIGEIAAQ 780
Query: 303 ARKEAEPTD 311
E EP +
Sbjct: 781 RLLELEPKN 789
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/550 (30%), Positives = 295/550 (53%), Gaps = 8/550 (1%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N ++N+Y K D + A+ + R +V+W ++I+G + G L MR D ++
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNM 165
P+ TF S ++ G+ H +K G D+ + + MY K G + +
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 166 FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
+ +P +++ W IS ++ GR+ A+ F E L + +S + + +CA
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 226 HLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLA 285
LG +H +++R GY D N LI Y KCG + S ++F R+ + R++V+W ++++
Sbjct: 363 DLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM--NERDLVSWNAIIS 420
Query: 286 ALVQNHEEERACLVFLQAR-KEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVD 343
QN + +A L+F + + K + D F + S+L AC+ G L +G+ +H + +++ +
Sbjct: 421 GYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIR 480
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM 403
V +ALVD+Y KCG +E A++ F + +++V+W +I GY G D+AL ++ E
Sbjct: 481 PCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEF 540
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
G+ P++V ++VLS+CS G V+ G+ IF SM + +EP EH ACVVDLL R+
Sbjct: 541 L--HSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRA 598
Query: 464 GLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLS 523
++ A++F + P+I + G +L ACR +GKT++ + E + EL P D+G++V L
Sbjct: 599 KRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLG 658
Query: 524 NMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLA 583
+ A+ RW++ + +M+ +G+KK G+S I + + F +SH ++ ++L
Sbjct: 659 HSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDT--VSLLK 716
Query: 584 KLREEMKKAG 593
L EM + G
Sbjct: 717 LLSREMMQFG 726
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 162/548 (29%), Positives = 271/548 (49%), Gaps = 22/548 (4%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL 70
SLL++ S + G ++H Q++ + + ++ + L+N+Y+K LL A+ V
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFSS-DFYISSSLVNLYAKFGLLAHARKVFEEMRE 109
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVN-MRRDCVQPNDFTFPCVFKASSSLQMPITGKQ 129
R VV WT++I GC + V VN MR ++P P S + IT Q
Sbjct: 110 RDVVHWTAMI-GCYSRAGIVGEACSLVNEMRFQGIKPG----PVTLLEMLSGVLEITQLQ 164
Query: 130 A-HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
H A+ G D+ V S ++Y K DA+++FD+M QR++ +WN IS G
Sbjct: 165 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
+ + P+ TF A L+ L +GR LH I+++G+ D+ +
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE-A 307
LI Y KCG +S V I ++VV W M++ L++ E+A +VF + + +
Sbjct: 285 ALITMYLKCGKEEASYRVLETI--PNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGS 342
Query: 308 EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQ 367
+ + I+SV+++CA+LG +LG SVH ++ + ++L+ +Y KCG ++ +
Sbjct: 343 DLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLV 402
Query: 368 VFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRA 427
+F M +R++V+WNA+I GYA D+ AL LFEEM + S+ T+VS+L ACS A
Sbjct: 403 IFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSF-TVVSLLQACSSA 461
Query: 428 GAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGA 487
GA+ G I + + I P + +VD+ ++ G ++ A ++ +S WG
Sbjct: 462 GALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGI 519
Query: 488 LLGACRMHGKTKLGKVAAEKLFE-LDPEDSGNHVVLSNMLASA---GRWEEATIVRKEM- 542
L+ HGK G +A E E L NHV+ +L+S G ++ + M
Sbjct: 520 LIAGYGFHGK---GDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMV 576
Query: 543 KDIGIKKN 550
+D G++ N
Sbjct: 577 RDFGVEPN 584
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 193/407 (47%), Gaps = 12/407 (2%)
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
++G L F +M + + P+ FTFP + KA +SLQ G H L G D +
Sbjct: 23 SHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFY 82
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
+ S ++Y+K GL AR +F+EM +R++ W A I + G +A E
Sbjct: 83 ISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQG 142
Query: 205 GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSE 264
+P +T L+ + L LH F + G+ D++V N +++ Y KC + ++
Sbjct: 143 IKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAK 199
Query: 265 MVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAE 323
+F ++ +R++V+W +M++ + + R + P + LS
Sbjct: 200 DLFDQM--EQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 324 LGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAM 383
+ LE+GR +H VK D ++ + +AL+ +Y KCG E + +V +P +++V W M
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM 317
Query: 384 IGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIF-ESMKE 442
I G G + AL +F EM G S + SV+++C++ G+ + G + ++
Sbjct: 318 ISGLMRLGRAEKALIVFSEML--QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 443 IYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALL 489
Y ++ A + ++ + A+ G +D++ + M +S W A++
Sbjct: 376 GYTLDTPALN--SLITMYAKCGHLDKSLVIFERMNERDLVS-WNAII 419
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 163/355 (45%), Gaps = 29/355 (8%)
Query: 177 WNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFII 236
+N++I++ G + F L P++ TF + L ACA L G +H ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERA 296
+G+ D +++ L++ Y K G + + VF + R+VV W +M+ + A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEM--RERDVVHWTAMIGCYSRAGIVGEA 131
Query: 297 CLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDL 355
C + + R + +P + +LS E+ L+ +H AV D +I V +++++L
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 356 YGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYV 415
Y KC + +A+ +F +M QR++V+WN MI GYA G++ L L M G+ P
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR--GDGLRPDQQ 246
Query: 416 TLVSVLSACSRAGAVESGMHIF-ESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQ 474
T + LS +E G + + +K + ++ + ++ + + G + +Y ++
Sbjct: 247 TFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLE 304
Query: 475 NMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASA 529
+P + + W ++ G +LG+ AEK +V S ML S
Sbjct: 305 TIP-NKDVVCWTVMIS-----GLMRLGR--AEKAL----------IVFSEMLQSG 341
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 2/230 (0%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
++S++ S S LG +VH ++R H L + N LI MY+K L+ + +
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPND-FTFPCVFKASSSLQMPITG 127
+ R +V+W ++I+G N ALL F M+ VQ D FT + +A SS G
Sbjct: 408 NERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
K H + ++ V + DMYSK G A+ FD + +++ +W I+
Sbjct: 468 KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFH 527
Query: 188 GRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIR 237
G+ A+ + EFL EPN + F A L++C+ + G ++ + ++R
Sbjct: 528 GKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 303/584 (51%), Gaps = 58/584 (9%)
Query: 65 LSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMP 124
+SL +++ + ++ + F L F +R + P++FT P V K+ L+
Sbjct: 3 MSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV 62
Query: 125 ITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNA 184
I G++ H A+K G +D +V S MY+ G +FDEMPQR++ +WN IS+
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 185 VQDGRSLDAVGAFKEFLCVHGEPN----SITFCAFLNACADRLGLHLGRQLHAFIIRSGY 240
V +GR DA+G FK + E N T + L+AC+ L +G +++ F++ + +
Sbjct: 123 VGNGRFEDAIGVFKR---MSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEF 178
Query: 241 REDVSVANGLIDFYGKCGDIVSSEMVFS---------------------RIGRSR----- 274
V + N L+D + KCG + + VF RI +R
Sbjct: 179 EMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER 238
Query: 275 ---RNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELG 330
++VV W +M+ VQ + + A +F + P +F++ S+L+ CA+ G LE G
Sbjct: 239 SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298
Query: 331 RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQ 390
+ +H + V + VG+ALVD+Y KCG IE A +VF E+ +R+ +W ++I G A
Sbjct: 299 KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMN 358
Query: 391 GDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGA 450
G AL L+ EM + G+ +T V+VL+AC+ G V G IF SM E + ++P +
Sbjct: 359 GMSGRALDLYYEME--NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKS 416
Query: 451 EHYACVVDLLARSGLVDRAYEFIQNM---PIHPTISIWGALLGACRMHGKTKLGKVAAEK 507
EH +C++DLL R+GL+D A E I M + ++ +LL A R +G K+ + AEK
Sbjct: 417 EHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEK 476
Query: 508 LFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQA 567
L +++ DS H +L+++ ASA RWE+ T VR++MKD+GI+K G S I + H F
Sbjct: 477 LEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIV 536
Query: 568 KDS--SHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEE 609
D SH K EI +ML + TNL + DLE +E
Sbjct: 537 GDDLLSHPKMDEINSMLHQ------------TTNL-MLDLEHKE 567
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 196/462 (42%), Gaps = 41/462 (8%)
Query: 3 FHPPNL-LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA 61
+P N L +L+S R + G VH +++ S++ N L+ MY+ L +
Sbjct: 42 LYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAG-LEFDSYVSNSLMGMYASLGKIEIT 100
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQPNDFTFPCVFKASSS 120
V R VV+W LI+ V NGRF A+ F M ++ ++ ++ T A S+
Sbjct: 101 HKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSA 160
Query: 121 LQMPITGKQAHALALK--------GGQIYDVFVGCSAFDM-------------------- 152
L+ G++ + + G + D+F C D
Sbjct: 161 LKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV 220
Query: 153 --YSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSI 210
Y TG +AR +F+ P +++ W A ++ VQ R +A+ F+ P++
Sbjct: 221 FGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNF 280
Query: 211 TFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI 270
+ L CA L G+ +H +I + D V L+D Y KCG I ++ VF I
Sbjct: 281 VLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI 340
Query: 271 GRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGGLEL 329
R+ +W S++ L N RA ++ + D +VL+AC G +
Sbjct: 341 --KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAE 398
Query: 330 GRSV-HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRN----IVTWNAMI 384
GR + H++ + V S L+DL + G ++ AE++ +M + + + +++
Sbjct: 399 GRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLL 458
Query: 385 GGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
+ G+V +A + E++ + ++ L SV ++ +R
Sbjct: 459 SAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANR 500
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 285/571 (49%), Gaps = 14/571 (2%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
LG +H ++ + + FL N LI+MYSK L+ A + R V+W SLI+G
Sbjct: 166 LGELLHGLVVVNGLSQ-QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGY 224
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA---SSSLQMPITGKQAHALALKGGQI 140
V G L M RD + + V KA + + G H K G
Sbjct: 225 VRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGME 284
Query: 141 YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVG--AFK 198
+D+ V + DMY+K G +A +F MP +N+ T+NA IS +Q D AFK
Sbjct: 285 FDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFK 344
Query: 199 EFLCVHG---EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYG 255
F+ + EP+ TF L AC+ L GRQ+HA I ++ ++ D + + LI+ Y
Sbjct: 345 LFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYA 404
Query: 256 KCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQA-RKEAEPTDFMI 314
G F+ S++++ +W SM+ VQN + E A +F Q P ++ +
Sbjct: 405 LMGSTEDGMQCFA--STSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTV 462
Query: 315 SSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ 374
S ++SACA+ L G + A+K+ +D V ++ + +Y K G++ A QVF E+
Sbjct: 463 SLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQN 522
Query: 375 RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGM 434
++ T++AMI A G + AL +FE M + GI P+ + VL AC G V G+
Sbjct: 523 PDVATYSAMISSLAQHGSANEALNIFESMK--THGIKPNQQAFLGVLIACCHGGLVTQGL 580
Query: 435 HIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRM 494
F+ MK YRI P +H+ C+VDLL R+G + A I + W ALL +CR+
Sbjct: 581 KYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRV 640
Query: 495 HGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
+ + +GK AE+L EL+PE SG++V+L N+ +G A VR+ M+D G+KK S
Sbjct: 641 YKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALS 700
Query: 555 WIAVKNRVHVFQAKDSSHEKNSEIQAMLAKL 585
WI + N+ H F D SH + I ML +
Sbjct: 701 WIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 238/504 (47%), Gaps = 36/504 (7%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
L ++A + S +LG+ H +I+S P L N+L+NMY K L A+ + R
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLL-NNLLNMYCKCRELGFARQLFDRMPER 111
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAH 131
++++ SLI+G G + A+ F+ R ++ + FT+ G+ H
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLH 171
Query: 132 ALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSL 191
L + G VF+ DMYSK G A ++FD +R+ +WN+ IS V+ G +
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAE 231
Query: 192 DAVGAFKEFLCVHGEPNSITFCAF---LNACADRLG---LHLGRQLHAFIIRSGYREDVS 245
+ + + +H + ++T A L AC L + G +H + + G D+
Sbjct: 232 EPLNLLAK---MHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIV 288
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHE------EERACLV 299
V L+D Y K G + + +FS + +NVVT+ +M++ +Q E E L
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLM--PSKNVVTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 300 FLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
R+ EP+ S VL AC+ LE GR +HAL K + F+GSAL++LY
Sbjct: 347 MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
GS E+ Q F+ +++I +W +MI + ++ A LF + L S I P T+
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ--LFSSHIRPEEYTVSL 464
Query: 420 VLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV----VDLLARSG---LVDRAYEF 472
++SAC+ A+ SG I + Y I+ G + + V + + A+SG L ++ +
Sbjct: 465 MMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 473 IQNMPIHPTISIWGALLGACRMHG 496
+QN P ++ + A++ + HG
Sbjct: 520 VQN----PDVATYSAMISSLAQHG 539
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 168/335 (50%), Gaps = 13/335 (3%)
Query: 111 FPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP 170
+ +F+ ++ + GK AH +K +++ + +MY K AR +FD MP
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 171 QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQ 230
+RN+ ++N+ IS Q G A+ F E + + + T+ L C +R L LG
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 231 LHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQ- 289
LH ++ +G + V + N LID Y KCG + + +F R R+ V+W S+++ V+
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC--DERDQVSWNSLISGYVRV 227
Query: 290 NHEEERACLVFLQARKEAEPTDFMISSVLSACA---ELGGLELGRSVHALAVKACVDENI 346
EE L+ R T + + SVL AC G +E G ++H K ++ +I
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDV-----DMALGLFE 401
V +AL+D+Y K GS++ A ++FS MP +N+VT+NAMI G+ ++ A LF
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF- 346
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
M + G+ PS T VL ACS A +E G I
Sbjct: 347 -MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 291/582 (50%), Gaps = 28/582 (4%)
Query: 28 VHAQIIRSHETPLPS--FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVN 85
VHA +I+S P S F+ ++M+ K + ++ A V R TW ++++G
Sbjct: 74 VHAHLIKS---PFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQ 130
Query: 86 NGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFV 145
+G A F MR + + P+ T + +++S + + HA+ ++ G V V
Sbjct: 131 SGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTV 190
Query: 146 GCSAFDMYSKTGLRVDARNMFDEMPQ--RNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
+ Y K G A+ +F+ + + R + +WN+ G + DA G + L
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
+P+ TF +C + L GR +H+ I G +D+ N I Y K D S+
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 264 EMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLSACA 322
++F + + R V+W M++ + + + A +F K E D + + S++S C
Sbjct: 311 RLLFDIM--TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 323 ELGGLELGRSVHALA-VKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWN 381
+ G LE G+ + A A + C +N+ + +AL+D+Y KCGSI A +F P++ +VTW
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWT 428
Query: 382 AMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMK 441
MI GYA G AL LF +M P+++T ++VL AC+ +G++E G F MK
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMI--DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Query: 442 EIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLG 501
++Y I PG +HY+C+VDLL R G ++ A E I+NM P IWGALL AC++H K+
Sbjct: 487 QVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIA 546
Query: 502 KVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNR 561
+ AAE LF L+P+ + +V ++N+ A+AG W+ +R MK IKK G S I V +
Sbjct: 547 EQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGK 606
Query: 562 VHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLF 603
H F + H +N I YF LSLF
Sbjct: 607 NHSFTVGEHGHVENEVI---------------YFTLNGLSLF 633
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 232/494 (46%), Gaps = 37/494 (7%)
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
++ L +V W I VN V +LL F M+R +PN+FTFP V KA + L
Sbjct: 11 ISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGC 70
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
+ HA +K DVFVG + DM+ K A +F+ MP+R+ TWNA +S Q
Sbjct: 71 CEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQ 130
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
G + A F+E P+S+T + + + L L +HA IR G V+V
Sbjct: 131 SGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTV 190
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARK 305
AN I YGKCGD+ S+++VF I R R VV+W SM A E A ++ L R+
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 306 EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENA 365
E +P ++ ++C L GR +H+ A+ D++I + + +Y K +A
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 366 EQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
+F M R V+W MI GYA +GD+D AL LF M G P VTL+S++S C
Sbjct: 311 RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI--KSGEKPDLVTLLSLISGCG 368
Query: 426 RAGAVESGMHIFESMKEIYRIEPGAEHYAC----------VVDLLARSGLVDRAYEFIQN 475
+ G++E+G I+ A+ Y C ++D+ ++ G + A + N
Sbjct: 369 KFGSLETGKW----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN 418
Query: 476 MPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE--LDPEDSGNHVVLSNMLASAGR-- 531
P T+ W ++ ++G + A KLF +D + NH+ +L +
Sbjct: 419 TP-EKTVVTWTTMIAGYALNGIF----LEALKLFSKMIDLDYKPNHITFLAVLQACAHSG 473
Query: 532 -----WEEATIVRK 540
WE I+++
Sbjct: 474 SLEKGWEYFHIMKQ 487
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 195/650 (30%), Positives = 306/650 (47%), Gaps = 78/650 (12%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHV---LSLTHLRTVVTWTSLIAG 82
R VHAQ++ S L +LI++Y++L LL A++V +SL L + W S++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 83 CVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYD 142
V++G + AL + MR+ + + + P + +A L + H ++ G +
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKEN 192
Query: 143 VFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLC 202
+ V +Y K G DA N+F EMP RN +WN I Q+ AV F+
Sbjct: 193 LHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQR 252
Query: 203 VHGEPNSITFCA-----------------------------------FLNACADRLGLHL 227
+P+ +T+ + F + CA+ L +
Sbjct: 253 EEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSI 312
Query: 228 GRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS-------------- 273
++H ++I+ G+ E + N LI YGK G + +E +F +I
Sbjct: 313 AEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVD 372
Query: 274 -----------------------RRNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEP 309
+ NVVTW S++ + + F Q + +
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Query: 310 TDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVF 369
I +LS CAEL L LGR +H ++ + ENI V +ALV++Y KCG + VF
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 370 SEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGA 429
+ +++++WN++I GY G + AL +F+ M S G P + LV+VLSACS AG
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMI--SSGFHPDGIALVAVLSACSHAGL 550
Query: 430 VESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALL 489
VE G IF SM + + +EP EHYAC+VDLL R G + A E ++NMP+ P + + GALL
Sbjct: 551 VEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALL 610
Query: 490 GACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKK 549
+CRMH + + A +L L+PE +G++++LSN+ ++ GRWEE+ VR K +KK
Sbjct: 611 NSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKK 670
Query: 550 NVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTN 599
G SWI VK + + F + + I +L L M K G D N
Sbjct: 671 VSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGN 720
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 10/240 (4%)
Query: 24 LGRAVHAQIIRSHETPLPSFL----CNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSL 79
L R + + I S + + SF+ + ++++S+L+ +N +V + VVTWTS+
Sbjct: 351 LFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKA-----NVVTWTSV 405
Query: 80 IAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQ 139
I GC GR +L +F M+ V N T C+ + L G++ H ++
Sbjct: 406 IKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSM 465
Query: 140 IYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKE 199
++ V + +MY+K GL + +F+ + ++L +WN+ I G + A+ F
Sbjct: 466 SENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDR 525
Query: 200 FLCVHGEPNSITFCAFLNACADRLGLHLGRQL-HAFIIRSGYREDVSVANGLIDFYGKCG 258
+ P+ I A L+AC+ + GR++ ++ R G ++D G+ G
Sbjct: 526 MISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVG 585
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 306/616 (49%), Gaps = 38/616 (6%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLD-LLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
+ +H+Q I P P+F + S+L ++ A + VV W ++I G
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT-GKQAHALALKGGQIYDV 143
+ ++NM ++ V P+ TFP + + GK+ H +K G ++
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNL 170
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
+V + MYS GL AR +FD + ++ +WN IS + +++ E
Sbjct: 171 YVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERN 230
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
P S+T L+AC+ L +++H ++ + + N L++ Y CG++ +
Sbjct: 231 LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIA 290
Query: 264 EMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF----------------------- 300
+F + R+V++W S++ V+ + A F
Sbjct: 291 VRIFRSM--KARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 348
Query: 301 ----LQARKEAE-----PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSA 351
L+ +E + P +F + SVL+ACA LG LE+G + K + ++ VG+A
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNA 408
Query: 352 LVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIA 411
L+D+Y KCG E A++VF +M QR+ TW AM+ G A+ G A+ +F +M I
Sbjct: 409 LIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQ--DMSIQ 466
Query: 412 PSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYE 471
P +T + VLSAC+ +G V+ F M+ +RIEP HY C+VD+L R+GLV AYE
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 472 FIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGR 531
++ MP++P +WGALLGA R+H + ++AA+K+ EL+P++ + +L N+ A R
Sbjct: 527 ILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKR 586
Query: 532 WEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKK 591
W++ VR+++ D+ IKK G+S I V H F A D SH ++ EI L +L +E
Sbjct: 587 WKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTF 646
Query: 592 AGYFPDTNLSLFDLED 607
A Y PDT+ LF+ D
Sbjct: 647 AAYLPDTSELLFEAGD 662
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/567 (32%), Positives = 297/567 (52%), Gaps = 14/567 (2%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
+ R+VH QI R L LCN L+ MYSK L S++ + + V+WT++I+
Sbjct: 220 IARSVHGQITRKM-FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISS- 277
Query: 84 VNNGRFV-AALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKG--GQI 140
N G F AL F M + ++PN T V + + + GK H A++
Sbjct: 278 YNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPN 337
Query: 141 YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEF 200
Y+ + + ++Y++ G D + + RN+ WN+ IS G + A+G F++
Sbjct: 338 YES-LSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 201 LCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDI 260
+ +P++ T + ++AC + + LG+Q+H +IR+ ++ V N LID Y K G +
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSV 455
Query: 261 VSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTDFMISSVLS 319
S+ VF++I R+VVTW SML QN A +F E + +V+
Sbjct: 456 DSASTVFNQI--KHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQ 513
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVT 379
AC+ +G LE G+ VH + + + +++F +AL+D+Y KCG + AE VF M R+IV+
Sbjct: 514 ACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVS 572
Query: 380 WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFES 439
W++MI Y G + A+ F +M G P+ V ++VLSAC +G+VE G + F
Sbjct: 573 WSSMINAYGMHGRIGSAISTFNQMV--ESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNL 630
Query: 440 MKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
MK + + P +EH+AC +DLL+RSG + AY I+ MP S+WG+L+ CR+H K
Sbjct: 631 MKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMD 689
Query: 500 LGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVK 559
+ K L ++ +D+G + +LSN+ A G WEE +R MK +KK GYS I +
Sbjct: 690 IIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEID 749
Query: 560 NRVHVFQAKDSSHEKNSEIQAMLAKLR 586
+V F A + + + EI L L+
Sbjct: 750 QKVFRFGAGEENRIQTDEIYRFLGNLQ 776
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 245/490 (50%), Gaps = 22/490 (4%)
Query: 28 VHAQII---RSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
+HA ++ R PLP LI Y+ + +S++ V + LI V
Sbjct: 20 LHAHLLVTGRLRRDPLP---VTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNV 76
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA-SSSLQMPITGKQAHALALKGGQIYDV 143
AA+ + + + Q + F FP V +A + S + G + H +KGG D
Sbjct: 77 WCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDA 136
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
+ S MY +TG DA +FD MP R+L W+ +S+ +++G + A+ FK +
Sbjct: 137 VIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDD 196
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
EP+++T + + CA+ L + R +H I R + D ++ N L+ Y KCGD++SS
Sbjct: 197 GVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSS 256
Query: 264 EMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACA 322
E +F +I +++N V+W +M+++ + E+A F + K EP + SVLS+C
Sbjct: 257 ERIFEKI--AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 323 ELGGLELGRSVHALAVKACVDENI-FVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWN 381
+G + G+SVH AV+ +D N + ALV+LY +CG + + E V + RNIV WN
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 382 AMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMK 441
++I YAH+G V ALGLF +M + I P TL S +SAC AG V G I
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMV--TQRIKPDAFTLASSISACENAGLVPLGKQIH---G 429
Query: 442 EIYRIEPGAEHYA-CVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
+ R + E ++D+ ++SG VD A + N H ++ W ++L +G +
Sbjct: 430 HVIRTDVSDEFVQNSLIDMYSKSGSVDSA-STVFNQIKHRSVVTWNSMLCGFSQNGNS-- 486
Query: 501 GKVAAEKLFE 510
V A LF+
Sbjct: 487 --VEAISLFD 494
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 271/554 (48%), Gaps = 27/554 (4%)
Query: 8 LLSSLLESAVSTRSPL-LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS 66
+ S+L + +R L +G VH +II+ + + L+ MY + L+ A+ V
Sbjct: 102 VFPSVLRACAGSREHLSVGGKVHGRIIKGGVDD-DAVIETSLLCMYGQTGNLSDAEKVFD 160
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
+R +V W++L++ C+ NG V AL F M D V+P+ T V + + L
Sbjct: 161 GMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRI 220
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
+ H + D + S MYSK G + + +F+++ ++N +W A IS+ +
Sbjct: 221 ARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDV-S 245
S A+ +F E + EPN +T + L++C + G+ +H F +R + S
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES 340
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ-AR 304
++ L++ Y +CG + E V + S RN+V W S+++ +A +F Q
Sbjct: 341 LSLALVELYAECGKLSDCETVLRVV--SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398
Query: 305 KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
+ +P F ++S +SAC G + LG+ +H ++ V + FV ++L+D+Y K GS+++
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDS 457
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
A VF+++ R++VTWN+M+ G++ G+ A+ LF+ M + + VT ++V+ AC
Sbjct: 458 ASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY--HSYLEMNEVTFLAVIQAC 515
Query: 425 SRAGAVESG--MH---IFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH 479
S G++E G +H I +K+++ ++D+ A+ G ++ A + M
Sbjct: 516 SSIGSLEKGKWVHHKLIISGLKDLFT-------DTALIDMYAKCGDLNAAETVFRAMSSR 568
Query: 480 PTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLAS---AGRWEEAT 536
+S +++ A MHG+ ++ E + N VV N+L++ +G EE
Sbjct: 569 SIVSW-SSMINAYGMHGRIGSAISTFNQMVESGTKP--NEVVFMNVLSACGHSGSVEEGK 625
Query: 537 IVRKEMKDIGIKKN 550
MK G+ N
Sbjct: 626 YYFNLMKSFGVSPN 639
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 296 bits (758), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 189/591 (31%), Positives = 304/591 (51%), Gaps = 13/591 (2%)
Query: 6 PN--LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQH 63
PN +SL++ L+G ++++QII+ + + ++ MYS L SA+
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSD-NVVVQTSVLGMYSSCGDLESARR 255
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQM 123
+ + R V W ++I G + N + L+ F NM V P FT+ V S L
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISN 183
GK HA + + D+ + + DMY G +A +F + NL +WN+ IS
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 184 AVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
++G A+ ++ L + P+ TF A ++A A+ G+ LH + + GY
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYER 435
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
V V L+ Y K + S++ VF + R+VV W M+ + E A F++
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVFDVM--KERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 303 ARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
+E +D F +SSV+ AC+++ L G H LA++ D + V ALVD+YGK G
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 362 IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
E AE +FS ++ WN+M+G Y+ G V+ AL FE++ G P VT +S+L
Sbjct: 554 YETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL--ENGFMPDAVTYLSLL 611
Query: 422 SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFI-QNMPIHP 480
+ACS G+ G ++ MKE I+ G +HY+C+V+L++++GLVD A E I Q+ P +
Sbjct: 612 AACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNN 670
Query: 481 TISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
+W LL AC ++G AAE++ +LDPED+ H++LSN+ A GRWE+ +R+
Sbjct: 671 QAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRR 730
Query: 541 EMKDIGIKKNVGYSWIAV-KNRVHVFQAKDSSH-EKNSEIQAMLAKLREEM 589
+++ + K+ G SWI V N VF + D S+ E S+ Q L +L+ M
Sbjct: 731 KIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQDELNRLKRNM 781
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 153/567 (26%), Positives = 262/567 (46%), Gaps = 38/567 (6%)
Query: 3 FHPPNLLSS----LLESAVSTRSPLLGRAVHAQIIRS-----HETPLPSFLCNHLINMYS 53
F P N ++S L VS R +HA ++ + E+P + N+LI+MY
Sbjct: 87 FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESP---YANNNLISMYV 143
Query: 54 KLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVA-ALLHFVNMRRDCVQPNDFTFP 112
+ L A+ V R VV++ +L + N F + A +M + V+PN TF
Sbjct: 144 RCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFT 203
Query: 113 CVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQR 172
+ + + L+ + G ++ +K G +V V S MYS G AR +FD + R
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLH 232
+ WN I ++++ + D + F+ L +P T+ LN C+ LG+ +H
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 233 AFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHE 292
A II S D+ + N L+D Y CGD+ + VF RI N+V+W S+++ +N
Sbjct: 324 ARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP--NLVSWNSIISGCSENGF 381
Query: 293 EERACLVF--LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGS 350
E+A L++ L P ++ S+ +SA AE G+ +H K + ++FVG+
Sbjct: 382 GEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGT 441
Query: 351 ALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGI 410
L+ +Y K E+A++VF M +R++V W MI G++ G+ ++A+ F EM
Sbjct: 442 TLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN-- 499
Query: 411 APSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV-------VDLLARS 463
+L SV+ ACS + G E++ + CV VD+ ++
Sbjct: 500 RSDGFSLSSVIGACSDMAMLRQG--------EVFHCLAIRTGFDCVMSVCGALVDMYGKN 551
Query: 464 GLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE--LDPEDSGNHVV 521
G + A E I ++ +P + W ++LGA HG + E++ E P D+ ++
Sbjct: 552 GKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMP-DAVTYLS 609
Query: 522 LSNMLASAGRWEEATIVRKEMKDIGIK 548
L + G + + +MK+ GIK
Sbjct: 610 LLAACSHRGSTLQGKFLWNQMKEQGIK 636
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 37/381 (9%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTW-------------TSLIAGCVNNGRFVAA 92
N+LI+MY + L A+ V R +VT +SL + + G F
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF--Q 83
Query: 93 LLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALK---GGQIYDVFVGCSA 149
++ F+ + + T CV S+ + +Q HAL L G + +
Sbjct: 84 MIFFMPLNEIASSVVELTRKCV-----SITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 150 FDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLD-AVGAFKEFLCVHG--- 205
MY + G AR +FD+MP RN+ ++NA S R+ D A AF L H
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAY---SRNPDFASYAFP--LTTHMAFE 193
Query: 206 --EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
+PNS TF + + CA + +G L++ II+ GY ++V V ++ Y CGD+ S+
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 264 EMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACA 322
+F + + R+ V W +M+ ++N + E + F +PT F S VL+ C+
Sbjct: 254 RRIFDCV--NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCS 311
Query: 323 ELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNA 382
+LG LG+ +HA + + ++ + +AL+D+Y CG + A VF + N+V+WN+
Sbjct: 312 KLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNS 371
Query: 383 MIGGYAHQGDVDMALGLFEEM 403
+I G + G + A+ ++ +
Sbjct: 372 IISGCSENGFGEQAMLMYRRL 392
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 182/413 (44%), Gaps = 19/413 (4%)
Query: 152 MYSKTGLRVDARNMFDEMPQRNLATWNA------YISNAVQDGRSLDAVGAFKEFLCVHG 205
MY + AR +FD+MPQRN+ T Y+S + +G+F+ +
Sbjct: 31 MYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPL 90
Query: 206 EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSG---YREDVSVANGLIDFYGKCGDIVS 262
+ + C L RQ+HA ++ +G E N LI Y +CG +
Sbjct: 91 NEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQ 150
Query: 263 SEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC--LVFLQARKEAEPTDFMISSVLSA 320
+ VF ++ RNVV++ ++ +A +N + L A + +P +S++
Sbjct: 151 ARKVFDKM--PHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQV 208
Query: 321 CAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
CA L + +G S+++ +K +N+ V ++++ +Y CG +E+A ++F + R+ V W
Sbjct: 209 CAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAW 268
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
N MI G ++ L F M + G+ P+ T VL+ CS+ G+ G I +
Sbjct: 269 NTMIVGSLKNDKIEDGLMFFRNMLMS--GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARI 326
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
+ A ++D+ G + A+ ++ +P + W +++ C +G +
Sbjct: 327 IVSDSLADLPLDNA-LLDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGCSENGFGEQ 384
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASA--GRWEEATIVRKEMKDIGIKKNV 551
+ +L + + + + A+A R+ ++ ++ +G +++V
Sbjct: 385 AMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSV 437
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 295/589 (50%), Gaps = 12/589 (2%)
Query: 13 LESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRT 72
L+ + + G+ +H ++R L+NMY+K L+ A V + R
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-RD 125
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA 132
V + +LI+G V NG + A+ + MR + + P+ +TFP + K S ++++ K+ H
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHG 184
Query: 133 LALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLAT-WNAYISNAVQDGRSL 191
LA K G D +VG YSK DA+ +FDE+P R+ + WNA ++ Q R
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 192 DAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLI 251
DA+ F + + T + L+A + GR +H +++G D+ V+N LI
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 252 DFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPT 310
D YGK + + +F + R++ TW S+L + + +F + P
Sbjct: 305 DMYGKSKWLEEANSIFEAM--DERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 311 DFMISSVLSACAELGGLELGRSVHALAVKACV----DENIFVGSALVDLYGKCGSIENAE 366
+++VL C L L GR +H + + + N F+ ++L+D+Y KCG + +A
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 367 QVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
VF M ++ +WN MI GY Q ++AL +F M G+ P +T V +L ACS
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMC--RAGVKPDEITFVGLLQACSH 480
Query: 427 AGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWG 486
+G + G + M+ +Y I P ++HYACV+D+L R+ ++ AYE + PI +W
Sbjct: 481 SGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWR 540
Query: 487 ALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIG 546
++L +CR+HG L VA ++L EL+PE G +V++SN+ AG++EE VR M+
Sbjct: 541 SILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQN 600
Query: 547 IKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYF 595
+KK G SWI +KN VH F + +H + I L+ + M Y
Sbjct: 601 VKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYM 649
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 122/234 (52%), Gaps = 13/234 (5%)
Query: 208 NSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVA-NGLIDFYGKCGDIVSSEMV 266
N T A L CA R G+Q+H F++R G+ +D A L++ Y KCG + + +V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVL--SACAE 323
F G S R+V + ++++ V N A + + R P + S+L S E
Sbjct: 119 F---GGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME 175
Query: 324 LGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR-NIVTWNA 382
L + + VH LA K D + +VGS LV Y K S+E+A++VF E+P R + V WNA
Sbjct: 176 LSDV---KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNA 232
Query: 383 MIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
++ GY+ + AL +F +M G+ S T+ SVLSA + +G +++G I
Sbjct: 233 LVNGYSQIFRFEDALLVFSKMR--EEGVGVSRHTITSVLSAFTVSGDIDNGRSI 284
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 285/556 (51%), Gaps = 39/556 (7%)
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNM-RRDCVQ--PNDFTFPCVFKASSSLQMPITGK 128
+ +W I G + + L + M R C + P+ FT+P +FK + L++ G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 129 Q--AHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
H L L+ + V ++ M++ G +AR +FDE P R+L +WN I+ +
Sbjct: 177 MILGHVLKLRLELVSHVH--NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
G + A+ +K +P+ +T +++C+ L+ G++ + ++ +G R + +
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRI-------------GRSR----------------RNV 277
N L+D + KCGDI + +F + G +R ++V
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 278 VTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHAL 336
V W +M+ VQ + A +F + + +P + + LSAC++LG L++G +H
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 337 AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMA 396
K + N+ +G++LVD+Y KCG+I A VF + RN +T+ A+IGG A GD A
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 397 LGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV 456
+ F EM GIAP +T + +LSAC G +++G F MK + + P +HY+ +
Sbjct: 475 ISYFNEMI--DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 457 VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDS 516
VDLL R+GL++ A +++MP+ ++WGALL CRMHG +LG+ AA+KL ELDP DS
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 592
Query: 517 GNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNS 576
G +V+L M A WE+A R+ M + G++K G S I V V F +D S ++
Sbjct: 593 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 652
Query: 577 EIQAMLAKLREEMKKA 592
+I L L M+ +
Sbjct: 653 KIYDRLHCLGRHMRSS 668
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 189/420 (45%), Gaps = 39/420 (9%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
L + R LG + +++ L S + N I+M++ + +A+ V + +R
Sbjct: 162 LFKVCADLRLSSLGHMILGHVLKL-RLELVSHVHNASIHMFASCGDMENARKVFDESPVR 220
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAH 131
+V+W LI G G A+ + M + V+P+D T + + S L GK+ +
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 132 ALALKGG---------QIYDVFVGCS-------AFDM---------------YSKTGLRV 160
+ G + D+F C FD Y++ GL
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 161 DARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
+R +FD+M ++++ WNA I +VQ R DA+ F+E + +P+ IT L+AC+
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 221 DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTW 280
L +G +H +I + +V++ L+D Y KCG+I + VF G RN +T+
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFH--GIQTRNSLTY 458
Query: 281 CSMLAALVQNHEEERACLVFLQARKEA--EPTDFMISSVLSACAELGGLELGRSVHA-LA 337
+++ L H + + + +A P + +LSAC G ++ GR + +
Sbjct: 459 TAIIGGLAL-HGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Query: 338 VKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMA 396
+ ++ + S +VDL G+ G +E A+++ MP + + W A++ G G+V++
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 192/639 (30%), Positives = 308/639 (48%), Gaps = 77/639 (12%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
GR VH +++S F+ + L +MY K +L+ A V R V W +L+ G
Sbjct: 191 FGRGVHGYVVKSGLEDC-VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGY 249
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
V NG+ A+ F +MR+ V+P T AS+++ GKQ+HA+A+ G D
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
+G S + Y K GL A +FD M ++++ TWN IS VQ G DA+ +
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQL------HAF----------------------- 234
+ + +T ++A A L LG+++ H+F
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 235 --IIRSGYREDVSVANGLIDFYGKCG-------------------DIVSSEMVFSRIGRS 273
+ S +D+ + N L+ Y + G ++++ ++ + R+
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 274 RR------------------NVVTWCSMLAALVQNHEEERACLVFLQARKEA--EPTDFM 313
+ N+++W +M+ +VQN E A L FL+ +E+ P F
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAIL-FLRKMQESGLRPNAFS 548
Query: 314 ISSVLSACAELGGLELGRSVHALAVKACVDENIF-VGSALVDLYGKCGSIENAEQVFSEM 372
I+ LSACA L L +GR++H ++ ++ + ++LVD+Y KCG I AE+VF
Sbjct: 549 ITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSK 608
Query: 373 PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVES 432
+ NAMI YA G++ A+ L+ +L G+ P +T+ +VLSAC+ AG +
Sbjct: 609 LYSELPLSNAMISAYALYGNLKEAIALYR--SLEGVGLKPDNITITNVLSACNHAGDINQ 666
Query: 433 GMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGAC 492
+ IF + ++P EHY +VDLLA +G ++A I+ MP P + +L+ +C
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASC 726
Query: 493 RMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVG 552
KT+L + KL E +PE+SGN+V +SN A G W+E +R+ MK G+KK G
Sbjct: 727 NKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 786
Query: 553 YSWIAVKNR--VHVFQAKDSSHEKNSEIQAMLAKLREEM 589
SWI + VHVF A D +H + +EIQ MLA L +M
Sbjct: 787 CSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/503 (29%), Positives = 249/503 (49%), Gaps = 10/503 (1%)
Query: 6 PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHE-TPLPSFLCNHLINMYSKLDLLNSAQHV 64
P + +L+ V R G+ +HA+I+++ + ++ L+ Y+K D L A+ +
Sbjct: 70 PEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVL 129
Query: 65 LSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMP 124
S +R V +W ++I G AL+ FV M + + P++F P V KA +L+
Sbjct: 130 FSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWS 189
Query: 125 ITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNA 184
G+ H +K G VFV S DMY K G+ DA +FDE+P RN WNA +
Sbjct: 190 RFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGY 249
Query: 185 VQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDV 244
VQ+G++ +A+ F + EP +T L+A A+ G+ G+Q HA I +G D
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309
Query: 245 SVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR 304
+ L++FY K G I +EMVF R+ ++VVTW +++ VQ E A + R
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRM--FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 305 KEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
E D +++++SA A L+LG+ V ++ + +I + S ++D+Y KCGSI
Sbjct: 368 LEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 364 NAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
+A++VF +++++ WN ++ YA G AL LF M L G+ P+ +T ++ +
Sbjct: 428 DAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE--GVPPNVITWNLIILS 485
Query: 424 CSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP---IHP 480
R G V+ +F M+ I P + +++ + ++G + A F++ M + P
Sbjct: 486 LLRNGQVDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRP 544
Query: 481 TISIWGALLGACRMHGKTKLGKV 503
L AC +G+
Sbjct: 545 NAFSITVALSACAHLASLHIGRT 567
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/590 (31%), Positives = 306/590 (51%), Gaps = 15/590 (2%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRS-HETPLPSFLCNHLINMYSKLDLLNSAQHVLSL 67
S LL+ S + LG VH +I+ +E + ++ + L++MY+K + + A
Sbjct: 104 FSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV--YVGSSLVDMYAKCERVEDAFEAFKE 161
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAA--LLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPI 125
V+W +LIAG V A LL + M+ V + TF +
Sbjct: 162 ISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA-AVTMDAGTFAPLLTLLDDPMFCN 220
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP-QRNLATWNAYISNA 184
KQ HA LK G +++ + + Y+ G DA+ +FD + ++L +WN+ I+
Sbjct: 221 LLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGF 280
Query: 185 VQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDV 244
+ A F + E + T+ L+AC+ G+ LH +I+ G +
Sbjct: 281 SKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVT 340
Query: 245 SVANGLIDFYGK--CGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
S N LI Y + G + + +F + +++++W S++ Q E A F
Sbjct: 341 SATNALISMYIQFPTGTMEDALSLFESL--KSKDLISWNSIITGFAQKGLSEDAVKFFSY 398
Query: 303 ARK-EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
R E + D+ S++L +C++L L+LG+ +HALA K+ N FV S+L+ +Y KCG
Sbjct: 399 LRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGI 458
Query: 362 IENAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
IE+A + F ++ + + V WNAMI GYA G ++L LF +M + + +VT ++
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMC--NQNVKLDHVTFTAI 516
Query: 421 LSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHP 480
L+ACS G ++ G+ + M+ +Y+I+P EHYA VDLL R+GLV++A E I++MP++P
Sbjct: 517 LTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNP 576
Query: 481 TISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
+ LG CR G+ ++ A L E++PED +V LS+M + +WEE V+K
Sbjct: 577 DPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKK 636
Query: 541 EMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK 590
MK+ G+KK G+SWI ++N+V F A+D S+ +I M+ L +EM+
Sbjct: 637 MMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 246/492 (50%), Gaps = 14/492 (2%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD 102
++ N +++ Y K L A + R V+W ++I+G + G+ A F M+R
Sbjct: 36 YVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRS 95
Query: 103 CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDA 162
+ ++F + K +S++ G+Q H L +KGG +V+VG S DMY+K DA
Sbjct: 96 GSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDA 155
Query: 163 RNMFDEMPQRNLATWNAYISNAVQ--DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
F E+ + N +WNA I+ VQ D ++ + E + ++ TF L
Sbjct: 156 FEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME-MKAAVTMDAGTFAPLLTLLD 214
Query: 221 DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTW 280
D + +L +Q+HA +++ G + ++++ N +I Y CG + ++ VF +G S +++++W
Sbjct: 215 DPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGS-KDLISW 273
Query: 281 CSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVK 339
SM+A ++ +E A +F+Q ++ TD + + +LSAC+ G+S+H + +K
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK 333
Query: 340 ACVDENIFVGSALVDLYGK--CGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMAL 397
+++ +AL+ +Y + G++E+A +F + +++++WN++I G+A +G + A+
Sbjct: 334 KGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAV 393
Query: 398 GLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVV 457
F L S I ++L +CS ++ G I ++ + ++
Sbjct: 394 KFFS--YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HALATKSGFVSNEFVISSLI 450
Query: 458 DLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSG 517
+ ++ G+++ A + Q + + W A++ HG LG+V+ + ++ ++
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG---LGQVSLDLFSQMCNQNVK 507
Query: 518 -NHVVLSNMLAS 528
+HV + +L +
Sbjct: 508 LDHVTFTAILTA 519
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 142/299 (47%), Gaps = 7/299 (2%)
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR 189
H A+K G I D++V D Y K G A +FDEMP+R+ +WN IS G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
DA F + + +F L A LG Q+H +I+ GY +V V +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERA-CLVFLQARKEAE 308
L+D Y KC + + F I S N V+W +++A VQ + + A L+ L K A
Sbjct: 142 LVDMYAKCERVEDAFEAFKEI--SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 309 PTDF-MISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQ 367
D + +L+ + L + VHA +K + I + +A++ Y CGS+ +A++
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 368 VFSEM-PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
VF + +++++WN+MI G++ + A LF +M + T +LSACS
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ--RHWVETDIYTYTGLLSACS 316
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/569 (32%), Positives = 298/569 (52%), Gaps = 22/569 (3%)
Query: 26 RAVHAQIIRS--HETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
+ +HAQIIR HE + LI+ S N A V + V SLI
Sbjct: 36 KQLHAQIIRRNLHED---LHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAH 92
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
N + A F M+R + ++FT+P + KA S K H K G D+
Sbjct: 93 AQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDI 152
Query: 144 FVGCSAFDMYSKTG-LRV-DARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
+V + D YS+ G L V DA +F++M +R+ +WN+ + V+ G DA F E
Sbjct: 153 YVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM- 211
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQL-HAFIIRSGYREDVSVA-NGLIDFYGKCGD 259
+ + I++ L+ G R++ AF + E +V+ + ++ Y K GD
Sbjct: 212 ---PQRDLISWNTMLD------GYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGD 262
Query: 260 IVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVL 318
+ + ++F ++ +NVVTW ++A + + A + Q D + S+L
Sbjct: 263 MEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISIL 322
Query: 319 SACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIV 378
+AC E G L LG +H++ ++ + N +V +AL+D+Y KCG+++ A VF+++P++++V
Sbjct: 323 AACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV 382
Query: 379 TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFE 438
+WN M+ G G A+ LF M GI P VT ++VL +C+ AG ++ G+ F
Sbjct: 383 SWNTMLHGLGVHGHGKEAIELFSRMR--REGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 439 SMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKT 498
SM+++Y + P EHY C+VDLL R G + A + +Q MP+ P + IWGALLGACRMH +
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 499 KLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAV 558
+ K + L +LDP D GN+ +LSN+ A+A WE +R +MK +G++K G S + +
Sbjct: 501 DIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Query: 559 KNRVHVFQAKDSSHEKNSEIQAMLAKLRE 587
++ +H F D SH K+ +I ML L E
Sbjct: 561 EDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 185/600 (30%), Positives = 301/600 (50%), Gaps = 52/600 (8%)
Query: 1 MNFHPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNS 60
++ PPNL + + + +P L + A +I++ L N I + L+
Sbjct: 769 LSLAPPNLKKIIKQCS----TPKLLESALAAMIKTSLNQ-DCRLMNQFITACTSFKRLDL 823
Query: 61 AQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSS 120
A ++ V + +L G V + +L +V M RD V P+ +T+ + KASS
Sbjct: 824 AVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF 883
Query: 121 LQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAY 180
QAH G + V + + D YS TG +AR +FDEMP+R+ W
Sbjct: 884 ASRFGESLQAHIWKFGFG--FHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTM 941
Query: 181 ISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY 240
+S R LD A N+ A+++
Sbjct: 942 VSAY---RRVLDMDSA--------------------NSLANQMS---------------- 962
Query: 241 REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF 300
++ + +N LI+ Y G++ +E +F+++ +++++W +M+ QN A VF
Sbjct: 963 EKNEATSNCLINGYMGLGNLEQAESLFNQM--PVKDIISWTTMIKGYSQNKRYREAIAVF 1020
Query: 301 LQARKEAE-PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
+ +E P + +S+V+SACA LG LE+G+ VH ++ ++++GSALVD+Y KC
Sbjct: 1021 YKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC 1080
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
GS+E A VF +P++N+ WN++I G A G AL +F +M + S + P+ VT VS
Sbjct: 1081 GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMES--VKPNAVTFVS 1138
Query: 420 VLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH 479
V +AC+ AG V+ G I+ SM + Y I EHY +V L +++GL+ A E I NM
Sbjct: 1139 VFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE 1198
Query: 480 PTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVR 539
P IWGALL CR+H + ++A KL L+P +SG + +L +M A RW + +R
Sbjct: 1199 PNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIR 1258
Query: 540 KEMKDIGIKKNV-GYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDT 598
M+++GI+K G S I + R H+F A D SH + E+ +L ++ ++M AGY +T
Sbjct: 1259 GRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQET 1318
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 285 bits (730), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 261/477 (54%), Gaps = 44/477 (9%)
Query: 140 IYDVFVGCSAFDMYSKTGLRVD-ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFK 198
++++ CS D VD A ++F + N+ + A I V GRS D V +
Sbjct: 64 VFELIRVCSTLD-------SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYH 116
Query: 199 EFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCG 258
+ P++ + L AC L + R++HA +++ G+ SV +++ YGK G
Sbjct: 117 RMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSG 172
Query: 259 DIVSSEMVFSRIGRSR-----------------------------RNVVTWCSMLAALVQ 289
++V+++ +F + ++ V W +M+ LV+
Sbjct: 173 ELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVR 232
Query: 290 NHEEERACLVFLQARKE-AEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFV 348
N E +A +F + + E +F VLSAC++LG LELGR VH+ ++ + FV
Sbjct: 233 NKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFV 292
Query: 349 GSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSC 408
G+AL+++Y +CG I A +VF M ++++++N MI G A G A+ F +M +
Sbjct: 293 GNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV--NR 350
Query: 409 GIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDR 468
G P+ VTLV++L+ACS G ++ G+ +F SMK ++ +EP EHY C+VDLL R G ++
Sbjct: 351 GFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEE 410
Query: 469 AYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLAS 528
AY FI+N+PI P + G LL AC++HG +LG+ A++LFE + DSG +V+LSN+ AS
Sbjct: 411 AYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYAS 470
Query: 529 AGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKL 585
+G+W+E+T +R+ M+D GI+K G S I V N++H F D +H I L +L
Sbjct: 471 SGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 206/484 (42%), Gaps = 80/484 (16%)
Query: 27 AVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNN 86
++HA+IIR+ +F+ LI + S LD ++ A V S V +T++I G V++
Sbjct: 47 SIHAKIIRTFHDQ-DAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSS 105
Query: 87 GRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVG 146
GR + + M + V P+++ V KA L++ ++ HA LK G VG
Sbjct: 106 GRSADGVSLYHRMIHNSVLPDNYVITSVLKACD-LKV---CREIHAQVLKLGFGSSRSVG 161
Query: 147 CSAFDMYSKTGLRVDARNMFDEMPQRN-------------------------------LA 175
++Y K+G V+A+ MFDEMP R+
Sbjct: 162 LKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV 221
Query: 176 TWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFI 235
W A I V++ A+ F+E + N T L+AC+D L LGR +H+F+
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 236 IRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEER 295
V N LI+ Y +CGDI + VF R+ R ++V+++ +M++ L +
Sbjct: 282 ENQRMELSNFVGNALINMYSRCGDINEARRVF-RVMRD-KDVISYNTMISGLAMHGASVE 339
Query: 296 ACLVFLQ-ARKEAEPTDFMISSVLSACAELGGLELGRSV-HALAVKACVDENIFVGSALV 353
A F + P + ++L+AC+ G L++G V +++ V+ I +V
Sbjct: 340 AINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIV 399
Query: 354 DLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPS 413
DL G+ G +E A + +P I P
Sbjct: 400 DLLGRVGRLEEAYRFIENIP------------------------------------IEPD 423
Query: 414 YVTLVSVLSACSRAGAVESGMHIFESMKEIYRIE-PGAEHYACVVDLLARSGLVDRAYEF 472
++ L ++LSAC G +E G I K ++ E P + Y + +L A SG + E
Sbjct: 424 HIMLGTLLSACKIHGNMELGEKI---AKRLFESENPDSGTYVLLSNLYASSGKWKESTEI 480
Query: 473 IQNM 476
++M
Sbjct: 481 RESM 484
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 274/531 (51%), Gaps = 10/531 (1%)
Query: 28 VHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVL-SLTHLRTVVTWTSLIAGCVNN 86
VHA + +S L S + LI+MYSK ++ ++ V L ++ +I +
Sbjct: 373 VHAWVFKSG-FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQS 431
Query: 87 GRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVG 146
+ A+ F M ++ ++ ++F+ + L + GKQ H LK G + D+ VG
Sbjct: 432 KKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQVHGYTLKSGLVLDLTVG 488
Query: 147 CSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE 206
S F +YSK G ++ +F +P ++ A W + IS + G +A+G F E L
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTS 548
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
P+ T A L C+ L G+++H + +R+G + + + + L++ Y KCG + + V
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELG 325
+ R+ + V+ S+++ Q+ + L+F D F ISS+L A A
Sbjct: 609 YDRL--PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSD 666
Query: 326 GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIG 385
LG VHA K + VGS+L+ +Y K GSI++ + FS++ +++ W A+I
Sbjct: 667 ESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIA 726
Query: 386 GYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYR 445
YA G + AL ++ M G P VT V VLSACS G VE SM + Y
Sbjct: 727 SYAQHGKANEALQVYNLMK--EKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYG 784
Query: 446 IEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAA 505
IEP HY C+VD L RSG + A FI NM I P +WG LL AC++HG+ +LGKVAA
Sbjct: 785 IEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAA 844
Query: 506 EKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWI 556
+K EL+P D+G ++ LSN+LA G W+E RK MK G++K G+S +
Sbjct: 845 KKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 226/462 (48%), Gaps = 24/462 (5%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
LI+++SK A V + V W ++IAG + N + A F M +P+
Sbjct: 191 LIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPD 250
Query: 108 DFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFD 167
+T+ V A +SL+ GK A +K G DVFV + D+Y+K G +A +F
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 168 EMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHL 227
+P ++ +W +S + + A+ FKE E N+ T + ++AC +
Sbjct: 310 RIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCE 369
Query: 228 GRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR-SRRNVVTWCSMLAA 286
Q+HA++ +SG+ D SVA LI Y K GDI SE VF + R+N+V M+ +
Sbjct: 370 ASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITS 427
Query: 287 LVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDEN 345
Q+ + +A +F + +E TD F + S+LS L L LG+ VH +K+ + +
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLD 484
Query: 346 IFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
+ VGS+L LY KCGS+E + ++F +P ++ W +MI G+ G + A+GLF EM
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML- 543
Query: 406 GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIY------RIEPGAEHYACVVDL 459
G +P TL +VL+ CS ++ G KEI+ I+ G + + +V++
Sbjct: 544 -DDGTSPDESTLAAVLTVCSSHPSLPRG-------KEIHGYTLRAGIDKGMDLGSALVNM 595
Query: 460 LARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLG 501
++ G + A + +P +S +L+ HG + G
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSC-SSLISGYSQHGLIQDG 636
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 215/477 (45%), Gaps = 20/477 (4%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVN 85
+ + A ++R + P FL L++ YS + A + VV+ +I+G
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 86 NGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFV 145
+ F +L F M + N+ ++ V A S+LQ P+ + +K G + V
Sbjct: 128 HRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVV 187
Query: 146 GCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG 205
+ D++SK DA +F + N+ WN I+ A+++ F E
Sbjct: 188 ESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ 247
Query: 206 EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEM 265
+P+S T+ + L ACA L G+ + A +I+ G EDV V ++D Y KCG + +
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAME 306
Query: 266 VFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAEL 324
VFSRI +VV+W ML+ ++++ A +F + R E + ++SV+SAC
Sbjct: 307 VFSRI--PNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 325 GGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM---PQRNIVTWN 381
+ VHA K+ + V +AL+ +Y K G I+ +EQVF ++ ++NIV N
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--N 422
Query: 382 AMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA--CSRAGAVESGMHIFES 439
MI ++ A+ LF M G+ ++ S+LS C G G +
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQE--GLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSG 480
Query: 440 MKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
+ + + G+ + L ++ G ++ +Y+ Q +P + W +++ +G
Sbjct: 481 L--VLDLTVGSSLFT----LYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYG 530
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 283/557 (50%), Gaps = 13/557 (2%)
Query: 5 PPNLLSSLLESAVSTRSPLLGRAVHAQII---RSHETPLPSFLCNHLINMYSKLDLLNSA 61
P N +LL ++ + VHA++I E L S L N I ++LD S+
Sbjct: 3 PVNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQ-SNRLDFATSS 61
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGR--FVAALLHFVNMRRDCVQPNDFTFPCVFKASS 119
+ + R +W ++++G + + LL + MRR C + F KA
Sbjct: 62 FNRIPCWK-RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACV 120
Query: 120 SLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNA 179
L + G H LA+K G D +V S +MY++ G A+ +FDE+P RN W
Sbjct: 121 GLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGV 180
Query: 180 YISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSG 239
+ ++ + + F +++T + AC + +G+ +H IR
Sbjct: 181 LMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRS 240
Query: 240 YREDVS-VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACL 298
+ + + +ID Y KC + ++ +F RNVV W ++++ + A
Sbjct: 241 FIDQSDYLQASIIDMYVKCRLLDNARKLFET--SVDRNVVMWTTLISGFAKCERAVEAFD 298
Query: 299 VFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYG 357
+F Q +E+ P ++++L +C+ LG L G+SVH ++ ++ + ++ +D+Y
Sbjct: 299 LFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYA 358
Query: 358 KCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTL 417
+CG+I+ A VF MP+RN+++W++MI + G + AL F +M S + P+ VT
Sbjct: 359 RCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMK--SQNVVPNSVTF 416
Query: 418 VSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP 477
VS+LSACS +G V+ G FESM Y + P EHYAC+VDLL R+G + A FI NMP
Sbjct: 417 VSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMP 476
Query: 478 IHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATI 537
+ P S WGALL ACR+H + L AEKL ++PE S +V+LSN+ A AG WE
Sbjct: 477 VKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNC 536
Query: 538 VRKEMKDIGIKKNVGYS 554
VR++M G +K+VG S
Sbjct: 537 VRRKMGIKGYRKHVGQS 553
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 249/457 (54%), Gaps = 13/457 (2%)
Query: 105 QPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARN 164
P+ FTFP VFKA GKQ H + K G D++V S Y G +A
Sbjct: 103 SPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACK 162
Query: 165 MFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG 224
+F EMP R++ +W I+ + G +A+ F + + EPN T+ L + R+G
Sbjct: 163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSK---MDVEPNLATYVCVL-VSSGRVG 218
Query: 225 -LHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
L LG+ +H I++ + N LID Y KC + + VF + +++ V+W SM
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGEL--EKKDKVSWNSM 276
Query: 284 LAALVQNHEEERACLVF--LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
++ LV + A +F +Q +P +++SVLSACA LG ++ GR VH + A
Sbjct: 277 ISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG 336
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
+ + +G+A+VD+Y KCG IE A ++F+ + +N+ TWNA++GG A G +L FE
Sbjct: 337 IKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFE 396
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI-YRIEPGAEHYACVVDLL 460
EM G P+ VT ++ L+AC G V+ G F MK Y + P EHY C++DLL
Sbjct: 397 EMV--KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLL 454
Query: 461 ARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGK-TKLGKVAAEKLFELDPEDSGNH 519
R+GL+D A E ++ MP+ P + I GA+L AC+ G +L K + +++ EDSG +
Sbjct: 455 CRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVY 514
Query: 520 VVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWI 556
V+LSN+ A+ RW++ +R+ MK GI K G S+I
Sbjct: 515 VLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 24 LGRAVHAQIIR-----SHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTS 78
LG+ +H I++ S ET N LI+MY K + L+ A V + V+W S
Sbjct: 222 LGKGIHGLILKRASLISLETG------NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNS 275
Query: 79 LIAGCVNNGRFVAALLHFVNMRRDC-VQPNDFTFPCVFKASSSLQMPITGKQAHALALKG 137
+I+G V+ R A+ F M+ ++P+ V A +SL G+ H L
Sbjct: 276 MISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA 335
Query: 138 GQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAF 197
G +D +G + DMY+K G A +F+ + +N+ TWNA + G L+++ F
Sbjct: 336 GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYF 395
Query: 198 KEFLCVHGEPNSITFCAFLNAC 219
+E + + +PN +TF A LNAC
Sbjct: 396 EEMVKLGFKPNLVTFLAALNAC 417
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/573 (32%), Positives = 288/573 (50%), Gaps = 71/573 (12%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHF--VNMRRDC 103
N +++ ++K L+ A+ + + + VVT SL+ G + NG AL F +N D
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADA 187
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTG-LRV-- 160
+ T V KA + L+ GKQ HA L GG D + S ++Y+K G LR+
Sbjct: 188 I-----TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 161 ----------------------------DARNMFDEMPQRNLATWNAYISNAVQDGRSLD 192
++R +FD R + WN+ IS + + ++
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 193 AVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLID 252
A+ F E + +S T A +NAC L G+Q+H + G +D+ VA+ L+D
Sbjct: 303 ALVLFNE-MRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLD 361
Query: 253 FYGKCGDIVSSEMVFS---------------------RIGRSRR--------NVVTWCSM 283
Y KCG + + +FS RI ++R ++++W SM
Sbjct: 362 MYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSM 421
Query: 284 LAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACV 342
QN F Q K PTD +SSV+SACA + LELG V A A +
Sbjct: 422 TNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGL 481
Query: 343 DENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEE 402
D + V S+L+DLY KCG +E+ +VF M + + V WN+MI GYA G A+ LF++
Sbjct: 482 DSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK 541
Query: 403 MTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLAR 462
M++ GI P+ +T + VL+AC+ G VE G +FESMK + P EH++C+VDLLAR
Sbjct: 542 MSVA--GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLAR 599
Query: 463 SGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVL 522
+G V+ A ++ MP S+W ++L C +G +GK AAEK+ EL+PE+S +V L
Sbjct: 600 AGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQL 659
Query: 523 SNMLASAGRWEEATIVRKEMKDIGIKKNVGYSW 555
S + A++G WE + +VRK M++ + KN G SW
Sbjct: 660 SAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 136/589 (23%), Positives = 224/589 (38%), Gaps = 167/589 (28%)
Query: 114 VFKASSSLQMPITGKQAHALALKGGQIYD-VFVGCSAFDMYSKTGLRVDARNMFDEMPQR 172
+ ++ SS +Q + L LK G + V V MYS++G ARN+FDEMP R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAF------------LNACA 220
N +WN I + G ++ F G ++ F NA
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 221 DRLGLHLGRQLHAFIIRSGYRE-------------------------------------- 242
++ + L LH +I+ +GY E
Sbjct: 152 EKDVVTLNSLLHGYIL-NGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIH 210
Query: 243 ----------DVSVANGLIDFYGKCGDIVSSEMVFSRI------------------GR-- 272
D + + L++ Y KCGD+ + + +I GR
Sbjct: 211 AQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVN 270
Query: 273 ---------SRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAE 323
S R V+ W SM++ + N+ + A ++F + R E +++V++AC
Sbjct: 271 ESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIG 330
Query: 324 LGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS---------------------- 361
LG LE G+ +H A K + ++I V S L+D+Y KCGS
Sbjct: 331 LGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSM 390
Query: 362 ---------IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAP 412
I++A++VF + +++++WN+M G++ G L F +M +
Sbjct: 391 IKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH--KLDLPT 448
Query: 413 SYVTLVSVLSACSRAGAVESGMHIF---------------ESMKEIYRIEPGAEHYACVV 457
V+L SV+SAC+ ++E G +F S+ ++Y EH V
Sbjct: 449 DEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVF 508
Query: 458 DLLARSGLVD---------------RAYEFIQNMP---IHPTISIWGALLGACRMHGKTK 499
D + +S V A + + M I PT + +L AC G +
Sbjct: 509 DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVE 568
Query: 500 LGKVAAEKLFELDPEDSG------NHVVLSNMLASAGRWEEATIVRKEM 542
G+ KLFE D G + + ++LA AG EEA + +EM
Sbjct: 569 EGR----KLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM 613
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 17/287 (5%)
Query: 10 SSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTH 69
S+LL+ SP+ + +++ S++T L N +I +Y ++ A+ V
Sbjct: 357 STLLDMYSKCGSPMEACKLFSEV-ESYDT----ILLNSMIKVYFSCGRIDDAKRVFERIE 411
Query: 70 LRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQ 129
+++++W S+ G NG V L +F M + + ++ + V A +S+ G+Q
Sbjct: 412 NKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQ 471
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR 189
A A G D V S D+Y K G R +FD M + + WN+ IS +G+
Sbjct: 472 VFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQ 531
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQL-HAFIIRSGYREDVSVAN 248
+A+ FK+ P ITF L AC + GR+L + + G+ D +
Sbjct: 532 GFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFS 591
Query: 249 GLIDFYGKCGDI-----VSSEMVFSRIGRSRRNVVTWCSMLAALVQN 290
++D + G + + EM F G W S+L V N
Sbjct: 592 CMVDLLARAGYVEEAINLVEEMPFDVDGS------MWSSILRGCVAN 632
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 300 FLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVK-ACVDENIFVGSALVDLYGK 358
FLQA E + + + +L +C+ L R + L +K + + V + L+ +Y +
Sbjct: 17 FLQA-MEVDCRRYYVR-LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSR 74
Query: 359 CGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLV 418
G + A +F EMP RN +WN MI GY + G+ +L F+ M +
Sbjct: 75 SGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMP------ERDGYSWN 128
Query: 419 SVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPI 478
V+S ++AG + +F +M E + + + +++ G + A + +
Sbjct: 129 VVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN-----GYAEEALRLFKELNF 183
Query: 479 HPTISIWGALLGACRMHGKTKLGK-VAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATI 537
+L AC K GK + A+ L DS + L N+ A G A+
Sbjct: 184 SADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASY 243
Query: 538 VRKEMKD 544
+ +++++
Sbjct: 244 MLEQIRE 250
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 277/548 (50%), Gaps = 45/548 (8%)
Query: 45 CNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC- 103
C+ +++ Y K+ + A+ + R V+TWT++I G G F F+ MR++
Sbjct: 211 CSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDAR 163
V+ N T +FKA G Q H L + +D+F+G S MYSK G +A+
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 164 NMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRL 223
+F M ++ +WN+ I+ VQ + +A F++ P
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM------PG--------------- 369
Query: 224 GLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
++ VS + + F GK G+I +F + ++ +TW +M
Sbjct: 370 -----------------KDMVSWTDMIKGFSGK-GEISKCVELFGMM--PEKDNITWTAM 409
Query: 284 LAALVQN-HEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACV 342
++A V N + EE C +KE P + SSVLSA A L L G +H VK +
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469
Query: 343 DENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEE 402
++ V ++LV +Y KCG+ +A ++FS + + NIV++N MI GY++ G AL LF
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFS- 528
Query: 403 MTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLAR 462
L S G P+ VT +++LSAC G V+ G F+SMK Y IEPG +HYAC+VDLL R
Sbjct: 529 -MLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGR 587
Query: 463 SGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVL 522
SGL+D A I MP P +WG+LL A + H + L ++AA+KL EL+P+ + +VVL
Sbjct: 588 SGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVL 647
Query: 523 SNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAML 582
S + + G+ + + K IKK+ G SWI +K VH F A D S EI L
Sbjct: 648 SQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTL 707
Query: 583 AKLREEMK 590
+R+EM+
Sbjct: 708 KMIRKEME 715
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 42/321 (13%)
Query: 153 YSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITF 212
Y++ G A +FDEMP R ++NA I+ +++ L G E C E N++++
Sbjct: 91 YAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDL---GKAYELFCDIPEKNAVSY 147
Query: 213 CAFLNAC--ADRLG----------LHLGRQLHAFIIRSGY------REDVSVANG----- 249
+ A R + + + ++ SGY E V V G
Sbjct: 148 ATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE 207
Query: 250 ------LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQA 303
++ Y K G IV + +F R+ + RNV+TW +M+ + E +FL+
Sbjct: 208 VVSCSSMVHGYCKMGRIVDARSLFDRM--TERNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Query: 304 RKEAE--PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
R+E + ++ + AC + G +H L + ++ ++F+G++L+ +Y K G
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGY 325
Query: 362 IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
+ A+ VF M ++ V+WN++I G + + A LFE+M V+ ++
Sbjct: 326 MGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP------GKDMVSWTDMI 379
Query: 422 SACSRAGAVESGMHIFESMKE 442
S G + + +F M E
Sbjct: 380 KGFSGKGEISKCVELFGMMPE 400
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 346 IFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
IF ++ + + + G+++ AE +F +M R+IV+W AMI YA G + A +F+EM +
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 406 GSCGIAPSYVTLVSVL--SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
+ SY +++ + + C A E I E A YA ++ R+
Sbjct: 110 ---RVTTSYNAMITAMIKNKCDLGKAYELFCDI---------PEKNAVSYATMITGFVRA 157
Query: 464 GLVDRAYEFIQNMPI 478
G D A P+
Sbjct: 158 GRFDEAEFLYAETPV 172
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 173/621 (27%), Positives = 307/621 (49%), Gaps = 46/621 (7%)
Query: 13 LESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRT 72
++ ++ RS GR +H+ +++ F+CN L++ Y ++ + A + + +
Sbjct: 237 MDKNIACRS---GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKD 293
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNM-RRDCVQPNDFTFPCVFKASSSLQMPITGKQAH 131
+V+W +IAG +N + A F N+ + V P+ T + + L +GK+ H
Sbjct: 294 LVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIH 353
Query: 132 ALALKGGQIY-DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
+ L+ + D VG + Y++ G A F M +++ +WNA + +
Sbjct: 354 SYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQ 413
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY---REDVSVA 247
+ L +S+T + L C + G+ +++H + +++G E+ +
Sbjct: 414 FQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLG 473
Query: 248 NGLIDFYGKCGDIVSSEMVFSRIGRS-RRNVVTWCSMLAALVQNHEEERACLVF------ 300
N L+D Y KCG++ + +F +G S RR +V++ S+L+ V + + A ++F
Sbjct: 474 NALLDAYAKCGNVEYAHKIF--LGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTT 531
Query: 301 ------LQARKEAE--------------------PTDFMISSVLSACAELGGLELGRSVH 334
L R AE P I ++L CA+L L L R H
Sbjct: 532 DLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCH 591
Query: 335 ALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVD 394
++ + + I + L+D+Y KCGS+++A VF +R++V + AM+ GYA G
Sbjct: 592 GYIIRGGLGD-IRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGK 650
Query: 395 MALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYA 454
AL ++ MT I P +V + ++L+AC AG ++ G+ I++S++ ++ ++P E YA
Sbjct: 651 EALMIYSHMT--ESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYA 708
Query: 455 CVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPE 514
C VDL+AR G +D AY F+ MP+ P +IWG LL AC + + LG A L + + +
Sbjct: 709 CAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESD 768
Query: 515 DSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEK 574
D+GNHV++SNM A+ +WE +R MK +KK G SW+ V + +VF + D SH +
Sbjct: 769 DTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPR 828
Query: 575 NSEIQAMLAKLREEMKKAGYF 595
I ++ L +MK+ F
Sbjct: 829 RDSIFDLVNALYLQMKEPVVF 849
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 145/555 (26%), Positives = 248/555 (44%), Gaps = 54/555 (9%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAG-C 83
GRA+H + + S + ++NMY+K ++ Q + V W ++ G
Sbjct: 40 GRALHGCVFKLGHIAC-SEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLS 98
Query: 84 VNNGR----FVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQ 139
V+ GR F A+ HF D +P+ TF V L GK H+ +K G
Sbjct: 99 VSCGRETMRFFKAM-HFA----DEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGL 153
Query: 140 IYDVFVGCSAFDMYSKTGLRV-DARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFK 198
D VG + MY+K G DA FD + +++ +WNA I+ ++ DA +F
Sbjct: 154 EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFC 213
Query: 199 EFLCVHGEPNSITFCAFLNACAD---RLGLHLGRQLHAFII-RSGYREDVSVANGLIDFY 254
L EPN T L CA + GRQ+H++++ RS + V V N L+ FY
Sbjct: 214 LMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFY 273
Query: 255 GKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPTDF 312
+ G I + +F+R+G +++V+W ++A N E +A +F L + + P
Sbjct: 274 LRVGRIEEAASLFTRMGS--KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSV 331
Query: 313 MISSVLSACAELGGLELGRSVHALAVK-ACVDENIFVGSALVDLYGKCGSIENAEQVFSE 371
I S+L CA+L L G+ +H+ ++ + + E+ VG+AL+ Y + G A FS
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSL 391
Query: 372 MPQRNIVTWNAMIGGYAH-----QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
M ++I++WNA++ +A Q + L E +TL S VT++S+L C
Sbjct: 392 MSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDS-------VTILSLLKFCIN 444
Query: 427 AGAVESGMHIFESMKEI--YRIEPGAEHYA-------CVVDLLARSGLVDRAYEFIQNMP 477
+ +KE+ Y ++ G H ++D A+ G V+ A++ +
Sbjct: 445 VQGI-------GKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLS 497
Query: 478 IHPTISIWGALLGACRMHGKTKLGKVAAEKLF-ELDPEDSGNHVVLSNMLASAGRWEEAT 536
T+ + +LL G A+ LF E+ D ++ + A + EA
Sbjct: 498 ERRTLVSYNSLLSGYVNSGSHD----DAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAI 553
Query: 537 IVRKEMKDIGIKKNV 551
V +E++ G++ N
Sbjct: 554 GVFREIQARGMRPNT 568
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 189/390 (48%), Gaps = 16/390 (4%)
Query: 111 FPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP 170
F V KA +S+ +G+ H K G I V S +MY+K D + MF +M
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 171 QRNLATWNAYISN-AVQDGRSLDAVGAFKEF-LCVHGEPNSITFCAFLNACADRLG-LHL 227
+ WN ++ +V GR + + FK +P+S+TF L C RLG +
Sbjct: 84 SLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCV-RLGDSYN 140
Query: 228 GRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL 287
G+ +H++II++G +D V N L+ Y K G I + G + ++VV+W +++A
Sbjct: 141 GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT-AFDGIADKDVVSWNAIIAGF 199
Query: 288 VQNHEEERACLVF-LQARKEAEPTDFMISSVLSACAELG---GLELGRSVHALAV-KACV 342
+N+ A F L ++ EP I++VL CA + GR +H+ V ++ +
Sbjct: 200 SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 343 DENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEE 402
++FV ++LV Y + G IE A +F+ M +++V+WN +I GYA + A LF
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 403 MTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFES-MKEIYRIEPGAEHYACVVDLLA 461
+ + ++P VT++S+L C++ + SG I ++ Y +E + A ++ A
Sbjct: 320 L-VHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNA-LISFYA 377
Query: 462 RSGLVDRAYEFIQNMPIHPTISIWGALLGA 491
R G AY M IS W A+L A
Sbjct: 378 RFGDTSAAYWAFSLMSTKDIIS-WNAILDA 406
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 232/431 (53%), Gaps = 14/431 (3%)
Query: 171 QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG---EPNSITFCAFLNACADRLGLHL 227
QR + + GR +AVG L G EP T+ L C R
Sbjct: 73 QRKTEKLDKTLKGLCVTGRLKEAVG----LLWSSGLQVEPE--TYAVLLQECKQRKEYTK 126
Query: 228 GRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL 287
G+++HA + G+ + + L+ Y GD+ ++ ++F + R+++ W +M++
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL--KIRDLIPWNAMISGY 184
Query: 288 VQNHEEERACLVFLQARK-EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENI 346
VQ E+ ++ R+ P + +SV AC+ L LE G+ HA+ +K C+ NI
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI 244
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLG 406
V SALVD+Y KC S + +VF ++ RN++TW ++I GY + G V L FE+M
Sbjct: 245 IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 407 SCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLV 466
C P+ VT + VL+AC+ G V+ G F SMK Y IEP +HYA +VD L R+G +
Sbjct: 305 GC--RPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 362
Query: 467 DRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNML 526
AYEF+ P +WG+LLGACR+HG KL ++AA K ELDP + GN+VV +N
Sbjct: 363 QEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGY 422
Query: 527 ASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLR 586
AS G E A+ VR++M++ G+KK+ GYS I ++ VH F D+SH + +I + ++
Sbjct: 423 ASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMT 482
Query: 587 EEMKKAGYFPD 597
Y+PD
Sbjct: 483 SFFMDIDYYPD 493
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 6 PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVL 65
P + LL+ + G+ +HAQ+ L +L L+ +Y+ L +A +
Sbjct: 108 PETYAVLLQECKQRKEYTKGKRIHAQMFVVG-FALNEYLKVKLLILYALSGDLQTAGILF 166
Query: 66 SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPI 125
+R ++ W ++I+G V G L + +MR++ + P+ +TF VF+A S+L
Sbjct: 167 RSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLE 226
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
GK+AHA+ +K ++ V + DMY K D +FD++ RN+ TW + IS
Sbjct: 227 HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 186 QDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNAC 219
G+ + + F++ PN +TF L AC
Sbjct: 287 YHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 187/594 (31%), Positives = 298/594 (50%), Gaps = 53/594 (8%)
Query: 4 HPPNLLS--SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA 61
H PN + LL+S + GR +HAQ++++ + F L++MY K+ + A
Sbjct: 27 HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFF-VDVFTATALVSMYMKVKQVTDA 85
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSL 121
VL R + + + ++G + NG A F + R N T V +
Sbjct: 86 LKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI 145
Query: 122 QMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYI 181
+ G Q H LA+K G +V+VG S MYS+ G V A MF+++P +++ T+NA+I
Sbjct: 146 E---GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 182 SNAVQDGRSLDAVGAF---KEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRS 238
S +++G F ++F EPN +TF + ACA L L GRQLH +++
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKF--SSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKK 260
Query: 239 GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACL 298
++ + V LID Y KC S+ +VF+ + + RN+++W S+++ ++ N + E A
Sbjct: 261 EFQFETMVGTALIDMYSKCRCWKSAYIVFTEL-KDTRNLISWNSVISGMMINGQHETAVE 319
Query: 299 VF----------------------------LQARKEAE--------PTDFMISSVLSACA 322
+F ++A K E P+ ++S+LSAC+
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACS 379
Query: 323 ELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFS--EMPQRNIVTW 380
++ L+ G+ +H +KA + +IFV ++L+D+Y KCG A ++F E ++ V W
Sbjct: 380 DIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFW 439
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
N MI GY G+ + A+ +FE L + PS T +VLSACS G VE G IF M
Sbjct: 440 NVMISGYGKHGECESAIEIFE--LLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLM 497
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
+E Y +P EH C++DLL RSG + A E I M + +LLG+CR H L
Sbjct: 498 QEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVL 556
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
G+ AA KL EL+PE+ V+LS++ A+ RWE+ +R+ + + K G S
Sbjct: 557 GEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 280/534 (52%), Gaps = 13/534 (2%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL--RTVVTWTSLIAG 82
GR +H +++ F+ + + + YSK N ++ LS L + +WTS+IA
Sbjct: 249 GRCLHGFAVKNGLAS-SKFVQSSMFSFYSKSG--NPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 83 CVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYD 142
+G + F M+ + P+ C+ + + GK H ++ D
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLD 365
Query: 143 VFVGCSAFDMYSKTGLRVDARNMFDEMPQR-NLATWNAYISNAVQDGRSLDAVGAFKEFL 201
V S MY K L A +F + + N WN + + + + F++
Sbjct: 366 STVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQ 425
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
+ E +S + + +++C+ + LG+ LH +++++ +SV N LID YGK GD+
Sbjct: 426 NLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLT 485
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSA 320
+ +F + NV+TW +M+A+ V + E+A +F + E +P+ + ++L A
Sbjct: 486 VAWRMFCE---ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMA 542
Query: 321 CAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
C G LE G+ +H + + N+ + +AL+D+Y KCG +E + ++F Q++ V W
Sbjct: 543 CVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCW 602
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
N MI GY GDV+ A+ LF++M + P+ T +++LSAC+ AG VE G +F M
Sbjct: 603 NVMISGYGMHGDVESAIALFDQME--ESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM 660
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
+ Y ++P +HY+C+VDLL+RSG ++ A + +MP P IWG LL +C HG+ ++
Sbjct: 661 HQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEM 719
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
G AE+ DP++ G +++L+NM ++AG+WEEA R+ M++ G+ K G+S
Sbjct: 720 GIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 242/533 (45%), Gaps = 11/533 (2%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
+G VH +++ + + + YSK L A V R VV WT++I+G
Sbjct: 143 VGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGH 202
Query: 84 VNNGRFVAALLHFVNMRR---DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQI 140
V NG L + M D +PN T C F+A S+L G+ H A+K G
Sbjct: 203 VQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLA 262
Query: 141 YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEF 200
FV S F YSK+G +A F E+ ++ +W + I++ + G ++ F E
Sbjct: 263 SSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322
Query: 201 LCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDI 260
P+ + +N + + G+ H F+IR + D +V N L+ Y K +
Sbjct: 323 QNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELL 382
Query: 261 VSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLS 319
+E +F RI N W +ML + + +F + + D +SV+S
Sbjct: 383 SVAEKLFCRISE-EGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVT 379
+C+ +G + LG+S+H VK +D I V ++L+DLYGK G + A ++F E N++T
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVIT 500
Query: 380 WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFES 439
WNAMI Y H + A+ LF+ M S PS +TLV++L AC G++E G I
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMV--SENFKPSSITLVTLLMACVNTGSLERGQMIHRY 558
Query: 440 MKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
+ E E A ++D+ A+ G ++++ E + W ++ MHG +
Sbjct: 559 ITETEH-EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAV-CWNVMISGYGMHGDVE 616
Query: 500 LGKVAAEKLFELDPEDSG-NHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNV 551
+++ E D + +G + L + AG E+ + +M +K N+
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNL 669
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 211/453 (46%), Gaps = 33/453 (7%)
Query: 6 PNLLSSLLESAVSTRSP--------LLGRAVHAQIIRSHETPLPS-------FLCNHLIN 50
PNL+ +L + + S+ S L +++ + +R H + + F+ + LI+
Sbjct: 8 PNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLIS 67
Query: 51 MYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFT 110
Y+ N + V L R + W S+I +NG + +L F +M P+ FT
Sbjct: 68 SYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFT 127
Query: 111 FPCVFKASSSLQMPITGKQAHALALK-GGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEM 169
P V A + L G H L LK GG + VG S YSK G DA +FDEM
Sbjct: 128 APMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEM 187
Query: 170 PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLC-VHG------EPNSITFCAFLNACADR 222
P R++ W A IS VQ+G S +G +LC +H +PN T AC++
Sbjct: 188 PDRDVVAWTAIISGHVQNGESEGGLG----YLCKMHSAGSDVDKPNPRTLECGFQACSNL 243
Query: 223 LGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
L GR LH F +++G V + + FY K G+ + + F +G ++ +W S
Sbjct: 244 GALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG--DEDMFSWTS 301
Query: 283 MLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
++A+L ++ + E + +F + + K P +IS +++ ++ + G++ H ++ C
Sbjct: 302 IIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHC 361
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMALGLF 400
+ V ++L+ +Y K + AE++F + + N WN M+ GY + LF
Sbjct: 362 FSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELF 421
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG 433
++ + GI + SV+S+CS GAV G
Sbjct: 422 RKIQ--NLGIEIDSASATSVISSCSHIGAVLLG 452
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 5/195 (2%)
Query: 307 AEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
A D IS +L C + LE R +AL + + ENIFV S L+ Y G +
Sbjct: 22 ASYVDRHISVIL--CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSS 79
Query: 367 QVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
+VF + +R+I WN++I + GD +L F M L G +P + T V+SAC+
Sbjct: 80 RVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLS--GQSPDHFTAPMVVSACAE 137
Query: 427 AGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWG 486
G + + + + A V ++ G + A MP ++ W
Sbjct: 138 LLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVA-WT 196
Query: 487 ALLGACRMHGKTKLG 501
A++ +G+++ G
Sbjct: 197 AIISGHVQNGESEGG 211
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/564 (29%), Positives = 284/564 (50%), Gaps = 6/564 (1%)
Query: 28 VHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNG 87
+HA +I + S + LI ++ ++ A+ V R V + S+I
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 88 RFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGC 147
L + M + +QP+ TF KA S + G+ A+ G DVFV
Sbjct: 96 NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCS 155
Query: 148 SAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEP 207
S ++Y K G +A +F +M +R++ W ++ Q G+SL AV ++E
Sbjct: 156 SVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGR 215
Query: 208 NSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVF 267
+ + L A D +GR +H ++ R+G +V V L+D Y K G I + VF
Sbjct: 216 DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF 275
Query: 268 SRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGG 326
SR+ + V+W S+++ QN +A ++ + +P + VL AC+++G
Sbjct: 276 SRM--MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS 333
Query: 327 LELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGG 386
L+ GR VH +K V + + +AL+D+Y KCG++ ++ ++F + ++++V WN MI
Sbjct: 334 LKTGRLVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISC 392
Query: 387 YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRI 446
Y G+ + LF +MT I P + T S+LSA S +G VE G H F M Y+I
Sbjct: 393 YGIHGNGQEVVSLFLKMT--ESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKI 450
Query: 447 EPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAE 506
+P +HY C++DLLAR+G V+ A + I + + + IW ALL C H +G +AA
Sbjct: 451 QPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAAN 510
Query: 507 KLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQ 566
K+ +L+P+ G ++SN A+A +W+E VRK M++ ++K GYS I V + F
Sbjct: 511 KILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFL 570
Query: 567 AKDSSHEKNSEIQAMLAKLREEMK 590
+D SH ++ + +L L+ E++
Sbjct: 571 MEDLSHHEHYHMLQVLRNLKTEIR 594
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 283/546 (51%), Gaps = 37/546 (6%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
L+E+ R GR +HA ++ S L + L+ Y + + A+ V R
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTR-IAAKLVTFYVECGKVLDARKVFDEMPKR 80
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAH 131
+ +I C NG + +L F M +D ++ + F P + KAS +L GK H
Sbjct: 81 DISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIH 140
Query: 132 ALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSL 191
L LK D F+ S DMYSK G +AR +F ++ +++L +NA IS + ++
Sbjct: 141 CLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQAD 200
Query: 192 DAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLI 251
+A+ K+ + +P+ IT+ A ++ + ++ + GY+ DV
Sbjct: 201 EALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDV------- 253
Query: 252 DFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPT 310
V+W S+++ LV N + E+A F Q P
Sbjct: 254 --------------------------VSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPN 287
Query: 311 DFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFS 370
I ++L AC L ++ G+ +H +V ++++ FV SAL+D+YGKCG I A +F
Sbjct: 288 SATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFR 347
Query: 371 EMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAV 430
+ P++ VT+N+MI YA+ G D A+ LF++M + G ++T ++L+ACS AG
Sbjct: 348 KTPKKTTVTFNSMIFCYANHGLADKAVELFDQME--ATGEKLDHLTFTAILTACSHAGLT 405
Query: 431 ESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLG 490
+ G ++F M+ YRI P EHYAC+VDLL R+G + AYE I+ M + P + +WGALL
Sbjct: 406 DLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLA 465
Query: 491 ACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKN 550
ACR HG +L ++AA+ L EL+PE+SGN ++L+++ A+AG WE ++K +K ++
Sbjct: 466 ACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRF 525
Query: 551 VGYSWI 556
+G SW+
Sbjct: 526 LGSSWV 531
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/557 (31%), Positives = 281/557 (50%), Gaps = 23/557 (4%)
Query: 8 LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSL 67
L++S+++ V + + +I+R T N LI+ Y K L++ A +
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSW-----NTLISGYCKAGLMDEAVTLFHR 198
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITG 127
VV+W LI+G V+ G AL V M+R+ + + F PC KA S + G
Sbjct: 199 MPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG 257
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP---QRNLATWNAYISNA 184
KQ H +K G F + DMYS G + A ++F + ++A WN+ +S
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 185 VQDGRSLDAV----GAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY 240
+ + + A+ ++ LC +S T L C + + L LG Q+H+ ++ SGY
Sbjct: 318 LINEENEAALWLLLQIYQSDLCF----DSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 241 REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF 300
D V + L+D + G+I + +F R+ ++++ + ++ V++ A +F
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRL--PNKDIIAFSGLIRGCVKSGFNSLAFYLF 431
Query: 301 LQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
+ K D F++S++L C+ L L G+ +H L +K + +ALVD+Y KC
Sbjct: 432 RELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKC 491
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
G I+N +F M +R++V+W +I G+ G V+ A F +M + GI P+ VT +
Sbjct: 492 GEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMI--NIGIEPNKVTFLG 549
Query: 420 VLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH 479
+LSAC +G +E E+MK Y +EP EHY CVVDLL ++GL A E I MP+
Sbjct: 550 LLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLE 609
Query: 480 PTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVR 539
P +IW +LL AC H L V AEKL + P+D + LSN A+ G W++ + VR
Sbjct: 610 PDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVR 669
Query: 540 KEMKDIGIKKNVGYSWI 556
+ K +G K++ G SWI
Sbjct: 670 EAAKKLGAKES-GMSWI 685
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 161/661 (24%), Positives = 277/661 (41%), Gaps = 100/661 (15%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
G ++ A +I+ + F+ N++I+MY LL+ A V R +VTWT++++G
Sbjct: 24 GESIQAHVIKQGISQ-NVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT 82
Query: 85 NNGRFVAAL-LHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
++G+ A+ L+ + + N+F + V KA + G + K DV
Sbjct: 83 SDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDV 142
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEF--- 200
+ S DMY K G ++A + F E+ + + +WN IS + G +AV F
Sbjct: 143 VLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQP 202
Query: 201 -----------LCVHGEPNSITF-----------------CAFLNACADRLGLHLGRQLH 232
G P ++ F C L AC+ L +G+QLH
Sbjct: 203 NVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCG-LKACSFGGLLTMGKQLH 261
Query: 233 AFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS-RRNVVTWCSMLAALVQNH 291
+++SG + LID Y CG ++ + VF + + +V W SML+ + N
Sbjct: 262 CCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINE 321
Query: 292 EEERACLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGS 350
E E A + LQ + D + +S L C L LG VH+L V + + + VGS
Sbjct: 322 ENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGS 381
Query: 351 ALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM------- 403
LVDL+ G+I++A ++F +P ++I+ ++ +I G G +A LF E+
Sbjct: 382 ILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDA 441
Query: 404 -------------TLGSCG---------IAPSY----VTLVSVLSACSRAGAVESGMHIF 437
+L S G I Y VT +++ + G +++G+ +F
Sbjct: 442 DQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLF 501
Query: 438 ESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQ---NMPIHPTISIWGALLGACRM 494
+ M +E + ++ ++G V+ A+ + N+ I P + LL ACR
Sbjct: 502 DGM-----LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRH 556
Query: 495 HGKTKLGKVAAEKL---FELDPEDSGNHVVLSNMLASAGRWEEA-------------TIV 538
G + + E + + L+P + V+ ++L AG ++EA TI
Sbjct: 557 SGLLEEARSTLETMKSEYGLEPYLEHYYCVV-DLLGQAGLFQEANELINKMPLEPDKTIW 615
Query: 539 RKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQA------MLAKLREEMKKA 592
+ G KN G + + + F S + S A L+K+RE KK
Sbjct: 616 TSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKL 675
Query: 593 G 593
G
Sbjct: 676 G 676
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Query: 214 AFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS 273
A L C G + A +I+ G ++V +AN +I Y + + VF + S
Sbjct: 10 AGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM--S 67
Query: 274 RRNVVTWCSMLAALVQNHEEERACLVF---LQARKEAEPTDFMISSVLSACAELGGLELG 330
RN+VTW +M++ + + +A ++ L + +EA +FM S+VL AC +G ++LG
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEA-ANEFMYSAVLKACGLVGDIQLG 126
Query: 331 RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQ 390
V+ K + ++ + +++VD+Y K G + A F E+ + + +WN +I GY
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 391 GDVDMALGLFEEM 403
G +D A+ LF M
Sbjct: 187 GLMDEAVTLFHRM 199
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 36/209 (17%)
Query: 313 MISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM 372
+I++ L C ++ + G S+ A +K + +N+F+ + ++ +Y + +A +VF EM
Sbjct: 7 LIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM 66
Query: 373 PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVES 432
+RNIVTW M+ GY G + A+ L+ M L S A + +VL AC G ++
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRM-LDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 433 GMHIFE--------------------------------SMKEIYRIEPGAEHYACVVDLL 460
G+ ++E S KEI R P + + ++
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILR--PSSTSWNTLISGY 183
Query: 461 ARSGLVDRAYEFIQNMPIHPTISIWGALL 489
++GL+D A MP P + W L+
Sbjct: 184 CKAGLMDEAVTLFHRMP-QPNVVSWNCLI 211
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 180/604 (29%), Positives = 285/604 (47%), Gaps = 70/604 (11%)
Query: 60 SAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASS 119
SA+ V V W +++ G A+ F +R +P+D++F + +
Sbjct: 22 SARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCA 81
Query: 120 SLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTG-----------LRVDARN---- 164
SL G++ +L ++ G + V S DMY K + D+RN
Sbjct: 82 SLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTW 141
Query: 165 ------------------MFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE 206
+F EMP+R WN IS G+ + FKE L +
Sbjct: 142 CSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFK 201
Query: 207 PNSITFCAFLNAC-ADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCG------- 258
P+ TF + +NAC AD + GR +HA ++++G+ V N ++ FY K G
Sbjct: 202 PDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMR 261
Query: 259 DIVSSEMVFS-----------RIGRSRR-----------NVVTWCSMLAALVQNHEEERA 296
++ S E++ +IG + + N+VTW +M+ +N + E+A
Sbjct: 262 ELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQA 321
Query: 297 CLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDL 355
F++ K +D F +VL AC+ L L G+ +H + +VG+ALV+L
Sbjct: 322 LRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNL 381
Query: 356 YGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYV 415
Y KCG I+ A++ F ++ +++V+WN M+ + G D AL L++ M + GI P V
Sbjct: 382 YAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMI--ASGIKPDNV 439
Query: 416 TLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLV----DRAYE 471
T + +L+ CS +G VE G IFESM + YRI +H C++D+ R G + D A
Sbjct: 440 TFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATT 499
Query: 472 FIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGR 531
+ + S W LLGAC H T+LG+ ++ L +P + + V+LSN+ S GR
Sbjct: 500 YSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGR 559
Query: 532 WEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKK 591
W+E VR+EM + G+KK G SWI V N+V F DSSH + E+ L L+ EM+
Sbjct: 560 WKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMRN 619
Query: 592 AGYF 595
F
Sbjct: 620 PETF 623
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 179/414 (43%), Gaps = 82/414 (19%)
Query: 154 SKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFC 213
+K+G AR +FD MP+ + WN +++ + G +A+ F + +P+ +F
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 214 AFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS 273
A L+ CA + GR++ + +IRSG+ + V N LID YGKC D +S+ VF +
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 274 RRNVVTWCSMLAALVQNHEEERACLVFLQARK---------------------------- 305
RN VTWCS+L A + + E A VF++ K
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 306 ----EAEPTDFMISSVLSAC-AELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
E +P + SS+++AC A+ + GR VHA+ +K + ++++ Y K G
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 361 S-------------------------------IENAEQVFSEMPQRNIVTWNAMIGGYAH 389
S E A +VF P++NIVTW MI GY
Sbjct: 255 SRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
GD + AL F EM G+ + +VL ACS + G I + I G
Sbjct: 315 NGDGEQALRFFVEMM--KSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL-----IHCG 367
Query: 450 AEHYACV----VDLLARSGLV---DRAYEFIQNMPIHPTISIWGALLGACRMHG 496
+ YA V V+L A+ G + DRA+ I N + W +L A +HG
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVS----WNTMLFAFGVHG 417
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 158/380 (41%), Gaps = 47/380 (12%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
L+ Y + +A V R W +I+G + G+ + L F M +P+
Sbjct: 144 LLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPD 203
Query: 108 DFTFPCVFKASSSLQMPIT-GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDAR--- 163
+TF + A S+ + G+ HA+ LK G V S Y+K G R DA
Sbjct: 204 CYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMREL 263
Query: 164 ----------------------------NMFDEMPQRNLATWNAYISNAVQDGRSLDAVG 195
+F P++N+ TW I+ ++G A+
Sbjct: 264 ESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALR 323
Query: 196 AFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYG 255
F E + + + + A L+AC+ L G+ +H +I G++ V N L++ Y
Sbjct: 324 FFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYA 383
Query: 256 KCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMI 314
KCGDI ++ F I + +++V+W +ML A + ++A ++ +P +
Sbjct: 384 KCGDIKEADRAFGDI--ANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTF 441
Query: 315 SSVLSACAELGGLELGRSVHALAVKACVDENIFVG----SALVDLYGKCGSIENAEQV-- 368
+L+ C+ G +E G + VK D I + + ++D++G+ G + A+ +
Sbjct: 442 IGLLTTCSHSGLVEEGCMIFESMVK---DYRIPLEVDHVTCMIDMFGRGGHLAEAKDLAT 498
Query: 369 -FSEM--PQRNIVTWNAMIG 385
+S + N +W ++G
Sbjct: 499 TYSSLVTDSSNNSSWETLLG 518
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 136/335 (40%), Gaps = 37/335 (11%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N +I+ K+ A V L + +VTWT++I G NG AL FV M + V
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNM 165
+ F + V A S L + GK H + G +VG + ++Y+K G +A
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRA 394
Query: 166 FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
F ++ ++L +WN + G + A+ + + +P+++TF L C+ +
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 226 HLGRQLHAFIIRSGYREDVSV--ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
G + +++ YR + V +ID +G+ G + ++ T+ S+
Sbjct: 455 EEGCMIFESMVKD-YRIPLEVDHVTCMIDMFGRGG----------HLAEAKDLATTYSSL 503
Query: 284 LAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSV-HALAVKACV 342
+ N E ++L AC+ ELGR V L +
Sbjct: 504 VTDSSNNSSWE---------------------TLLGACSTHWHTELGREVSKVLKIAEPS 542
Query: 343 DENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI 377
+E FV L +LY G + E V EM +R +
Sbjct: 543 EEMSFV--LLSNLYCSTGRWKEGEDVRREMVERGM 575
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 239/466 (51%), Gaps = 35/466 (7%)
Query: 153 YSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITF 212
Y K+G+ V AR +FD MP+R++ +WN + QDG +A+ +KEF + N +F
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 213 CAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVF----- 267
L AC L L RQ H ++ +G+ +V ++ +ID Y KCG + S++ F
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 268 -------------SRIG-----------RSRRNVVTWCSMLAALVQNHEEERACLVFLQA 303
+++G +N V+W +++A V+ RA +F +
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 304 RK-EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSI 362
+P F SS L A A + L G+ +H ++ V N V S+L+D+Y K GS+
Sbjct: 303 IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 363 ENAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
E +E+VF + + V WN MI A G AL + ++M + P+ TLV +L
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI--KFRVQPNRTTLVVIL 420
Query: 422 SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPT 481
+ACS +G VE G+ FESM + I P EHYAC++DLL R+G I+ MP P
Sbjct: 421 NACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPD 480
Query: 482 ISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKE 541
IW A+LG CR+HG +LGK AA++L +LDPE S +++LS++ A G+WE +R
Sbjct: 481 KHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGV 540
Query: 542 MKDIGIKKNVGYSWIAVKNRVHVFQAKDSS--HEKNSEIQAMLAKL 585
MK + K SWI ++ +V F D S H + EI +L L
Sbjct: 541 MKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 219/495 (44%), Gaps = 72/495 (14%)
Query: 5 PPNLLSSLLESAVSTRSPLLGRAVHAQI-IRSHETPLPSFLCNHLINMYSKLDLLNSAQH 63
P +LL+SLL+ T+S G+ +H + I + P + L NHLI MY K A
Sbjct: 45 PFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRP-NTLLSNHLIGMYMKCGKPIDACK 103
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNM------------------------ 99
V HLR + +W ++++G V +G V A + F +M
Sbjct: 104 VFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 100 -------RRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDM 152
RR ++ N+F+F + A + +QAH L G + +V + CS D
Sbjct: 164 LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 153 YSKTGLRVDARNMFDEM-------------------------------PQRNLATWNAYI 181
Y+K G A+ FDEM P++N +W A I
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALI 283
Query: 182 SNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYR 241
+ V+ G A+ F++ + + +P TF + L A A L G+++H ++IR+ R
Sbjct: 284 AGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVR 343
Query: 242 EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQN---HEEERACL 298
+ V + LID Y K G + +SE VF RI + + V W +M++AL Q+ H+ R
Sbjct: 344 PNAIVISSLIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMISALAQHGLGHKALRMLD 402
Query: 299 VFLQARKEAEPTDFMISSVLSACAELGGLELG-RSVHALAVKACVDENIFVGSALVDLYG 357
++ R + T ++ +L+AC+ G +E G R ++ V+ + + + L+DL G
Sbjct: 403 DMIKFRVQPNRTTLVV--ILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLG 460
Query: 358 KCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVT 416
+ G + + EMP + + WNA++G G+ ++ +E+ + Y+
Sbjct: 461 RAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYIL 520
Query: 417 LVSVLSACSRAGAVE 431
L S+ + + VE
Sbjct: 521 LSSIYADHGKWELVE 535
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 164/400 (41%), Gaps = 78/400 (19%)
Query: 212 FCAFLNACADRLGLHLGRQLHAFIIRSGY-REDVSVANGLIDFYGKCGDIVSSEMVFSRI 270
+ L C D L G+ +H + +G+ R + ++N LI Y KCG + + VF ++
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 271 G---------------------RSR--------RNVVTWCSMLAALVQNHEEERACLVFL 301
R+R R+VV+W +M+ Q+ A +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 302 QARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
+ R+ + +F + +L+AC + L+L R H + A N+ + +++D Y KCG
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 361 SIEN-------------------------------AEQVFSEMPQRNIVTWNAMIGGYAH 389
+E+ AE++F EMP++N V+W A+I GY
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
QG + AL LF +M + G+ P T S L A + ++ G I M + P
Sbjct: 289 QGSGNRALDLFRKMI--ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPN 345
Query: 450 AEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKL- 508
A + ++D+ ++SG ++ + + W ++ A HG LG A L
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLD 402
Query: 509 ----FELDPEDSGNHVVL-----SNMLASAGRWEEATIVR 539
F + P + V+L S ++ RW E+ V+
Sbjct: 403 DMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQ 442
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 48/276 (17%)
Query: 309 PTDFMISSVLSACAELGGLELGRSVHA-LAVKACVDENIFVGSALVDLYGKCGS------ 361
P D +++S+L C + L+ G+ +H L + N + + L+ +Y KCG
Sbjct: 45 PFD-LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACK 103
Query: 362 -------------------------IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMA 396
+ A VF MP+R++V+WN M+ GYA G++ A
Sbjct: 104 VFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 397 LGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV 456
L ++E GI + + +L+AC ++ ++ + + +
Sbjct: 164 LWFYKEFR--RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVL-VAGFLSNVVLSCSI 220
Query: 457 VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKV-AAEKLFELDPED 515
+D A+ G ++ A M + I IW L+ G KLG + AAEKLF PE
Sbjct: 221 IDAYAKCGQMESAKRCFDEMTV-KDIHIWTTLIS-----GYAKLGDMEAAEKLFCEMPEK 274
Query: 516 SGNHVVLSNMLAS---AGRWEEATIVRKEMKDIGIK 548
N V + ++A G A + ++M +G+K
Sbjct: 275 --NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 279/542 (51%), Gaps = 22/542 (4%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL--RTVVTWTSLIA 81
G+ VH+ +I++ + S + N LI MY ++ A V T + R VT+ +I
Sbjct: 207 FGKQVHSLVIKAG-FFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVID 265
Query: 82 GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIY 141
G R +LL F M ++P D TF V + S M G Q H LA+K G
Sbjct: 266 GLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEK 321
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
V + MYS A +F+ + +++L TWN IS+ Q A+ +K
Sbjct: 322 YTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMH 381
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
+ +P+ TF + L A L L + + A II+ G + ++N LI Y K G I
Sbjct: 382 IIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIE 438
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNH-----EEERACLVFLQARKEAEPTDFMISS 316
++++F R R+N+++W ++++ N E +CL L++ P + +S+
Sbjct: 439 KADLLFER--SLRKNLISWNAIISGFYHNGFPFEGLERFSCL--LESEVRILPDAYTLST 494
Query: 317 VLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRN 376
+LS C L LG HA ++ + +G+AL+++Y +CG+I+N+ +VF++M +++
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKD 554
Query: 377 IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
+V+WN++I Y+ G+ + A+ ++ M + P T +VLSACS AG VE G+ I
Sbjct: 555 VVSWNSLISAYSRHGEGENAVNTYKTMQ-DEGKVIPDAATFSAVLSACSHAGLVEEGLEI 613
Query: 437 FESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQ--NMPIHPTISIWGALLGACRM 494
F SM E + + +H++C+VDLL R+G +D A ++ I + +W AL AC
Sbjct: 614 FNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAA 673
Query: 495 HGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
HG KLGK+ A+ L E + +D +V LSN+ A AG W+EA R+ + IG K G S
Sbjct: 674 HGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Query: 555 WI 556
W+
Sbjct: 734 WM 735
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 167/386 (43%), Gaps = 41/386 (10%)
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRR-DCVQPNDFTFPCVFKASSSLQMPITGKQA 130
T++ + G +G AL F ++ R ++P+ ++ + L+ I G Q
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQV 79
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDE---------------------- 168
H A++ G + V + +Y + G + FDE
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 169 ---------MPQRN-LATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNA 218
MP+R+ +A WNA I+ + G +V F+E + + F L+
Sbjct: 140 EYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSM 199
Query: 219 CADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV 278
C D L G+Q+H+ +I++G+ SV N LI Y C +V + +VF + R+ V
Sbjct: 200 C-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQV 258
Query: 279 TWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALA 337
T+ ++ L +E + LVF + + + PTD SV+ +C+ +G VH LA
Sbjct: 259 TFNVVIDGLAGFKRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLA 314
Query: 338 VKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMAL 397
+K ++ V +A + +Y A +VF + ++++VTWN MI Y A+
Sbjct: 315 IKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAM 374
Query: 398 GLFEEMTLGSCGIAPSYVTLVSVLSA 423
+++ M + G+ P T S+L+
Sbjct: 375 SVYKRMHI--IGVKPDEFTFGSLLAT 398
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
LS+LL VST S +LG HA ++R H + + N LINMYS+ + ++ V +
Sbjct: 492 LSTLLSICVSTSSLMLGSQTHAYVLR-HGQFKETLIGNALINMYSQCGTIQNSLEVFNQM 550
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQPNDFTFPCVFKASS 119
+ VV+W SLI+ +G A+ + M+ + V P+ TF V A S
Sbjct: 551 SEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACS 602
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 252/474 (53%), Gaps = 39/474 (8%)
Query: 161 DARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
+A +FDE+P+ ++ + A I V++ R ++A AFK LC+ PN TF + +
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 221 DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI---------- 270
+ LG+QLH + ++ G +V V + +++ Y K + + F
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 271 -------------------GRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE--P 309
R+VVTW +++ Q E A F+ +E P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 310 TDFMISSVLSACAELGGLELGRSVHALAVKACVDE-NIFVGSALVDLYGKCGSIENAEQV 368
+ ++A + + G+S+HA A+K N+FV ++L+ Y KCG++E++
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284
Query: 369 FSEMP--QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
F+++ QRNIV+WN+MI GYAH G + A+ +FE+M + + P+ VT++ VL AC+
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM-VKDTNLRPNNVTILGVLFACNH 343
Query: 427 AGAVESGMHIFESMKEIYRIEPGA---EHYACVVDLLARSGLVDRAYEFIQNMPIHPTIS 483
AG ++ G F Y +P EHYAC+VD+L+RSG A E I++MP+ P I
Sbjct: 344 AGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 484 IWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMK 543
W ALLG C++H +L K+AA K+ ELDP D ++V+LSN ++ W+ +++R++MK
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 544 DIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPD 597
+ G+K+ G SWI V++++ VF D ++E E+ MLA + + +++ + D
Sbjct: 463 ETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEENECWKD 516
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 169/371 (45%), Gaps = 41/371 (11%)
Query: 56 DLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVF 115
DL+ +A V V++ T++I V R V A F + ++PN+FTF V
Sbjct: 41 DLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVI 100
Query: 116 KASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDE------- 168
+S++ + GKQ H ALK G +VFVG + + Y K DAR FD+
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVV 160
Query: 169 ------------------------MPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
MP+R++ TWNA I Q GR+ +AV F + L
Sbjct: 161 SITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDML-RE 219
Query: 205 GE--PNSITFCAFLNACADRLGLHLGRQLHAFIIRS-GYREDVSVANGLIDFYGKCGDIV 261
G PN TF + A ++ G+ +HA I+ G R +V V N LI FY KCG++
Sbjct: 220 GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNME 279
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA--EPTDFMISSVLS 319
S + F+++ +RN+V+W SM+ N E A +F + K+ P + I VL
Sbjct: 280 DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLF 339
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFV---GSALVDLYGKCGSIENAEQVFSEMP-QR 375
AC G ++ G AV D N+ + +VD+ + G + AE++ MP
Sbjct: 340 ACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDP 399
Query: 376 NIVTWNAMIGG 386
I W A++GG
Sbjct: 400 GIGFWKALLGG 410
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 131/275 (47%), Gaps = 54/275 (19%)
Query: 6 PNLLS--SLLESAVSTRSPLLGRAVHAQIIRSHETPLPS--FLCNHLINMYSKLDLLNSA 61
PN + +++ S+ ++R LG+ +H ++ L S F+ + ++N Y KL L A
Sbjct: 91 PNEFTFGTVIGSSTTSRDVKLGKQLHCYALK---MGLASNVFVGSAVLNCYVKLSTLTDA 147
Query: 62 Q---------HVLSLTHL----------------------RTVVTWTSLIAGCVNNGRFV 90
+ +V+S+T+L R+VVTW ++I G GR
Sbjct: 148 RRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNE 207
Query: 91 AALLHFVNMRRD-CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKG-GQIYDVFVGCS 148
A+ FV+M R+ V PN+ TFPC A S++ GK HA A+K G+ ++VFV S
Sbjct: 208 EAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNS 267
Query: 149 AFDMYSKTGLRVDARNMFD--EMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLC-VHG 205
YSK G D+ F+ E QRN+ +WN+ I +GR +AV F++ + +
Sbjct: 268 LISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNL 327
Query: 206 EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY 240
PN++T L AC HA +I+ GY
Sbjct: 328 RPNNVTILGVLFACN-----------HAGLIQEGY 351
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 260/519 (50%), Gaps = 40/519 (7%)
Query: 44 LCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC 103
L N L+ +Y+K +N A+ + + VV+W +I G R ++ MR
Sbjct: 286 LNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSG 345
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDAR 163
QPN+ T V A + G + +TG R
Sbjct: 346 FQPNEVTCISVLGA----------------CFRSGDV--------------ETG-----R 370
Query: 164 NMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRL 223
+F +PQ +++ WNA +S +A+ F++ + +P+ T L++CA
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 224 GLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
L G+Q+H +IR+ ++ + +GLI Y +C + SE +F + ++ W SM
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC-INELDIACWNSM 489
Query: 284 LAALVQNHEEERACLVFLQARKEAE--PTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
++ N + +A ++F + + A P + ++VLS+C+ L L GR H L VK+
Sbjct: 490 ISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSG 549
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
+ FV +AL D+Y KCG I++A Q F + ++N V WN MI GY H G D A+GL+
Sbjct: 550 YVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYR 609
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLA 461
+M S G P +T VSVL+ACS +G VE+G+ I SM+ I+ IEP +HY C+VD L
Sbjct: 610 KMI--SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLG 667
Query: 462 RSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVV 521
R+G ++ A + + P + +W LL +CR+HG L + AEKL LDP+ S +V+
Sbjct: 668 RAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVL 727
Query: 522 LSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKN 560
LSN +S +W+++ ++ M + K G SW N
Sbjct: 728 LSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGN 766
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 202/471 (42%), Gaps = 84/471 (17%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMY---------------- 52
L+SLL R L G+ +H I+R ++LCN L+++Y
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKS-DTYLCNRLLDLYIECGDGDYARKVFDEM 67
Query: 53 ---------------SKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFV 97
K+ L A V R VV+W ++I+ V G AL+ +
Sbjct: 68 SVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYK 127
Query: 98 NMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTG 157
M D P+ FT V A S + + G + H +A+K G ++FVG + MY+K G
Sbjct: 128 RMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 187
Query: 158 LRVD-ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAF 215
VD +F+ + Q N ++ A I ++ + L+AV F+ +C G + +S+
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFR-LMCEKGVQVDSVCLSNI 246
Query: 216 LNACADRLGL---------HLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
L+ A R G LG+Q+H +R G+ D+ + N L++ Y K D+ +E++
Sbjct: 247 LSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELI 306
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELG 325
F+ + NVV+W M+ Q + +++ + R +P + SVL AC G
Sbjct: 307 FAEM--PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSG 364
Query: 326 GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIG 385
+E GR ++FS +PQ ++ WNAM+
Sbjct: 365 DVETGR-----------------------------------RIFSSIPQPSVSAWNAMLS 389
Query: 386 GYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
GY++ + A+ F +M + + P TL +LS+C+R +E G I
Sbjct: 390 GYSNYEHYEEAISNFRQMQFQN--LKPDKTTLSVILSSCARLRFLEGGKQI 438
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 164/314 (52%), Gaps = 15/314 (4%)
Query: 140 IYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKE 199
+ DV+ + K G +A +FD MP+R++ +WN IS V+ G A+ +K
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 200 FLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGD 259
+C P+ T + L+AC+ L G + H +++G +++ V N L+ Y KCG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 260 IVSSEM-VFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTDFMISSV 317
IV + VF + S+ N V++ +++ L + ++ A +F L K + +S++
Sbjct: 189 IVDYGVRVFESL--SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNI 246
Query: 318 LSACA---------ELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
LS A E+ G ELG+ +H LA++ ++ + ++L+++Y K + AE +
Sbjct: 247 LSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELI 306
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F+EMP+ N+V+WN MI G+ + D ++ M G P+ VT +SVL AC R+G
Sbjct: 307 FAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR--DSGFQPNEVTCISVLGACFRSG 364
Query: 429 AVESGMHIFESMKE 442
VE+G IF S+ +
Sbjct: 365 DVETGRRIFSSIPQ 378
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 128/267 (47%), Gaps = 5/267 (1%)
Query: 2 NFHP-PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNS 60
N P LS +L S R G+ +H +IR+ E S + + LI +YS+ + +
Sbjct: 411 NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT-EISKNSHIVSGLIAVYSECEKMEI 469
Query: 61 AQHVLS-LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ-PNDFTFPCVFKAS 118
++ + + + W S+I+G +N AL+ F M + V PN+ +F V +
Sbjct: 470 SECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 529
Query: 119 SSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWN 178
S L + G+Q H L +K G + D FV + DMY K G AR FD + ++N WN
Sbjct: 530 SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWN 589
Query: 179 AYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIR- 237
I +GR +AVG +++ + +P+ ITF + L AC+ + G ++ + + R
Sbjct: 590 EMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRI 649
Query: 238 SGYREDVSVANGLIDFYGKCGDIVSSE 264
G ++ ++D G+ G + +E
Sbjct: 650 HGIEPELDHYICIVDCLGRAGRLEDAE 676
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 257/487 (52%), Gaps = 19/487 (3%)
Query: 76 WTSLIAGCVNNGRF---VAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA 132
W LI G N F V+ L+ MR +P+++TFP V K S+ G H
Sbjct: 77 WNHLIKGYSNKFLFFETVSILMRM--MRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHG 134
Query: 133 LALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLD 192
L L+ G DV VG S D Y K AR +F EMP+RN +W A + V+ G +
Sbjct: 135 LVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEE 194
Query: 193 AVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLID 252
A F + E N ++ A ++ L ++L + + D+ +ID
Sbjct: 195 AKSMFD----LMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK----RDIISYTSMID 246
Query: 253 FYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ-ARKEAEPTD 311
Y K GD+VS+ +F +V W +++ QN + A VF + K +P +
Sbjct: 247 GYAKGGDMVSARDLFEEA--RGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 312 FMISSVLSACAELGGLELGRSVHA-LAVKACVDENIFVGSALVDLYGKCGSIENAEQVFS 370
F++ ++SAC+++G EL V + L + + +V AL+D+ KCG ++ A ++F
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 371 EMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAV 430
EMPQR++V++ +M+ G A G A+ LFE+M GI P V +L C ++ V
Sbjct: 365 EMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMV--DEGIVPDEVAFTVILKVCGQSRLV 422
Query: 431 ESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLG 490
E G+ FE M++ Y I +HY+C+V+LL+R+G + AYE I++MP S WG+LLG
Sbjct: 423 EEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLG 482
Query: 491 ACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKN 550
C +HG T++ +V A LFEL+P+ +G++V+LSN+ A+ RW + +R +M + GI K
Sbjct: 483 GCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKI 542
Query: 551 VGYSWIA 557
G SWI+
Sbjct: 543 CGRSWIS 549
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/541 (29%), Positives = 282/541 (52%), Gaps = 16/541 (2%)
Query: 28 VHAQIIRSHETPLPSFLCNHL------INMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIA 81
V Q++ H + + C++L I++Y K + A+ + R VV+WT++I+
Sbjct: 27 VKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMIS 86
Query: 82 GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIY 141
G ALL F M R+ V+ N FT+ V K+ L G Q H KG
Sbjct: 87 RFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAG 146
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
++ V + +Y++ G +AR FD M +R+L +WNA I + + + F+ L
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
+P+ TF + L A L + +LH I+ G+ ++ L++ Y KCG +
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALV-QNHEEERACLVFLQA-RKEAEPTDFMISSVLS 319
++ + G +R++++ +++ QN+ A +F R + + + ++SS+L
Sbjct: 267 NAWKLHE--GTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLK 324
Query: 320 ACAELGGLELGRSVHALAVKAC-VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIV 378
C + + +GR +H A+K+ + ++ +G++L+D+Y K G IE+A F EM ++++
Sbjct: 325 ICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVR 384
Query: 379 TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFE 438
+W ++I GY G+ + A+ L+ M I P+ VT +S+LSACS G E G I++
Sbjct: 385 SWTSLIAGYGRHGNFEKAIDLYNRMEHER--IKPNDVTFLSLLSACSHTGQTELGWKIYD 442
Query: 439 SMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP--IHPTISIWGALLGACRMHG 496
+M + IE EH +C++D+LARSG ++ AY I++ + + S WGA L ACR HG
Sbjct: 443 TMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHG 502
Query: 497 KTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIG-IKKNVGYSW 555
+L KVAA +L ++P N++ L+++ A+ G W+ A RK MK+ G K GYS
Sbjct: 503 NVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSL 562
Query: 556 I 556
+
Sbjct: 563 V 563
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 8 LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSL 67
++SS+L+ + S +GR +H ++S + L N LI+MY+K + A
Sbjct: 318 VVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEE 377
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITG 127
+ V +WTSLIAG +G F A+ + M + ++PND TF + A S TG
Sbjct: 378 MKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSH-----TG 432
Query: 128 KQAHALALKGGQIYDVFV---GCSA--------FDMYSKTGLRVDARNMF---DEMPQRN 173
+ G +IYD + G A DM +++G +A + + + +
Sbjct: 433 QTEL-----GWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLS 487
Query: 174 LATWNAYISNAVQDG 188
+TW A++ + G
Sbjct: 488 SSTWGAFLDACRRHG 502
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 284/553 (51%), Gaps = 13/553 (2%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
+L++ R+ G+ +H+ + + ++C L++ Y+K L A V R
Sbjct: 109 VLKACAGLRAIDDGKLIHSHV-NCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKR 167
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRR-DCVQPNDFTFPCVFKASSSLQMPITGKQA 130
+V W ++I+G + + F++MRR D + PN T +F A GK
Sbjct: 168 DMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAV 227
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
H + G D+ V D+Y+K+ + AR +FD ++N TW+A I V++
Sbjct: 228 HGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMI 287
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAF---LNACADRLGLHLGRQLHAFIIRSGYREDVSVA 247
+A F + L V+ +T A L CA L GR +H + +++G+ D++V
Sbjct: 288 KEAGEVFFQML-VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQ 346
Query: 248 NGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA 307
N +I FY K G + + FS IG ++V+++ S++ V N E + +F + R
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGL--KDVISYNSLITGCVVNCRPEESFRLFHEMRTSG 404
Query: 308 -EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
P + VL+AC+ L L G S H V N + +AL+D+Y KCG ++ A+
Sbjct: 405 IRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAK 464
Query: 367 QVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
+VF M +R+IV+WN M+ G+ G AL LF M G+ P VTL+++LSACS
Sbjct: 465 RVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ--ETGVNPDEVTLLAILSACSH 522
Query: 427 AGAVESGMHIFESM-KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIW 485
+G V+ G +F SM + + + P +HY C+ DLLAR+G +D AY+F+ MP P I +
Sbjct: 523 SGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVL 582
Query: 486 GALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDI 545
G LL AC + +LG ++K+ L E + + V+LSN ++A RWE+A +R K
Sbjct: 583 GTLLSACWTYKNAELGNEVSKKMQSLG-ETTESLVLLSNTYSAAERWEDAARIRMIQKKR 641
Query: 546 GIKKNVGYSWIAV 558
G+ K GYSW+ V
Sbjct: 642 GLLKTPGYSWVDV 654
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 231/500 (46%), Gaps = 15/500 (3%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS-LTH 69
SLLE+ + +R+ +LG+ +H +++ T S + +L +Y+ + + A+HV + H
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 70 LR-TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
R + W +I +N AL + M V+P +T+P V KA + L+ GK
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
H+ D++V + D Y+K G A +FDEMP+R++ WNA IS
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 189 RSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVA 247
D +G F + + G PN T A L G+ +H + R G+ D+ V
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 248 NGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQA---R 304
G++D Y K I+ + VF ++N VTW +M+ V+N + A VF Q
Sbjct: 244 TGILDVYAKSKCIIYARRVFDL--DFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 305 KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
A T I +L CA G L GR VH AVKA ++ V + ++ Y K GS+ +
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCD 361
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
A + FSE+ ++++++N++I G + + LF EM + GI P TL+ VL+AC
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR--TSGIRPDITTLLGVLTAC 419
Query: 425 SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
S A+ G ++ ++D+ + G +D A M +S
Sbjct: 420 SHLAALGHGSSC-HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVS- 477
Query: 485 WGALLGACRMHGKTKLGKVA 504
W +L +HG LGK A
Sbjct: 478 WNTMLFGFGIHG---LGKEA 494
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 3/224 (1%)
Query: 212 FCAFLNACADRLGLHLGRQLHAFII-RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI 270
F + L C L LG+ +H ++ RS +V L Y C ++ + VF I
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 271 GRSRRNVVTWCSMLAALVQNHEEERAC-LVFLQARKEAEPTDFMISSVLSACAELGGLEL 329
R N + W M+ A N E+A L + PT + VL ACA L ++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 330 GRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAH 389
G+ +H+ + +++V +ALVD Y KCG +E A +VF EMP+R++V WNAMI G++
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG 433
+ +GLF +M G++P+ T+V + A RAGA+ G
Sbjct: 182 HCCLTDVIGLFLDMRRID-GLSPNLSTIVGMFPALGRAGALREG 224
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 263/537 (48%), Gaps = 21/537 (3%)
Query: 36 HETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVV---------TWTSLIAGCVNN 86
H + S + ++I + +D + ++L++ R+V W S+I G N+
Sbjct: 26 HGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNS 85
Query: 87 GRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVG 146
AL+ + M R P+ FTFP V KA S L+ G H +K G +++V
Sbjct: 86 PNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVS 145
Query: 147 CSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE 206
MY G +F+++PQ N+ W + IS V + R DA+ AF+E +
Sbjct: 146 TCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVK 205
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE--------DVSVANGLIDFYGKCG 258
N L AC + G+ H F+ G+ +V +A LID Y KCG
Sbjct: 206 ANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCG 265
Query: 259 DIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSV 317
D+ ++ +F G R +V+W S++ QN + E A +FL P SV
Sbjct: 266 DLRTARYLFD--GMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSV 323
Query: 318 LSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI 377
+ A G +LG+S+HA K ++ + ALV++Y K G E+A++ F ++ +++
Sbjct: 324 IRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDT 383
Query: 378 VTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIF 437
+ W +I G A G + AL +F+ M P +T + VL ACS G VE G F
Sbjct: 384 IAWTVVIIGLASHGHGNEALSIFQRMQEKG-NATPDGITYLGVLYACSHIGLVEEGQRYF 442
Query: 438 ESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGK 497
M++++ +EP EHY C+VD+L+R+G + A ++ MP+ P ++IWGALL C +H
Sbjct: 443 AEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHEN 502
Query: 498 TKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
+L + E + SG +V+LSN+ A AGRW + ++R+ MK + K +G+S
Sbjct: 503 LELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHS 559
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 20/283 (7%)
Query: 230 QLHAFIIRSGYREDVSVANGLIDFYGKCGDIVS---SEMVFSRIGRSRRNVVTWCSMLAA 286
QLH +I+S +V + LIDF C + ++ + VF I +V W SM+
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCP--SVYIWNSMIRG 81
Query: 287 LVQNHEEERACLVFLQA--RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDE 344
+ ++A L+F Q RK P F VL AC+ L ++ G VH VK +
Sbjct: 82 YSNSPNPDKA-LIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV 140
Query: 345 NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMT 404
N++V + L+ +Y CG + +VF ++PQ N+V W ++I G+ + A+ F EM
Sbjct: 141 NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ 200
Query: 405 LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHY--------ACV 456
S G+ + +V +L AC R + +G F + +P + +
Sbjct: 201 --SNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYFQSKVGFNVILATSL 257
Query: 457 VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
+D+ A+ G + A MP +S W +++ +G +
Sbjct: 258 IDMYAKCGDLRTARYLFDGMPERTLVS-WNSIITGYSQNGDAE 299
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/454 (33%), Positives = 245/454 (53%), Gaps = 37/454 (8%)
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE-PNSITFCAFLNACA 220
A +F+++ N+ +N+ I + D + +K+ L E P+ TF +CA
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 221 DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTW 280
+LG+Q+H + + G R V N LID Y K D+V + VF + R+V++W
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM--YERDVISW 178
Query: 281 CSMLAALVQNHEEERA--------------------------CLV----FLQARKEA--E 308
S+L+ + + ++A C V F + + A E
Sbjct: 179 NSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE 238
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P + + SVL +CA+LG LELG+ +H A + + V +AL+++Y KCG I A Q+
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F +M +++++W+ MI GYA+ G+ A+ F EM + P+ +T + +LSACS G
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQ--RAKVKPNGITFLGLLSACSHVG 356
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGAL 488
+ G+ F+ M++ Y+IEP EHY C++D+LAR+G ++RA E + MP+ P IWG+L
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416
Query: 489 LGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIK 548
L +CR G + VA + L EL+PED GN+V+L+N+ A G+WE+ + +RK +++ +K
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 549 KNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAML 582
K G S I V N V F + D+S +EI +L
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVL 510
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 183/407 (44%), Gaps = 38/407 (9%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVN 85
+ ++A II H SF+ +++ K++ ++ A + + V + S+I +
Sbjct: 27 KKINASII-IHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTH 85
Query: 86 NGRFVAALLHFVNMRRDCVQ-PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
N + + + + R + P+ FTFP +FK+ +SL GKQ H K G + V
Sbjct: 86 NSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVV 145
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR--------------- 189
+ DMY K VDA +FDEM +R++ +WN+ +S + G+
Sbjct: 146 TENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKT 205
Query: 190 ----------------SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHA 233
++A+ F+E EP+ I+ + L +CA L LG+ +H
Sbjct: 206 IVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHL 265
Query: 234 FIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEE 293
+ R G+ + V N LI+ Y KCG I + +F ++ ++V++W +M++ +
Sbjct: 266 YAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM--EGKDVISWSTMISGYAYHGNA 323
Query: 294 ERACLVFLQ-ARKEAEPTDFMISSVLSACAELGGLELG-RSVHALAVKACVDENIFVGSA 351
A F + R + +P +LSAC+ +G + G R + ++ I
Sbjct: 324 HGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGC 383
Query: 352 LVDLYGKCGSIENAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMAL 397
L+D+ + G +E A ++ MP + + W +++ G++D+AL
Sbjct: 384 LIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
L S+L S S LG+ +H R + +CN LI MYSK +++ A +
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLK-QTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
+ V++W+++I+G +G A+ F M+R V+PN TF + A S + M G
Sbjct: 303 EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGL 362
Query: 129 QAHALALKGGQIYDVF--VGCSAFDMYSKTGLRVDARNMFDEMPQR-NLATWNAYISNAV 185
+ + + QI GC D+ ++ G A + MP + + W + +S+
Sbjct: 363 RYFDMMRQDYQIEPKIEHYGC-LIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCR 421
Query: 186 QDG 188
G
Sbjct: 422 TPG 424
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 296/574 (51%), Gaps = 19/574 (3%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
G +H +IRS + S + N ++ MY+ D L SA+ + R V++W+ +I V
Sbjct: 144 GEKIHGYVIRSGFCGISS-VQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYV 201
Query: 85 NNGRFVAALLHFVNMRRDC-VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGG-QIYD 142
+ V L F M + +P+ T V KA + ++ G+ H +++ G + D
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 143 VFVGCSAFDMYSKTGLRVD-ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
VFV S DMYSK G VD A +FDE RN+ +WN+ ++ V + R +A+ F +
Sbjct: 262 VFVCNSLIDMYSK-GFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
E + +T + L C + +H IIR GY + + LID Y C +
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSAC 321
+ V + + ++VV+ +M++ L + A +F R P + S+L+AC
Sbjct: 381 DAGTVLDSM--TYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT--PNAITVISLLNAC 436
Query: 322 AELGGLELGRSVHALAVKACVDEN-IFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
+ L + H +A++ + N I VG+++VD Y KCG+IE A + F ++ ++NI++W
Sbjct: 437 SVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISW 496
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
+I YA G D AL LF+EM G P+ VT ++ LSAC+ G V+ G+ IF+SM
Sbjct: 497 TVIISAYAINGLPDKALALFDEMKQK--GYTPNAVTYLAALSACNHGGLVKKGLMIFKSM 554
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP--IHPTISIWGALLGACRMHGKT 498
E +P +HY+C+VD+L+R+G +D A E I+N+P + S WGA+L CR K
Sbjct: 555 VEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKK 613
Query: 499 KL--GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWI 556
+ +V AE L EL+P S +++ S+ A+ WE+ ++R+ +K+ ++ GYS +
Sbjct: 614 LIITSEVVAEVL-ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672
Query: 557 AVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK 590
N F A D + +SE+ ++ L MK
Sbjct: 673 REGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMK 706
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 145/547 (26%), Positives = 236/547 (43%), Gaps = 62/547 (11%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD 102
F N + + Y K L S + R V+W ++ G ++ G L F +R
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 103 CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDA 162
+PN T V A SL G++ H ++ G V S MY+ + + A
Sbjct: 122 GFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSD-SLSA 178
Query: 163 RNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH---GEPNSITFCAFLNAC 219
R +FDEM +R++ +W+ I + VQ + + FKE VH EP+ +T + L AC
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEM--VHEAKTEPDCVTVTSVLKAC 236
Query: 220 ADRLGLHLGRQLHAFIIRSGYR-EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV 278
+ +GR +H F IR G+ DV V N LID Y K D+ S+ VF + RN+V
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDET--TCRNIV 294
Query: 279 TWCSMLAALVQNHEEERACLVF-LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALA 337
+W S+LA V N + A +F L ++ E + + S+L C +S+H +
Sbjct: 295 SWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Query: 338 VKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMAL 397
++ + N S+L+D Y C +++A V M +++V+ + MI G AH G D A+
Sbjct: 355 IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAI 414
Query: 398 GLFEEMTLGSCGIAPSYVTLVSVLSACS-------------------------------- 425
+F M P+ +T++S+L+ACS
Sbjct: 415 SIFCHMR-----DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV 469
Query: 426 ----RAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP---I 478
+ GA+E F+ + E I + ++ A +GL D+A M
Sbjct: 470 DAYAKCGAIEMARRTFDQITEKNIIS-----WTVIISAYAINGLPDKALALFDEMKQKGY 524
Query: 479 HPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHV-VLSNMLASAGRWEEATI 537
P + A L AC G K G + + + E D + S H + +ML+ AG + A
Sbjct: 525 TPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVE 584
Query: 538 VRKEMKD 544
+ K + +
Sbjct: 585 LIKNLPE 591
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 183/383 (47%), Gaps = 10/383 (2%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
++S+L++ +GR+VH IR F+CN LI+MYSK ++SA V T
Sbjct: 229 VTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDET 288
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
R +V+W S++AG V+N R+ AL F M ++ V+ ++ T + + + P+ K
Sbjct: 289 TCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCK 348
Query: 129 QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG 188
H + ++ G + S D Y+ L DA + D M +++ + + IS G
Sbjct: 349 SIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAG 408
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYR-EDVSVA 247
RS +A+ F + PN+IT + LNAC+ L + H IR D+SV
Sbjct: 409 RSDEAISIFCH---MRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVG 465
Query: 248 NGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA 307
++D Y KCG I + F +I + +N+++W +++A N ++A +F + +++
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQI--TEKNIISWTVIISAYAINGLPDKALALFDEMKQKG 523
Query: 308 -EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
P + LSAC G ++ G + V+ ++ S +VD+ + G I+ A
Sbjct: 524 YTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAV 583
Query: 367 QVFSEMPQR---NIVTWNAMIGG 386
++ +P+ W A++ G
Sbjct: 584 ELIKNLPEDVKAGASAWGAILSG 606
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 145/550 (26%), Positives = 238/550 (43%), Gaps = 82/550 (14%)
Query: 86 NGRFVAALLHFVNMRRDCVQPND-FTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
+G++ + + ++R VQ ND F FP VFKA + L +F
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSW-------------------LF 62
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
G S D Y K G FD M R+ +WN + + G + + F +
Sbjct: 63 QGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 205 GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSE 264
EPN+ T ++AC R G ++H ++IRSG+ SV N ++ Y D +S+
Sbjct: 123 FEPNTSTLVLVIHAC--RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSAR 179
Query: 265 MVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA--EPTDFMISSVLSACA 322
+F + S R+V++W ++ + VQ+ E +F + EA EP ++SVL AC
Sbjct: 180 KLFDEM--SERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 323 ELGGLELGRSVHALAVKACVD-ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWN 381
+ +++GRSVH +++ D ++FV ++L+D+Y K +++A +VF E RNIV+WN
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 382 AMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC----------SRAGAV- 430
+++ G+ H D AL +F M + + VT+VS+L C S G +
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEA--VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 431 ----ESGMHIFESMKEIYRIEPGAEHYACVVDL---------------LARSGLVDRAYE 471
ES S+ + Y + V+D LA +G D A
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 472 FIQNMPIHPTISIWGALLGACRMHGKTKLGK----VAAEKLFELDPEDSGNHVVLSNMLA 527
+M P +LL AC + + K +A + ++ G +V + A
Sbjct: 416 IFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV--DAYA 473
Query: 528 SAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLRE 587
G E A R+ I +KN+ SW + S++ N LA L +
Sbjct: 474 KCGAIEMA---RRTFDQI-TEKNI-ISWTVII----------SAYAINGLPDKALA-LFD 517
Query: 588 EMKKAGYFPD 597
EMK+ GY P+
Sbjct: 518 EMKQKGYTPN 527
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 181/608 (29%), Positives = 304/608 (50%), Gaps = 54/608 (8%)
Query: 26 RAVHAQIIRSH----ETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIA 81
+ V AQI+R + P+ + I LDL + L+ T V + ++I+
Sbjct: 51 KQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDL--AKLLFLNFTPNPNVFVYNTMIS 108
Query: 82 GCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA-LALKGGQI 140
++ L + +M R V P+ TF + KASS L KQ H + + G
Sbjct: 109 AVSSSKNECFGL--YSSMIRHRVSPDRQTFLYLMKASSFLS---EVKQIHCHIIVSGCLS 163
Query: 141 YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEF 200
++ S Y + G A +F MP +++++N I + G SL+A+ + +
Sbjct: 164 LGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM 223
Query: 201 LCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSG--YREDVSVANGLIDFYGKC- 257
+ EP+ T + L C + LG+ +H +I R G Y ++ ++N L+D Y KC
Sbjct: 224 VSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCK 283
Query: 258 ------------------------------GDIVSSEMVFSRIGRSRRNVVTWCSMLAAL 287
GD+ +++ VF ++ +R++V+W S+L
Sbjct: 284 ESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQM--PKRDLVSWNSLLFGY 341
Query: 288 VQNHEEERAC---LVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDE 344
+ ++R + ++ +P + S++S A G L GR VH L ++ +
Sbjct: 342 SKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKG 401
Query: 345 NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMT 404
+ F+ SAL+D+Y KCG IE A VF ++++ W +MI G A G+ AL LF M
Sbjct: 402 DAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQ 461
Query: 405 LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSG 464
G+ P+ VTL++VL+ACS +G VE G+H+F MK+ + +P EHY +VDLL R+G
Sbjct: 462 --EEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAG 519
Query: 465 LVDRAYEFIQN-MPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLS 523
V+ A + +Q MP+ P+ S+WG++L ACR + ++A +L +L+PE G +V+LS
Sbjct: 520 RVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLS 579
Query: 524 NMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVF-QAKDSSHEKNSEIQAML 582
N+ A+ GRW + R+ M++ G+KK GYS + +H F A+ +H + +EI+ +L
Sbjct: 580 NIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRIL 639
Query: 583 AKLREEMK 590
L EMK
Sbjct: 640 QHLYNEMK 647
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
+ SL+ A + GR VH +IR + +FL + LI+MY K ++ A V
Sbjct: 371 MVSLISGAANNGELSHGRWVHGLVIRL-QLKGDAFLSSALIDMYCKCGIIERAFMVFKTA 429
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASS 119
+ V WTS+I G +G AL F M+ + V PN+ T V A S
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS 480
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 262/520 (50%), Gaps = 16/520 (3%)
Query: 78 SLIAGCVNNGRFVAALLHFVNMRRD-CVQPNDFTFPCVFKASSSLQMPITGKQAHALALK 136
S+I + ++ + + ++R++ C P++FTF + K+ S G Q H+ +
Sbjct: 47 SMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWR 106
Query: 137 GGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGA 196
G D++V DMY+K G ARN FDEMP R+ +W A IS ++ G A
Sbjct: 107 FGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKL 166
Query: 197 FKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGK 256
F + V + + + A ++ + R+L + + V +I Y
Sbjct: 167 FDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDEMTH----KTVITWTTMIHGYCN 219
Query: 257 CGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPTDFMI 314
DI ++ +F + RN+V+W +M+ QN + + +F +QA +P D I
Sbjct: 220 IKDIDAARKLFDAM--PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTI 277
Query: 315 SSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ 374
SVL A ++ G L LG H + +D+ + V +A++D+Y KCG IE A+++F EMP+
Sbjct: 278 LSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE 337
Query: 375 RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGM 434
+ + +WNAMI GYA G+ AL LF M + P +T+++V++AC+ G VE G
Sbjct: 338 KQVASWNAMIHGYALNGNARAALDLFVTMMIEE---KPDEITMLAVITACNHGGLVEEGR 394
Query: 435 HIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRM 494
F M+E+ + EHY C+VDLL R+G + A + I NMP P I + L AC
Sbjct: 395 KWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQ 453
Query: 495 HGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
+ + + +K EL+P++ GN+V+L N+ A+ RW++ +V+ M+ KK VG S
Sbjct: 454 YKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCS 513
Query: 555 WIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGY 594
I + V F + D++H I +L L M + Y
Sbjct: 514 LIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/501 (22%), Positives = 207/501 (41%), Gaps = 35/501 (6%)
Query: 3 FHPPNL-LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA 61
F P N ++L +S + G +H+QI R ++ +++MY+K + A
Sbjct: 74 FAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCA-DMYVSTGVVDMYAKFGKMGCA 132
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMR--RDCVQPNDFTFPCVFKASS 119
++ R+ V+WT+LI+G + G A F M +D V N V
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDM 192
Query: 120 SLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNA 179
+ + + H + + + D AR +FD MP+RNL +WN
Sbjct: 193 TSARRLFDEMTHKTVITWTTMIHGYCNIKDIDA---------ARKLFDAMPERNLVSWNT 243
Query: 180 YISNAVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRS 238
I Q+ + + + F+E +P+ +T + L A +D L LG H F+ R
Sbjct: 244 MIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK 303
Query: 239 GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACL 298
+ V V ++D Y KCG+I ++ +F + + V +W +M+ N A
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEM--PEKQVASWNAMIHGYALNGNARAALD 361
Query: 299 VFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGK 358
+F+ E +P + + +V++AC G +E GR + + ++ I +VDL G+
Sbjct: 362 LFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGR 421
Query: 359 CGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTL 417
GS++ AE + + MP + N + ++ + D++ A + ++ +YV L
Sbjct: 422 AGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLL 481
Query: 418 VSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAY---EFIQ 474
++ +A R F +K + R + C L++ Y EFI
Sbjct: 482 RNLYAADKRWDD-------FGMVKNVMRKNQAKKEVGC--------SLIEINYIVSEFIS 526
Query: 475 NMPIHPTISIWGALLGACRMH 495
HP +LG MH
Sbjct: 527 GDTTHPHRRSIHLVLGDLLMH 547
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 176/368 (47%), Gaps = 28/368 (7%)
Query: 139 QIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATW-NAYISNAVQDGRSLDAVGAF 197
QI+ F+ SA S G+ AR +FD+ PQR+ + N+ I ++ + D+ +
Sbjct: 11 QIFTKFLVISA----SAVGIGY-ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALY 65
Query: 198 KEF---LCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFY 254
++ C P++ TF +C+ + ++ G QLH+ I R G+ D+ V+ G++D Y
Sbjct: 66 RDLRKETCF--APDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMY 123
Query: 255 GKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMI 314
K G + + F + R+ V+W ++++ ++ E + A +F Q D +I
Sbjct: 124 AKFGKMGCARNAFDEM--PHRSEVSWTALISGYIRCGELDLASKLFDQM---PHVKDVVI 178
Query: 315 -SSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP 373
++++ + G + R + + + + ++ Y I+ A ++F MP
Sbjct: 179 YNAMMDGFVKSGDMTSARRL----FDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 374 QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG 433
+RN+V+WN MIGGY + LF+EM + + P VT++SVL A S GA+ G
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ-ATTSLDPDDVTILSVLPAISDTGALSLG 293
Query: 434 --MHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGA 491
H F K +++ + ++D+ ++ G +++A MP ++ W A++
Sbjct: 294 EWCHCFVQRK---KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHG 349
Query: 492 CRMHGKTK 499
++G +
Sbjct: 350 YALNGNAR 357
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 267/540 (49%), Gaps = 30/540 (5%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
GRAVH +R + N +I+MY K L A+ + T R +V+W S+I+
Sbjct: 412 GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFS 471
Query: 85 NNGRFVAA--LLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYD 142
NG A L V C + + T + + S I GK H K G +
Sbjct: 472 QNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTS 531
Query: 143 VFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLC 202
F LR++ + R+L +WN+ IS G L+++ AF+ +
Sbjct: 532 AF-------------LRLETMS-----ETRDLTSWNSVISGCASSGHHLESLRAFQA-MS 572
Query: 203 VHGE--PNSITFCAFLNACADRLGLHL-GRQLHAFIIRSGYREDVSVANGLIDFYGKCGD 259
G+ + IT ++A + LGL L GR H I+S D + N LI YG+C D
Sbjct: 573 REGKIRHDLITLLGTISASGN-LGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKD 631
Query: 260 IVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLS 319
I S+ VF I S N+ +W +++AL QN +F + EP + +LS
Sbjct: 632 IESAVKVFGLI--SDPNLCSWNCVISALSQNKAGREVFQLFRNLK--LEPNEITFVGLLS 687
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVT 379
A +LG G H ++ N FV +ALVD+Y CG +E +VF +I
Sbjct: 688 ASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISA 747
Query: 380 WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFES 439
WN++I + G + A+ LF+E++ S + P+ + +S+LSACS +G ++ G+ ++
Sbjct: 748 WNSVISAHGFHGMGEKAMELFKELSSNS-EMEPNKSSFISLLSACSHSGFIDEGLSYYKQ 806
Query: 440 MKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
M+E + ++P EH +VD+L R+G + AYEFI + +WGALL AC HG TK
Sbjct: 807 MEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTK 866
Query: 500 LGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVK 559
LGK AE LFE++P+++ ++ L+N G WEEA +RK ++D +KK GYS I V+
Sbjct: 867 LGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 193/391 (49%), Gaps = 13/391 (3%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
L+ Y + L S+ + + V+ W S+I NGR++AA+ F+ M + N
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIH---KGN 184
Query: 108 DFTFPCVFKASSSLQMPITGKQA---HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARN 164
+F + A+S+L ++ H LA++ G + D + + ++Y+K A
Sbjct: 185 EFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAEC 244
Query: 165 MFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG 224
+F M R++ +WN ++ + +G ++ FK E +++TF ++AC+
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE 304
Query: 225 LHLGRQLHAFIIRSGYRED--VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
L LG LH +I+SGY + VSV N +I Y KCGD ++E VF + R+V++ +
Sbjct: 305 LTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL--VCRDVISSNA 362
Query: 283 MLAALVQN--HEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKA 340
+L N EE L +Q+ + +P + S+ S C +L GR+VH V+
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRM 422
Query: 341 CVDENIF-VGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGL 399
+ V ++++D+YGKCG AE +F R++V+WN+MI ++ G A L
Sbjct: 423 EMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
Query: 400 FEEMTLGSCGIAPSYVTLVSVLSACSRAGAV 430
F+E+ S T++++L++C + ++
Sbjct: 483 FKEVVSEYSCSKFSLSTVLAILTSCDSSDSL 513
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 198/411 (48%), Gaps = 22/411 (5%)
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
T + H ALK G + D+ Y +TG V + +FDE+ ++++ WN+ I+
Sbjct: 105 TPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALN 164
Query: 186 QDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
Q+GR + AVG F E + E +S T +A + LH I +G D S
Sbjct: 165 QNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSS 224
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK 305
+ N L++ Y K ++ S+E VF+ + R++V+W +++ + N ++ F
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHM--EHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 306 EAEPTDFM-ISSVLSACAELGGLELGRSVHALAVKA--CVDENIFVGSALVDLYGKCGSI 362
+ D + S V+SAC+ + L LG S+H L +K+ + ++ VG++++ +Y KCG
Sbjct: 283 SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 363 ENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLS 422
E AE VF E+ R++++ NA++ G+A G + A G+ +M I P T+VS+ S
Sbjct: 343 EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ-SVDKIQPDIATVVSITS 401
Query: 423 AC-----SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP 477
C SR G G + M+ E V+D+ + GL +A E +
Sbjct: 402 ICGDLSFSREGRAVHGYTVRMEMQ-----SRALEVINSVIDMYGKCGLTTQA-ELLFKTT 455
Query: 478 IHPTISIWGALLGACRMHGKTKLGKVAAEKLF-ELDPEDSGNHVVLSNMLA 527
H + W +++ A +G T A+ LF E+ E S + LS +LA
Sbjct: 456 THRDLVSWNSMISAFSQNGFTH----KAKNLFKEVVSEYSCSKFSLSTVLA 502
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 235/538 (43%), Gaps = 65/538 (12%)
Query: 42 SFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
S LCN L+N+Y+K + L+SA+ V + R +V+W +++ C+ NG +L +F +M
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYD--VFVGCSAFDMYSKTGLR 159
+ + TF CV A SS++ G+ H L +K G + V VG S MYSK G
Sbjct: 283 SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 160 VDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNA 218
A +F+E+ R++ + NA ++ +G +A G + V +P+ T + +
Sbjct: 343 EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSI 402
Query: 219 CADRLGLHLGRQLHAFIIRSGYRED-VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNV 277
C D GR +H + +R + + V N +ID YGKCG +E++F + R++
Sbjct: 403 CGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTT--THRDL 460
Query: 278 VTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSV---LSACAELGGLELGRSVH 334
V+W SM++A QN +A +F + E + F +S+V L++C L G+SVH
Sbjct: 461 VSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVH 520
Query: 335 ALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVD 394
K L DL +E + R++ +WN++I G A G
Sbjct: 521 CWLQK------------LGDLTSAFLRLETMSET------RDLTSWNSVISGCASSGHHL 562
Query: 395 MALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI------------------ 436
+L F+ M+ I +TL+ +SA G V G
Sbjct: 563 ESLRAFQAMSREG-KIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 437 ----------FESMKEIYRI--EPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
ES +++ + +P + CV+ L+++ ++ +N+ + P
Sbjct: 622 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEIT 681
Query: 485 WGALLGACRMHGKTKLGKVAAEKL----FELDPEDSGNHVVLSNMLASAGRWEEATIV 538
+ LL A G T G A L F+ +P S L +M +S G E V
Sbjct: 682 FVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSA---ALVDMYSSCGMLETGMKV 736
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 328 ELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGY 387
E RSVH A+K + +++ S L+ YG+ G + ++ +F E+ +++++ WN+MI
Sbjct: 104 ETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITAL 163
Query: 388 AHQGDVDMALGLFEEM 403
G A+GLF EM
Sbjct: 164 NQNGRYIAAVGLFIEM 179
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 188/644 (29%), Positives = 296/644 (45%), Gaps = 103/644 (15%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVL--- 65
L S L S S+ GR +H ++++S ++CN ++NMY+K LL A+ V
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDS-NGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 66 ----------------------------SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFV 97
+ R+ V++T+LI G N ++ A+ F
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 98 NMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTG 157
MR + N+ T V A S L + +LA+K VFV + MY
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 158 LRVDARNMFDEMPQRNLATWNAYISNAVQDG----------------------------- 188
DAR +FDEMP+RNL TWN ++ + G
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLR 282
Query: 189 -RSLD-AVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY------ 240
LD A+ + E L +P+ + L+A A +G G QLH I++ G+
Sbjct: 283 KNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFL 342
Query: 241 -------------------------REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR 275
++ ++ N LI + K G + + VF + +
Sbjct: 343 QATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT--HDK 400
Query: 276 NVVTWCSMLAALVQNHEEERACLVFLQ--ARKEAEPTDFMISSVLSACAELGGLELGRSV 333
++ +W +M++ Q+ + A +F + + + +P + SV SA + LG LE G+
Sbjct: 401 DIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRA 460
Query: 334 HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSE---MPQRNIVTWNAMIGGYAHQ 390
H + + N + +A++D+Y KCGSIE A +F + + I WNA+I G A
Sbjct: 461 HDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATH 520
Query: 391 GDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGA 450
G +AL L+ + L S I P+ +T V VLSAC AG VE G FESMK + IEP
Sbjct: 521 GHAKLALDLYSD--LQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDI 578
Query: 451 EHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE 510
+HY C+VDLL ++G ++ A E I+ MP+ + IWG LL A R HG ++ ++AA +L
Sbjct: 579 KHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAA 638
Query: 511 LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
+DP G V+LSN+ A AGRWE+ +VR+EM+ ++ + +S
Sbjct: 639 IDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFS 682
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 55/308 (17%)
Query: 287 LVQNHEEERACLVFLQAR-------------KEAEPTDFMISSVLSACAELGGLELGRSV 333
L++ R ++ LQAR E+ T+ + S L +CA + GR +
Sbjct: 4 LIRFFRSRRCWVISLQARCFSAPSRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQI 63
Query: 334 HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSE---------------------- 371
H +K+ +D N ++ ++++++Y KC + +AE VF +
Sbjct: 64 HCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRL 123
Query: 372 ---------MPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLS 422
MP+R+ V++ +I GYA A+ LF EM + GI + VTL +V+S
Sbjct: 124 WDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR--NLGIMLNEVTLATVIS 181
Query: 423 ACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTI 482
ACS G + + +S+ ++E ++ + + A + MP +
Sbjct: 182 ACSHLGGIWD-CRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLV 240
Query: 483 SIWGALLGACRMHGKTKLGKV-AAEKLF-ELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
+ W +L +G +K G + AE+LF ++ +D + + + + +EA +
Sbjct: 241 T-WNVML-----NGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYT 294
Query: 541 EMKDIGIK 548
EM G+K
Sbjct: 295 EMLRCGMK 302
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 258/527 (48%), Gaps = 24/527 (4%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVN-----NGRFVAALLHFV 97
FL N L+ Y+K+ + A + LR +VTW LI G + N R +
Sbjct: 72 FLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLS 131
Query: 98 NMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTG 157
+ V + +F + + + G Q H L +K G F S Y K G
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 158 LRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSI-----TF 212
L V+AR +F+ + R+L WNA +S+ V +G +A G K + + N TF
Sbjct: 192 LIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK---LMGSDKNRFRGDYFTF 248
Query: 213 CAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR 272
+ L+AC + G+Q+HA + + Y+ D+ VA L++ Y K + + F +
Sbjct: 249 SSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM-- 302
Query: 273 SRRNVVTWCSMLAALVQNHEEERACLVFLQARKE-AEPTDFMISSVLSACAELGGLELGR 331
RNVV+W +M+ QN E A +F Q E +P + +SVLS+CA+ + +
Sbjct: 303 VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIK 362
Query: 332 SVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQG 391
V A+ K + + V ++L+ Y + G++ A F + + ++V+W ++IG A G
Sbjct: 363 QVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHG 422
Query: 392 DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAE 451
+ +L +FE M + P +T + VLSACS G V+ G+ F+ M E Y+IE E
Sbjct: 423 FAEESLQMFESMLQK---LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDE 479
Query: 452 HYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFEL 511
HY C++DLL R+G +D A + + +MP P+ A G C +H K + K A+KL E+
Sbjct: 480 HYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEI 539
Query: 512 DPEDSGNHVVLSNMLASAGRWEEATIVRK-EMKDIGIKKNVGYSWIA 557
+P N+ +LSN S G W +A ++RK E ++ K G SW+
Sbjct: 540 EPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWLG 586
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 212/475 (44%), Gaps = 62/475 (13%)
Query: 116 KASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLA 175
K S+SL KQ H +K G +F+ Y+K DA +FDEMP RN+
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 176 TWNAYISNAVQ-DG----RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQ 230
TWN I +Q DG R+ L + ++F + C D + G Q
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 231 LHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQN 290
LH +++ G + L+ FYGKCG IV + VF + R++V W +++++ V N
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV--LDRDLVLWNALVSSYVLN 221
Query: 291 H--EEERACLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIF 347
+E L + + K D F SS+LSAC +E G+ +HA+ K +I
Sbjct: 222 GMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIP 277
Query: 348 VGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGS 407
V +AL+++Y K + +A + F M RN+V+WNAMI G+A G+ A+ LF +M L +
Sbjct: 278 VATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN 337
Query: 408 CGIAPSYVTLVSVLSAC-----------------------------------SRAGAVES 432
+ P +T SVLS+C SR G +
Sbjct: 338 --LQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSE 395
Query: 433 GMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM--PIHPTISIWGALLG 490
+ F S++ EP + V+ LA G + + + ++M + P + +L
Sbjct: 396 ALLCFHSIR-----EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLS 450
Query: 491 ACRMHGKTKLGKVAAEKL---FELDPEDSGNHVVLSNMLASAGRWEEATIVRKEM 542
AC G + G +++ ++++ ED ++ L ++L AG +EA+ V M
Sbjct: 451 ACSHGGLVQEGLRCFKRMTEFYKIEAEDE-HYTCLIDLLGRAGFIDEASDVLNSM 504
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 225/410 (54%), Gaps = 21/410 (5%)
Query: 182 SNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYR 241
S+ +DG S DA G + + +C G H ++ G+
Sbjct: 109 SSVKRDGWSFDAYG----------------LSSAVRSCGLNRDFRTGSGFHCLALKGGFI 152
Query: 242 EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFL 301
DV + + L+ Y G++ ++ VF + RNVV+W +M++ Q + ++
Sbjct: 153 SDVYLGSSLVVLYRDSGEVENAYKVFEEM--PERNVVSWTAMISGFAQEWRVDICLKLYS 210
Query: 302 QARKE-AEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
+ RK ++P D+ +++LSAC G L GRSVH + + + + ++L+ +Y KCG
Sbjct: 211 KMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCG 270
Query: 361 SIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
+++A ++F + +++V+WN+MI GYA G A+ LFE M S G P +T + V
Sbjct: 271 DLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKS-GTKPDAITYLGV 329
Query: 421 LSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHP 480
LS+C AG V+ G F M E + ++P HY+C+VDLL R GL+ A E I+NMP+ P
Sbjct: 330 LSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKP 388
Query: 481 TISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRK 540
IWG+LL +CR+HG G AAE+ L+P+ + HV L+N+ AS G W+EA VRK
Sbjct: 389 NSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRK 448
Query: 541 EMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK 590
MKD G+K N G SWI + N V +F+A+D S+ + EI +L L + M+
Sbjct: 449 LMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHME 498
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 150/301 (49%), Gaps = 5/301 (1%)
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
TG H LALKGG I DV++G S +Y +G +A +F+EMP+RN+ +W A IS
Sbjct: 138 TGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFA 197
Query: 186 QDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
Q+ R + + + +PN TF A L+AC L GR +H + G + +
Sbjct: 198 QEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLH 257
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQA 303
++N LI Y KCGD+ + +F + S ++VV+W SM+A Q+ +A +F +
Sbjct: 258 ISNSLISMYCKCGDLKDAFRIFDQF--SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMP 315
Query: 304 RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
+ +P VLS+C G ++ GR L + + + S LVDL G+ G ++
Sbjct: 316 KSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQ 375
Query: 364 NAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLS 422
A ++ MP + N V W +++ GDV + EE + A ++V L ++ +
Sbjct: 376 EALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYA 435
Query: 423 A 423
+
Sbjct: 436 S 436
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 2/243 (0%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD 102
+L + L+ +Y + +A V R VV+WT++I+G R L + MR+
Sbjct: 156 YLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKS 215
Query: 103 CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDA 162
PND+TF + A + G+ H L G + + S MY K G DA
Sbjct: 216 TSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDA 275
Query: 163 RNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACAD 221
+FD+ +++ +WN+ I+ Q G ++ A+ F+ + G +P++IT+ L++C
Sbjct: 276 FRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRH 335
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWC 281
+ GR+ + G + +++ + L+D G+ G + + + + + N V W
Sbjct: 336 AGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPM-KPNSVIWG 394
Query: 282 SML 284
S+L
Sbjct: 395 SLL 397
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 209/354 (59%), Gaps = 8/354 (2%)
Query: 241 REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF 300
+ DV V N +I Y + GD+ ++ +F + R+NV +W ++++ QN A +F
Sbjct: 145 KRDVPVWNAMITGYQRRGDMKAAMELFDSM--PRKNVTSWTTVISGFSQNGNYSEALKMF 202
Query: 301 L--QARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGK 358
L + K +P + SVL ACA LG LE+GR + A + +NI+V +A +++Y K
Sbjct: 203 LCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSK 262
Query: 359 CGSIENAEQVFSEM-PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTL 417
CG I+ A+++F E+ QRN+ +WN+MIG A G D AL LF +M G P VT
Sbjct: 263 CGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLRE--GEKPDAVTF 320
Query: 418 VSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP 477
V +L AC G V G +F+SM+E+++I P EHY C++DLL R G + AY+ I+ MP
Sbjct: 321 VGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMP 380
Query: 478 IHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATI 537
+ P +WG LLGAC HG ++ ++A+E LF+L+P + GN V++SN+ A+ +W+
Sbjct: 381 MKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLR 440
Query: 538 VRKEMKDIGIKKNVGYSW-IAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMK 590
+RK MK + K GYS+ + V VH F +D SH ++ EI +L ++ MK
Sbjct: 441 MRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 137/268 (51%), Gaps = 23/268 (8%)
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
DV V + Y + G A +FD MP++N+ +W IS Q+G +A+ K FL
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEAL---KMFL 203
Query: 202 CVHGE----PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKC 257
C+ + PN IT + L ACA+ L +GR+L + +G+ +++ V N I+ Y KC
Sbjct: 204 CMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKC 263
Query: 258 GDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE-PTDFMISS 316
G I ++ +F +G ++RN+ +W SM+ +L + + + A +F Q +E E P
Sbjct: 264 GMIDVAKRLFEELG-NQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVG 322
Query: 317 VLSACAELG----GLELGRS---VHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVF 369
+L AC G G EL +S VH ++ K + ++DL G+ G ++ A +
Sbjct: 323 LLLACVHGGMVVKGQELFKSMEEVHKISPK------LEHYGCMIDLLGRVGKLQEAYDLI 376
Query: 370 SEMPQR-NIVTWNAMIGGYAHQGDVDMA 396
MP + + V W ++G + G+V++A
Sbjct: 377 KTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD-CV 104
N +I Y + + +A + + V +WT++I+G NG + AL F+ M +D V
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 105 QPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARN 164
+PN T V A ++L G++ A + G +++V + +MYSK G+ A+
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 165 MFDEM-PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNAC 219
+F+E+ QRNL +WN+ I + G+ +A+ F + L +P+++TF L AC
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 135/307 (43%), Gaps = 52/307 (16%)
Query: 229 RQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSR-IGRSRRNVVTWC--SMLA 285
+QLHA +R+G E + L+ + +V++R + +N T+ ++
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLL---------LIPNLVYARKLFDHHQNSCTFLYNKLIQ 55
Query: 286 ALVQNHEEERACLVF-LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDE 344
A +H+ + +++ L + P+ + + +A A R +H+ ++ +
Sbjct: 56 AYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFES 115
Query: 345 NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMT 404
+ F + L+ Y K G++ A +VF EM +R++ WNAMI GY +GD+ A+ LF+ M
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 405 LGSC------------------------------GIAPSYVTLVSVLSACSRAGAVESGM 434
+ + P+++T+VSVL AC+ G +E G
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 435 HIFESMKEIYRIEPG--AEHYAC--VVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLG 490
+ E Y E G Y C +++ ++ G++D A + + + W +++G
Sbjct: 236 RL-----EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIG 290
Query: 491 ACRMHGK 497
+ HGK
Sbjct: 291 SLATHGK 297
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 279/583 (47%), Gaps = 87/583 (14%)
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNM-RRDCVQPNDFTFPCVFKASSSLQMPITGKQ 129
R VV+W +L+ G + NG A F M RD V N A + G +
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWN---------AMIKGYIENDGME 217
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR 189
L +V S Y + G +A +F EMP+RN+ +W A IS +
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNEL 277
Query: 190 SLDAVGAFKEFL--CVHGEPNSITFCAFLNACADRLGLH---LGRQLHAFIIRSGYRE-- 242
+A+ F E PN T + AC LG+ LG QLHA +I +G+
Sbjct: 278 YREALMLFLEMKKDVDAVSPNGETLISLAYACGG-LGVEFRRLGEQLHAQVISNGWETVD 336
Query: 243 ------------------------------DVSVANGLIDFYGKCGDIVSSEMVFSRIGR 272
D+ N +I+ Y K GD+ +E +F R+
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKS 396
Query: 273 --------------------SR----------RNVVTWCSMLAALVQNHE-EERACLVFL 301
SR ++ VTW M++ LVQN E A L+
Sbjct: 397 LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSD 456
Query: 302 QARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVK--ACVDENIFVGSALVDLYGKC 359
R +P + S +LS+ L+ G+ +H + K AC D ++ + ++LV +Y KC
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC 516
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
G+IE+A ++F++M Q++ V+WN+MI G +H G D AL LF+EM G P+ VT +
Sbjct: 517 GAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML--DSGKKPNSVTFLG 574
Query: 420 VLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH 479
VLSACS +G + G+ +F++MKE Y I+PG +HY ++DLL R+G + A EFI +P
Sbjct: 575 VLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFT 634
Query: 480 PTISIWGALLGACRMHGKTK----LGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEA 535
P +++GALLG C ++ + K + + AA +L ELDP ++ HV L N+ A GR +
Sbjct: 635 PDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDME 694
Query: 536 TIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEI 578
+RKEM G+KK G SW+ V R +VF + D S + +++
Sbjct: 695 KEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 134/293 (45%), Gaps = 53/293 (18%)
Query: 138 GQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAF 197
G I V S Y+KTG +AR +F+ MP+RN+ T NA ++ V+ R +A F
Sbjct: 72 GSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF 131
Query: 198 KEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKC 257
+E N +++ L A D G ED A L D
Sbjct: 132 REM-----PKNVVSWTVMLTALCD----------------DGRSED---AVELFD----- 162
Query: 258 GDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMIS-- 315
EM RNVV+W +++ L++N + E+A VF +A P+ ++S
Sbjct: 163 ------EM-------PERNVVSWNTLVTGLIRNGDMEKAKQVF-----DAMPSRDVVSWN 204
Query: 316 SVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR 375
+++ E G+E + L ++N+ +++V Y + G + A ++F EMP+R
Sbjct: 205 AMIKGYIENDGMEEAK----LLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER 260
Query: 376 NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
NIV+W AMI G+A AL LF EM ++P+ TL+S+ AC G
Sbjct: 261 NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG 313
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 13/231 (5%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
+I+ Y + ++ A + H + VTWT +I+G V N F A +M R ++P
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPL 465
Query: 108 DFTFPCVFKASSSLQMPITGKQAHALALKGGQIYD--VFVGCSAFDMYSKTGLRVDARNM 165
+ T+ + ++ + GK H + K YD + + S MY+K G DA +
Sbjct: 466 NSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEI 525
Query: 166 FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
F +M Q++ +WN+ I G + A+ FKE L +PNS+TF L+AC+
Sbjct: 526 FAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS----- 580
Query: 226 HLGRQLHAFIIRSGYREDVSVANG------LIDFYGKCGDIVSSEMVFSRI 270
H G + +E S+ G +ID G+ G + +E S +
Sbjct: 581 HSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL 631
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 250/464 (53%), Gaps = 11/464 (2%)
Query: 96 FVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSK 155
F+ + R + TF V A S L P TG+Q HAL +K G + DMYSK
Sbjct: 72 FLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSK 131
Query: 156 TGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAF 215
G VD+ +F+ + +++L +WNA +S +++G+ +A+G F E + T +
Sbjct: 132 YGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSV 191
Query: 216 LNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR 275
+ CA L G+Q+HA ++ +G R+ V + +I FY G I + V++ +
Sbjct: 192 VKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLN-VHT 249
Query: 276 NVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHA 335
+ V S+++ ++N + A L+ + R P ++SS L+ C++ L +G+ +H
Sbjct: 250 DEVMLNSLISGCIRNRNYKEAFLLMSRQR----PNVRVLSSSLAGCSDNSDLWIGKQIHC 305
Query: 336 LAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDM 395
+A++ + + + L+D+YGKCG I A +F +P +++V+W +MI YA GD
Sbjct: 306 VALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVK 365
Query: 396 ALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYAC 455
AL +F EM G+ P+ VT + V+SAC+ AG V+ G F MKE YR+ PG EHY C
Sbjct: 366 ALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVC 425
Query: 456 VVDLLARSGLVDRAYEFIQNMPIHPTIS----IWGALLGACRMHGKTKLGKVAAEKLF-E 510
+D+L+++G + + ++ M + S IW A+L AC ++ G+ A +L E
Sbjct: 426 FIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEE 485
Query: 511 LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
PE++ +V++SN A+ G+W+ +R ++K+ G+ K G+S
Sbjct: 486 TGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 157/315 (49%), Gaps = 15/315 (4%)
Query: 22 PLLGRAVHAQIIRS-HETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLI 80
P GR VHA +I+ ET S LI+MYSK L + V + +V+W +L+
Sbjct: 100 PETGRQVHALMIKQGAETGTISK--TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALL 157
Query: 81 AGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQI 140
+G + NG+ AL F M R+ V+ ++FT V K +SL++ GKQ HA+ + G+
Sbjct: 158 SGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRD 217
Query: 141 YDVFVGCSAFDMYSKTGLRVDARNMFDEMP-QRNLATWNAYISNAVQDGRSLDAVGAFKE 199
V +G + YS GL +A +++ + + N+ IS +++ +A
Sbjct: 218 L-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF----- 271
Query: 200 FLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGD 259
L PN + L C+D L +G+Q+H +R+G+ D + NGL+D YGKCG
Sbjct: 272 LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQ 331
Query: 260 IVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE---PTDFMISS 316
IV + +F I ++VV+W SM+ A N + +A +F + +E P
Sbjct: 332 IVQARTIFRAI--PSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLV 389
Query: 317 VLSACAELGGLELGR 331
V+SACA G ++ G+
Sbjct: 390 VISACAHAGLVKEGK 404
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 44/333 (13%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
LSS++++ S + G+ VHA ++ + + L +I+ YS + L+N A V +
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDLV--VLGTAMISFYSSVGLINEAMKVYNSL 245
Query: 69 HLRT-VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITG 127
++ T V SLI+GC+ N + A L R PN S G
Sbjct: 246 NVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIG 300
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
KQ H +AL+ G + D + DMY K G V AR +F +P +++ +W + I +
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVN 360
Query: 188 GRSLDAVGAFKEFLCVHGE---PNSITFCAFLNACADRLGLHLGRQLHAFIIRSG----- 239
G + A+ F+E +C G PNS+TF ++ACA HA +++ G
Sbjct: 361 GDGVKALEIFRE-MCEEGSGVLPNSVTFLVVISACA-----------HAGLVKEGKECFG 408
Query: 240 -YREDVSVANG------LIDFYGKCGDIVSSEMVFSRIGRSRRN------VVTWCSMLAA 286
+E + G ID K G+ +E ++ + R N W ++L+A
Sbjct: 409 MMKEKYRLVPGTEHYVCFIDILSKAGE---TEEIWRLVERMMENDNQSIPCAIWVAVLSA 465
Query: 287 LVQNHEEERACLVFLQARKEAEPTDFMISSVLS 319
N + R V + +E P + I ++S
Sbjct: 466 CSLNMDLTRGEYVARRLMEETGPENASIYVLVS 498
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 218/430 (50%), Gaps = 46/430 (10%)
Query: 160 VDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNAC 219
V AR FD P+R++ WN IS ++ G L+A F + C
Sbjct: 76 VSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPC----------------- 118
Query: 220 ADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVT 279
DV N +++ Y GD+ + E VF + RNV +
Sbjct: 119 ----------------------RDVMSWNTVLEGYANIGDMEACERVFDDM--PERNVFS 154
Query: 280 WCSMLAALVQNHEEERACLVFLQARKEAE--PTDFMISSVLSACAELGGLELGRSVHALA 337
W ++ QN F + E P D ++ VLSACA+LG + G+ VH
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 338 VKACVDE-NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMA 396
++ ++ V +AL+D+YGKCG+IE A +VF + +R++++WN MI G A G A
Sbjct: 215 ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEA 274
Query: 397 LGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV 456
L LF EM + GI+P VT V VL AC G VE G+ F SM + I P EH CV
Sbjct: 275 LNLFHEMK--NSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCV 332
Query: 457 VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDS 516
VDLL+R+G + +A EFI MP+ IW LLGA +++ K +G+VA E+L +L+P +
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNP 392
Query: 517 GNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNS 576
N V+LSN+ AGR+++A ++ M+D G KK G SWI + + F + H +
Sbjct: 393 ANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTE 452
Query: 577 EIQAMLAKLR 586
E+Q +L +L+
Sbjct: 453 ELQRILRELK 462
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 164/364 (45%), Gaps = 21/364 (5%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHF-VNMRRDCVQP 106
L M + ++ SA V + VV WTS+I G + N V+A +F ++ RD V
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 107 NDFTFPCVFKASSSLQMPITGKQAHALAL-KGGQIYDVFVGCSAFDMYSKTGLRVDARNM 165
N S ++M G A +L DV + + Y+ G +
Sbjct: 94 NTMI-------SGYIEM---GNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERV 143
Query: 166 FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE--PNSITFCAFLNACADRL 223
FD+MP+RN+ +WN I Q+GR + +G+FK + G PN T L+ACA
Sbjct: 144 FDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKR-MVDEGSVVPNDATMTLVLSACAKLG 202
Query: 224 GLHLGRQLHAFIIRSGYRE-DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
G+ +H + GY + DV+V N LID YGKCG I + VF G RR++++W +
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK--GIKRRDLISWNT 260
Query: 283 MLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRS-VHALAVKA 340
M+ L + A +F + + P VL AC +G +E G + +++
Sbjct: 261 MINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 320
Query: 341 CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMALGL 399
+ I +VDL + G + A + ++MP + + V W ++G VD+
Sbjct: 321 SIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVA 380
Query: 400 FEEM 403
EE+
Sbjct: 381 LEEL 384
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD-CV 104
N ++ Y+ + + + + V R V +W LI G NGR L F M + V
Sbjct: 125 NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSV 184
Query: 105 QPNDFTFPCVFKASSSLQMPITGKQAHALALK-GGQIYDVFVGCSAFDMYSKTGLRVDAR 163
PND T V A + L GK H G DV V + DMY K G A
Sbjct: 185 VPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAM 244
Query: 164 NMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNAC 219
+F + +R+L +WN I+ G +A+ F E P+ +TF L AC
Sbjct: 245 EVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCAC 300
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 167/581 (28%), Positives = 283/581 (48%), Gaps = 47/581 (8%)
Query: 10 SSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTH 69
+SLL + V + G+ +HA I S S L L+ YS +LL+ AQ + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISS-GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSE 145
Query: 70 LRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQ 129
+ + W LI + N RF ++ + M ++ ++FT+P V KA ++L G+
Sbjct: 146 ILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVD-ARNMFDEMPQRNLATWNAYISNAVQD- 187
H +++V + MY + G +VD AR +FD M +R+ +WNA I+ +
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFG-KVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 188 ----------------------------GRSLDAVGAFKEFLCVHGEPN------SITFC 213
G L+A CV G N S+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 214 AFLNACADRLGLHLGRQLHAFIIRS-GYREDV-SVANGLIDFYGKCGDIVSSEMVFSRIG 271
L AC+ L G+ H +IRS + D+ +V N LI Y +C D+ + +VF ++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV- 383
Query: 272 RSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELG 330
++ TW S+++ N E + + P ++S+L A +G L+ G
Sbjct: 384 -EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG 442
Query: 331 RSVHALAVK-ACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAH 389
+ H ++ + + + ++LVD+Y K G I A++VF M +R+ VT+ ++I GY
Sbjct: 443 KEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGR 502
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
G ++AL F++M GI P +VT+V+VLSACS + V G +F M+ ++ I
Sbjct: 503 LGKGEVALAWFKDM--DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLR 560
Query: 450 AEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEK-L 508
EHY+C+VDL R+G +D+A + +P P+ ++ LL AC +HG T +G+ AA+K L
Sbjct: 561 LEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLL 620
Query: 509 FELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKK 549
E PE G++++L++M A G W + V+ + D+G++K
Sbjct: 621 LETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 218/516 (42%), Gaps = 74/516 (14%)
Query: 57 LLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFK 116
L NS +H +S L SL+ + FV L ++ CV N+F
Sbjct: 49 LFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFV--LYSSASLLSTCVGFNEF------- 99
Query: 117 ASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLAT 176
+ G+Q HA + G +D + YS L +A+ + + +
Sbjct: 100 --------VPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP 151
Query: 177 WNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFII 236
WN I + +++ R ++V +K + + T+ + + ACA L GR +H I
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSML------------ 284
S +R ++ V N LI Y + G + + +F R+ S R+ V+W +++
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM--SERDAVSWNAIINCYTSEEKLGEA 269
Query: 285 -------------AALVQNHEEERACLV------FLQARKEAEPTDFMISSV-----LSA 320
A++V + CL L + I SV L A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 321 CAELGGLELGRSVHALAVKAC-----VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR 375
C+ +G L+ G+ H L +++C +D V ++L+ +Y +C + +A VF ++
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 376 NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG-- 433
++ TWN++I G+A+ + L +EM L G P+++TL S+L +R G ++ G
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLS--GFHPNHITLASILPLFARVGNLQHGKE 444
Query: 434 MHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACR 493
H + ++ Y+ + +VD+ A+SG + A +M ++ + G
Sbjct: 445 FHCYILRRQSYK--DCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG--- 499
Query: 494 MHGKTKLGKVAAEKLFELDPED-SGNHVVLSNMLAS 528
+G+ G+VA ++D +HV + +L++
Sbjct: 500 -YGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 3 FHPPNL-LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA 61
FHP ++ L+S+L + G+ H I+R L N L++MY+K + +A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSL 121
+ V R VT+TSLI G G+ AL F +M R ++P+ T V A S
Sbjct: 479 KRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 122 QMPITGKQAHALALKGGQIYDVFVGCSAF----DMYSKTGLRVDARNMFDEMP 170
+ ++ H L K ++ + + + D+Y + G AR++F +P
Sbjct: 539 NLV---REGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 167/581 (28%), Positives = 283/581 (48%), Gaps = 47/581 (8%)
Query: 10 SSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTH 69
+SLL + V + G+ +HA I S S L L+ YS +LL+ AQ + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISS-GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSE 145
Query: 70 LRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQ 129
+ + W LI + N RF ++ + M ++ ++FT+P V KA ++L G+
Sbjct: 146 ILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVD-ARNMFDEMPQRNLATWNAYISNAVQD- 187
H +++V + MY + G +VD AR +FD M +R+ +WNA I+ +
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFG-KVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 188 ----------------------------GRSLDAVGAFKEFLCVHGEPN------SITFC 213
G L+A CV G N S+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 214 AFLNACADRLGLHLGRQLHAFIIRS-GYREDV-SVANGLIDFYGKCGDIVSSEMVFSRIG 271
L AC+ L G+ H +IRS + D+ +V N LI Y +C D+ + +VF ++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV- 383
Query: 272 RSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELG 330
++ TW S+++ N E + + P ++S+L A +G L+ G
Sbjct: 384 -EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG 442
Query: 331 RSVHALAVK-ACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAH 389
+ H ++ + + + ++LVD+Y K G I A++VF M +R+ VT+ ++I GY
Sbjct: 443 KEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGR 502
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
G ++AL F++M GI P +VT+V+VLSACS + V G +F M+ ++ I
Sbjct: 503 LGKGEVALAWFKDM--DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLR 560
Query: 450 AEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEK-L 508
EHY+C+VDL R+G +D+A + +P P+ ++ LL AC +HG T +G+ AA+K L
Sbjct: 561 LEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLL 620
Query: 509 FELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKK 549
E PE G++++L++M A G W + V+ + D+G++K
Sbjct: 621 LETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 218/516 (42%), Gaps = 74/516 (14%)
Query: 57 LLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFK 116
L NS +H +S L SL+ + FV L ++ CV N+F
Sbjct: 49 LFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFV--LYSSASLLSTCVGFNEF------- 99
Query: 117 ASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLAT 176
+ G+Q HA + G +D + YS L +A+ + + +
Sbjct: 100 --------VPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP 151
Query: 177 WNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFII 236
WN I + +++ R ++V +K + + T+ + + ACA L GR +H I
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSML------------ 284
S +R ++ V N LI Y + G + + +F R+ S R+ V+W +++
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM--SERDAVSWNAIINCYTSEEKLGEA 269
Query: 285 -------------AALVQNHEEERACLV------FLQARKEAEPTDFMISSV-----LSA 320
A++V + CL L + I SV L A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 321 CAELGGLELGRSVHALAVKAC-----VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR 375
C+ +G L+ G+ H L +++C +D V ++L+ +Y +C + +A VF ++
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 376 NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG-- 433
++ TWN++I G+A+ + L +EM L G P+++TL S+L +R G ++ G
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLS--GFHPNHITLASILPLFARVGNLQHGKE 444
Query: 434 MHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACR 493
H + ++ Y+ + +VD+ A+SG + A +M ++ + G
Sbjct: 445 FHCYILRRQSYK--DCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG--- 499
Query: 494 MHGKTKLGKVAAEKLFELDPED-SGNHVVLSNMLAS 528
+G+ G+VA ++D +HV + +L++
Sbjct: 500 -YGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 3 FHPPNL-LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA 61
FHP ++ L+S+L + G+ H I+R L N L++MY+K + +A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSL 121
+ V R VT+TSLI G G+ AL F +M R ++P+ T V A S
Sbjct: 479 KRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 122 QMPITGKQAHALALKGGQIYDVFVGCSAF----DMYSKTGLRVDARNMFDEMP 170
+ ++ H L K ++ + + + D+Y + G AR++F +P
Sbjct: 539 NLV---REGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 218/408 (53%), Gaps = 9/408 (2%)
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
AR + +TWN ++++ + E +PN +TF L ACA
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACAS 125
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWC 281
LGL GRQ+ +++ G+ DV V N LI YG C + VF + + RNVV+W
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM--TERNVVSWN 183
Query: 282 SMLAALVQNHEEERACLVFLQA-RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKA 340
S++ ALV+N + F + K P + + +LSAC G L LG+ VH+ +
Sbjct: 184 SIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVR 241
Query: 341 CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLF 400
++ N +G+ALVD+Y K G +E A VF M +N+ TW+AMI G A G + AL LF
Sbjct: 242 ELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLF 301
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
+M + + P+YVT + VL ACS G V+ G F M++I++I+P HY +VD+L
Sbjct: 302 SKM-MKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDIL 360
Query: 461 ARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMH---GKTKLGKVAAEKLFELDPEDSG 517
R+G ++ AY+FI+ MP P +W LL AC +H +G+ ++L EL+P+ SG
Sbjct: 361 GRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSG 420
Query: 518 NHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVF 565
N V+++N A A W EA VR+ MK+ +KK G S + + H F
Sbjct: 421 NLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRF 468
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 179/381 (46%), Gaps = 18/381 (4%)
Query: 28 VHAQIIRSHETPLP--SFLCNHLINMYSKLDL---LNSAQHVLSLTHLRTVVTWTSLIAG 82
+H QI H + L SF+ + L+ + S L L L A+ +L + T TW L G
Sbjct: 32 IHGQI---HLSSLQNDSFIISELVRV-SSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRG 87
Query: 83 CVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYD 142
++ V ++ + M+R ++PN TFP + KA +S G+Q LK G +D
Sbjct: 88 YSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFD 147
Query: 143 VFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLC 202
V+VG + +Y DAR +FDEM +RN+ +WN+ ++ V++G+ F E +
Sbjct: 148 VYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIG 207
Query: 203 VHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVS 262
P+ T L+AC L LG+ +H+ ++ + + L+D Y K G +
Sbjct: 208 KRFCPDETTMVVLLSACGGNLS--LGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEY 265
Query: 263 SEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA--EPTDFMISSVLSA 320
+ +VF R+ +NV TW +M+ L Q E A +F + KE+ P VL A
Sbjct: 266 ARLVFERM--VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCA 323
Query: 321 CAELGGLELG-RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIV 378
C+ G ++ G + H + + + A+VD+ G+ G + A +MP + + V
Sbjct: 324 CSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAV 383
Query: 379 TWNAMIGGYA-HQGDVDMALG 398
W ++ + H + D +G
Sbjct: 384 VWRTLLSACSIHHDEDDEGIG 404
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 245/473 (51%), Gaps = 43/473 (9%)
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISN 183
P GK+ HA +K G D+ + ++ K G AR +FDE+P+ L+ +N IS
Sbjct: 50 PKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISG 109
Query: 184 AVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADR-----LGLHLGRQLHAFIIRS 238
++ G + + + + + T L A R L L R +HA II+
Sbjct: 110 YLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKC 169
Query: 239 GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAA-----LVQNHEE 293
D + L+D Y K G + S+ VF + NVV SM++ V++ EE
Sbjct: 170 DVELDDVLITALVDTYVKSGKLESARTVFETM--KDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 294 ---------------------------ERACLVFLQARKEA-EPTDFMISSVLSACAELG 325
+R+ +++ ++ P +SV+ AC+ L
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 326 GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIG 385
E+G+ VHA +K+ V +I +GS+L+D+Y KCG I +A +VF +M ++N+ +W +MI
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 386 GYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYR 445
GY G+ + AL LF M I P+YVT + LSACS +G V+ G IFESM+ Y
Sbjct: 348 GYGKNGNPEEALELFTRMK--EFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYS 405
Query: 446 IEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAA 505
++P EHYAC+VDL+ R+G +++A+EF + MP P IW ALL +C +HG +L +AA
Sbjct: 406 MKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAA 465
Query: 506 EKLFELDPED-SGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIA 557
+LF+L+ + G ++ LSN+ AS +W+ + +R+ MK I K +G SW +
Sbjct: 466 SELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTS 518
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 187/435 (42%), Gaps = 43/435 (9%)
Query: 2 NFHPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA 61
+ P ++ L+ +++ +P G+ +HA II++ P + LI ++ K L+ A
Sbjct: 30 SLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLI-LHLKCGCLSYA 88
Query: 62 QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKAS--- 118
+ V T+ + +I+G + +G LL M + + +T V KAS
Sbjct: 89 RQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSR 148
Query: 119 -SSLQMPIT-GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLAT 176
S++ +P + + HA +K D + + D Y K+G AR +F+ M N+
Sbjct: 149 GSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVC 208
Query: 177 WNAYISNAVQDGRSLDAVGAFK--------------EFLCVHGE---------------- 206
+ IS + G DA F E GE
Sbjct: 209 CTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAG 268
Query: 207 --PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSE 264
PN TF + + AC+ +G+Q+HA I++SG + + + L+D Y KCG I +
Sbjct: 269 FHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDAR 328
Query: 265 MVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK-EAEPTDFMISSVLSACAE 323
VF ++ +NV +W SM+ +N E A +F + ++ EP LSAC+
Sbjct: 329 RVFDQM--QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSH 386
Query: 324 LGGLELGRSV-HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR-NIVTWN 381
G ++ G + ++ + + + +VDL G+ G + A + MP+R + W
Sbjct: 387 SGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWA 446
Query: 382 AMIGGYAHQGDVDMA 396
A++ G+V++A
Sbjct: 447 ALLSSCNLHGNVELA 461
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 149/457 (32%), Positives = 237/457 (51%), Gaps = 36/457 (7%)
Query: 176 TWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLH--LGRQLHA 233
+W + I+ ++GR +A F + EPN ITF A L+ C D LG LH
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 234 FIIRSGY-REDVSVANGLIDFYGKCGDIVSSEMVFS------------------RIGR-- 272
+ + G R V V +I Y K G + +VF R G+
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 273 ---------SRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLSACA 322
R++++W +M+ V+ +E A L F + + D++ I + L+AC
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACT 217
Query: 323 ELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNA 382
LG L G VH + N+ V ++L+DLY +CG +E A QVF M +R +V+WN+
Sbjct: 218 NLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNS 277
Query: 383 MIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKE 442
+I G+A G+ +L F +M G P VT L+ACS G VE G+ F+ MK
Sbjct: 278 VIVGFAANGNAHESLVYFRKMQ--EKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 443 IYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKT-KLG 501
YRI P EHY C+VDL +R+G ++ A + +Q+MP+ P + G+LL AC HG L
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLA 395
Query: 502 KVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNR 561
+ + L +L+ + N+V+LSNM A+ G+WE A+ +R++MK +G+KK G+S I + +
Sbjct: 396 ERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDC 455
Query: 562 VHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDT 598
+HVF A D++H + + I+ +L + +++ G +T
Sbjct: 456 MHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 183/417 (43%), Gaps = 44/417 (10%)
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQM--PITGKQ 129
T V+WTS I NGR A F +M V+PN TF + G
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 130 AHALALKGGQIYD-VFVGCSAFDMYSKTGLRVDAR------------------------- 163
H A K G + V VG + MYSK G AR
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 164 ------NMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLN 217
MFD+MP+R+L +W A I+ V+ G +A+ F+E +P+ + A LN
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 218 ACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNV 277
AC + L G +H +++ ++ +V V+N LID Y +CG + + VF + +R V
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM--EKRTV 272
Query: 278 VTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELG-RSVHA 335
V+W S++ N + + F + +++ +P + L+AC+ +G +E G R
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 336 LAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR-NIVTWNAMIGGYAHQG-DV 393
+ + I LVDLY + G +E+A ++ MP + N V +++ ++ G ++
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Query: 394 DMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI-YRIEPG 449
+A L + +T + +YV L ++ +A G E + MK + + +PG
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVILSNMYAA---DGKWEGASKMRRKMKGLGLKKQPG 446
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 110/239 (46%), Gaps = 5/239 (2%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
GR A+++ + S N +I+ Y + +++A + R +++WT++I G V
Sbjct: 123 GRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFV 182
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
G ALL F M+ V+P+ A ++L G H L +V
Sbjct: 183 KKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVR 242
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
V S D+Y + G AR +F M +R + +WN+ I +G + +++ F++
Sbjct: 243 VSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG 302
Query: 205 GEPNSITFCAFLNACADRLGLHLGRQLHAF-IIRSGYREDVSVANG--LIDFYGKCGDI 260
+P+++TF L AC+ +GL + L F I++ YR + + L+D Y + G +
Sbjct: 303 FKPDAVTFTGALTACS-HVGL-VEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRL 359
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 266/515 (51%), Gaps = 48/515 (9%)
Query: 77 TSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMP--ITGKQAHALA 134
++LI ++ G + AL+ + +RR V + P + +A + + +P + GK H+ +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACV-VPRVVLGKLLHSES 72
Query: 135 LKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAV 194
+K G DV VG S MY K G V AR +FDEMP+RN+ATWNA I + +G ++ A
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 195 GAFKEF-LCVHGEPNSITFCAFLNACADRLGLHLGRQL-----------HAFIIRSG--- 239
G F+E +C N++T+ + R+ + R+L A+ + G
Sbjct: 133 GLFEEISVC----RNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYV 188
Query: 240 ----------YREDVSVANGLI-----DFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSML 284
+ ED+ N + Y + GD+ + +F R+ R++V W +++
Sbjct: 189 NNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV--FARDLVIWNTLI 246
Query: 285 AALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVD 343
A QN + A F + E EP +SS+LSACA+ G L++GR VH+L ++
Sbjct: 247 AGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIE 306
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM 403
N FV +AL+D+Y KCG +ENA VF + R++ N+MI A G AL +F
Sbjct: 307 LNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFS-- 364
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
T+ S + P +T ++VL+AC G + G+ IF MK ++P +H+ C++ LL RS
Sbjct: 365 TMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCLIHLLGRS 423
Query: 464 GLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAA---EKLFELDPEDSGNHV 520
G + AY ++ M + P ++ GALLGAC++H T++ + E + S NH+
Sbjct: 424 GKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHL 483
Query: 521 V-LSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
+SN+ A RW+ A +R EM+ G++K+ G S
Sbjct: 484 ASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%)
Query: 42 SFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
+F+ + +++ Y ++ ++ A+ + R +V W +LIAG NG A+ F NM+
Sbjct: 208 AFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQG 267
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD 161
+ +P+ T + A + G++ H+L G + FV + DMY+K G +
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
A ++F+ + R++A N+ IS G+ +A+ F + +P+ ITF A L AC
Sbjct: 328 ATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVH 387
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDI 260
L G ++ + + + +V LI G+ G +
Sbjct: 388 GGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKL 426
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 251/505 (49%), Gaps = 47/505 (9%)
Query: 126 TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
T KQ+H + G D + S G A ++F P N Y+ N +
Sbjct: 30 TLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPN-----TYLHNTM 84
Query: 186 QDGRSL--------DAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIR 237
SL A+ +++ + +P++ TF L + GRQ+H ++
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 238 SGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI-----------------------GRSR 274
G+ V V GLI Y CG + + +F + RS
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 275 --------RNVVTWCSMLAALVQNHEEERACLVFLQARKE-AEPTDFMISSVLSACAELG 325
RN V+W +++ ++ A VF + E EP + + +VLSACA+LG
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 326 GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIG 385
LELG + + ++ + + +A++D+Y K G+I A VF + +RN+VTW +I
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 386 GYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYR 445
G A G AL +F M G+ P+ VT +++LSACS G V+ G +F SM+ Y
Sbjct: 325 GLATHGHGAEALAMFNRMV--KAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 446 IEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAA 505
I P EHY C++DLL R+G + A E I++MP +IWG+LL A +H +LG+ A
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Query: 506 EKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVF 565
+L +L+P +SGN+++L+N+ ++ GRW+E+ ++R MK IG+KK G S I V+NRV+ F
Sbjct: 443 SELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKF 502
Query: 566 QAKDSSHEKNSEIQAMLAKLREEMK 590
+ D +H + I +L ++ +++
Sbjct: 503 ISGDLTHPQVERIHEILQEMDLQIQ 527
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 182/416 (43%), Gaps = 50/416 (12%)
Query: 103 CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDA 162
C +P+ FTFP V K + + G+Q H + G V V MY G DA
Sbjct: 111 CAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDA 170
Query: 163 RNMFDEMPQRNLATWNAY---------------------------------ISNAVQDGR 189
R MFDEM +++ WNA IS + GR
Sbjct: 171 RKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGR 230
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
+ +A+ F+ L + EP+ +T A L+ACAD L LG ++ +++ G VS+ N
Sbjct: 231 ASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNA 290
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL-VQNHEEERACLVFLQARKEAE 308
+ID Y K G+I + VF + + RNVVTW +++A L H E + +
Sbjct: 291 VIDMYAKSGNITKALDVFECV--NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVR 348
Query: 309 PTDFMISSVLSACAELGGLELG-RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQ 367
P D ++LSAC+ +G ++LG R +++ K + NI ++DL G+ G + A++
Sbjct: 349 PNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADE 408
Query: 368 VFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
V MP + N W +++ D+++ E+ + +Y+ L ++ S R
Sbjct: 409 VIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGR 468
Query: 427 AGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTI 482
ES M +M + ++ A + V+ +R Y+FI HP +
Sbjct: 469 WD--ESRM--MRNMMKGIGVKKMAGESSIEVE--------NRVYKFISGDLTHPQV 512
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 122/252 (48%), Gaps = 4/252 (1%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTH--LRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC 103
N L+ Y K+ ++ A+ +L + +R V+WT +I+G +GR A+ F M +
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDAR 163
V+P++ T V A + L G++ + G V + + DMY+K+G A
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKAL 305
Query: 164 NMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRL 223
++F+ + +RN+ TW I+ G +A+ F + PN +TF A L+AC+
Sbjct: 306 DVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG 365
Query: 224 GLHLGRQL-HAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
+ LG++L ++ + G ++ +ID G+ G + ++ V + + N W S
Sbjct: 366 WVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM-PFKANAAIWGS 424
Query: 283 MLAALVQNHEEE 294
+LAA +H+ E
Sbjct: 425 LLAASNVHHDLE 436
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 46/330 (13%)
Query: 208 NSITFCAFLNACADRLGLHLG-----RQLHAFIIRSGY-REDVSVANGLIDFYGKCGDIV 261
N+++ + LN L +H +Q H ++I +G R++++VA I+ G +
Sbjct: 6 NALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAK-FIEACSNAGHLR 64
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE----AEPTDFMISSV 317
+ VF+ + N +M+ AL E + RK A+P F V
Sbjct: 65 YAYSVFTH--QPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFV 122
Query: 318 LSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI 377
L + + GR +H V D ++ V + L+ +Y CG + +A ++F EM +++
Sbjct: 123 LKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDV 182
Query: 378 VTWNAMIGGYAHQGDVDMALGLFEEM-------TLGSCGIA------------------- 411
WNA++ GY G++D A L E M +C I+
Sbjct: 183 NVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRML 242
Query: 412 -----PSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLV 466
P VTL++VLSAC+ G++E G I S + + V+D+ A+SG +
Sbjct: 243 MENVEPDEVTLLAVLSACADLGSLELGERIC-SYVDHRGMNRAVSLNNAVIDMYAKSGNI 301
Query: 467 DRAYEFIQNMPIHPTISIWGALLGACRMHG 496
+A + + + ++ W ++ HG
Sbjct: 302 TKALDVFECVNERNVVT-WTTIIAGLATHG 330
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 44 LCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC 103
L N +I+MY+K + A V + R VVTWT++IAG +G AL F M +
Sbjct: 287 LNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQA-HALALKGGQIYDV-FVGCSAFDMYSKTGLRVD 161
V+PND TF + A S + GK+ +++ K G ++ GC D+ + G +
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC-MIDLLGRAGKLRE 405
Query: 162 ARNMFDEMP-QRNLATWNAYIS 182
A + MP + N A W + ++
Sbjct: 406 ADEVIKSMPFKANAAIWGSLLA 427
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 241/468 (51%), Gaps = 6/468 (1%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
L++MYSK L A+ + R VV+W+++IA G+ A+ F +M R ++PN
Sbjct: 341 LMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPN 400
Query: 108 DFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFD 167
T V + + + GK H A+K ++ + MY+K G A F+
Sbjct: 401 AVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFE 460
Query: 168 EMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE-PNSITFCAFLNACADRLGLH 226
+P ++ +NA Q G + A +K + +HG P+S T L CA
Sbjct: 461 RLPIKDAVAFNALAQGYTQIGDANKAFDVYKN-MKLHGVCPDSRTMVGMLQTCAFCSDYA 519
Query: 227 LGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAA 286
G ++ II+ G+ + VA+ LI+ + KC + ++ ++F + G ++ V+W M+
Sbjct: 520 RGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCG-FEKSTVSWNIMMNG 578
Query: 287 LVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDEN 345
+ + + E A F Q + E +P +++ A AEL L +G SVH+ ++
Sbjct: 579 YLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQ 638
Query: 346 IFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
VG++LVD+Y KCG IE++E+ F E+ + IV+WN M+ YA G A+ LF M
Sbjct: 639 TPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQE 698
Query: 406 GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGL 465
+ P V+ +SVLSAC AG VE G IFE M E ++IE EHYAC+VDLL ++GL
Sbjct: 699 NE--LKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGL 756
Query: 466 VDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDP 513
A E ++ M + ++ +WGALL + RMH L A +L +L+P
Sbjct: 757 FGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEP 804
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 215/459 (46%), Gaps = 10/459 (2%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD 102
++ L+ MY K L SA+ V H++ VVTW ++++G NG AALL F +MR
Sbjct: 136 YIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSC 195
Query: 103 CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDA 162
CV + + + A S L+ + H L +K G I+ G DMY A
Sbjct: 196 CVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYAA 253
Query: 163 RNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADR 222
++F+E+ +++ ++W ++ +G + + F N + + L A A
Sbjct: 254 ESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYV 313
Query: 223 LGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCS 282
L G +H + ++ G DVSVA L+ Y KCG++ +E +F I R+VV+W +
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINI--EDRDVVSWSA 371
Query: 283 MLAALVQNHEEERACLVFLQ-ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
M+A+ Q + + A +F R +P ++SVL CA + LG+S+H A+KA
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD 431
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
++ + +A++ +Y KCG A + F +P ++ V +NA+ GY GD + A +++
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYK 491
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIF-ESMKEIYRIEPGAEHYACVVDLL 460
M L G+ P T+V +L C+ G ++ + +K + E H ++++
Sbjct: 492 NMKLH--GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMF 547
Query: 461 ARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
+ + A + W ++ +HG+ +
Sbjct: 548 TKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 139/488 (28%), Positives = 229/488 (46%), Gaps = 26/488 (5%)
Query: 28 VHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNG 87
VH +I S P N LIN YS + ++ + VV W S+I G G
Sbjct: 24 VHGSLIVSGLKPH-----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 88 RFVAALLHFVNMRRD-CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVG 146
AL F M + + P+ ++F KA + G + H L + G DV++G
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 147 CSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE 206
+ +MY K V AR +FD+M +++ TWN +S Q+G S A+ F + +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
+ ++ + A + + R LH +I+ G+ + ++GLID Y C D+ ++E V
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESV 256
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTDFMISSVLSACAELG 325
F + R++ +W +M+AA N E +F L + +S L A A +G
Sbjct: 257 FEEVW--RKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVG 314
Query: 326 GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIG 385
L G ++H AV+ + ++ V ++L+ +Y KCG +E AEQ+F + R++V+W+AMI
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 386 GYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG--MHIFESMKEI 443
Y G D A+ LF +M I P+ VTL SVL C+ A G +H + +
Sbjct: 375 SYEQAGQHDEAISLFRDMM--RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD- 431
Query: 444 YRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKV 503
IE E V+ + A+ G A + + +PI ++ + AL G T++G
Sbjct: 432 --IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA-FNAL-----AQGYTQIGD- 482
Query: 504 AAEKLFEL 511
A K F++
Sbjct: 483 -ANKAFDV 489
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 229/509 (44%), Gaps = 27/509 (5%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
LI+MY L +A+ V + +W +++A +NG F L F MR V+ N
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMN 299
Query: 108 DFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFD 167
+A++ + + G H A++ G I DV V S MYSK G A +F
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 168 EMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHL 227
+ R++ +W+A I++ Q G+ +A+ F++ + +H +PN++T + L CA L
Sbjct: 360 NIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRL 419
Query: 228 GRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL 287
G+ +H + I++ ++ A +I Y KCG + F R+ ++ V + ++
Sbjct: 420 GKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERL--PIKDAVAFNALAQGY 477
Query: 288 VQNHEEERACLVFLQARKEAE-PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENI 346
Q + +A V+ + P + +L CA G V+ +K D
Sbjct: 478 TQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSEC 537
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
V AL++++ KC ++ A +F + +++ V+WN M+ GY G + A+ F +M +
Sbjct: 538 HVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKV 597
Query: 406 GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV----VDLLA 461
P+ VT V+++ A + A+ GM + S+ I+ G V VD+ A
Sbjct: 598 EK--FQPNAVTFVNIVRAAAELSALRVGMSVHSSL-----IQCGFCSQTPVGNSLVDMYA 650
Query: 462 RSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLF------ELDPED 515
+ G+++ + + + +S W +L A HG A LF EL P D
Sbjct: 651 KCGMIESSEKCFIEISNKYIVS-WNTMLSAYAAHGLAS----CAVSLFLSMQENELKP-D 704
Query: 516 SGNHVVLSNMLASAGRWEEATIVRKEMKD 544
S + + + + AG EE + +EM +
Sbjct: 705 SVSFLSVLSACRHAGLVEEGKRIFEEMGE 733
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 182/392 (46%), Gaps = 12/392 (3%)
Query: 1 MNFH-PPN--LLSSLLESAVSTRSPLLGRAVHAQIIRSH-ETPLPSFLCNHLINMYSKLD 56
M H PN L+S+L+ + LG+++H I++ E+ L + +I+MY+K
Sbjct: 393 MRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET--ATAVISMYAKCG 450
Query: 57 LLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFK 116
+ A ++ V + +L G G A + NM+ V P+ T + +
Sbjct: 451 RFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQ 510
Query: 117 ASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP-QRNLA 175
+ G + +K G + V + +M++K A +FD+ +++
Sbjct: 511 TCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTV 570
Query: 176 TWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFI 235
+WN ++ + G++ +AV F++ +PN++TF + A A+ L +G +H+ +
Sbjct: 571 SWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL 630
Query: 236 IRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEER 295
I+ G+ V N L+D Y KCG I SSE F I S + +V+W +ML+A +
Sbjct: 631 IQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEI--SNKYIVSWNTMLSAYAAHGLASC 688
Query: 296 ACLVFLQARK-EAEPTDFMISSVLSACAELGGLELGRSV-HALAVKACVDENIFVGSALV 353
A +FL ++ E +P SVLSAC G +E G+ + + + ++ + + +V
Sbjct: 689 AVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMV 748
Query: 354 DLYGKCGSIENAEQVFSEMPQRNIV-TWNAMI 384
DL GK G A ++ M + V W A++
Sbjct: 749 DLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 186/409 (45%), Gaps = 55/409 (13%)
Query: 148 SAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG-E 206
+A+ ++ + L +R +FD + + WN+ I + G +A+G F G +
Sbjct: 41 NAYSLFQRQDL---SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGID 97
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
P+ +F L ACA + G ++H I G DV + L++ Y K D+VS+ V
Sbjct: 98 PDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQV 157
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLSACAELG 325
F ++ ++VVTW +M++ L QN A L+F R D + + +++ A ++L
Sbjct: 158 FDKM--HVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE 215
Query: 326 GLELGRSVHALAVKACVDENIFV-GSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMI 384
++ R +H L +K IF S L+D+Y C + AE VF E+ +++ +W M+
Sbjct: 216 KSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMM 272
Query: 385 GGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIY 444
YAH G + L LF+ M + + + V S L A + G + G+ I
Sbjct: 273 AAYAHNGFFEEVLELFDLMR--NYDVRMNKVAAASALQAAAYVGDLVKGIAIH------- 323
Query: 445 RIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVA 504
D + GL+ +S+ +L+ G+ ++
Sbjct: 324 -------------DYAVQQGLIG-------------DVSVATSLMSMYSKCGELEI---- 353
Query: 505 AEKLFELDPEDSGNHVVLSNMLAS---AGRWEEATIVRKEMKDIGIKKN 550
AE+LF ++ ED + V S M+AS AG+ +EA + ++M I IK N
Sbjct: 354 AEQLF-INIEDR-DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPN 400
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 230 QLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQ 289
Q+H +I SG + N LI+ Y S ++F + VV W SM+ +
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSV--RDPGVVLWNSMIRGYTR 76
Query: 290 N--HEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIF 347
H E ++ K +P + + L ACA + G +H L + ++ +++
Sbjct: 77 AGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVY 136
Query: 348 VGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGS 407
+G+ALV++Y K + +A QVF +M +++VTWN M+ G A G AL LF +M S
Sbjct: 137 IGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR--S 194
Query: 408 CGIAPSYVTLVSVLSACSR 426
C + +V+L +++ A S+
Sbjct: 195 CCVDIDHVSLYNLIPAVSK 213
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 270/537 (50%), Gaps = 42/537 (7%)
Query: 42 SFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
SF N +I+ Y+K + A + R V+W+++I G NG +A++ F M
Sbjct: 136 SFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM-- 193
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHAL----ALKGGQIYDVFVGCSAFDMYSKTG 157
P + P + ++ + A L +L G+ V+ + Y + G
Sbjct: 194 ----PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRG 249
Query: 158 LRVDARNMFDEMPQ---------------RNLATWNAYISNAVQDGRSLDAVGAFKEFLC 202
AR +FD++P +N+ +WN+ I ++ G + A F +
Sbjct: 250 QVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM-- 307
Query: 203 VHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY-REDVSVANGLIDFYGKCGDIV 261
+ ++I++ ++ +H+ R AF + S D N ++ Y G++
Sbjct: 308 --KDRDTISWNTMIDGY-----VHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVE 360
Query: 262 SSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE-PTDFMISSVLSA 320
+ F + ++ V+W S++AA +N + + A +F++ E E P ++S+LSA
Sbjct: 361 LARHYFEKT--PEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
Query: 321 CAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVT 379
L L LG +H + VK + + + V +AL+ +Y +CG I + ++F EM +R ++T
Sbjct: 419 STGLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVIT 477
Query: 380 WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFES 439
WNAMIGGYA G+ AL LF M S GI PS++T VSVL+AC+ AG V+ F S
Sbjct: 478 WNAMIGGYAFHGNASEALNLFGSMK--SNGIYPSHITFVSVLNACAHAGLVDEAKAQFVS 535
Query: 440 MKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTK 499
M +Y+IEP EHY+ +V++ + G + A I +MP P ++WGALL ACR++
Sbjct: 536 MMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVG 595
Query: 500 LGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWI 556
L VAAE + L+PE S +V+L NM A G W+EA+ VR M+ IKK G SW+
Sbjct: 596 LAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 170/403 (42%), Gaps = 60/403 (14%)
Query: 155 KTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCA 214
++G +AR++F+++ RN TWN IS V+ R ++ ++ V + + +T+
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKR-REMNQA---RKLFDVMPKRDVVTWNT 107
Query: 215 FLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR 274
++ G+ + R+ S N +I Y K I + ++F ++
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMPSRDSFS-WNTMISGYAKNRRIGEALLLFEKM--PE 164
Query: 275 RNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLS---------ACAEL 324
RN V+W +M+ QN E + A ++F + K++ P +++ ++ +
Sbjct: 165 RNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQY 224
Query: 325 GGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ---------- 374
G L GR ++ ++ + L+ YG+ G +E A +F ++P
Sbjct: 225 GSLVSGR-----------EDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 375 -----RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGA 429
+N+V+WN+MI Y GDV A LF++M S+ T++ SR
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRD---TISWNTMIDGYVHVSR--- 327
Query: 430 VESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALL 489
+E +F M A + +V A G V+ A + + P T+S W +++
Sbjct: 328 MEDAFALFSEMP-----NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-WNSII 381
Query: 490 GACRMHGKTKLGKVAAEKLFEL--DPEDSGNHVVLSNMLASAG 530
A + K K K A + + + E H + S + AS G
Sbjct: 382 AA---YEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTG 421
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/574 (28%), Positives = 280/574 (48%), Gaps = 20/574 (3%)
Query: 8 LLSSLLESAVSTRSP-LLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS 66
+L S++++ + P LLG +H +++ + + N LI+MY+K + + V
Sbjct: 48 ILPSVIKACAFQQEPFLLGAQLHCLCLKAG-ADCDTVVSNSLISMYAKFSRKYAVRKVFD 106
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAAL-----LHFVNMRRDCVQPNDFTFPCVFKASSSL 121
R V++ S+I C +G A+ ++F C SSS
Sbjct: 107 EMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSS- 165
Query: 122 QMPITGKQAHALALKGGQIYD-VFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAY 180
+ HAL L ++ + V + + DMY K A ++FD+M +N +W A
Sbjct: 166 ---KVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAM 222
Query: 181 ISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD-RLGLHLGRQLHAFIIRSG 239
IS V + V F+ + PN +T + L AC + G L +++H F R G
Sbjct: 223 ISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHG 282
Query: 240 YREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLV 299
D + + Y +CG++ S ++F R+VV W SM++ + + +
Sbjct: 283 CHADERLTAAFMTMYCRCGNVSLSRVLFET--SKVRDVVMWSSMISGYAETGDCSEVMNL 340
Query: 300 FLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGK 358
Q RKE E + +++SAC L +VH+ +K +I +G+AL+D+Y K
Sbjct: 341 LNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAK 400
Query: 359 CGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLV 418
CGS+ A +VF E+ ++++V+W++MI Y G AL +F+ M G G + +
Sbjct: 401 CGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKG--GHEVDDMAFL 458
Query: 419 SVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPI 478
++LSAC+ AG VE IF + Y + EHYAC ++LL R G +D A+E NMP+
Sbjct: 459 AILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPM 517
Query: 479 HPTISIWGALLGACRMHGKTKL-GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATI 537
P+ IW +LL AC HG+ + GK+ A +L + +P++ N+V+LS + +G + A
Sbjct: 518 KPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEE 577
Query: 538 VRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSS 571
VR+ M+ + K G+S I + ++ +Q K S
Sbjct: 578 VRRVMQRRKLNKCYGFSKIEPELQIEDYQGKSWS 611
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 180/622 (28%), Positives = 300/622 (48%), Gaps = 66/622 (10%)
Query: 10 SSLLESAVSTRSPLLG---RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS 66
SS+ S+ + RS L R++++ R P P +L L K+ + A+ +
Sbjct: 16 SSVFPSSDNDRSVQLFNLVRSIYSSSSRPR-VPQPEWLIGELC----KVGKIAEARKLFD 70
Query: 67 LTHLRTVVTWTSLIAGCVNNG--RFVAALLHFVNMRRDCVQPNDFTFPCVFKAS-SSLQM 123
R VVTWT +I G + G R L V+ R++ V T+ + S Q+
Sbjct: 71 GLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVV-----TWTAMVSGYLRSKQL 125
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISN 183
I + + +V + D Y+++G A +FDEMP+RN+ +WN+ +
Sbjct: 126 SIAEMLFQEMPER-----NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKA 180
Query: 184 AVQDGRSLDAVGAFKEF--------------LCVHG-------------EPNSITFCAFL 216
VQ GR +A+ F+ L +G E N I++ A +
Sbjct: 181 LVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMI 240
Query: 217 NACADRLGLHLGRQLHAFIIRSGYREDVSVANGLI---DFYGKCGDIVSSEMVFSRIGRS 273
A + QL + + ++ G I + CG +F R+
Sbjct: 241 TGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACG-------LFDRM--P 291
Query: 274 RRNVVTWCSMLAALVQNHEEERACLVFLQARKEA--EPTDFMISSVLSACAELGGLELGR 331
+NV++W +M+ V+N E E A VF + ++ +P S+LSAC++L GL G+
Sbjct: 292 EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 332 SVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSE--MPQRNIVTWNAMIGGYAH 389
+H L K+ +N V SAL+++Y K G + A ++F + QR++++WN+MI YAH
Sbjct: 352 QIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAH 411
Query: 390 QGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPG 449
G A+ ++ +M G PS VT +++L ACS AG VE GM F+ + +
Sbjct: 412 HGHGKEAIEMYNQMR--KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLR 469
Query: 450 AEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLF 509
EHY C+VDL R+G + FI + S +GA+L AC +H + + K +K+
Sbjct: 470 EEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVL 529
Query: 510 ELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKD 569
E +D+G +V++SN+ A+ G+ EEA +R +MK+ G+KK G SW+ V + H+F D
Sbjct: 530 ETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGD 589
Query: 570 SSHEKNSEIQAMLAKLREEMKK 591
SH + + ++L+ LR +M+K
Sbjct: 590 KSHPQFEALDSILSDLRNKMRK 611
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 257/504 (50%), Gaps = 41/504 (8%)
Query: 128 KQAHALALKGGQIYDVFVGCS--AFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAV 185
KQ HA +K G I D AF S + + A +F + +N WN I
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNY-AYLVFTRINHKNPFVWNTIIRGFS 100
Query: 186 QDGRSLDAVGAFKEFLCVHG--EPNSITFCAFLNACADRLG-LHLGRQLHAFIIRSGYRE 242
+ A+ F + LC +P +T+ + A RLG GRQLH +I+ G +
Sbjct: 101 RSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYG-RLGQARDGRQLHGMVIKEGLED 159
Query: 243 DVSVANGLIDFYGKCG---------------DIV---SSEMVFSRIG-----------RS 273
D + N ++ Y CG D+V S M F++ G
Sbjct: 160 DSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP 219
Query: 274 RRNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRS 332
+RN V+W SM++ V+N + A +F + + K+ +P F + S+L+ACA LG E GR
Sbjct: 220 QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW 279
Query: 333 VHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGD 392
+H V+ + N V +AL+D+Y KCG IE VF P++ + WN+MI G A+ G
Sbjct: 280 IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGF 339
Query: 393 VDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEH 452
+ A+ LF E L G+ P V+ + VL+AC+ +G V F MKE Y IEP +H
Sbjct: 340 EERAMDLFSE--LERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKH 397
Query: 453 YACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELD 512
Y +V++L +GL++ A I+NMP+ IW +LL ACR G ++ K AA+ L +LD
Sbjct: 398 YTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLD 457
Query: 513 PEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSH 572
P+++ +V+LSN AS G +EEA R MK+ ++K VG S I V VH F + +H
Sbjct: 458 PDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTH 517
Query: 573 EKNSEIQAMLAKLREEMK--KAGY 594
K++EI ++L L ++ K+G+
Sbjct: 518 PKSAEIYSLLDILNWDVSTIKSGF 541
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 196/433 (45%), Gaps = 54/433 (12%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRS-------HETPLPSFLCNHLINMYSKLDLLN 59
N L+++ ST L + +HA +I++ + + +F C +M N
Sbjct: 25 NTYLRLIDTQCSTMREL--KQIHASLIKTGLISDTVTASRVLAFCCASPSDM-------N 75
Query: 60 SAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNM--RRDCVQPNDFTFPCVFKA 117
A V + + + W ++I G + A+ F++M V+P T+P VFKA
Sbjct: 76 YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 118 SSSLQMPITGKQAHALALKGG----------------------QIYDVFVGCSAFDM--- 152
L G+Q H + +K G + + +F+G FD+
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195
Query: 153 ------YSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE 206
++K GL A+N+FDEMPQRN +WN+ IS V++GR DA+ F+E +
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
P+ T + LNACA GR +H +I+R+ + + V LID Y KCG I V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ-ARKEAEPTDFMISSVLSACAELG 325
F ++ + W SM+ L N EERA +F + R EP VL+ACA G
Sbjct: 316 FE--CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Query: 326 GLELGRSVHAL-AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVTWNAM 383
+ L K ++ +I + +V++ G G +E AE + MP + + V W+++
Sbjct: 374 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
Query: 384 IGGYAHQGDVDMA 396
+ G+V+MA
Sbjct: 434 LSACRKIGNVEMA 446
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 263/534 (49%), Gaps = 13/534 (2%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
GR+VH +S L S + N LI+ YSK L SA+ + ++ V+W ++I
Sbjct: 170 GRSVHGVAAKSG-LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYS 228
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
+G A+ F NM V+ + T + A ++ + H L +K G + D+
Sbjct: 229 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAH------VSHEPLHCLVVKCGMVNDIS 282
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
V S YS+ G V A ++ Q ++ + +S + G AV F + +
Sbjct: 283 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 342
Query: 205 GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSE 264
+ +++ L+ C + +G LH + I+SG V NGLI Y K D+ +
Sbjct: 343 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 402
Query: 265 MVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE--PTDFMISSVLSACA 322
+F ++ + +++W S+++ VQ+ A VF Q P I+S+L+ C+
Sbjct: 403 FLFEQLQETP--LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 460
Query: 323 ELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNA 382
+L L LG+ +H ++ + FV +AL+D+Y KCG+ AE VF + TWN+
Sbjct: 461 QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNS 520
Query: 383 MIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKE 442
MI GY+ G AL + EM G+ P +T + VLSAC+ G V+ G F +M +
Sbjct: 521 MISGYSLSGLQHRALSCYLEMR--EKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 578
Query: 443 IYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGK 502
+ I P +HYA +V LL R+ L A I M I P ++WGALL AC +H + ++G+
Sbjct: 579 EFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGE 638
Query: 503 VAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWI 556
A K+F LD ++ G +V++SN+ A+ W++ VR MKD G +G S I
Sbjct: 639 YVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 206/440 (46%), Gaps = 27/440 (6%)
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASS----SLQ 122
+T R + + SL+ C++ + + F ++ R + PN FT +A++ S +
Sbjct: 7 ITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFK 66
Query: 123 MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYIS 182
+ + Q H K G V+V S ++Y K G A+ +FDEMP+R+ WNA I
Sbjct: 67 LQVEQVQTHLT--KSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALIC 124
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
++G DA F L P++ T L C + GR +H +SG
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL 184
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
D V N LI FY KC ++ S+E++F + ++ V+W +M+ A Q+ +E A VF
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREM--KDKSTVSWNTMIGAYSQSGLQEEAITVFKN 242
Query: 303 A-RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
K E + I ++LSA +H L VK + +I V ++LV Y +CG
Sbjct: 243 MFEKNVEISPVTIINLLSAHVS------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGC 296
Query: 362 IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
+ +AE++++ Q +IV +++ YA +GD+D+A+ F + T C + V LV +L
Sbjct: 297 LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK-TRQLC-MKIDAVALVGIL 354
Query: 422 SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVD----LLARSGLVDRAYEFIQNMP 477
C ++ ++ GM + Y I+ G VV+ + ++ V+ + +
Sbjct: 355 HGCKKSSHIDIGMSLHG-----YAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ 409
Query: 478 IHPTISIWGALLGACRMHGK 497
P IS W +++ C G+
Sbjct: 410 ETPLIS-WNSVISGCVQSGR 428
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 205/457 (44%), Gaps = 26/457 (5%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
L+N+Y K + SAQ + R V W +LI G NG A F+ M + P+
Sbjct: 91 LLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPS 150
Query: 108 DFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFD 167
T + G+ H +A K G D V + YSK A +F
Sbjct: 151 ATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFR 210
Query: 168 EMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHL 227
EM ++ +WN I Q G +A+ FK + E + +T L+A H+
Sbjct: 211 EMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA-------HV 263
Query: 228 GRQ-LHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAA 286
+ LH +++ G D+SV L+ Y +CG +VS+E +++ + ++V S+++
Sbjct: 264 SHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA--SAKQDSIVGLTSIVSC 321
Query: 287 LVQNHEEERACLVFLQARKEAEPTDFM-ISSVLSACAELGGLELGRSVHALAVKACVDEN 345
+ + + A + F + R+ D + + +L C + +++G S+H A+K+ +
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTK 381
Query: 346 IFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
V + L+ +Y K +E +F ++ + +++WN++I G G A +F +M L
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 406 GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIY----RIEPGAEHYAC--VVDL 459
G+ P +T+ S+L+ CS+ + G KE++ R E++ C ++D+
Sbjct: 442 TG-GLLPDAITIASLLAGCSQLCCLNLG-------KELHGYTLRNNFENENFVCTALIDM 493
Query: 460 LARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
A+ G +A +++ P + W +++ + G
Sbjct: 494 YAKCGNEVQAESVFKSIK-APCTATWNSMISGYSLSG 529
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/497 (29%), Positives = 250/497 (50%), Gaps = 44/497 (8%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPN 107
++++Y K +++ A+ V + V+W ++ + G A++ F M V+P
Sbjct: 203 IVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPL 262
Query: 108 DFTFPCVFKA-SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSK----------- 155
+ T V A S SL + + GK HA+A+K + D V S FDMY K
Sbjct: 263 NHTVSSVMLACSRSLALEV-GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF 321
Query: 156 --------------------TGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVG 195
+GL +AR +FD MP+RN+ +WNA + V +A+
Sbjct: 322 DQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEAL- 380
Query: 196 AFKEFLCVHGEP----NSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLI 251
+FL + + +++T LN C+ + +G+Q H FI R GY +V VAN L+
Sbjct: 381 ---DFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALL 437
Query: 252 DFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD 311
D YGKCG + S+ + F ++ R+ V+W ++L + + E+A F + EA+P+
Sbjct: 438 DMYGKCGTLQSANIWFRQMS-ELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSK 496
Query: 312 FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSE 371
+ ++++L+ CA + L LG+++H ++ ++ + A+VD+Y KC + A +VF E
Sbjct: 497 YTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE 556
Query: 372 MPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVE 431
R+++ WN++I G G LF M L + G+ P +VT + +L AC R G VE
Sbjct: 557 AATRDLILWNSIIRGCCRNGRSKEVFELF--MLLENEGVKPDHVTFLGILQACIREGHVE 614
Query: 432 SGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGA 491
G F SM Y I P EHY C+++L + G + + EF+ MP P + + + A
Sbjct: 615 LGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDA 674
Query: 492 CRMHGKTKLGKVAAEKL 508
C+ + +KLG AA++L
Sbjct: 675 CQRYRWSKLGAWAAKRL 691
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 241/509 (47%), Gaps = 44/509 (8%)
Query: 28 VHAQIIRSHE---TPLPS-FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
V A+ ++SH +PLP FL N I Y K ++ A+ + R +W ++I C
Sbjct: 78 VQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITAC 137
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
NG F M RD V+ + +F V K+ + +Q H +K G +V
Sbjct: 138 AQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNV 197
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
+ S D+Y K + DAR +FDE+ + +WN + ++ G + +AV F + L +
Sbjct: 198 DLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLEL 257
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
+ P + T + + AC+ L L +G+ +HA ++ D V+ + D Y KC + S+
Sbjct: 258 NVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESA 317
Query: 264 EMVFSRI------------------GRSR-----------RNVVTWCSMLAALVQNHEEE 294
VF + G +R RN+V+W +ML V HE +
Sbjct: 318 RRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWD 377
Query: 295 RACLVFLQARKEAEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALV 353
A R+E E D + +L+ C+ + +++G+ H + D N+ V +AL+
Sbjct: 378 EALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALL 437
Query: 354 DLYGKCGSIENAEQVFSEMPQ-RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAP 412
D+YGKCG++++A F +M + R+ V+WNA++ G A G + AL FE M + + P
Sbjct: 438 DMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA---KP 494
Query: 413 SYVTLVSVLSACSRAGAVESG--MHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAY 470
S TL ++L+ C+ A+ G +H F +++ Y+I+ +VD+ ++ D A
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGF-LIRDGYKIDVVIR--GAMVDMYSKCRCFDYAI 551
Query: 471 EFIQNMPIHPTISIWGALLGACRMHGKTK 499
E + I +W +++ C +G++K
Sbjct: 552 EVFKEAATRDLI-LWNSIIRGCCRNGRSK 579
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
L++LL + + LG+A+H +IR + + +++MYSK + A V
Sbjct: 499 LATLLAGCANIPALNLGKAIHGFLIRDG-YKIDVVIRGAMVDMYSKCRCFDYAIEVFKEA 557
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA 117
R ++ W S+I GC NGR F+ + + V+P+ TF + +A
Sbjct: 558 ATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQA 606
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 228/439 (51%), Gaps = 19/439 (4%)
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
KQ HA + G + + + S L A ++ ++P ++ +N IS+ V +
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSY-ALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 188 GRSLDAVGAFKEFLCVHG------EPNSITFCAFLNACADRLGLHL-GRQLHAFIIR--S 238
S AF + + PN T+ + A H GR LHA +++
Sbjct: 85 HNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLE 144
Query: 239 GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHE---EER 295
D V L+ FY CG + + +F RI ++ TW ++LAA + E +E
Sbjct: 145 PVNHDRFVQAALVGFYANCGKLREARSLFERIREP--DLATWNTLLAAYANSEEIDSDEE 202
Query: 296 ACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDL 355
L+F+ R + P + + +++ +CA LG G H +K + N FVG++L+DL
Sbjct: 203 VLLLFM--RMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDL 260
Query: 356 YGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYV 415
Y KCG + A +VF EM QR++ +NAMI G A G + L++ +L S G+ P
Sbjct: 261 YSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYK--SLISQGLVPDSA 318
Query: 416 TLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQN 475
T V +SACS +G V+ G+ IF SMK +Y IEP EHY C+VDLL RSG ++ A E I+
Sbjct: 319 TFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKK 378
Query: 476 MPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEA 535
MP+ P ++W + LG+ + HG + G++A + L L+ E+SGN+V+LSN+ A RW +
Sbjct: 379 MPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDV 438
Query: 536 TIVRKEMKDIGIKKNVGYS 554
R+ MKD + K+ G S
Sbjct: 439 EKTRELMKDHRVNKSPGIS 457
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 196/426 (46%), Gaps = 32/426 (7%)
Query: 26 RAVHAQIIR---SHET-PLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIA 81
+ +HAQII SH T PL L HL S L+ A +L +V + +LI+
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLL--HL----SSTVCLSYALSILRQIPNPSVFLYNTLIS 79
Query: 82 GCVNNGRFVAALLHF------VNMRRDCVQPNDFTFPCVFKASS-SLQMPITGKQAHALA 134
V+N L F ++ R + V+PN+FT+P +FKAS Q G+ HA
Sbjct: 80 SIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHV 139
Query: 135 LKGGQI--YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLD 192
LK + +D FV + Y+ G +AR++F+ + + +LATWN ++ A + +D
Sbjct: 140 LKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLA-AYANSEEID 198
Query: 193 A-VGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLI 251
+ F+ + PN ++ A + +CA+ G H +++++ + V LI
Sbjct: 199 SDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLI 258
Query: 252 DFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL-VQNHEEERACLVFLQARKEAEPT 310
D Y KCG + + VF + S+R+V + +M+ L V +E L + P
Sbjct: 259 DLYSKCGCLSFARKVFDEM--SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPD 316
Query: 311 DFMISSVLSACAELGGLELGRSV-HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVF 369
+SAC+ G ++ G + +++ ++ + LVDL G+ G +E AE+
Sbjct: 317 SATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECI 376
Query: 370 SEMPQR-NIVTWNAMIGGYAHQGDV---DMALGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
+MP + N W + +G GD ++AL + + G +YV L ++ + +
Sbjct: 377 KKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSG---NYVLLSNIYAGVN 433
Query: 426 RAGAVE 431
R VE
Sbjct: 434 RWTDVE 439
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 11/278 (3%)
Query: 25 GRAVHAQIIRSHETPL--PSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAG 82
GRA+HA +++ E P+ F+ L+ Y+ L A+ + + TW +L+A
Sbjct: 132 GRALHAHVLKFLE-PVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 83 CVNNGRFVA---ALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQ 139
N+ + LL F+ M+ V+PN+ + + K+ ++L + G AH LK
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNL 247
Query: 140 IYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKE 199
+ FVG S D+YSK G AR +FDEM QR+++ +NA I G + + +K
Sbjct: 248 TLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKS 307
Query: 200 FLCVHGEPNSITFCAFLNACADRLGLHLGRQL-HAFIIRSGYREDVSVANGLIDFYGKCG 258
+ P+S TF ++AC+ + G Q+ ++ G V L+D G+ G
Sbjct: 308 LISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 259 DIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERA 296
+ +E ++ + N W S L + + + ER
Sbjct: 368 RLEEAEECIKKMP-VKPNATLWRSFLGSSQTHGDFERG 404
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 243/470 (51%), Gaps = 56/470 (11%)
Query: 96 FVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSK 155
+ M + V P+ +TF V KA S L+ G H ++ G + + +V + ++
Sbjct: 100 YTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHAN 159
Query: 156 TGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAF 215
G A +FD+ + + W++ S + G+ +A+ F E
Sbjct: 160 CGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM--------------- 204
Query: 216 LNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR 275
Y++ V+ N +I KC ++ S+ +F R + +
Sbjct: 205 -----------------------PYKDQVA-WNVMITGCLKCKEMDSARELFDRF--TEK 238
Query: 276 NVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM-ISSVLSACAELGGLELGRSVH 334
+VVTW +M++ V + A +F + R E D + I S+LSACA LG LE G+ +H
Sbjct: 239 DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH 298
Query: 335 ALAVK-ACVDENIFVGS----ALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYA- 388
++ A V +I+VG+ AL+D+Y KCGSI+ A +VF + R++ TWN +I G A
Sbjct: 299 IYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLAL 358
Query: 389 --HQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRI 446
+G ++M FEEM + P+ VT + V+ ACS +G V+ G F M+++Y I
Sbjct: 359 HHAEGSIEM----FEEMQ--RLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNI 412
Query: 447 EPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAE 506
EP +HY C+VD+L R+G ++ A+ F+++M I P +W LLGAC+++G +LGK A E
Sbjct: 413 EPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANE 472
Query: 507 KLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWI 556
KL + ++SG++V+LSN+ AS G+W+ VRK D +KK G S I
Sbjct: 473 KLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 149/338 (44%), Gaps = 47/338 (13%)
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
A +FDE+P+ +++ N + + Q + V + E P+ TF L AC+
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWC 281
G H ++R G+ + V N LI F+ CGD+ + +F ++ + V W
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHK--VAWS 182
Query: 282 SMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
SM + + + + A +F + + K
Sbjct: 183 SMTSGYAKRGKIDEAMRLFDE---------------------------------MPYKDQ 209
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
V N+ + L KC +++A ++F ++++VTWNAMI GY + G ALG+F+
Sbjct: 210 VAWNVMITGCL-----KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFK 264
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESG----MHIFESMKEIYRIEPGAEHYACVV 457
EM G P VT++S+LSAC+ G +E+G ++I E+ I G + ++
Sbjct: 265 EMR--DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALI 322
Query: 458 DLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMH 495
D+ A+ G +DRA E + + +S W L+ +H
Sbjct: 323 DMYAKCGSIDRAIEVFRGVK-DRDLSTWNTLIVGLALH 359
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 140/331 (42%), Gaps = 31/331 (9%)
Query: 229 RQLHAFIIRSGYREDVSVANGLIDFYGKC----GDIVSSEMVFSRIGRSRRNVVTWCS-M 283
+Q+HA ++ +G ++SV LI Y G + + +F I + V+ C+ +
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPD---VSICNHV 83
Query: 284 LAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACV 342
L Q+ + E+ ++ + K P + + VL AC++L G + H V+
Sbjct: 84 LRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF 143
Query: 343 DENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEE 402
N +V +AL+ + CG + A ++F + + + V W++M GYA +G +D A+ LF+E
Sbjct: 144 VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 403 MTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLAR 462
M V +++ C + ++S +F+ E + ++
Sbjct: 204 MPY------KDQVAWNVMITGCLKCKEMDSARELFDRF-----TEKDVVTWNAMISGYVN 252
Query: 463 SGLVDRAYEFIQNMPI---HPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNH 519
G A + M HP + +LL AC + G + GK + E S +
Sbjct: 253 CGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIY 312
Query: 520 V------VLSNMLASAGRWEEATIVRKEMKD 544
V L +M A G + A V + +KD
Sbjct: 313 VGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 343
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 133/286 (46%), Gaps = 13/286 (4%)
Query: 58 LNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA 117
++SA+ + + VVTW ++I+G VN G AL F MR P+ T + A
Sbjct: 225 MDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSA 284
Query: 118 SSSLQMPITGKQAHALALKGGQI-YDVFVGC----SAFDMYSKTGLRVDARNMFDEMPQR 172
+ L TGK+ H L+ + ++VG + DMY+K G A +F + R
Sbjct: 285 CAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR 344
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLH 232
+L+TWN I + ++ F+E + PN +TF + AC+ + GR+
Sbjct: 345 DLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYF 403
Query: 233 AFIIRSGYREDVSVANG--LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAA--LV 288
+ ++R Y + ++ + ++D G+ G + + M F + N + W ++L A +
Sbjct: 404 S-LMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFM-FVESMKIEPNAIVWRTLLGACKIY 461
Query: 289 QNHEEERACLVFLQARKEAEPTDF-MISSVLSACAELGGLELGRSV 333
N E + L + ++ E D+ ++S++ ++ + G++ R +
Sbjct: 462 GNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKM 507
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 179/662 (27%), Positives = 294/662 (44%), Gaps = 117/662 (17%)
Query: 29 HAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV--NN 86
H + I+S T L + N L+N+YSK LL A++V R V +W ++IA V NN
Sbjct: 11 HIRSIKSGST-LTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNN 69
Query: 87 GRFVAALLHFVNMRRDCVQPN----------------------------------DFTFP 112
+ L N RD + N DFT
Sbjct: 70 VKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVT 129
Query: 113 CVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFD----- 167
+ K S+ L G+Q H + +K G F S MYSK G + N+F+
Sbjct: 130 TMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVE 189
Query: 168 ----------------------------EMPQRN-LATWNAYISNAVQDGRSLDAVGAFK 198
P+ N +WN I+ Q+G +A+
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALK--- 246
Query: 199 EFLCVHGEPNSI-----TFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDF 253
+ V E N + +F A LN + L +G+++HA ++++G + V++G++D
Sbjct: 247 --MAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDV 304
Query: 254 YGKCGDIVSSEMV------------------FSRIGR-----------SRRNVVTWCSML 284
Y KCG++ +E +S G+ S +N+V W +M
Sbjct: 305 YCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMF 364
Query: 285 AALVQNHEEERACLVFLQA---RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
+ N + + L +A + P ++ SVL AC+ +E G+ +H +++
Sbjct: 365 LGYL-NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTG 423
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
+ + + +A VD+Y KCG++E AE++F +R+ V +NAMI G AH G + FE
Sbjct: 424 ILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE 483
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLA 461
+MT G G P +T +++LSAC G V G F+SM E Y I P HY C++DL
Sbjct: 484 DMTEG--GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYG 541
Query: 462 RSGLVDRAYEFIQNM-PIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHV 520
++ +D+A E ++ + + I GA L AC + T+L K EKL ++ + ++
Sbjct: 542 KAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYI 601
Query: 521 VLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQA 580
++N AS+GRW+E +R +M+ ++ G SW + + H+F + D SH + I A
Sbjct: 602 QIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYA 661
Query: 581 ML 582
ML
Sbjct: 662 ML 663
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 135/324 (41%), Gaps = 47/324 (14%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLS 66
N+LSSL +S +G+ VHA+++++ F+ + ++++Y K + A+
Sbjct: 268 NVLSSL-------KSLKIGKEVHARVLKNGSYS-NKFVSSGIVDVYCKCGNMKYAESAHL 319
Query: 67 LTHLRTVVTWTSLIAGCVNNGRFVAA------------------LLHFVNMRR-DCV--- 104
L + + +S+I G + G+ V A L ++N+R+ D V
Sbjct: 320 LYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLEL 379
Query: 105 ----------QPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYS 154
P+ V A S GK+ H +L+ G + D + + DMYS
Sbjct: 380 ARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYS 439
Query: 155 KTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCA 214
K G A +FD +R+ +NA I+ G + F++ +P+ ITF A
Sbjct: 440 KCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMA 499
Query: 215 FLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG----LIDFYGKCGDIVSSEMVFSRI 270
L+AC R GL L + + + Y ++S G +ID YGK + + + I
Sbjct: 500 LLSACRHR-GLVLEGEKYFKSMIEAY--NISPETGHYTCMIDLYGKAYRLDKAIELMEGI 556
Query: 271 GRSRRNVVTWCSMLAALVQNHEEE 294
+ ++ V + L A N E
Sbjct: 557 DQVEKDAVILGAFLNACSWNKNTE 580
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 321 CAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
C + G L RS+ + + V N LV+LY K G + A VF EM +RN+ +W
Sbjct: 3 CLKDGFLHHIRSIKSGSTLTAVSSN-----QLVNLYSKSGLLREARNVFDEMLERNVYSW 57
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
NA+I Y +V A LFE S +T ++LS ++ ES E
Sbjct: 58 NAVIAAYVKFNNVKEARELFE-----SDNCERDLITYNTLLSGFAKTDGCES--EAIEMF 110
Query: 441 KEIYRIEP 448
E++R E
Sbjct: 111 GEMHRKEK 118
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 235 bits (599), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/442 (33%), Positives = 230/442 (52%), Gaps = 42/442 (9%)
Query: 177 WNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG-LHLGRQLHAFI 235
WN I ++ + + L P+ +T+ FL + RL LG LH +
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTY-PFLMKSSSRLSNRKLGGSLHCSV 134
Query: 236 IRSGYREDVSVANGLIDFYG-------------------------------KCGDIVSSE 264
++SG D+ + N LI YG K GD+VS+
Sbjct: 135 VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSAR 194
Query: 265 MVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK--EAEPTDFMISSVLSACA 322
+VF + S R+VVTW SM+ V+ E +A +F Q + ++ + + SV+ ACA
Sbjct: 195 LVFDEM--SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 252
Query: 323 ELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVF--SEMPQRNIVTW 380
LG L G++VH + + + + ++L+D+Y KCGSI +A VF + + + + + W
Sbjct: 253 HLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 312
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
NA+IGG A G + +L LF +M I P +T + +L+ACS G V+ H F+S+
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMR--ESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL 370
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
KE EP +EHYAC+VD+L+R+GLV A++FI MPI PT S+ GALL C HG +L
Sbjct: 371 KE-SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLEL 429
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKN 560
+ +KL EL P + G +V L+N+ A ++ A +R+ M+ G+KK G+S + +
Sbjct: 430 AETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDG 489
Query: 561 RVHVFQAKDSSHEKNSEIQAML 582
H F A D +H + +I A+L
Sbjct: 490 TRHRFIAHDKTHFHSDKIYAVL 511
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 151/355 (42%), Gaps = 34/355 (9%)
Query: 76 WTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALAL 135
W +I G N+ ++ ++ M R + P+ T+P + K+SS L G H +
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 136 KGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVG 195
K G +D+F+ + MY + AR +FDEMP +NL TWN+ + + G + A
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 196 AFKEF--------------LCVHGE------------------PNSITFCAFLNACADRL 223
F E GE N +T + + ACA
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 224 GLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
L+ G+ +H +I+ V + LID Y KCG I + VF R + + W ++
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 284 LAALVQNHEEERACLVFLQARK-EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACV 342
+ L + + +F + R+ + +P + +L+AC+ G ++ ++
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGA 375
Query: 343 DENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW-NAMIGGYAHQGDVDMA 396
+ + +VD+ + G +++A SEMP + + A++ G + G++++A
Sbjct: 376 EPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 142/324 (43%), Gaps = 43/324 (13%)
Query: 230 QLHAFIIRSGYREDVSVANGLIDF--YGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL 287
++H +I G E+ + + F GD+ + S++ S W ++
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKL--SDPPNYGWNFVIRGF 83
Query: 288 VQNHEEERACLVFLQARKEAEPTDFMISSVL-SACAELGGLELGRSVHALAVKACVDENI 346
+ E++ V++Q + D M L + + L +LG S+H VK+ ++ ++
Sbjct: 84 SNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDL 143
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMT-- 404
F+ + L+ +YG +A ++F EMP +N+VTWN+++ YA GDV A +F+EM+
Sbjct: 144 FICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSER 203
Query: 405 ------------------------------LGSCGIAPSYVTLVSVLSACSRAGAVESGM 434
+GS + VT+VSV+ AC+ GA+ G
Sbjct: 204 DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS--KANEVTMVSVICACAHLGALNRGK 261
Query: 435 HIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI-WGALLGACR 493
+ + +++ + ++D+ A+ G + A+ + T ++ W A++G
Sbjct: 262 TVHRYILDVH-LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLA 320
Query: 494 MHGKTKLGKVAAEKLFE--LDPED 515
HG + K+ E +DP++
Sbjct: 321 SHGFIRESLQLFHKMRESKIDPDE 344
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVN-MRRDCV 104
N +++ Y+K + SA+ V R VVTW+S+I G V G + AL F MR
Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 237
Query: 105 QPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARN 164
+ N+ T V A + L GK H L V + S DMY+K G DA +
Sbjct: 238 KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWS 297
Query: 165 MF--DEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
+F + + + WNA I G +++ F + +P+ ITF L AC+
Sbjct: 298 VFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 214/383 (55%), Gaps = 10/383 (2%)
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSG-YREDVSVANGLIDFYGKCGDIVSSEM 265
P+ +TF + AC +G+Q+H +++++G + D V G++ Y + ++ +
Sbjct: 114 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARK 173
Query: 266 VFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAEL 324
VF I + +VV W ++ V+ VF + K EP +F +++ L+ACA++
Sbjct: 174 VFDEIPQP--DVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQV 231
Query: 325 GGLELGRSVHALAVK-ACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAM 383
G L G+ +H K + ++ ++FVG+ALVD+Y KCG IE A +VF ++ +RN+ +W A+
Sbjct: 232 GALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAAL 291
Query: 384 IGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI 443
IGGYA G A+ E + GI P V L+ VL+AC+ G +E G + E+M+
Sbjct: 292 IGGYAAYGYAKKAMTCLERLERED-GIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350
Query: 444 YRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKV 503
Y I P EHY+C+VDL+ R+G +D A I+ MP+ P S+WGALL CR H +LG++
Sbjct: 351 YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 504 AAEKLFELDP----EDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVK 559
A + L +L+ E+ V LSN+ S R EA+ VR ++ G++K G+S + V
Sbjct: 411 AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 470
Query: 560 NRVHVFQAKDSSHEKNSEIQAML 582
V F + D SH +I ++
Sbjct: 471 GNVTKFVSGDVSHPNLLQIHTVI 493
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 160/331 (48%), Gaps = 11/331 (3%)
Query: 75 TWTSLIAGCVNNGRFVAALLHFVNMRRD---CVQPNDFTFPCVFKASSSLQMPITGKQAH 131
+ ++I C + + L +F+ M ++ + P+ TF + A GKQ H
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 132 ALALKGGQ-IYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
+K G + D V +Y + L +DAR +FDE+PQ ++ W+ ++ V+ G
Sbjct: 140 CWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE-DVSVANG 249
+ + F+E L EP+ + L ACA L G+ +H F+ + + E DV V
Sbjct: 200 SEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTA 259
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERA--CLVFLQARKEA 307
L+D Y KCG I ++ VF ++ +RRNV +W +++ ++A CL L+
Sbjct: 260 LVDMYAKCGCIETAVEVFKKL--TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGI 317
Query: 308 EPTDFMISSVLSACAELGGLELGRS-VHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
+P ++ VL+ACA G LE GRS + + + + S +VDL + G +++A
Sbjct: 318 KPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 367 QVFSEMPQRNIVT-WNAMIGGYAHQGDVDMA 396
+ +MP + + + W A++ G +V++
Sbjct: 378 NLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 190/341 (55%), Gaps = 5/341 (1%)
Query: 248 NGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA 307
++ Y + GDI ++ +F + R+V +W ++LAA QN A +F + E
Sbjct: 197 TAMLSGYARSGDISNAVALFEDM--PERDVPSWNAILAACTQNGLFLEAVSLFRRMINEP 254
Query: 308 --EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENA 365
P + + VLSACA+ G L+L + +HA A + + ++FV ++LVDLYGKCG++E A
Sbjct: 255 SIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEA 314
Query: 366 EQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEM-TLGSCGIAPSYVTLVSVLSAC 424
VF ++++ WN+MI +A G + A+ +FEEM L I P ++T + +L+AC
Sbjct: 315 SSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
Query: 425 SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
+ G V G F+ M + IEP EHY C++DLL R+G D A E + M + +I
Sbjct: 375 THGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAI 434
Query: 485 WGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKD 544
WG+LL AC++HG L +VA + L L+P + G +++N+ G WEEA RK +K
Sbjct: 435 WGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKH 494
Query: 545 IGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKL 585
K G+S I + N VH F + D SH + EI +L L
Sbjct: 495 QNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 148/337 (43%), Gaps = 41/337 (12%)
Query: 99 MRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGG-------------------- 138
+ R +PN F +P V K++ L + H K G
Sbjct: 117 VNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVS 176
Query: 139 ------QIYD------VFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
Q++D V + Y+++G +A +F++MP+R++ +WNA ++ Q
Sbjct: 177 HITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQ 236
Query: 187 DGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
+G L+AV F+ + PN +T L+ACA L L + +HAF R DV
Sbjct: 237 NGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVF 296
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK 305
V+N L+D YGKCG++ + VF S++++ W SM+ + E A VF + K
Sbjct: 297 VSNSLVDLYGKCGNLEEASSVFKMA--SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK 354
Query: 306 ----EAEPTDFMISSVLSACAELGGLELGRSVHALAV-KACVDENIFVGSALVDLYGKCG 360
+ +P +L+AC G + GR L + ++ I L+DL G+ G
Sbjct: 355 LNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
Query: 361 SIENAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMA 396
+ A +V S M + + W +++ G +D+A
Sbjct: 415 RFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLA 451
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 6/221 (2%)
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNM-RRDCVQPNDFTFPCVFKASSSLQMPITGKQ 129
R V +W +++A C NG F+ A+ F M ++PN+ T CV A + K
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR 189
HA A + DVFV S D+Y K G +A ++F +++L WN+ I+ GR
Sbjct: 282 IHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGR 341
Query: 190 SLDAVGAFKEFLCVH---GEPNSITFCAFLNACADRLGLHLGRQLHAFII-RSGYREDVS 245
S +A+ F+E + ++ +P+ ITF LNAC + GR + R G +
Sbjct: 342 SEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIE 401
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAA 286
LID G+ G + V S + + + + W S+L A
Sbjct: 402 HYGCLIDLLGRAGRFDEALEVMSTM-KMKADEAIWGSLLNA 441
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 147/339 (43%), Gaps = 49/339 (14%)
Query: 229 RQLHAFIIRSGYREDVSVANGLIDFYG-KCGDIVSSEMVFSRIGRSRRNVVTWCSMLAA- 286
+Q+ +F+I SG + L+ F + ++ + +F R S N + ++L A
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRF--SFPNTHLYAAVLTAY 98
Query: 287 ---LVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVD 343
L + + + R P F+ VL + L VH K+
Sbjct: 99 SSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFH 158
Query: 344 ENIFVGSALVDLYGKCGS-IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEE 402
+ V +AL+ Y S I A Q+F EM +RN+V+W AM+ GYA GD+ A+ LFE+
Sbjct: 159 LYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFED 218
Query: 403 M----------TLGSC--------------------GIAPSYVTLVSVLSACSRAGAVE- 431
M L +C I P+ VT+V VLSAC++ G ++
Sbjct: 219 MPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL 278
Query: 432 -SGMHIFESMKEIYRIEPGAEHYA--CVVDLLARSGLVDRAYEFIQNMPIHPTISIWGAL 488
G+H F YR + ++ + +VDL + G ++ A + M +++ W ++
Sbjct: 279 AKGIHAFA-----YRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFK-MASKKSLTAWNSM 332
Query: 489 LGACRMHGKTKLGKVAAEKLFELDPED-SGNHVVLSNML 526
+ +HG+++ E++ +L+ D +H+ +L
Sbjct: 333 INCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 208/394 (52%), Gaps = 9/394 (2%)
Query: 165 MFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG 224
+ D+ P L WN + + ++ LDA+ + + P+ + + A
Sbjct: 75 ILDQYPIAFL--WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHD 132
Query: 225 LHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSML 284
LG++LH+ +R G+ D +G I Y K G+ ++ VF R + +W +++
Sbjct: 133 FTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDE--NPERKLGSWNAII 190
Query: 285 AALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVD 343
L A +F+ ++ EP DF + SV ++C LG L L +H ++A +
Sbjct: 191 GGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTE 250
Query: 344 E--NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
E +I + ++L+D+YGKCG ++ A +F EM QRN+V+W++MI GYA G+ AL F
Sbjct: 251 EKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFR 310
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLA 461
+M G+ P+ +T V VLSAC G VE G F MK + +EPG HY C+VDLL+
Sbjct: 311 QMR--EFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLS 368
Query: 462 RSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVV 521
R G + A + ++ MP+ P + +WG L+G C G ++ + A + EL+P + G +VV
Sbjct: 369 RDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVV 428
Query: 522 LSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSW 555
L+N+ A G W++ VRK MK + K YS+
Sbjct: 429 LANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 162/326 (49%), Gaps = 7/326 (2%)
Query: 76 WTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALAL 135
W +++ + + + A+ ++ M R V P+ ++ P V KA+ + GK+ H++A+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 136 KGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVG 195
+ G + D F +Y K G +AR +FDE P+R L +WNA I GR+ +AV
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 196 AFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE--DVSVANGLIDF 253
F + EP+ T + +C L L QLH ++++ E D+ + N LID
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 254 YGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK-EAEPTDF 312
YGKCG + + +F + +RNVV+W SM+ N A F Q R+ P
Sbjct: 265 YGKCGRMDLASHIFEEM--RQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKI 322
Query: 313 MISSVLSACAELGGLELGRSVHALAVKAC-VDENIFVGSALVDLYGKCGSIENAEQVFSE 371
VLSAC G +E G++ A+ ++ + +VDL + G ++ A++V E
Sbjct: 323 TFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEE 382
Query: 372 MPQR-NIVTWNAMIGGYAHQGDVDMA 396
MP + N++ W ++GG GDV+MA
Sbjct: 383 MPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 149/323 (46%), Gaps = 8/323 (2%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
L ++++AV LG+ +H+ +R F + I +Y K +A+ V
Sbjct: 120 LPIVIKAAVQIHDFTLGKELHSVAVRLGFVG-DEFCESGFITLYCKAGEFENARKVFDEN 178
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
R + +W ++I G + GR A+ FV+M+R ++P+DFT V + L
Sbjct: 179 PERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAF 238
Query: 129 QAHALAL--KGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
Q H L K + D+ + S DMY K G A ++F+EM QRN+ +W++ I
Sbjct: 239 QLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAA 298
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
+G +L+A+ F++ PN ITF L+AC + G+ A +++S + + +
Sbjct: 299 NGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGL 357
Query: 247 ANG--LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR 304
++ ++D + G + ++ V + + NV+ W ++ + + E A V
Sbjct: 358 SHYGCIVDLLSRDGQLKEAKKVVEEMPM-KPNVMVWGCLMGGCEKFGDVEMAEWV-APYM 415
Query: 305 KEAEPTDFMISSVLSACAELGGL 327
E EP + + VL+ L G+
Sbjct: 416 VELEPWNDGVYVVLANVYALRGM 438
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 238/497 (47%), Gaps = 46/497 (9%)
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFV-----------GC----- 147
V + F+ V KA S L G Q H K G D+F+ GC
Sbjct: 117 VSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSR 176
Query: 148 ---------------SAFDMYSKTGLRVDARNMFDEMPQ--RNLATWNAYISNAVQDGRS 190
S D Y K GL V AR +FD MP +NL +WN+ IS Q
Sbjct: 177 QMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS-- 234
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGL 250
D V + E + I++ + ++ + + L + R DV +
Sbjct: 235 -DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPR----RDVVTWATM 289
Query: 251 IDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE-- 308
ID Y K G + ++ +F ++ R+VV + SM+A VQN A +F KE+
Sbjct: 290 IDGYAKLGFVHHAKTLFDQM--PHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLL 347
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P D + VL A A+LG L +H V+ +G AL+D+Y KCGSI++A V
Sbjct: 348 PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLV 407
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F + ++I WNAMIGG A G + A + + + + P +T V VL+ACS +G
Sbjct: 408 FEGIENKSIDHWNAMIGGLAIHGLGESAFDML--LQIERLSLKPDDITFVGVLNACSHSG 465
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGAL 488
V+ G+ FE M+ ++IEP +HY C+VD+L+RSG ++ A I+ MP+ P IW
Sbjct: 466 LVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTF 525
Query: 489 LGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIK 548
L AC H + + G++ A+ L + ++V+LSNM AS G W++ VR MK+ I+
Sbjct: 526 LTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIE 585
Query: 549 KNVGYSWIAVKNRVHVF 565
K G SWI + RVH F
Sbjct: 586 KIPGCSWIELDGRVHEF 602
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 133/332 (40%), Gaps = 38/332 (11%)
Query: 48 LINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC-VQP 106
+I+ Y+KL ++ A+ + R VV + S++AG V N + AL F +M ++ + P
Sbjct: 289 MIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLP 348
Query: 107 NDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMF 166
+D T V A + L H ++ +G + DMYSK G A +F
Sbjct: 349 DDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVF 408
Query: 167 DEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLH 226
+ + +++ WNA I G A + + +P+ ITF LNAC+ H
Sbjct: 409 EGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACS-----H 463
Query: 227 LGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAA 286
G + R + L YG DI+ SR G
Sbjct: 464 SGLVKEGLLCFELMRRKHKIEPRL-QHYGCMVDIL------SRSGS------------IE 504
Query: 287 LVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSV-HALAVKACVDEN 345
L +N EE EP D + + L+AC+ E G V L ++A + +
Sbjct: 505 LAKNLIEEMP----------VEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPS 554
Query: 346 IFVGSALVDLYGKCGSIENAEQVFSEMPQRNI 377
+V L ++Y G ++ +V + M +R I
Sbjct: 555 SYV--LLSNMYASFGMWKDVRRVRTMMKERKI 584
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/428 (31%), Positives = 223/428 (52%), Gaps = 36/428 (8%)
Query: 162 ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
A +F + N+ +NA I G L+++ F + T+ L +C+
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWC 281
L G+ +H +IR+G+ + G+++ Y G + ++ VF + S RNVV W
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM--SERNVVVWN 172
Query: 282 SMLAALVQNHEEERACLVFLQARKEA--------------------------------EP 309
M+ + + ER +F Q + + +P
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 310 TDFMISSVLSACAELGGLELGRSVHALAVKACVDEN-IFVGSALVDLYGKCGSIENAEQV 368
+ + +VL A LG L+ G+ +H+ A + + ++ I VG+ALVD Y K G +E A +
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F +M +RN+V+WN +I G A G + + LF+ M + +AP+ T + VL+ CS G
Sbjct: 293 FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAM-IEEGKVAPNEATFLGVLACCSYTG 351
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGAL 488
VE G +F M E +++E EHY +VDL++RSG + A++F++NMP++ ++WG+L
Sbjct: 352 QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSL 411
Query: 489 LGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIK 548
L ACR HG KL +VAA +L +++P +SGN+V+LSN+ A GRW++ VR MK ++
Sbjct: 412 LSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLR 471
Query: 549 KNVGYSWI 556
K+ G S I
Sbjct: 472 KSTGQSTI 479
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 199/451 (44%), Gaps = 47/451 (10%)
Query: 19 TRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTS 78
TR P +HA ++R H + L H I++ L + A V S V+ + +
Sbjct: 18 TRLP----EIHAHLLR-HFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNA 72
Query: 79 LIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGG 138
+I G + +L F +M+ + +++T+ + K+ SSL GK H ++ G
Sbjct: 73 MIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTG 132
Query: 139 --QIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRN----------------------- 173
++ + +G ++Y+ G DA+ +FDEM +RN
Sbjct: 133 FHRLGKIRIG--VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHL 190
Query: 174 --------LATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
+ +WN+ IS+ + GR +A+ F E + +P+ T L A L
Sbjct: 191 FKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVL 250
Query: 226 HLGRQLHAFIIRSG-YREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSML 284
G+ +H+ SG +++ ++V N L+DFY K GD+ ++ +F ++ RRNVV+W +++
Sbjct: 251 DTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM--QRRNVVSWNTLI 308
Query: 285 AALVQNHEEERACLVFLQARKEAE--PTDFMISSVLSACAELGGLELGRSVHALAV-KAC 341
+ N + E +F +E + P + VL+ C+ G +E G + L + +
Sbjct: 309 SGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFK 368
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMALGLF 400
++ A+VDL + G I A + MP N W +++ GDV +A
Sbjct: 369 LEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAA 428
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVE 431
E+ G + +YV L ++ + R VE
Sbjct: 429 MELVKIEPGNSGNYVLLSNLYAEEGRWQDVE 459
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/597 (27%), Positives = 292/597 (48%), Gaps = 42/597 (7%)
Query: 5 PPNL-LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSK-------LD 56
P +L S L+ ++ ++SP L + VHAQ++ + ++ N + +Y K L
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVR-TTYWGNRCLQLYFKSGSVINALQ 60
Query: 57 L------------------------LNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAA 92
L LN+A + R VV+W ++I+G V+ G
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYG 120
Query: 93 LLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALAL-KGGQIYDVFVGCSAFD 151
+ F +M+R ++P +FTF + + ++ G+Q H A+ G Y++ V S D
Sbjct: 121 IRVFFDMQRWEIRPTEFTFSILASLVTCVR---HGEQIHGNAICSGVSRYNLVVWNSVMD 177
Query: 152 MYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSIT 211
MY + G+ A ++F M R++ +WN I + G A+ F + +P+ T
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYT 237
Query: 212 FCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIG 271
++ C+D L G+Q A I+ G+ + V ID + KC + S +F +
Sbjct: 238 VSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL- 296
Query: 272 RSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELG 330
+ + V SM+ + + E A +F+ A ++ P F SSVLS+ + L+ G
Sbjct: 297 -EKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHG 354
Query: 331 RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQ 390
VH+L +K D + V ++L+++Y K GS++ A VF++ ++++ WN +I G A
Sbjct: 355 ADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARN 414
Query: 391 GDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGA 450
+L +F ++ + + P VTL+ +L AC AG V G+ IF SM++ + + PG
Sbjct: 415 SRAVESLAIFNQLLMNQ-SLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGN 473
Query: 451 EHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFE 510
EHYAC+++LL R G+++ A + +P P+ IW +L A G T+L + A+ + E
Sbjct: 474 EHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLE 533
Query: 511 LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQA 567
+P+ S ++VL + RWE + +R M + +K G S I++++ V F+A
Sbjct: 534 SEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 218/401 (54%), Gaps = 14/401 (3%)
Query: 152 MYSKTGLRVDARNMFDEMPQRNLA--TWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNS 209
+Y+ G A +FD M +R+ + WN+ IS + G+ DA+ + + +P+
Sbjct: 136 LYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDR 195
Query: 210 ITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSR 269
TF L AC + +G +H +++ G+ DV V N L+ Y KCGDIV + VF
Sbjct: 196 FTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDM 255
Query: 270 IGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTDFMISSVLSACAELGGLE 328
I ++ V+W SML + + A +F L + EP ISSVL A + +
Sbjct: 256 I--PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFK 310
Query: 329 LGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYA 388
GR +H ++ ++ + V +AL+ LY K G + A +F +M +R+ V+WNA+I ++
Sbjct: 311 HGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHS 370
Query: 389 HQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEP 448
+ L FE+M + P +T VSVLS C+ G VE G +F M + Y I+P
Sbjct: 371 KNSN---GLKYFEQMHRANA--KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
Query: 449 GAEHYACVVDLLARSGLVDRAYEFI-QNMPIHPTISIWGALLGACRMHGKTKLGKVAAEK 507
EHYAC+V+L R+G+++ AY I Q M + ++WGALL AC +HG T +G+VAA++
Sbjct: 426 KMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQR 485
Query: 508 LFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIK 548
LFEL+P++ N +L + + A R E+ VR+ M D G++
Sbjct: 486 LFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 208/447 (46%), Gaps = 45/447 (10%)
Query: 6 PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHL------INMYSKLDLLN 59
P + +SLLE+ S R+ G VH H P P L N+L + +Y+
Sbjct: 92 PEIFASLLETCYSLRAIDHGVRVH------HLIP-PYLLRNNLGISSKLVRLYASCGYAE 144
Query: 60 SAQHVLSLTHLR--TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA 117
A V R + W SLI+G G++ A+ + M D V+P+ FTFP V KA
Sbjct: 145 VAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKA 204
Query: 118 SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATW 177
+ G+ H +K G YDV+V + MY+K G V ARN+FD +P ++ +W
Sbjct: 205 CGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSW 264
Query: 178 NAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIR 237
N+ ++ + G +A+ F+ + EP+ + + L A L GRQLH ++IR
Sbjct: 265 NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIR 321
Query: 238 SGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC 297
G ++SVAN LI Y K G + + +F ++ R+ V+W ++++A H +
Sbjct: 322 RGMEWELSVANALIVLYSKRGQLGQACFIFDQM--LERDTVSWNAIISA----HSKNSNG 375
Query: 298 LVFLQA--RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC-VDENIFVGSALVD 354
L + + R A+P SVLS CA G +E G + +L K +D + + +V+
Sbjct: 376 LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVN 435
Query: 355 LYGKCGSIENA-EQVFSEMP-QRNIVTWNAMIGGYAHQGDVDM----ALGLFEEMTLGSC 408
LYG+ G +E A + EM + W A++ G+ D+ A LFE
Sbjct: 436 LYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE------- 488
Query: 409 GIAP----SYVTLVSVLSACSRAGAVE 431
+ P ++ L+ + S RA VE
Sbjct: 489 -LEPDNEHNFELLIRIYSKAKRAEDVE 514
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 211/383 (55%), Gaps = 10/383 (2%)
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSG-YREDVSVANGLIDFYGKCGDIVSSEM 265
P+ +TF + AC +G+Q+H +++++G + D V G++ Y + + +
Sbjct: 114 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARK 173
Query: 266 VFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAEL 324
VF I + +VV W ++ V+ VF + + EP +F +++ L+ACA++
Sbjct: 174 VFDEIPQP--DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQV 231
Query: 325 GGLELGRSVHALAVKA-CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAM 383
G L G+ +H K ++ ++FVG+ALVD+Y KCG IE A +VF ++ +RN+ +W A+
Sbjct: 232 GALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAAL 291
Query: 384 IGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI 443
IGGYA G A + + GI P V L+ VL+AC+ G +E G + E+M+
Sbjct: 292 IGGYAAYGYAKKATTCLDRIERED-GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 444 YRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKV 503
Y I P EHY+C+VDL+ R+G +D A + I+ MP+ P S+WGALL CR H +LG++
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 504 AAEKLFELDP----EDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVK 559
A + L +L+ E+ V LSN+ S R EA VR ++ GI+K G+S + V
Sbjct: 411 AVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470
Query: 560 NRVHVFQAKDSSHEKNSEIQAML 582
V F + D SH +I ++
Sbjct: 471 GIVTKFVSGDVSHPNLLQIHTLI 493
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 159/331 (48%), Gaps = 11/331 (3%)
Query: 75 TWTSLIAGCVNNGRFVAALLHFVNMRRD---CVQPNDFTFPCVFKASSSLQMPITGKQAH 131
+ ++I C + + L +F+ M ++ + P+ TF + A GKQ H
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 132 ALALKGGQ-IYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
+K G + D V +Y + L DAR +FDE+PQ ++ W+ ++ V+ G
Sbjct: 140 CWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE-DVSVANG 249
+ + FKE L EP+ + L ACA L G+ +H F+ + + E DV V
Sbjct: 200 SEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTA 259
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERA--CLVFLQARKEA 307
L+D Y KCG I ++ VF ++ +RRNV +W +++ ++A CL ++
Sbjct: 260 LVDMYAKCGCIETAVEVFEKL--TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGI 317
Query: 308 EPTDFMISSVLSACAELGGLELGRS-VHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
+P ++ VL+ACA G LE GR+ + + + + S +VDL + G +++A
Sbjct: 318 KPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 367 QVFSEMPQRNIVT-WNAMIGGYAHQGDVDMA 396
+ +MP + + + W A++ G +V++
Sbjct: 378 DLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 210/372 (56%), Gaps = 19/372 (5%)
Query: 228 GRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL 287
GRQ+HA + + G+ + + L+ FY GD+ + VF ++N+V W +M++A
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETP-EKQNIVLWTAMISAY 142
Query: 288 VQNHEEERACLVFLQARKEAEPTDF---MISSVLSACAELGGLELGRSVHALAVKAC--V 342
+N A +F R EAE + +++ LSACA+LG +++G +++ ++K +
Sbjct: 143 TENENSVEAIELF--KRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRL 200
Query: 343 DENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEE 402
++ + ++L+++Y K G E A ++F E ++++ T+ +MI GYA G +L LF++
Sbjct: 201 AMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKK 260
Query: 403 MTL----GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVD 458
M I P+ VT + VL ACS +G VE G F+SM Y ++P H+ C+VD
Sbjct: 261 MKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVD 320
Query: 459 LLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGN 518
L RSG + A+EFI MPI P IW LLGAC +HG +LG+ ++FELD + G+
Sbjct: 321 LFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGD 380
Query: 519 HVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEI 578
+V LSN+ AS G W+E + +R ++ ++ G SWI + + ++ F S N++
Sbjct: 381 YVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIELGSIINEF----VSGPDNNDE 433
Query: 579 QAMLAKLREEMK 590
Q M+ ++ E ++
Sbjct: 434 QLMMGEISEVLR 445
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 172/373 (46%), Gaps = 31/373 (8%)
Query: 43 FLCNHL--INMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVN-M 99
F+ HL + + +K D H SL T+ + + +G + ALL F +
Sbjct: 3 FILRHLHSLGVINKFDSFLLHFHTKSLKSNHTLKQY-------LESGEPIKALLDFRHRF 55
Query: 100 RRDCVQPNDFTFPCVFKASSSLQMP-ITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGL 158
R+ + F+ K SS+ + + G+Q HAL K G + + S YS G
Sbjct: 56 RQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGD 115
Query: 159 RVDARNMFDEMPQR-NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLN 217
AR +FDE P++ N+ W A IS ++ S++A+ FK E + + L+
Sbjct: 116 VDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALS 175
Query: 218 ACADRLGLHLGRQLHAFIIRSGYR--EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR 275
ACAD + +G ++++ I+ R D+++ N L++ Y K G+ + +F R+
Sbjct: 176 ACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE--SMRK 233
Query: 276 NVVTWCSMLAALVQNHEEERACLVFLQARKEAE-------PTDFMISSVLSACAELGGLE 328
+V T+ SM+ N + + + +F + + + P D VL AC+ G +E
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 329 LGRSVHALAVKACVDENIFVGSA----LVDLYGKCGSIENAEQVFSEMPQR-NIVTWNAM 383
G+ + +D N+ A +VDL+ + G +++A + ++MP + N V W +
Sbjct: 294 EGKRHFKSMI---MDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTL 350
Query: 384 IGGYAHQGDVDMA 396
+G + G+V++
Sbjct: 351 LGACSLHGNVELG 363
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/471 (30%), Positives = 225/471 (47%), Gaps = 45/471 (9%)
Query: 75 TWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALA 134
T S+I N+ AL F M V P+ ++F V KA ++ G+Q H L
Sbjct: 107 THNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLF 166
Query: 135 LKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAV 194
+K G + DVFV + ++Y ++G AR + D MP R+ +WN+ +S ++ G +A
Sbjct: 167 IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEAR 226
Query: 195 GAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFY 254
F E +V N +I Y
Sbjct: 227 ALFDEM---------------------------------------EERNVESWNFMISGY 247
Query: 255 GKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA--EPTDF 312
G + ++ VF + R+VV+W +M+ A VF + ++ +P F
Sbjct: 248 AAAGLVKEAKEVFDSM--PVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGF 305
Query: 313 MISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM 372
+ SVLSACA LG L G VH K ++ F+ +ALVD+Y KCG I+ A +VF
Sbjct: 306 TLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRAT 365
Query: 373 PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVES 432
+R++ TWN++I + G AL +F EM G P+ +T + VLSAC+ G ++
Sbjct: 366 SKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE--GFKPNGITFIGVLSACNHVGMLDQ 423
Query: 433 GMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGAC 492
+FE M +YR+EP EHY C+VDLL R G ++ A E + +P + +LLGAC
Sbjct: 424 ARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGAC 483
Query: 493 RMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMK 543
+ G+ + + A +L EL+ DS + +SN+ AS GRWE+ R+ M+
Sbjct: 484 KRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 173/391 (44%), Gaps = 57/391 (14%)
Query: 128 KQAHALALKGGQIYDVFVGCS--AFDMYSKTGLRVD-ARNMFDEMPQRNLATWNAYISNA 184
+QAHA LK G +D F AF + V A ++ + + N T N+ I
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 185 VQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDV 244
A+ F+E L P+ +F L ACA G GRQ+H I+SG DV
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 245 SVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNH--EEERACLVFLQ 302
V N L++ YG+ G + V R+ R+ V+W S+L+A ++ +E RA ++
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRM--PVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 303 ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSI 362
R E +FMIS Y G +
Sbjct: 234 ERN-VESWNFMISG---------------------------------------YAAAGLV 253
Query: 363 ENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLS 422
+ A++VF MP R++V+WNAM+ YAH G + L +F +M L P TLVSVLS
Sbjct: 254 KEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM-LDDSTEKPDGFTLVSVLS 312
Query: 423 ACSRAGAVESG--MHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHP 480
AC+ G++ G +H++ + + IE +VD+ ++ G +D+A E +
Sbjct: 313 ACASLGSLSQGEWVHVY---IDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS-KR 368
Query: 481 TISIWGALLGACRMHGKTKLGKVAAEKLFEL 511
+S W +++ +HG LGK A E E+
Sbjct: 369 DVSTWNSIISDLSVHG---LGKDALEIFSEM 396
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 153/352 (43%), Gaps = 45/352 (12%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
GR +H I+S F+ N L+N+Y + A+ VL +R V+W SL++ +
Sbjct: 159 GRQIHGLFIKSGLVT-DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYL 217
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
G A F M V+ +F I+G
Sbjct: 218 EKGLVDEARALFDEMEERNVESWNFM--------------ISG----------------- 246
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
Y+ GL +A+ +FD MP R++ +WNA ++ G + + F + L
Sbjct: 247 --------YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 205 GE-PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
E P+ T + L+ACA L G +H +I + G + +A L+D Y KCG I +
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 264 EMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACA 322
VF S+R+V TW S+++ L + + A +F + E +P VLSAC
Sbjct: 359 LEVFR--ATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACN 416
Query: 323 ELGGLELGRSVHALAVKAC-VDENIFVGSALVDLYGKCGSIENAEQVFSEMP 373
+G L+ R + + V+ I +VDL G+ G IE AE++ +E+P
Sbjct: 417 HVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP 468
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
L S+L + S S G VH I + H + FL L++MYSK ++ A V T
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDK-HGIEIEGFLATALVDMYSKCGKIDKALEVFRAT 365
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGK 128
R V TW S+I+ +G AL F M + +PN TF V A + + M
Sbjct: 366 SKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGML---D 422
Query: 129 QAHALALKGGQIYDV-----FVGCSAFDMYSKTGLRVDARNMFDEMP 170
QA L +Y V GC D+ + G +A + +E+P
Sbjct: 423 QARKLFEMMSSVYRVEPTIEHYGCMV-DLLGRMGKIEEAEELVNEIP 468
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 200/369 (54%), Gaps = 31/369 (8%)
Query: 317 VLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRN 376
+ +CA L LE + VH +++ + + + ++ ++G+C SI +A++VF M ++
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 377 IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
+ +W+ M+ Y+ G D AL LFEEMT G+ P+ T ++V AC+ G +E
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMT--KHGLKPNEETFLTVFLACATVGGIEEAFLH 359
Query: 437 FESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
F+SMK + I P EHY V+ +L + G + A ++I+++P PT W A+ R+HG
Sbjct: 360 FDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
Query: 497 KTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWI 556
L E + ++DP + V++ + T K K+ +
Sbjct: 420 DIDLEDYMEELMVDVDPSKA----VINKI---------PTPPPKSFKETNM--------- 457
Query: 557 AVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWY 616
V ++ + + ++ + K+ E + M AK K Y PDT L D++ E K + Y
Sbjct: 458 -VTSKSRILEFRNLTFYKD-EAKEMAAK-----KGVVYVPDTRFVLHDIDQEAKEQALLY 510
Query: 617 HSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKD 676
HSE++A+A+G+I P + I KNLR+CGDCH+ IK +S+I+GR +IVRDN RFH FKD
Sbjct: 511 HSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKD 570
Query: 677 GWCSCKDYW 685
G CSC DYW
Sbjct: 571 GKCSCGDYW 579
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
P+ F +CA+ L +++H ++S +R D + N +I +G+C I ++ V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELG 325
F + +++ +W M+ A N + A +F + K +P + +V ACA +G
Sbjct: 294 FDHM--VDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 351
Query: 326 GLELG-------RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNI 377
G+E ++ H ++ K ++G ++ + GKCG + AEQ ++P +
Sbjct: 352 GIEEAFLHFDSMKNEHGISPKT----EHYLG--VLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 378 VTWNAMIGGYAHQGDVDM 395
W AM GD+D+
Sbjct: 406 DFWEAMRNYARLHGDIDL 423
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 208/402 (51%), Gaps = 7/402 (1%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
LGR VH +++ L + + L+ Y++ L SA + + V++WT++I+ C
Sbjct: 202 LGRQVHGNMVKVGVGNL--IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISAC 259
Query: 84 VNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV 143
G + A+ F+ M PN+FT + KA S + G+Q H+L +K DV
Sbjct: 260 SRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDV 319
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
FVG S DMY+K G D R +FD M RN TW + I+ ++G +A+ F+
Sbjct: 320 FVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR 379
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS 263
H N++T + L AC L LG++LHA II++ ++V + + L+ Y KCG+ +
Sbjct: 380 HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA 439
Query: 264 EMVFSRIGRSRRNVVTWCSMLAALVQ-NHEEERACLVFLQARKEAEPTDFMISSVLSACA 322
V ++ R+VV+W +M++ HE E + ++ EP F SS L ACA
Sbjct: 440 FNVLQQL--PSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACA 497
Query: 323 ELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNA 382
L +GRS+H++A K N+FVGSAL+ +Y KCG + A +VF MP++N+V+W A
Sbjct: 498 NSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKA 557
Query: 383 MIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
MI GYA G AL L M + G ++LS C
Sbjct: 558 MIMGYARNGFCREALKLMYRME--AEGFEVDDYIFATILSTC 597
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 242/494 (48%), Gaps = 19/494 (3%)
Query: 8 LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSL 67
LL+ L+S+ R L + +HA ++ + + F N+LI+ +L L A+ V
Sbjct: 87 LLAEWLQSSNGMR---LIKRIHAMALKCFDDQVIYF-GNNLISSCVRLGDLVYARKVFDS 142
Query: 68 THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ-PNDFTFPCVFKASSSLQMPIT 126
+ VTWT++I G + G A F + + ++ N+ F C+ S
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
G+Q H +K G + ++ V S Y++ G A FD M ++++ +W A IS +
Sbjct: 203 GRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSR 261
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
G + A+G F L PN T C+ L AC++ L GRQ+H+ +++ + DV V
Sbjct: 262 KGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFV 321
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF-LQARK 305
L+D Y KCG+I VF G S RN VTW S++AA + E A +F + R+
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFD--GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR 379
Query: 306 EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENA 365
+ + S+L AC +G L LG+ +HA +K +++N+++GS LV LY KCG +A
Sbjct: 380 HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA 439
Query: 366 EQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACS 425
V ++P R++V+W AMI G + G AL +EM G+ P+ T S L AC+
Sbjct: 440 FNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE--GVEPNPFTYSSALKACA 497
Query: 426 RAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIW 485
+ ++ G I K+ + + A ++ + A+ G V A+ +MP +S W
Sbjct: 498 NSESLLIGRSIHSIAKKNHALSNVFVGSA-LIHMYAKCGFVSEAFRVFDSMPEKNLVS-W 555
Query: 486 GALL------GACR 493
A++ G CR
Sbjct: 556 KAMIMGYARNGFCR 569
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 192/372 (51%), Gaps = 11/372 (2%)
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
K+ HA+ALK ++ G + + G V AR +FD MP++N TW A I ++
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 188 GRSLDAVGAFKEFLCVHG--EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
G +A F++++ HG N F LN C+ R LGRQ+H +++ G ++
Sbjct: 162 GLEDEAFALFEDYV-KHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLI 219
Query: 246 VANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARK 305
V + L+ FY +CG++ S+ F + ++V++W ++++A + +A +F+
Sbjct: 220 VESSLVYFYAQCGELTSALRAFDMM--EEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 306 E-AEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
P +F + S+L AC+E L GR VH+L VK + ++FVG++L+D+Y KCG I +
Sbjct: 278 HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 365 AEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
+VF M RN VTW ++I +A +G + A+ LF M + + +T+VS+L AC
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH--LIANNLTVVSILRAC 395
Query: 425 SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISI 484
GA+ G + + + IE + +V L + G A+ +Q +P +S
Sbjct: 396 GSVGALLLGKELHAQIIK-NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS- 453
Query: 485 WGALLGACRMHG 496
W A++ C G
Sbjct: 454 WTAMISGCSSLG 465
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 1/211 (0%)
Query: 11 SLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL 70
S+L + S + LLG+ +HAQII+ + ++ + L+ +Y K A +VL
Sbjct: 390 SILRACGSVGALLLGKELHAQIIK-NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS 448
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQA 130
R VV+WT++I+GC + G AL M ++ V+PN FT+ KA ++ + + G+
Sbjct: 449 RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI 508
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
H++A K + +VFVG + MY+K G +A +FD MP++NL +W A I ++G
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACAD 221
+A+ E + F L+ C D
Sbjct: 569 REALKLMYRMEAEGFEVDDYIFATILSTCGD 599
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 134/283 (47%), Gaps = 12/283 (4%)
Query: 224 GLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
G+ L +++HA ++ + + N LI + GD+V + VF + +N VTW +M
Sbjct: 97 GMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSM--PEKNTVTWTAM 154
Query: 284 LAALVQNHEEERACLVFLQARKEA--EPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
+ ++ E+ A +F K + M +L+ C+ ELGR VH VK
Sbjct: 155 IDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG 214
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFE 401
V N+ V S+LV Y +CG + +A + F M ++++++W A+I + +G A+G+F
Sbjct: 215 VG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFI 273
Query: 402 EMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLA 461
M + P+ T+ S+L ACS A+ G + S+ I+ ++D+ A
Sbjct: 274 GML--NHWFLPNEFTVCSILKACSEEKALRFGRQV-HSLVVKRMIKTDVFVGTSLMDMYA 330
Query: 462 RSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVA 504
+ G + + M T++ W +++ A H + G+ A
Sbjct: 331 KCGEISDCRKVFDGMSNRNTVT-WTSIIAA---HAREGFGEEA 369
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 6 PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVL 65
P SS L++ ++ S L+GR++H+ ++H F+ + LI+MY+K ++ A V
Sbjct: 486 PFTYSSALKACANSESLLIGRSIHSIAKKNHALS-NVFVGSALIHMYAKCGFVSEAFRVF 544
Query: 66 SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQM 123
+ +V+W ++I G NG AL M + + +D+ F + +++
Sbjct: 545 DSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIEL 602
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/532 (28%), Positives = 254/532 (47%), Gaps = 7/532 (1%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVN 85
+ +H+ + +S P F L Y+ D L SA+ + + R+V W S+I
Sbjct: 25 QKLHSFVTKSKLARDPYF-ATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAK 83
Query: 86 NGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFV 145
+F L F + R +P++FT+ C+ + S + H +A+ G +D
Sbjct: 84 AHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQIC 143
Query: 146 GCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG 205
G + YSK GL V+A +F +P +LA WN I G + F
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH 203
Query: 206 EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEM 265
+PN T A + D L + +HAF ++ V L++ Y +C I S+
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 266 VFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAEL 324
VF+ I S ++V S++ + + A +F + R + D +++ VL +CAEL
Sbjct: 264 VFNSI--SEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAEL 321
Query: 325 GGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMI 384
G+ VH+ ++ ++ +I V SAL+D+Y KCG ++ A +F+ +P++NIV++N++I
Sbjct: 322 SDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLI 381
Query: 385 GGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIY 444
G G A F E+ G+ P +T ++L C +G + G IFE MK +
Sbjct: 382 LGLGLHGFASTAFEKFTEIL--EMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEF 439
Query: 445 RIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVA 504
IEP EHY +V L+ +G ++ A+EF+ ++ I GALL C +H T L +V
Sbjct: 440 GIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVV 499
Query: 505 AEKLFELDPE-DSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSW 555
AE + + E S V+LSN+ A GRW+E +R + + K G SW
Sbjct: 500 AENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 174/399 (43%), Gaps = 10/399 (2%)
Query: 114 VFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRN 173
+++ + +Q + ++ H+ K D + Y+ + AR +FD P+R+
Sbjct: 11 IYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERS 70
Query: 174 LATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHA 233
+ WN+ I + + + F + L P++ T+ ++ R +H
Sbjct: 71 VFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHG 130
Query: 234 FIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEE 293
I SG D + ++ Y K G IV + +F I ++ W M+
Sbjct: 131 IAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSI--PDPDLALWNVMILGYGCCGFW 188
Query: 294 ERACLVF-LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSAL 352
++ +F L + +P + + ++ S + L + SVHA +K +D + +VG AL
Sbjct: 189 DKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCAL 248
Query: 353 VDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAP 412
V++Y +C I +A VF+ + + ++V +++I GY+ G+ AL LF E+ + G P
Sbjct: 249 VNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS--GKKP 306
Query: 413 SYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEF 472
V + VL +C+ SG + + + +E + + ++D+ ++ GL+ A
Sbjct: 307 DCVLVAIVLGSCAELSDSVSGKEVHSYVIRL-GLELDIKVCSALIDMYSKCGLLKCAMSL 365
Query: 473 IQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFEL 511
+P +S +LG +HG A EK E+
Sbjct: 366 FAGIPEKNIVSFNSLILGL-GLHG---FASTAFEKFTEI 400
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 11/234 (4%)
Query: 4 HPPNLLS--SLLESAVSTRSPLLGRAVHAQIIR----SHETPLPSFLCNHLINMYSKLDL 57
H PN + +L + L+ +VHA ++ SH S++ L+NMYS+
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSH-----SYVGCALVNMYSRCMC 257
Query: 58 LNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA 117
+ SA V + +V +SLI G G AL F +R +P+ V +
Sbjct: 258 IASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGS 317
Query: 118 SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATW 177
+ L ++GK+ H+ ++ G D+ V + DMYSK GL A ++F +P++N+ ++
Sbjct: 318 CAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 178 NAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQL 231
N+ I G + A F E L + P+ ITF A L C L+ G+++
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 132/413 (31%), Positives = 210/413 (50%), Gaps = 37/413 (8%)
Query: 177 WNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFII 236
+N I + + G ++ F L H +PN++TF + + A + G LH +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI---------------GRSRR------ 275
+ G+ D V + FYG+ GD+ SS +F I GR+
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 276 --------NVVTWCSMLAALVQNHEEERACLVFLQA----RKEAEPTDFMISSVLSACAE 323
+VV+W +++ + +A +VF + R P + SVLS+CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 324 L--GGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWN 381
GG+ LG+ +H + + +G+AL+D+YGK G +E A +F ++ + + WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 382 AMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMK 441
A+I A G AL +FE M S + P+ +TL+++L+AC+R+ V+ G+ +F S+
Sbjct: 294 AIISALASNGRPKQALEMFEMMK--SSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
Query: 442 EIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLG 501
Y+I P +EHY CVVDL+ R+GL+ A FIQ++P P S+ GALLGAC++H T+LG
Sbjct: 352 SEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELG 411
Query: 502 KVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
++L L P+ G +V LS A W EA +RK M + GI+K YS
Sbjct: 412 NTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 150/346 (43%), Gaps = 50/346 (14%)
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQA 130
+T + +LI + G + +L F +M VQPN+ TFP + KA+ S G
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDE---------------------- 168
H ALK G ++D FV S Y + G +R MFD+
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 169 ---------MPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE-----PNSITFCA 214
MP ++ +W I+ + G A+ F E + E PN TF +
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEM--IQNERAVITPNEATFVS 226
Query: 215 FLNACA--DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR 272
L++CA D+ G+ LG+Q+H +++ ++ L+D YGK GD+ + +F +I
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI-- 284
Query: 273 SRRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTDFMISSVLSACAELGGLELGR 331
+ V W ++++AL N ++A +F + P + ++L+ACA ++LG
Sbjct: 285 RDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGI 344
Query: 332 SVHALAVKACVDENIFVGS----ALVDLYGKCGSIENAEQVFSEMP 373
+ + C + I S +VDL G+ G + +A +P
Sbjct: 345 QLFS---SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLP 387
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 6/225 (2%)
Query: 45 CNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNM---RR 101
CN L++ + ++ A + VV+WT++I G G AL+ F M R
Sbjct: 155 CNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNER 214
Query: 102 DCVQPNDFTFPCVFKASSSL-QMPI-TGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLR 159
+ PN+ TF V + ++ Q I GKQ H + I +G + DMY K G
Sbjct: 215 AVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDL 274
Query: 160 VDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNAC 219
A +FD++ + + WNA IS +GR A+ F+ + PN IT A L AC
Sbjct: 275 EMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTAC 334
Query: 220 ADRLGLHLGRQLHAFIIRSGYREDVSVANG-LIDFYGKCGDIVSS 263
A + LG QL + I S G ++D G+ G +V +
Sbjct: 335 ARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDA 379
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 230/466 (49%), Gaps = 8/466 (1%)
Query: 96 FVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSK 155
F +R + + F+F K+ S G+ H +AL+ G + + + Y
Sbjct: 113 FNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCV 172
Query: 156 TGLRVDARNMFDEMPQR-NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCA 214
G DAR +FDEMPQ + T++ ++ +Q + A+ F+ N T +
Sbjct: 173 CGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLS 232
Query: 215 FLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR 274
FL+A +D L H I+ G D+ + LI YGK G I S+ +F R
Sbjct: 233 FLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFD--CAIR 290
Query: 275 RNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSV 333
++VVTW M+ + E + Q + E +P +LS+CA +GR+V
Sbjct: 291 KDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTV 350
Query: 334 HALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDV 393
L + + + +G+ALVD+Y K G +E A ++F+ M +++ +W AMI GY G
Sbjct: 351 ADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLA 410
Query: 394 DMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHY 453
A+ LF +M +C + P+ +T + VL+ACS G V G+ F+ M E Y P EHY
Sbjct: 411 REAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHY 470
Query: 454 ACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDP 513
CVVDLL R+G ++ AYE I+N+PI + W ALL ACR++G LG+ +L E+
Sbjct: 471 GCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGE 530
Query: 514 EDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVK 559
+ ++L+ A AG E++ + E+ +K GYS I ++
Sbjct: 531 THPADAILLAGTHAVAGNPEKS--LDNELNK--GRKEAGYSAIEIE 572
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 12 LLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLR 71
LL S + + +GR V A ++ L + L L++MY+K+ LL A + + +
Sbjct: 334 LLSSCAYSEAAFVGRTV-ADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDK 392
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRD-C-VQPNDFTFPCVFKASS 119
V +WT++I+G +G A+ F M + C V+PN+ TF V A S
Sbjct: 393 DVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 211/423 (49%), Gaps = 39/423 (9%)
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEP-NSITFCAFLNACADRLGLHLGRQL 231
L + +S+ G A+ F + P ++ F L +CA LG +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 232 HAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLA------ 285
HA ++S + + V L+D YGKC + + +F I +RN V W +M++
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEI--PQRNAVVWNAMISHYTHCG 128
Query: 286 --------------------------ALVQNHEEERACLVFLQARKEA--EPTDFMISSV 317
LV + + F + E +P + ++
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLAL 188
Query: 318 LSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI 377
+SAC+ +G L + +H+ A + ++ + + S LV+ YG+CGSI + VF M R++
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDV 248
Query: 378 VTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIF 437
V W+++I YA GD + AL F+EM L + P + ++VL ACS AG + + F
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAK--VTPDDIAFLNVLKACSHAGLADEALVYF 306
Query: 438 ESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGK 497
+ M+ Y + +HY+C+VD+L+R G + AY+ IQ MP PT WGALLGACR +G+
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Query: 498 TKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIA 557
+L ++AA +L ++PE+ N+V+L + S GR EEA +R +MK+ G+K + G SW
Sbjct: 367 IELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCL 426
Query: 558 VKN 560
K+
Sbjct: 427 FKD 429
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 183/420 (43%), Gaps = 51/420 (12%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPND-FTFPCVFKASSSLQMPITGKQAH 131
+++ T ++ N G AL F+ M P D F K+ ++ P+ G H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 132 ALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGR-- 189
A ++K + + FVGC+ DMY K AR +FDE+PQRN WNA IS+ G+
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 190 -------------------------------SLDAVGAFKEFLCVHGEPNSITFCAFLNA 218
S A+ +++ + +PN IT A ++A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 219 CADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV 278
C+ L +++H++ R+ + +GL++ YG+CG IV ++VF + R+VV
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM--EDRDVV 249
Query: 279 TWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLE-----LGRS 332
W S+++A + + E A F + + P D +VL AC+ G + R
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 333 VHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIV-TWNAMIGGYAHQG 391
++A D S LVD+ + G E A +V MP++ TW A++G + G
Sbjct: 310 QGDYGLRASKDHY----SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 392 DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI-YRIEPGA 450
++++A E+ + +YV L + + R E + MKE ++ PG+
Sbjct: 366 EIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQ---EEAERLRLKMKESGVKVSPGS 422
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 167/364 (45%), Gaps = 65/364 (17%)
Query: 268 SRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKE-AEPTDFMISSV-LSACAELG 325
S S +++ L++ E+A +FLQ A P D + S+ L +CA
Sbjct: 3 SSYASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAF 62
Query: 326 GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIG 385
LG SVHA +VK+ N FVG AL+D+YGKC S+ +A ++F E+PQRN V WNAMI
Sbjct: 63 RPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMIS 122
Query: 386 GYAHQGDVDMALGLFEEMTL------------GSCG-------------------IAPSY 414
Y H G V A+ L+E M + G G P+
Sbjct: 123 HYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNL 182
Query: 415 VTLVSVLSACSRAGAVESGMHIFESMKEIYR------IEPGAEHYACVVDLLARSGLVDR 468
+TL++++SACS GA F +KEI+ IEP + + +V+ R G +
Sbjct: 183 ITLLALVSACSAIGA-------FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVY 235
Query: 469 AYEFIQNMPIHPTISIWGALLGACRMHG--KTKLGKVAAEKLFELDPEDSGNHVVLSNML 526
+M ++ W +L+ A +HG ++ L +L ++ P+D + N+L
Sbjct: 236 VQLVFDSMEDRDVVA-WSSLISAYALHGDAESALKTFQEMELAKVTPDD----IAFLNVL 290
Query: 527 AS---AGRWEEATIVRKEMK-DIGIK--KNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQA 580
+ AG +EA + K M+ D G++ K+ + V +RV F+ E IQA
Sbjct: 291 KACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFE------EAYKVIQA 344
Query: 581 MLAK 584
M K
Sbjct: 345 MPEK 348
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 220/409 (53%), Gaps = 12/409 (2%)
Query: 153 YSKTG-LRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFL---CVHGEPN 208
YSK L + ++F MP RN+ +WN I + G + ++ F CV P+
Sbjct: 76 YSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCV--RPD 133
Query: 209 SITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFS 268
T L AC+ G +H ++ G+ + V++ L+ Y G ++ + +F
Sbjct: 134 DFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFD 193
Query: 269 RIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGGL 327
+ R+ V + +M VQ E +F + D ++ S+L AC +LG L
Sbjct: 194 DM--PVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGAL 251
Query: 328 ELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGY 387
+ G+SVH ++ C + +G+A+ D+Y KC ++ A VF M +R++++W+++I GY
Sbjct: 252 KHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGY 311
Query: 388 AHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIE 447
GDV M+ LF+EM GI P+ VT + VLSAC+ G VE F M+E Y I
Sbjct: 312 GLDGDVVMSFKLFDEML--KEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIV 368
Query: 448 PGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEK 507
P +HYA V D ++R+GL++ A +F+++MP+ P ++ GA+L C+++G ++G+ A +
Sbjct: 369 PELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARE 428
Query: 508 LFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWI 556
L +L P + +V L+ + ++AGR++EA +R+ MK+ I K G S I
Sbjct: 429 LIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 194/433 (44%), Gaps = 11/433 (2%)
Query: 4 HPPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLD-LLNSAQ 62
+PP+L S L S + L + + S+ L + L+ YSKL+ L ++
Sbjct: 33 NPPDLFSLLHHSPNAKHLRHLHAHLLRTFLYSNVV-----LSSKLVLAYSKLNHLFPTSL 87
Query: 63 HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNM-RRDCVQPNDFTFPCVFKASSSL 121
V R + +W +I +G ++ F+ M R CV+P+DFT P + +A S+
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 122 QMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYI 181
+ +G H L LK G +FV + MY G + AR +FD+MP R+ + A
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 182 SNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYR 241
VQ G ++ + F+E +S+ + L AC L G+ +H + IR
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 242 EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFL 301
+++ N + D Y KC + + VF + SRR+V++W S++ + + + +F
Sbjct: 268 LGLNLGNAITDMYVKCSILDYAHTVF--VNMSRRDVISWSSLILGYGLDGDVVMSFKLFD 325
Query: 302 QARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
+ KE EP VLSACA G +E L + + + +++ D + G
Sbjct: 326 EMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAG 385
Query: 361 SIENAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
+E AE+ +MP + + A++ G G+V++ + E+ A YVTL
Sbjct: 386 LLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAG 445
Query: 420 VLSACSRAGAVES 432
+ SA R ES
Sbjct: 446 LYSAAGRFDEAES 458
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/564 (26%), Positives = 277/564 (49%), Gaps = 43/564 (7%)
Query: 26 RAVHAQII---RSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAG 82
+ VHAQ++ +H P+ H +S+ +++ + +L + +W L+
Sbjct: 20 KQVHAQLVVNRYNHLEPILVHQTLHFTKEFSR-NIVTYVKRILKGFNGHDSFSWGCLVRF 78
Query: 83 CVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYD 142
+ +F + +++M + P+ V +A ++ + GK HA ALK G
Sbjct: 79 LSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGC 138
Query: 143 VFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLC 202
V+V +YS+ G A+ FD++ ++N +WN+ + ++ G +A F +
Sbjct: 139 VYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI-- 196
Query: 203 VHGEPNSITFCAFL----------NACADRLGLHLGRQLHAFIIRSGY---RE------- 242
E +++++ + NAC+ + L I+ GY RE
Sbjct: 197 --PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTY 254
Query: 243 --DVSVANG-----LIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEER 295
+ NG +I Y K GD+ S+E +F + S+++ + + +M+A QN + +
Sbjct: 255 FDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLM--SKKDKLVYDAMIACYTQNGKPKD 312
Query: 296 ACLVF---LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSAL 352
A +F L+ +P + +SSV+SA ++LG G V + + + + + ++L
Sbjct: 313 ALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSL 372
Query: 353 VDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAP 412
+DLY K G A ++FS + +++ V+++AMI G G A LF M I P
Sbjct: 373 IDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMI--EKKIPP 430
Query: 413 SYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEF 472
+ VT +LSA S +G V+ G F SMK+ + +EP A+HY +VD+L R+G ++ AYE
Sbjct: 431 NVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYEL 489
Query: 473 IQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRW 532
I++MP+ P +WGALL A +H + G++A +L+ + +G L+ + +S GRW
Sbjct: 490 IKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRW 549
Query: 533 EEATIVRKEMKDIGIKKNVGYSWI 556
++A VR +K+ + K +G SW+
Sbjct: 550 DDARTVRDSIKEKKLCKTLGCSWV 573
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 176/409 (43%), Gaps = 32/409 (7%)
Query: 5 PPN--LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQ 62
PP+ ++S+L + + + G+ +HAQ +++ ++ L+ +YS+L + A+
Sbjct: 101 PPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGC-VYVQTGLVGLYSRLGYIELAK 159
Query: 63 HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNM-RRDCVQPN----------DFTF 111
+ V+W SL+ G + +G A F + +D V N D
Sbjct: 160 KAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGN 219
Query: 112 PCVFKASSSLQMP-----ITGKQAHALALKGGQIY-DVFV---GCSAFDM---YSKTGLR 159
C ++ L+ P + G + +K + Y D G S M Y+K G
Sbjct: 220 ACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDV 279
Query: 160 VDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG--EPNSITFCAFLN 217
A +F M +++ ++A I+ Q+G+ DA+ F + L + +P+ IT + ++
Sbjct: 280 QSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVS 339
Query: 218 ACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNV 277
A + G + ++I G + D ++ LID Y K GD + +FS + ++++
Sbjct: 340 ANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNL--NKKDT 397
Query: 278 VTWCSMLAAL-VQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHAL 336
V++ +M+ + E L K+ P + +LSA + G ++ G
Sbjct: 398 VSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNS 457
Query: 337 AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVTWNAMI 384
++ + +VD+ G+ G +E A ++ MP Q N W A++
Sbjct: 458 MKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALL 506
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/547 (28%), Positives = 265/547 (48%), Gaps = 22/547 (4%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
G VH ++I S F+ + L+ +Y+ L L++ A + R + L+
Sbjct: 131 GIQVHCRVI-SLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFC 189
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGG-QIYDV 143
G ++ M + V N T+ + + S ++ GKQ H+L +K G I ++
Sbjct: 190 QTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNI 249
Query: 144 FVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCV 203
FV D YS G + F+ +P++++ +WN+ +S G LD++ F +
Sbjct: 250 FVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFW 309
Query: 204 HGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS---VANGLIDFYGKCGDI 260
P+ F +FLN C+ + G+Q+H ++++ G+ DVS V + LID YGKC I
Sbjct: 310 GKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF--DVSSLHVQSALIDMYGKCNGI 367
Query: 261 VSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLS 319
+S +++ + N+ S++ +L+ + +F E D +S+VL
Sbjct: 368 ENSALLYQSL--PCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLK 425
Query: 320 ACAELGGLELGRS------VHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP 373
A + L L S VH A+K+ ++ V +L+D Y K G E + +VF E+
Sbjct: 426 ALS----LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELD 481
Query: 374 QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG 433
NI ++I GYA G + + EM + P VT++SVLS CS +G VE G
Sbjct: 482 TPNIFCLTSIINGYARNGMGTDCVKMLREMD--RMNLIPDEVTILSVLSGCSHSGLVEEG 539
Query: 434 MHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACR 493
IF+S++ Y I PG + YAC+VDLL R+GLV++A + W +LL +CR
Sbjct: 540 ELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCR 599
Query: 494 MHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGY 553
+H +G+ AAE L L+PE+ ++ +S G +E + +R+ + + +GY
Sbjct: 600 IHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGY 659
Query: 554 SWIAVKN 560
S + VKN
Sbjct: 660 SSVVVKN 666
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 177/376 (47%), Gaps = 17/376 (4%)
Query: 58 LNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA 117
L SA +R VVT+ LI+G G + A+ + M ++ + TFP V
Sbjct: 62 LLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSV 121
Query: 118 SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATW 177
S G Q H + G ++FV + +Y+ L A +FDEM RNLA
Sbjct: 122 CSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVC 181
Query: 178 NAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA-DRLGLHLGRQLHAFII 236
N + Q G S + N +T+C + C+ DRL ++ G+QLH+ ++
Sbjct: 182 NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRL-VYEGKQLHSLVV 240
Query: 237 RSGYR-EDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAAL-----VQN 290
+SG+ ++ VAN L+D+Y CGD+ S F+ + ++V++W S+++ V +
Sbjct: 241 KSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAV--PEKDVISWNSIVSVCADYGSVLD 298
Query: 291 HEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVD-ENIFVG 349
+ + + F R P FM S L+ C+ ++ G+ +H +K D ++ V
Sbjct: 299 SLDLFSKMQFWGKRPSIRP--FM--SFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Query: 350 SALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCG 409
SAL+D+YGKC IEN+ ++ +P N+ N+++ H G + +F M G
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTG 414
Query: 410 IAPSYVTLVSVLSACS 425
I VTL +VL A S
Sbjct: 415 IDE--VTLSTVLKALS 428
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 8/290 (2%)
Query: 150 FDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNS 209
D K+G + A FDEM R++ T+N IS + G SL A+ + E + ++
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 210 ITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEM-VFS 268
TF + L+ C+D L G Q+H +I G+ ++ V + L+ Y C +V + +F
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFD 171
Query: 269 RIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTD-FMISSVLSACAELGGL 327
+ RN+ +L Q E +R V+L+ E + ++ C+ +
Sbjct: 172 EM--LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLV 229
Query: 328 ELGRSVHALAVKACVD-ENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGG 386
G+ +H+L VK+ + NIFV + LVD Y CG + + + F+ +P++++++WN+++
Sbjct: 230 YEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSV 289
Query: 387 YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
A G V +L LF +M G PS +S L+ CSR ++SG I
Sbjct: 290 CADYGSVLDSLDLFSKMQFW--GKRPSIRPFMSFLNFCSRNSDIQSGKQI 337
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 187/365 (51%), Gaps = 13/365 (3%)
Query: 321 CAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
C E GL+ ++VH + ++ L+++Y CG A VF +M ++N+ TW
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
+I +A G + A+ +F G P + AC G V+ G+ FESM
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFK--EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
Y I P E Y +V++ A G +D A EF++ MP+ P + +W L+ R+HG +L
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKN 560
G AE + LDP L R + +++ +KK G VK+
Sbjct: 442 GDYCAEVVEFLDP----------TRLNKQSREGFIPVKASDVEKESLKKRSGI-LHGVKS 490
Query: 561 RVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEK 620
+ F+A D++ +N E+ +L L+ M + GY +T ++L D++ E K + + HSE+
Sbjct: 491 SMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSER 550
Query: 621 IALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCS 680
IA A ++ P + KNLR+C DCH+A+K +S IVGRE+I RD RFH+ K+G C+
Sbjct: 551 IAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACT 610
Query: 681 CKDYW 685
CKDYW
Sbjct: 611 CKDYW 615
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Query: 219 CADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV 278
C + GL + +H I S D+S + L++ Y CG + VF ++ S +N+
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKM--SEKNLE 321
Query: 279 TWCSMLAALVQNHEEERACLVFLQARKEAE-PTDFMISSVLSACAELGGLELG-RSVHAL 336
TWC ++ +N E A +F + ++E P + + AC LG ++ G ++
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 337 AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDM 395
+ + +I +LV++Y G ++ A + MP + N+ W ++ G++++
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 396 A 396
Sbjct: 442 G 442
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 217/433 (50%), Gaps = 10/433 (2%)
Query: 9 LSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLT 68
S+LLE+ V +S L G+ VH I R + FL L++MY+ + AQ V +
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHI-RINGLESNEFLRTKLVHMYTACGSVKDAQKVFDES 172
Query: 69 HLRTVVTWTSLIAGCVNNG--RFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPIT 126
V +W +L+ G V +G R+ L F MR V N ++ VFK+ +
Sbjct: 173 TSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 127 GKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQ 186
G + HALA+K G VF+ S DMY K G AR +FDE+ +R++ W A I+
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 187 DGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRS-GYREDV 244
+ R +A+G F+ + PNS+ L D L LG+++HA +++S Y E
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 245 SVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQAR 304
V +GLID Y KCGD+ S VF G +RN ++W ++++ N ++A + +
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVF--YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQ 410
Query: 305 KEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIE 363
+E P I++VL CAEL ++ G+ +H A+K N+ + ++L+ +Y KCG E
Sbjct: 411 QEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPE 470
Query: 364 NAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
++F + QRN+ W AMI Y D+ + +F M L P VT+ VL+
Sbjct: 471 YPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH--RPDSVTMGRVLTV 528
Query: 424 CSRAGAVESGMHI 436
CS A++ G +
Sbjct: 529 CSDLKALKLGKEL 541
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 202/430 (46%), Gaps = 7/430 (1%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNM-RR 101
FL L++MY K + A+ V R +V W ++IAG +N R AL F M
Sbjct: 250 FLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISE 309
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQ-IYDVFVGCSAFDMYSKTGLRV 160
+ + PN + ++ GK+ HA LK + FV D+Y K G
Sbjct: 310 EKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMA 369
Query: 161 DARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
R +F QRN +W A +S +GR A+ + P+ +T L CA
Sbjct: 370 SGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCA 429
Query: 221 DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTW 280
+ + G+++H + +++ + +VS+ L+ Y KCG +F R+ +RNV W
Sbjct: 430 ELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRL--EQRNVKAW 487
Query: 281 CSMLAALVQNHEEERACLVF-LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVK 339
+M+ V+N + VF L + P + VL+ C++L L+LG+ +H +K
Sbjct: 488 TAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILK 547
Query: 340 ACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGL 399
+ FV + ++ +YGKCG + +A F + + +TW A+I Y A+
Sbjct: 548 KEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINC 607
Query: 400 FEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDL 459
FE+M S G P+ T +VLS CS+AG V+ F M +Y ++P EHY+ V++L
Sbjct: 608 FEQMV--SRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIEL 665
Query: 460 LARSGLVDRA 469
L R G V+ A
Sbjct: 666 LNRCGRVEEA 675
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 166/357 (46%), Gaps = 11/357 (3%)
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVF 144
NN +L ++ R + N TF + +A + + GKQ H G + F
Sbjct: 90 NNLEVALTILDYLEQR--GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 145 VGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDG--RSLDAVGAFKEFLC 202
+ MY+ G DA+ +FDE N+ +WNA + V G R D + F E
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 203 VHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVS 262
+ + N + + A L G + HA I++G V + L+D Y KCG +
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGL 267
Query: 263 SEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPTDFMISSVLSA 320
+ VF I R++V W +M+A L N + A +F + + ++ P +++++L
Sbjct: 268 ARRVFDEI--VERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPV 325
Query: 321 CAELGGLELGRSVHALAVKA-CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVT 379
++ L+LG+ VHA +K+ E FV S L+DLY KCG + + +VF QRN ++
Sbjct: 326 LGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAIS 385
Query: 380 WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
W A++ GYA G D AL M G P VT+ +VL C+ A++ G I
Sbjct: 386 WTALMSGYAANGRFDQALRSIVWMQ--QEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 180/367 (49%), Gaps = 6/367 (1%)
Query: 6 PN--LLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQH 63
PN +L+++L ++ LG+ VHA +++S F+ + LI++Y K + S +
Sbjct: 314 PNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRR 373
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQM 123
V + R ++WT+L++G NGRF AL V M+++ +P+ T V + L+
Sbjct: 374 VFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRA 433
Query: 124 PITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISN 183
GK+ H ALK + +V + S MYSK G+ +FD + QRN+ W A I
Sbjct: 434 IKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDC 493
Query: 184 AVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRED 243
V++ + F+ L P+S+T L C+D L LG++LH I++ +
Sbjct: 494 YVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESI 553
Query: 244 VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ- 302
V+ +I YGKCGD+ S+ F + + + +TW +++ A N A F Q
Sbjct: 554 PFVSARIIKMYGKCGDLRSANFSFDAV--AVKGSLTWTAIIEAYGCNELFRDAINCFEQM 611
Query: 303 ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC-VDENIFVGSALVDLYGKCGS 361
+ P F ++VLS C++ G ++ L ++ + + S +++L +CG
Sbjct: 612 VSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGR 671
Query: 362 IENAEQV 368
+E A+++
Sbjct: 672 VEEAQRL 678
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 135/273 (49%), Gaps = 16/273 (5%)
Query: 199 EFLCVHGEP-NSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKC 257
++L G P N+ TF A L AC R L G+Q+H I +G + + L+ Y C
Sbjct: 100 DYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTAC 159
Query: 258 GDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEE--ERACLVFLQARKEAEPTD-FMI 314
G + ++ VF S NV +W ++L V + ++ + F + R+ + + +
Sbjct: 160 GSVKDAQKVFDESTSS--NVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSL 217
Query: 315 SSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ 374
S+V + A L G HALA+K + ++F+ ++LVD+Y KCG + A +VF E+ +
Sbjct: 218 SNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVE 277
Query: 375 RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGM 434
R+IV W AMI G AH ALGLF M + I P+ V L ++L A++ G
Sbjct: 278 RDIVVWGAMIAGLAHNKRQWEALGLFRTM-ISEEKIYPNSVILTTILPVLGDVKALKLG- 335
Query: 435 HIFESMKEIYRIEPGAEHYACVVDLLARSGLVD 467
KE++ +++Y V SGL+D
Sbjct: 336 ------KEVHAHVLKSKNY--VEQPFVHSGLID 360
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 188/350 (53%), Gaps = 22/350 (6%)
Query: 225 LHLGRQLHAFIIRSGY-REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
L +GR +H + + G+ E + L+ FY K GD+ + VF + R VTW +M
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEM--PERTSVTWNAM 184
Query: 284 LAALVQ-----NHEEERACLVFLQ---ARKEAEPTDFMISSVLSACAELGGLELGRSVHA 335
+ NH +A ++F + PTD + VLSA ++ G LE+G VH
Sbjct: 185 IGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHG 244
Query: 336 LAVKA--CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDV 393
K + ++F+G+ALVD+Y KCG + NA VF M +N+ TW +M G A G
Sbjct: 245 YIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRG 304
Query: 394 DMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHY 453
+ L M GI P+ +T S+LSA G VE G+ +F+SMK + + P EHY
Sbjct: 305 NETPNLLNRM--AESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHY 362
Query: 454 ACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDP 513
C+VDLL ++G + AY+FI MPI P + +L AC ++G+T +G+ + L E++
Sbjct: 363 GCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIER 422
Query: 514 ED---SG----NHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWI 556
ED SG ++V LSN+LA G+W E +RKEMK+ IK GYS++
Sbjct: 423 EDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 101/247 (40%), Gaps = 10/247 (4%)
Query: 24 LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGC 83
+GR VH + + + L++ Y+K L A+ V RT VTW ++I G
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 84 VN-------NGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALK 136
+ N R L + V+P D T CV A S + G H K
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 137 GGQI--YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAV 194
G DVF+G + DMYSK G +A ++F+ M +N+ TW + + +GR +
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 195 GAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQL-HAFIIRSGYREDVSVANGLIDF 253
+PN ITF + L+A + G +L + R G + ++D
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 254 YGKCGDI 260
GK G I
Sbjct: 369 LGKAGRI 375
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 15 SAVSTRSPL-LGRAVHAQIIRSHETP-LPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRT 72
SA+S L +G VH I + TP + F+ L++MYSK LN+A V L ++
Sbjct: 228 SAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKN 287
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA 117
V TWTS+ G NGR M ++PN+ TF + A
Sbjct: 288 VFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 229/483 (47%), Gaps = 48/483 (9%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N LI+ Y K + A+ + +V+W ++I + + AL FV+M
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNM 165
PN T+ V SS +Q+ G+Q H + +K G + +G + D Y+K G D+R
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 166 FDEMPQRNLATWNAYISN-AVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG 224
FD + +N+ WNA +S A +DG + F + L + P TF L +C
Sbjct: 374 FDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALKSCC---- 427
Query: 225 LHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEM------------------- 265
+ +QLH+ I+R GY ++ V + L+ Y K +++ +
Sbjct: 428 VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK-NQLMNDALLLLDWASGPTSVVPLNIVA 486
Query: 266 -VFSRIGRSRRNV-----------VTWCSMLAALVQNHEEERACLVFLQA-RKEAEPTDF 312
++SR G+ +V V+W +AA ++ E +F + P +
Sbjct: 487 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKY 546
Query: 313 MISSVLSACAELGGLELGRSVHALAVK---ACVDENIFVGSALVDLYGKCGSIENAEQVF 369
S+LS C++L L LG S+H L K +C D FV + L+D+YGKCGSI + +VF
Sbjct: 547 TFVSILSLCSKLCDLTLGSSIHGLITKTDFSCAD--TFVCNVLIDMYGKCGSIRSVMKVF 604
Query: 370 SEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGA 429
E ++N++TW A+I G AL F+E S G P V+ +S+L+AC G
Sbjct: 605 EETREKNLITWTALISCLGIHGYGQEALEKFKETL--SLGFKPDRVSFISILTACRHGGM 662
Query: 430 VESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALL 489
V+ GM +F+ MK+ Y +EP +HY C VDLLAR+G + A I+ MP +W L
Sbjct: 663 VKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Query: 490 GAC 492
C
Sbjct: 722 DGC 724
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 200/413 (48%), Gaps = 12/413 (2%)
Query: 17 VSTRSPLLGR--AVHAQIIRSHETPL-PSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTV 73
V ++P R A+HA I L P ++CN++I++Y KL ++ A V R
Sbjct: 21 VCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNK 80
Query: 74 VTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHAL 133
V++ ++I G G A F MR PN T + + +SL + G Q H L
Sbjct: 81 VSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLDVR-AGTQLHGL 138
Query: 134 ALKGGQ-IYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLD 192
+LK G + D FVG +Y + L A +F++MP ++L TWN +S G +
Sbjct: 139 SLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKE 198
Query: 193 AVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLID 252
+ F+E + + +F L + L + +QLH + G ++SV N LI
Sbjct: 199 CMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLIS 258
Query: 253 FYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTD 311
YGKCG+ +E +F G ++V+W +++ A ++ +A +F+ + P
Sbjct: 259 AYGKCGNTHMAERMFQDAG--SWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQ 316
Query: 312 FMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSE 371
SVL + + L GR +H + +K + I +G+AL+D Y KCG++E++ F
Sbjct: 317 GTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDY 376
Query: 372 MPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
+ +NIV WNA++ GYA++ D + L LF +M G P+ T + L +C
Sbjct: 377 IRDKNIVCWNALLSGYANK-DGPICLSLFLQML--QMGFRPTEYTFSTALKSC 426
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 194/379 (51%), Gaps = 25/379 (6%)
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P F I+ + C + L+ + VH + +I ++++++Y CGS+E+A V
Sbjct: 182 PRLFWIAQL---CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTV 238
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F+ MP+RN+ TW +I +A G + A+ F G P + AC G
Sbjct: 239 FNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK--QEGNKPDGEMFKEIFFACGVLG 296
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGAL 488
+ G+ FESM + Y I P EHY +V +LA G +D A F+++M P + +W L
Sbjct: 297 DMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETL 354
Query: 489 LGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAG--RWEEATIVRKEMKDIG 546
+ R+HG LG + + +LD N + AG + + +V+++++ +
Sbjct: 355 MNLSRVHGDLILGDRCQDMVEQLD-------ASRLNKESKAGLVPVKSSDLVKEKLQRMA 407
Query: 547 IKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLE 606
N G ++A A D S +N E+ L L+E M + GY P + L+L D++
Sbjct: 408 KGPNYGIRYMA---------AGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVD 458
Query: 607 DEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVR 666
E K ++ H+E+ A + P IR+ KNLR+C DCH+A+K +S+IVGRE+I R
Sbjct: 459 QESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISR 518
Query: 667 DNNRFHRFKDGWCSCKDYW 685
D RFH KDG CSC++YW
Sbjct: 519 DAKRFHHMKDGVCSCREYW 537
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 13/181 (7%)
Query: 219 CADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV 278
C D L + +H FI S D+S N +I+ Y CG + + VF+ + RN+
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSM--PERNLE 248
Query: 279 TWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELG----RSV 333
TWC ++ +N + E A F + ++E +P M + AC LG + G S+
Sbjct: 249 TWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESM 308
Query: 334 HA-LAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGD 392
+ + C++ + +LV + + G ++ A + F E + N+ W ++ GD
Sbjct: 309 YKEYGIIPCMEHYV----SLVKMLAEPGYLDEALR-FVESMEPNVDLWETLMNLSRVHGD 363
Query: 393 V 393
+
Sbjct: 364 L 364
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 178/322 (55%), Gaps = 10/322 (3%)
Query: 241 REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQ-NHEEERACLV 299
+ DV N LID K +IV + +F + R++V+W S+++ Q NH E L
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSM--PLRDLVSWNSLISGYAQMNHCREAIKLF 237
Query: 300 FLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKC 359
+P + I S LSACA+ G + G+++H + + + F+ + LVD Y KC
Sbjct: 238 DEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKC 297
Query: 360 GSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
G I+ A ++F + + TWNAMI G A G+ ++ + F +M S GI P VT +S
Sbjct: 298 GFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMV--SSGIKPDGVTFIS 355
Query: 420 VLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPI- 478
VL CS +G V+ ++F+ M+ +Y + +HY C+ DLL R+GL++ A E I+ MP
Sbjct: 356 VLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKD 415
Query: 479 ---HPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEA 535
+ W LLG CR+HG ++ + AA ++ L PED G + V+ M A+A RWEE
Sbjct: 416 GGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEV 475
Query: 536 TIVRKEM-KDIGIKKNVGYSWI 556
VR+ + +D +KKNVG+S +
Sbjct: 476 VKVREIIDRDKKVKKNVGFSKV 497
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 153/342 (44%), Gaps = 44/342 (12%)
Query: 96 FVNMRRDCVQPNDFTFPCVFKASSSLQMP--ITGKQAHALALKGGQIYDVFVGCSAFDMY 153
FV MRR V P+ TFP VFKA ++ + K H AL+ G + D+F + +Y
Sbjct: 103 FVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVY 162
Query: 154 S-------------------------------KTGLRVDARNMFDEMPQRNLATWNAYIS 182
S K V AR +FD MP R+L +WN+ IS
Sbjct: 163 SLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLIS 222
Query: 183 NAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRE 242
Q +A+ F E + + +P+++ + L+ACA G+ +H + R
Sbjct: 223 GYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFI 282
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
D +A GL+DFY KCG I ++ +F S + + TW +M+ L + E F +
Sbjct: 283 DSFLATGLVDFYAKCGFIDTAMEIFELC--SDKTLFTWNAMITGLAMHGNGELTVDYFRK 340
Query: 303 ARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVG--SALVDLYGKC 359
+P SVL C+ G ++ R++ +++ D N + + DL G+
Sbjct: 341 MVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD-QMRSLYDVNREMKHYGCMADLLGRA 399
Query: 360 GSIENAEQVFSEMPQ-----RNIVTWNAMIGGYAHQGDVDMA 396
G IE A ++ +MP+ ++ W+ ++GG G++++A
Sbjct: 400 GLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIA 441
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 147/334 (44%), Gaps = 53/334 (15%)
Query: 213 CAFL-NACADRLGLHLGRQLHAFIIRSG-----YREDVSVANGLIDFYGKCGDIVSSEMV 266
C++L C LH Q HA I SG ++++ AN L +S+ V
Sbjct: 7 CSYLLKLCRTLKHLH---QFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEV 63
Query: 267 FS---RIGRSRRNVVTWC-SMLAALVQNHEEER--ACLVFLQARKEAEPTDF-MISSVLS 319
S + R N T+C + + + HE + F++ R+ + P DF V
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 320 ACA--ELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI 377
ACA + G L L +++H A++ + ++F + L+ +Y I++A Q+F E PQR++
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV 183
Query: 378 VT-------------------------------WNAMIGGYAHQGDVDMALGLFEEMTLG 406
VT WN++I GYA A+ LF+EM
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV-- 241
Query: 407 SCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLV 466
+ G+ P V +VS LSAC+++G + G I + K R+ + +VD A+ G +
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR-KRLFIDSFLATGLVDFYAKCGFI 300
Query: 467 DRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
D A E + + T+ W A++ MHG +L
Sbjct: 301 DTAMEIFE-LCSDKTLFTWNAMITGLAMHGNGEL 333
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 6/246 (2%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQ 105
N LI+ K + A+ + LR +V+W SLI+G A+ F M ++
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 106 PNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNM 165
P++ A + GK H + D F+ D Y+K G A +
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 166 FDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
F+ + L TWNA I+ G V F++ + +P+ +TF + L C+ +
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 226 HLGRQLHAFIIRSGY--REDVSVANGLIDFYGKCGDI-VSSEMV--FSRIGRSRRNVVTW 280
R L +RS Y ++ + D G+ G I ++EM+ + G +R ++ W
Sbjct: 367 DEARNLFD-QMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 281 CSMLAA 286
+L
Sbjct: 426 SGLLGG 431
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 25 GRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCV 84
G+A+H R + SFL L++ Y+K +++A + L +T+ TW ++I G
Sbjct: 268 GKAIHDYTKRKR-LFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLA 326
Query: 85 NNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDV- 143
+G + +F M ++P+ TF V S + +A L + +YDV
Sbjct: 327 MHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV---DEARNLFDQMRSLYDVN 383
Query: 144 ----FVGCSAFDMYSKTGLRVDARNMFDEMPQ 171
GC A D+ + GL +A M ++MP+
Sbjct: 384 REMKHYGCMA-DLLGRAGLIEEAAEMIEQMPK 414
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 252/553 (45%), Gaps = 69/553 (12%)
Query: 75 TWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALA 134
+W++++ G + L V + D +P+ + + S + +Q H
Sbjct: 23 SWSTIVPALARFGS-IGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 135 LKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAV 194
K G + + + S Y + DA +FDEMP ++ +WN+ +S VQ GR + +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 195 GAFKEFLCVHGEPNSITFCAFLNACADRLGLH-LGRQLHAFIIRSGYRE-DVSVANGLID 252
F E PN +F A L ACA RL L LG +H+ +++ G + +V V N LID
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACA-RLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 253 FYGKCGDIVSSEMVF------------------SRIGR-----------SRRNVVTWCSM 283
YGKCG + + +VF SR G+ + VT+ +
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNEL 260
Query: 284 LAALVQNHEEERACLV------------------FLQARKEAEPTDFM------------ 313
+ A V++ + A V ++ + K E T+F
Sbjct: 261 IDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDE 320
Query: 314 --ISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSE 371
+S VL+A A L + G +HA A K +D + V SAL+D+Y KCG +++AE +F
Sbjct: 321 YSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWT 380
Query: 372 MPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGA-V 430
MP++N++ WN MI GYA GD A+ LF ++ + P T +++L+ CS +
Sbjct: 381 MPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERF-LKPDRFTFLNLLAVCSHCEVPM 439
Query: 431 ESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLG 490
E + FE M YRI+P EH ++ + + G V +A + IQ W ALLG
Sbjct: 440 EVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLG 499
Query: 491 ACRMHGKTKLGKVAAEKLFELDPEDSGN--HVVLSNMLASAGRWEEATIVRKEMKDIGIK 548
AC K K A K+ EL D ++V+SN+ A RW E +RK M++ G+
Sbjct: 500 ACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVL 559
Query: 549 KNVGYSWIAVKNR 561
K VG SWI + +
Sbjct: 560 KEVGSSWIDSRTK 572
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 190/384 (49%), Gaps = 32/384 (8%)
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQD 187
KQ H +K D + + S G A +F+++ + TWN I + +
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 188 GRSLDAVGAFKEFLCVH-GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSV 246
+ +A+ F + H + + TF + AC + LG Q+H I++G+ DV
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 247 ANGLIDFYGKCGDIVSSEMVFSRI-GRS----------------------------RRNV 277
N L+D Y KCG S VF ++ GRS RNV
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 278 VTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHAL 336
V+W +M+ A V+N + A +F + + + +P +F I ++L A +LG L +GR VH
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 337 AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMA 396
A K + F+G+AL+D+Y KCGS+++A +VF M +++ TWN+MI G + A
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 397 LGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV 456
L LFEEM + + P +T V VLSAC+ G V+ G+ F M ++Y I P EH AC+
Sbjct: 337 LSLFEEMEEEA-SVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACM 395
Query: 457 VDLLARSGLVDRAYEFIQNMPIHP 480
+ LL ++ V++A +++M P
Sbjct: 396 IQLLEQALEVEKASNLVESMDSDP 419
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 162/389 (41%), Gaps = 52/389 (13%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVN 85
+ +H +II+ H L LI++ S A V + + TW +I
Sbjct: 37 KQIHTKIIK-HNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSV 95
Query: 86 NGRFVAALLHFVNMR-RDCVQPNDFTFPCVFKA---SSSLQMPITGKQAHALALKGGQIY 141
N + ALL F+ M Q + FTFP V KA SSS+++ G Q H LA+K G
Sbjct: 96 NHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRL---GTQVHGLAIKAGFFN 152
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFD-------------------------------EMP 170
DVF + D+Y K G R +FD +MP
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 171 QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQ 230
RN+ +W A I+ V++ R +A F+ +PN T L A L +GR
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRW 272
Query: 231 LHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQN 290
+H + ++G+ D + LID Y KCG + + VF + +++ TW SM+ +L +
Sbjct: 273 VHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM--QGKSLATWNSMITSLGVH 330
Query: 291 HEEERACLVFLQARKEA--EPTDFMISSVLSACAELGGLELG-----RSVHALAVKACVD 343
E A +F + +EA EP VLSACA G ++ G R + + +
Sbjct: 331 GCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIRE 390
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEM 372
N + ++ L + +E A + M
Sbjct: 391 HN----ACMIQLLEQALEVEKASNLVESM 415
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 143/316 (45%), Gaps = 44/316 (13%)
Query: 215 FLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR 274
FL C++ L +Q+H II+ D + LI G+ + +VF+++
Sbjct: 26 FLRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQL--QS 80
Query: 275 RNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPTDFMISSVLSACAELGGLELGRS 332
+ TW M+ +L NH+ A L+F + +++ F V+ AC + LG
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 333 VHALAVKACVDENIFVGSALVDLYGKCG-------------------------------S 361
VH LA+KA ++F + L+DLY KCG
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 362 IENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
+++AE VF++MP RN+V+W AMI Y D A LF M + + P+ T+V++L
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD--VKPNEFTIVNLL 258
Query: 422 SACSRAGAVESGMHIFE-SMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHP 480
A ++ G++ G + + + K + ++ ++D+ ++ G + A + M
Sbjct: 259 QASTQLGSLSMGRWVHDYAHKNGFVLDCFLG--TALIDMYSKCGSLQDARKVFDVMQ-GK 315
Query: 481 TISIWGALLGACRMHG 496
+++ W +++ + +HG
Sbjct: 316 SLATWNSMITSLGVHG 331
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 180/365 (49%), Gaps = 18/365 (4%)
Query: 321 CAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
C + LE R VH + ++ +A++++Y C S+++A +VF EMP+ N T
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTL 188
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
M+ + + G + A+ LF G P+ V S C+ G V+ G F++M
Sbjct: 189 CVMMRCFVNNGYGEEAIDLFTR--FKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAM 246
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
Y I P EHY V +LA SG +D A F++ MP+ P++ +W L+ R+HG +L
Sbjct: 247 YREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVEL 306
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKN 560
G AE + +LD + V + ++A+ + V+KE ++ Y +
Sbjct: 307 GDRCAELVEKLDA-TRLDKVSSAGLVATKA----SDFVKKEPS----TRSEPYFY----- 352
Query: 561 RVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEK 620
F+ DSSH + + I L LR ++K+ GY PDT + E +++ + E+
Sbjct: 353 --STFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREE 410
Query: 621 IALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCS 680
IA+ L+ I + N+RI GDCH +K +S I GR++I RD +H FK+G C
Sbjct: 411 IAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCR 470
Query: 681 CKDYW 685
C + W
Sbjct: 471 CNNLW 475
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 197/406 (48%), Gaps = 39/406 (9%)
Query: 193 AVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLID 252
A+G + + L P+S TF + ++ + G+ H I+ G + + V N L+
Sbjct: 102 ALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMH 161
Query: 253 FYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ-ARKEAEPTD 311
Y CG + ++ +F I +R++V+W S++A +V+N + A +F + K +
Sbjct: 162 MYTCCGALDLAKKLFVEI--PKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWN 219
Query: 312 FMISS-------------------------------VLSACAELGGLELGRSVHALAVKA 340
MIS+ +L+AC L+ GRSVHA ++
Sbjct: 220 IMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRT 279
Query: 341 CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLF 400
++ ++ + +AL+D+YGKC + A ++F + RN VTWN MI + G + L LF
Sbjct: 280 FLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELF 339
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
E M G + P VT V VL C+RAG V G + M + ++I+P H C+ +L
Sbjct: 340 EAMINGM--LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLY 397
Query: 461 ARSGLVDRAYEFIQNMP---IHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSG 517
+ +G + A E ++N+P + P + W LL + R G LG+ A+ L E DP +
Sbjct: 398 SSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYK 457
Query: 518 NHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVH 563
+ +L N+ + GRWE+ VR+ +K+ I + G + +K VH
Sbjct: 458 YYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 128/320 (40%), Gaps = 35/320 (10%)
Query: 92 ALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGG---------QIYD 142
AL + ++ R P+ +TF + +GK H A+K G +
Sbjct: 102 ALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMH 161
Query: 143 VFVGCSAFDMYSKTGLRVDARN----------------------MFDEMPQRNLATWNAY 180
++ C A D+ K + + R+ +FDEMP +N+ +WN
Sbjct: 162 MYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIM 221
Query: 181 ISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGY 240
IS + ++ F+E + + N T LNAC L GR +HA +IR+
Sbjct: 222 ISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFL 281
Query: 241 REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVF 300
V + LID YGKC ++ + +F + S RN VTW M+ A + E +F
Sbjct: 282 NSSVVIDTALIDMYGKCKEVGLARRIFDSL--SIRNKVTWNVMILAHCLHGRPEGGLELF 339
Query: 301 -LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC-VDENIFVGSALVDLYGK 358
P + VL CA G + G+S ++L V + N + +LY
Sbjct: 340 EAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSS 399
Query: 359 CGSIENAEQVFSEMPQRNIV 378
G E AE+ +P ++
Sbjct: 400 AGFPEEAEEALKNLPDEDVT 419
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 1/155 (0%)
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQA 130
+ +++W +I+ + ++ F M R Q N+ T + A G+
Sbjct: 213 KNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSV 272
Query: 131 HALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRS 190
HA ++ V + + DMY K AR +FD + RN TWN I GR
Sbjct: 273 HASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRP 332
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGL 225
+ F+ + P+ +TF L CA R GL
Sbjct: 333 EGGLELFEAMINGMLRPDEVTFVGVLCGCA-RAGL 366
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 181/366 (49%), Gaps = 19/366 (5%)
Query: 321 CAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTW 380
C E+ LE R VH +D + ++++Y C S ++A VF+EMP+RN TW
Sbjct: 122 CGEVEALEEARVVHDCITP--LDARSY--HTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
MI A G+ + A+ +F G P +V AC G + G+ FESM
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFI--EEGNKPDKEIFKAVFFACVSIGDINEGLLHFESM 235
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
Y + E Y V+++LA G +D A +F++ M + P++ +W L+ C + G +L
Sbjct: 236 YRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLEL 295
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNM-LASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVK 559
G AE + +LD SN L +A + A KE++ + ++ K
Sbjct: 296 GDRFAELIKKLDASRMSKE---SNAGLVAAKASDSAMEKLKELRYCQMIRD------DPK 346
Query: 560 NRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSE 619
R+H F+A D+SH + L+ +M G+ P T + +E+EEK ++ + S
Sbjct: 347 KRMHEFRAGDTSHLGTV---SAFRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSN 403
Query: 620 KIALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWC 679
K+A A +I P+ + +N+R C D H+ K IS I GR +I RD ++H +K+G C
Sbjct: 404 KLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVC 463
Query: 680 SCKDYW 685
SCKDYW
Sbjct: 464 SCKDYW 469
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 182/357 (50%), Gaps = 43/357 (12%)
Query: 239 GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACL 298
G+ V V L+ Y G+++ + VF + RN VTW M+ L + E+A L
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEM--PERNPVTWNVMITGLTNLGDFEKA-L 209
Query: 299 VFLQ-----------------AR----KEA-------------EPTDFMISSVLSACAEL 324
FL+ AR KEA +P + I ++L A L
Sbjct: 210 CFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNL 269
Query: 325 GGLELGRSVHA-LAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP--QRNIVTWN 381
G L++ SVHA + + V +I V ++L+D Y KCG I++A + F E+P ++N+V+W
Sbjct: 270 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 382 AMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG-AVESGMHIFESM 440
MI +A G A+ +F++M G+ P+ VT++SVL+ACS G A E + F +M
Sbjct: 330 TMISAFAIHGMGKEAVSMFKDME--RLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
Y+I P +HY C+VD+L R G ++ A + +PI +W LLGAC ++ +L
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAEL 447
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIA 557
+ KL EL+ G++V++SN+ GR+ +A RK+M G+ K G+S +
Sbjct: 448 AERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQVT 504
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 159/344 (46%), Gaps = 42/344 (12%)
Query: 94 LHFVNMRRDCVQPND-FTFPCVFKASSSLQMP--ITGKQAHALALKGGQIYDVFVGCSAF 150
LHF++ + P D FT+ + KASS+ + P + G H L LK G V+V +
Sbjct: 106 LHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALV 165
Query: 151 DMYSKTGLRVDARNMFDEMPQRNLATWNAYIS--------------------------NA 184
MY G +DA +FDEMP+RN TWN I+
Sbjct: 166 GMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTT 225
Query: 185 VQDG-----RSLDAVGAFKEFL-CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRS 238
+ DG + +A+ F + C +PN IT A L A + L + +HA++ +
Sbjct: 226 IIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKR 285
Query: 239 GYRE-DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERAC 297
G+ D+ V N LID Y KCG I S+ F I R+N+V+W +M++A + + A
Sbjct: 286 GFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAV 345
Query: 298 LVFLQA-RKEAEPTDFMISSVLSACAELGGL---ELGRSVHALAVKACVDENIFVGSALV 353
+F R +P + SVL+AC+ GGL E + + + + ++ LV
Sbjct: 346 SMFKDMERLGLKPNRVTMISVLNACSH-GGLAEEEFLEFFNTMVNEYKITPDVKHYGCLV 404
Query: 354 DLYGKCGSIENAEQVFSEMP-QRNIVTWNAMIGGYAHQGDVDMA 396
D+ + G +E AE++ E+P + V W ++G + D ++A
Sbjct: 405 DMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 101/223 (45%), Gaps = 9/223 (4%)
Query: 71 RTVVTWTSLIAGCVNNGRFVAALLHFVNMRR-DCVQPNDFTFPCVFKASSSLQMPITGKQ 129
RTVV+WT++I G + A+L F M D ++PN+ T + A +L
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 130 AHALALKGGQIY-DVFVGCSAFDMYSKTGLRVDARNMFDEMP--QRNLATWNAYISNAVQ 186
HA K G + D+ V S D Y+K G A F E+P ++NL +W IS
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 187 DGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAF-IIRSGYR--ED 243
G +AV FK+ + +PN +T + LNAC+ GL L F + + Y+ D
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHG-GLAEEEFLEFFNTMVNEYKITPD 396
Query: 244 VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAA 286
V L+D + G + +E + I + VV W +L A
Sbjct: 397 VKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVV-WRMLLGA 438
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 339 KACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALG 398
K + +++V +ALV +Y G++ +A +VF EMP+RN VTWN MI G + GD + AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 399 LFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVD 458
E+M + V+ +++ +R + + +F M I+P ++
Sbjct: 211 FLEKMP------NRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILP 264
Query: 459 LLARSG---LVDRAYEFIQNMPIHP-TISIWGALLGACRMHGKTKLGKVAAEKLFELDPE 514
+ G + + ++ P I + +L+ A G + +A K F P
Sbjct: 265 AVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQ----SAFKFFIEIPN 320
Query: 515 DSGNHVVLSNMLAS---AGRWEEATIVRKEMKDIGIKKN 550
N V + M+++ G +EA + K+M+ +G+K N
Sbjct: 321 GRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPN 359
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 201/450 (44%), Gaps = 79/450 (17%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD 102
++ N +++MY K + + SA+ V R W +I+G G A F D
Sbjct: 137 YVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF-----D 191
Query: 103 CVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDA 162
+ ND S + ITG ++K +A
Sbjct: 192 MMPENDVV---------SWTVMITG-------------------------FAKVKDLENA 217
Query: 163 RNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADR 222
R FD MP++++ +WNA +S Q+G + DA+ F + L + PN T+ ++AC+ R
Sbjct: 218 RKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFR 277
Query: 223 LGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR-------- 274
L R L I R + V L+D + KC DI S+ +F+ +G R
Sbjct: 278 ADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAM 337
Query: 275 ----------------------RNVVTWCSMLAALVQNHEEERACLVF--LQARKEAEPT 310
RNVV+W S++A N + A F + +++P
Sbjct: 338 ISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPD 397
Query: 311 DFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFS 370
+ + SVLSAC + LELG + K + N +L+ +Y + G++ A++VF
Sbjct: 398 EVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFD 457
Query: 371 EMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAV 430
EM +R++V++N + +A GD L L +M GI P VT SVL+AC+RAG +
Sbjct: 458 EMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK--DEGIEPDRVTYTSVLTACNRAGLL 515
Query: 431 ESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
+ G IF+S++ P A+HYAC +DLL
Sbjct: 516 KEGQRIFKSIR-----NPLADHYAC-MDLL 539
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 132/309 (42%), Gaps = 54/309 (17%)
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
P++ +F + + A R G+ A + + G+ +D V N ++D Y K + S+ V
Sbjct: 104 PDAFSFPVVIKS-AGRFGI----LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKV 158
Query: 267 FSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGG 326
F +I S+R W M++ + +E AC +F D M
Sbjct: 159 FDQI--SQRKGSDWNVMISGYWKWGNKEEACKLF----------DMM------------- 193
Query: 327 LELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGG 386
+ ++ + ++ + K +ENA + F MP++++V+WNAM+ G
Sbjct: 194 ---------------PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
Query: 387 YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRI 446
YA G + AL LF +M G+ P+ T V V+SACS + + + E R+
Sbjct: 239 YAQNGFTEDALRLFNDML--RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE-KRV 295
Query: 447 EPGAEHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKV-AA 505
++D+ A+ + A + + W A++ G T++G + +A
Sbjct: 296 RLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMIS-----GYTRIGDMSSA 350
Query: 506 EKLFELDPE 514
+LF+ P+
Sbjct: 351 RQLFDTMPK 359
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 30/257 (11%)
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P F V+ + G L AL K ++ +V + ++D+Y K S+E+A +V
Sbjct: 104 PDAFSFPVVIKSAGRFGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKV 158
Query: 369 FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
F ++ QR WN MI GY G+ + A LF+ M V+ +++ ++
Sbjct: 159 FDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDV------VSWTVMITGFAKVK 212
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM---PIHPTISIW 485
+E+ F+ M E + ++ A++G + A +M + P + W
Sbjct: 213 DLENARKYFDRMP-----EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 486 GALLGACRMHGKTKLG----KVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKE 541
++ AC L K+ EK L N V + +L + + R+
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRL------NCFVKTALLDMHAKCRDIQSARRI 321
Query: 542 MKDIGIKKNVGYSWIAV 558
++G ++N+ +W A+
Sbjct: 322 FNELGTQRNL-VTWNAM 337
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 188/439 (42%), Gaps = 80/439 (18%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSL---THLRTVVTWTSLIAG 82
R VHAQI+R L S + L++ S LL S + LS+ + R +LI G
Sbjct: 46 RHVHAQILR--RGVLSSRVAAQLVSCSS---LLKSPDYSLSIFRNSEERNPFVLNALIRG 100
Query: 83 CVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYD 142
N RF +++ HF+ M R V+P+ TFP V K++S L G+ HA LK D
Sbjct: 101 LTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCD 160
Query: 143 VFVGCSAFDMYSKTGLRVDARNMFDE---------------------------------- 168
FV S DMY+KTG A +F+E
Sbjct: 161 SFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFR 220
Query: 169 -MPQRNLATWNAYISNAV-------------------------------QDGRSLDAVGA 196
MP+RN +W+ I V Q G A+
Sbjct: 221 SMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAIST 280
Query: 197 FKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGK 256
+ E L +PN T A L+AC+ L G ++H +I+ +G + D ++ L+D Y K
Sbjct: 281 YFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAK 340
Query: 257 CGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE-PTDFMIS 315
CG++ + VFS + + +++++W +M+ + +A F Q E P + +
Sbjct: 341 CGELDCAATVFSNM--NHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFL 398
Query: 316 SVLSACAELGGLELGRS-VHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP- 373
+VL+AC ++LG + ++ + ++ + +VDL G+ G + A ++ MP
Sbjct: 399 AVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPI 458
Query: 374 QRNIVTWNAMIGG-YAHQG 391
++ TW A+ AH+G
Sbjct: 459 NPDLTTWAALYRACKAHKG 477
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 77/110 (70%)
Query: 576 SEIQAMLAKLREEMKKAGYFPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPHGVP 635
S+ L L +E++ AGY P+T L D+++E K + +HSE++A+AFG+I P G
Sbjct: 130 SKAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTT 189
Query: 636 IRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCSCKDYW 685
IR+ KNLRICGDCH+ IK +S I REIIVRDN RFH F+DG CSC DYW
Sbjct: 190 IRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 134/539 (24%), Positives = 237/539 (43%), Gaps = 45/539 (8%)
Query: 45 CNHLINMYSKLDLLNSAQHVLSLT----HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMR 100
CN ++ S +D + A +LSL VVT+ +LI G G A F M
Sbjct: 255 CNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 101 RDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRV 160
+ ++P+ + + M G + + AL G DV V S D+Y K+G
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 161 DARNMFDEM----PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFL 216
A ++ M N+ T+ I QDGR +A G + + L EP+ +T+ + +
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433
Query: 217 NACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFS--RIGRS- 273
+ L G L+ +I+ GY DV + L+D K G ++ + M FS +G+S
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA-MRFSVKMLGQSI 492
Query: 274 RRNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPTDFMISSVLSA-------CAELG 325
R NVV + S++ + + + A VF L +P ++V+ C +
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK 552
Query: 326 GLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM----PQRNIVTWN 381
+G + L + + +I V + ++ L KC IE+A + F+ + + +IVT+N
Sbjct: 553 P-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 382 AMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMK 441
MI GY +D A +FE + + G P+ VTL ++ + ++ + +F M
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFG--PNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 442 EIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP---IHPTISIWGALLGACRMHGKT 498
E +P A Y C++D ++S ++ +++ + M I P+I + ++ G
Sbjct: 670 EKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII-----DGLC 723
Query: 499 KLGKV-AAEKLF------ELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKN 550
K G+V A +F +L P D + +L GR EA ++ + M G+K +
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLP-DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 136/567 (23%), Positives = 237/567 (41%), Gaps = 72/567 (12%)
Query: 45 CNHLINMYSKLDLLNSAQHVLSLT----HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMR 100
CN ++ S +D + A +LSL VVT+ +LI G G A F M
Sbjct: 255 CNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 101 RDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRV 160
+ ++P+ + + M G + + AL G DV V S D+Y K+G
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 161 DARNMFDEM----PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFL 216
A ++ M N+ T+ I QDGR +A G + + L EP+ +T+ + +
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433
Query: 217 NACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFS--RIGRS- 273
+ L G L+ +I+ GY DV + L+D K G ++ + M FS +G+S
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA-MRFSVKMLGQSI 492
Query: 274 RRNVVT-------WCS-----------------------------MLAALVQNHEEERAC 297
R NVV WC M ++++ EE
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 298 LVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYG 357
L F + EP +++ A + +G + L + + +I V + ++ L
Sbjct: 553 LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 612
Query: 358 KCGSIENAEQVFSEM----PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPS 413
KC IE+A + F+ + + +IVT+N MI GY +D A +FE + + G P+
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG--PN 670
Query: 414 YVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFI 473
VTL ++ + ++ + +F M E +P A Y C++D ++S ++ +++
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 474 QNMP---IHPTISIWGALLGACRMHGKTKLGKV-AAEKLF------ELDPEDSGNHVVLS 523
+ M I P+I + ++ G K G+V A +F +L P D + +L
Sbjct: 730 EEMQEKGISPSIVSYSIII-----DGLCKRGRVDEATNIFHQAIDAKLLP-DVVAYAILI 783
Query: 524 NMLASAGRWEEATIVRKEMKDIGIKKN 550
GR EA ++ + M G+K +
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 220/528 (41%), Gaps = 77/528 (14%)
Query: 48 LINMYSKLDLLNSAQHVL----SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC 103
LIN + + L A VL L + +VT +SL+ G ++ R A+ M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALAL------KGGQIYDVFVGCSAFDMYSKTG 157
QPN TF + + + K + A+AL KG Q V G + K G
Sbjct: 182 YQPNTVTFNTLIHG-----LFLHNKASEAMALIDRMVAKGCQPDLVTYGV-VVNGLCKRG 235
Query: 158 LRVDARNMFDEMPQRNLA----TWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFC 213
A N+ ++M Q L +N I + DA+ FKE PN +T+
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 214 AFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSR-IGR 272
+ ++ + +L + +I DV + LID + K G +V +E ++ + R
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 273 S-RRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGR 331
S ++VT+ S++ + + A +F +FM+S
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMF----------EFMVS---------------- 389
Query: 332 SVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGY 387
K C ++ + L+ + K +E +VF EM QR N VT+N +I G
Sbjct: 390 -------KHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 388 AHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIE 447
GD DMA +F+EM S G+ P+ +T ++L + G +E M +FE ++ ++E
Sbjct: 442 FQAGDCDMAQEIFKEMV--SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKME 498
Query: 448 PGAEHYACVVDLLARSGLVDRAYEFIQNMP---IHPTISIWGALL-GACRMHGKTKLGKV 503
P Y +++ + ++G V+ ++ N+ + P + + ++ G CR K K
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR-----KGSKE 553
Query: 504 AAEKLFELDPED-----SGNHVVLSNMLASAGRWEEATIVRKEMKDIG 546
A+ LF+ ED SG + L G E + + KEM+ G
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 159/363 (43%), Gaps = 27/363 (7%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA 132
V+ + ++I G AL F M ++PN T+ + + G+ + A
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY-----GRWSDA 310
Query: 133 LALKGGQIY-----DVFVGCSAFDMYSKTGLRVDARNMFDEMPQR----NLATWNAYISN 183
L I DVF + D + K G V+A ++DEM +R ++ T+++ I+
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 184 AVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYRED 243
R +A F+ + H P+ +T+ + + G ++ + + G +
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 244 VSVANGLIDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAALVQNHEEERACLVF- 300
N LI + GD ++ +F + N++T+ ++L L +N + E+A +VF
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 301 -LQARKEAEPTDFMISSVLSACAELGGLELGRSVHA-LAVKACVDENIFVGSALVDLYGK 358
LQ R + EPT + + ++ + G +E G + L++K V ++ + ++ + +
Sbjct: 491 YLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCR 548
Query: 359 CGSIENAEQVFSEMPQRNIVT----WNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSY 414
GS E A+ +F EM + + +N +I GD + + L +EM SCG A
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR--SCGFAGDA 606
Query: 415 VTL 417
T+
Sbjct: 607 STI 609
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 179/435 (41%), Gaps = 35/435 (8%)
Query: 144 FVGCSAFDM---YSKTGLRV----DARNMFDEM----PQRNLATWNAYISNAVQDGRSLD 192
F G +++D S+ GL DA +F EM P ++ ++ +S A+ D
Sbjct: 40 FSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLS-AIAKMNKFD 98
Query: 193 AVGAFKEFLCVHGEP-NSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLI 251
V + E + G P N T+ +N R L L + +++ GY ++ + L+
Sbjct: 99 VVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLL 158
Query: 252 DFYGKCGDIVSSEMVFSR--IGRSRRNVVTWCSMLAAL-VQNHEEERACLVFLQARKEAE 308
+ Y I + + + + + N VT+ +++ L + N E L+ K +
Sbjct: 159 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 218
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P V++ + G +L ++ + ++ + + + ++D K +++A +
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 369 FSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
F EM + N+VT++++I + G A L +M I P T +++ A
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI--ERKINPDVFTFSALIDAF 336
Query: 425 SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRA---YEFIQNMPIHPT 481
+ G + +++ M + I+P Y+ +++ +D A +EF+ + P
Sbjct: 337 VKEGKLVEAEKLYDEMVK-RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 482 ISIWGALL-GACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLA----SAGRWEEAT 536
+ + L+ G C K K + E E+ + V N+L AG + A
Sbjct: 396 VVTYNTLIKGFC----KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 537 IVRKEMKDIGIKKNV 551
+ KEM G+ N+
Sbjct: 452 EIFKEMVSDGVPPNI 466
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 176/389 (45%), Gaps = 20/389 (5%)
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLH 232
N+ +N I + + +AVG K+ +P+ +T+C + +G ++
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 233 AFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI---GRSRRNVVTWCSMLAALVQ 289
++ + + + L++ K G I + + R+ G S N+ + +++ +L +
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP-NLFVYNALIDSLCK 379
Query: 290 NHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFV 348
+ A L+F + K P D S ++ G L+ S V + +++
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439
Query: 349 GSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMT 404
++L++ + K G I AE +EM + +VT+ +++GGY +G ++ AL L+ EMT
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 405 LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSG 464
GIAPS T ++LS RAG + + +F M E + ++P Y +++ G
Sbjct: 500 --GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEG 556
Query: 465 LVDRAYEFIQNMP---IHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVV 521
+ +A+EF++ M I P + L+ + G+ KV + L + + E N +
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE--LNEIC 614
Query: 522 LSNML---ASAGRWEEATIVRKEMKDIGI 547
+ +L G+ EEA V +EM G+
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGV 643
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 122/257 (47%), Gaps = 16/257 (6%)
Query: 159 RVD-ARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGE------PNSIT 211
R+D R MFD MP R+ +W ++ G DA F L H + P+ I
Sbjct: 138 RLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSML-KHSQKGAFKIPSWIL 196
Query: 212 FCAFLNACADRLGLHLGRQLHAFIIRSGY--REDVSVANGLIDFYGKCGDIVSSEMVFSR 269
C L ACA LG+Q+HA + G+ ED ++ LI FYG+ + + +V +
Sbjct: 197 GCV-LKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQ 255
Query: 270 IGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMI-SSVLSACAELG-GL 327
+ S N V W + + + E + F++ + + S+VL AC+ + G
Sbjct: 256 L--SNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGG 313
Query: 328 ELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVF-SEMPQRNIVTWNAMIGG 386
G+ VHA A+K + + + L+++YGK G +++AE+VF S + ++ WNAM+
Sbjct: 314 RSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVAS 373
Query: 387 YAHQGDVDMALGLFEEM 403
Y G A+ L +M
Sbjct: 374 YMQNGIYIEAIKLLYQM 390
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 13/272 (4%)
Query: 28 VHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNG 87
+ I++S P +F+ N L+ M+ L+ + + R +W + GC+ G
Sbjct: 110 LQVHIMKSSIRPTITFI-NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 88 RFVAALLHFVNMRRDCVQPNDFTFP-----CVFKASSSLQMPITGKQAHALALKGGQI-- 140
+ A FV+M + Q F P CV KA + ++ GKQ HAL K G I
Sbjct: 169 DYEDAAFLFVSMLKHS-QKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDE 227
Query: 141 YDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEF 200
D ++ S Y + DA + ++ N W A ++N ++G + + F E
Sbjct: 228 EDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIE- 286
Query: 201 LCVHG-EPNSITFCAFLNACA-DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCG 258
+ HG + N F L AC+ G G+Q+HA I+ G+ D + LI+ YGK G
Sbjct: 287 MGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYG 346
Query: 259 DIVSSEMVFSRIGRSRRNVVTWCSMLAALVQN 290
+ +E VF + + +V W +M+A+ +QN
Sbjct: 347 KVKDAEKVF-KSSKDETSVSCWNAMVASYMQN 377
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 24/288 (8%)
Query: 221 DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTW 280
D+ G H +L I++S R ++ N L+ + CG + + +F R+ R+ +W
Sbjct: 103 DQRGAH---ELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRM--PHRDFHSW 157
Query: 281 CSMLAALVQNHEEERACLVFLQARKEAEPTDFMISS-----VLSACAELGGLELGRSVHA 335
+ ++ + E A +F+ K ++ F I S VL ACA + ELG+ VHA
Sbjct: 158 AIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHA 217
Query: 336 LAVKACV--DENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDV 393
L K +E+ ++ +L+ YG+ +E+A V ++ N V W A + +G+
Sbjct: 218 LCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEF 277
Query: 394 DMALGLFEEMTLGSCGIAPSYVTLVSVLSACS-RAGAVESGMHIFESMKEIYRIEPGAEH 452
+ F EM G+ GI + +VL ACS + SG + + I+ G E
Sbjct: 278 QEVIRDFIEM--GNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANA-----IKLGFES 330
Query: 453 YACV----VDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHG 496
+ +++ + G V A + ++ ++S W A++ + +G
Sbjct: 331 DCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 5 PPNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPL----PSFLCNHLINMYSKLDLLNS 60
P +L +L++ R LG+ VHA H+ S+L LI Y + L
Sbjct: 192 PSWILGCVLKACAMIRDFELGKQVHAL---CHKLGFIDEEDSYLSGSLIRFYGEFRCLED 248
Query: 61 AQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSS 120
A VL V W + + G F + F+ M ++ N F V KA S
Sbjct: 249 ANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSW 308
Query: 121 L-QMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMF-DEMPQRNLATWN 178
+ +G+Q HA A+K G D + C +MY K G DA +F + +++ WN
Sbjct: 309 VSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWN 368
Query: 179 AYISNAVQDGRSLDAV 194
A +++ +Q+G ++A+
Sbjct: 369 AMVASYMQNGIYIEAI 384
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 162/358 (45%), Gaps = 17/358 (4%)
Query: 128 KQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQR----NLATWNAYISN 183
K+ A GG V+ + Y ++GL +A ++F+ M + NL T+NA I
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312
Query: 184 AVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFLNACADRLGL-HLGRQLHAFIIRSGYR 241
+ G V F + + +G +P+ ITF + L C+ R GL R L +
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS-RGGLWEAARNLFDEMTNRRIE 371
Query: 242 EDVSVANGLIDFYGKCG--DIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLV 299
+DV N L+D K G D+ + + R NVV++ +++ + + A +
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 300 FLQARKEAEPTDFM-ISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGK 358
F + R D + +++LS ++G E + + +++ +AL+ YGK
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 359 CGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSY 414
G + ++VF+EM + N++T++ +I GY+ G A+ +F E S G+
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK--SAGLRADV 549
Query: 415 VTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEF 472
V +++ A + G V S + + + M + I P Y ++D RS +DR+ ++
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTK-EGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 12/248 (4%)
Query: 313 MISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM 372
+ S+++S G + + + + A ++ SAL+ YG+ G E A VF+ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 373 PQR----NIVTWNAMIGGYAHQG-DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRA 427
+ N+VT+NA+I G + F+EM G+ P +T S+L+ CSR
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN--GVQPDRITFNSLLAVCSRG 352
Query: 428 GAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP---IHPTISI 484
G E+ ++F+ M RIE Y ++D + + G +D A+E + MP I P +
Sbjct: 353 GLWEAARNLFDEMTN-RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 485 WGALLGACRMHGK-TKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMK 543
+ ++ G+ + + E + D ++ L ++ GR EEA + +EM
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 544 DIGIKKNV 551
+GIKK+V
Sbjct: 472 SVGIKKDV 479
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 140/328 (42%), Gaps = 21/328 (6%)
Query: 239 GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAALVQNHEEERA 296
GY V + LI YG+ G + VF+ + R N+VT+ +++ A + E +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 297 CLVFLQ--ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVD 354
F R +P +S+L+ C+ G E R++ +++++F + L+D
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 355 LYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGI 410
K G ++ A ++ ++MP + N+V+++ +I G+A G D AL LF EM GI
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY--LGI 440
Query: 411 APSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAY 470
A V+ ++LS ++ G E + I M + I+ Y ++ + G D
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 471 EFIQNMP---IHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLA 527
+ M + P + + L+ + K L K A E E VVL + L
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDG---YSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 528 SA----GRWEEATIVRKEMKDIGIKKNV 551
A G A + EM GI NV
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNV 584
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 178/444 (40%), Gaps = 48/444 (10%)
Query: 72 TVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKA--SSSLQMPITGKQ 129
TV +++LI+ +G A+ F +M+ ++PN T+ V A ++ K
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 130 AHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLA----TWNAYISNAV 185
+ G Q D S + S+ GL ARN+FDEM R + ++N +
Sbjct: 327 FDEMQRNGVQP-DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 186 QDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVS 245
+ G+ A + PN +++ ++ A L + G D
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 246 VANGLIDFYGKCG------DIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLV 299
N L+ Y K G DI+ EM I +++VVT+ ++L + + + V
Sbjct: 446 SYNTLLSIYTKVGRSEEALDIL-REMASVGI---KKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 300 FLQARKEAEPTDFMISSVLSACAELGGL-----ELGRSVHALAVKACVDENIFVGSALVD 354
F + ++E + + S L GGL E+ R + ++A ++ + SAL+D
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA----DVVLYSALID 557
Query: 355 LYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGI 410
K G + +A + EM + N+VT+N++I + +D + + G
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS------ADYSNGGS 611
Query: 411 APSYVTLVSVLSACSRAGAVE-SGMHIFESMKEIYR-IEPGAEHYACVVDLLARSGLVDR 468
P + +S L+ ++ G ES + E G + +C++++ +
Sbjct: 612 LPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRK------ 665
Query: 469 AYEFIQNMPIHPTISIWGALLGAC 492
+ + I P + + A+L AC
Sbjct: 666 ----MHQLEIKPNVVTFSAILNAC 685
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 111/535 (20%), Positives = 219/535 (40%), Gaps = 64/535 (11%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMP-------- 124
V ++TSLI+ N+GR+ A+ F M D +P T+ + + P
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 125 ------------------ITGKQAHALALKGGQI----------YDVFVGCSAFDMYSKT 156
IT + +L + Q+ YD + D+Y K+
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 157 GLRVDARNMFDEMP----QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG-EPNSIT 211
+A + +EM ++ T+N+ IS +DG LD K + G +P+ T
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM-LDEAMELKNQMAEKGTKPDVFT 386
Query: 212 FCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI- 270
+ L+ + + + +G + ++ N I YG G +F I
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 271 --GRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGL 327
G S ++VTW ++LA QN + VF + ++ P ++++SA + G
Sbjct: 447 VCGLS-PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 328 ELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP----QRNIVTWNAM 383
E +V+ + A V ++ + ++ + G E +E+V +EM + N +T+ ++
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 384 IGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEI 443
+ YA+ ++ + L EE+ G I P V L +++ CS+ + F +KE
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGV--IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE- 622
Query: 444 YRIEPGAEHYACVVDLLARSGLVDRA---YEFIQNMPIHPTISIWGALLGACRMHGKTKL 500
P +V + R +V +A ++++ P+++ + +L+ MH ++
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM---YMHSRSAD 679
Query: 501 GKVAAEKLFELDPEDSGNHVVLSNMLASA----GRWEEATIVRKEMKDIGIKKNV 551
+ E L E+ + ++ N + A R +A+ + EM++ GI +V
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/497 (20%), Positives = 206/497 (41%), Gaps = 43/497 (8%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLR----TVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
N L+++Y K A VL+ L ++VT+ SLI+ +G A+ M
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 102 DCVQPNDFTFPCV---FKASSSLQ--MPITGKQAHALALKGGQIYDVFVGCSAFDMYSKT 156
+P+ FT+ + F+ + ++ M I + +A ++ F+ MY
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI-----KMYGNR 432
Query: 157 GLRVDARNMFDEMP----QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITF 212
G + +FDE+ ++ TWN ++ Q+G + G FKE P TF
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 213 CAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI-- 270
++A + ++ ++ +G D+S N ++ + G SE V + +
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 271 GRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA------EPTDFMISSVLSACAEL 324
GR + N +T+CS+L A E + + + E EP ++ +++ C++
Sbjct: 553 GRCKPNELTYCSLLHAYANGKE-----IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 325 GGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTW 380
L + + +I +++V +YG+ + A V M +R ++ T+
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
N+++ ++ D + + E+ + GI P ++ +V+ A R + IF M
Sbjct: 668 NSLMYMHSRSADFGKSEEILREIL--AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH---PTISIWGALL-GACRMHG 496
+ I P Y + A + + A ++ M H P + + +++ G C+++
Sbjct: 726 RN-SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Query: 497 KTKLGKVAAEKLFELDP 513
K + K+ E L LDP
Sbjct: 785 KDE-AKLFVEDLRNLDP 800
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 156/361 (43%), Gaps = 18/361 (4%)
Query: 143 VFVGCSAFDMYSKTGLRVDA----RNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFK 198
V GC ++Y+K G A R M +E + NL T++ I+ V+ +A F+
Sbjct: 485 VTYGC-LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 199 EFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCG 258
+ + +P+ I + ++A + Q + + +R +I Y K G
Sbjct: 544 DMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 259 DIVSSEMVFSRIGRSR--RNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMIS 315
D+ S VF + R V T+ ++ LV+ + E+A + + + +
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 316 SVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR 375
++ A +G +D +IF AL+ K G +++A V EM R
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Query: 376 NI----VTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVE 431
NI +N +I G+A +GDV A L ++M G+ P T S +SACS+AG +
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMK--KEGVKPDIHTYTSFISACSKAGDMN 781
Query: 432 SGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRA---YEFIQNMPIHPTISIWGAL 488
E M E ++P + Y ++ AR+ L ++A YE ++ M I P +++ L
Sbjct: 782 RATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL 840
Query: 489 L 489
L
Sbjct: 841 L 841
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
Query: 352 LVDLYGKCGSIENAEQVFSEMPQRNIVT----WNAMIGGYAHQGDVDMALGLFEEMTLGS 407
+V YG+ G + A + F M R I + ++I YA D+D AL +M
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK--E 372
Query: 408 CGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVD 467
GI S VT ++ S+AG E+ + F+ K I++ A Y ++ ++ ++
Sbjct: 373 EGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT-LNASIYGKIIYAHCQTCNME 431
Query: 468 RAYEFIQNMP---IHPTISIWGALLGACRMHGKTKLGKVAAEKLFE--LDPEDSGNHVVL 522
RA ++ M I I+I+ ++ M K G V ++L E P + L
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP-TVVTYGCL 490
Query: 523 SNMLASAGRWEEATIVRKEMKDIGIKKNV 551
N+ G+ +A V + MK+ G+K N+
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNL 519
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 148/403 (36%), Gaps = 92/403 (22%)
Query: 239 GYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS---RRNVVTWCSMLAALVQNHEEER 295
G+ V LI+ Y K G I S + SR+ + + N+ T+ M+ V+ +
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKI-SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 296 ACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVD 354
A VF KE +P + ++++SA +G ++ K ++
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 355 LYGKCGSIENAEQVFSEMPQ----RNIVTWNAMIGGYAHQGDVDMALGLFEEMTL----- 405
Y K G + + +VF M + + T+N +I G + ++ A+ + +EMTL
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 406 ---------------GSCGIAPSYVTLV-------------SVLSACSRAGAVESGMHIF 437
G G A Y T + ++L AC ++G ++S + +
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 438 ESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP---IHPTISIWGALLGACRM 494
+ M I + Y ++D AR G V A + IQ M + P I + + + AC
Sbjct: 718 KEMS-ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC-- 774
Query: 495 HGKTKLGKVAAEKLFELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYS 554
+ AG AT +EM+ +G+K N+
Sbjct: 775 --------------------------------SKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 555 WIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAGYFPD 597
+K A+ S EK EEMK G PD
Sbjct: 803 TTLIKG-----WARASLPEK-------ALSCYEEMKAMGIKPD 833
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 168/407 (41%), Gaps = 46/407 (11%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLR----TVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
N +I+ +L + A H+L L L+ V+++++++ G G M+R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD 161
++PN + + + + ++A + ++ G + D V + D + K G
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 162 ARNMFDEMPQRNLA----TWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLN 217
A F EM R++ T+ A IS Q G ++A F E C EP+S+TF +N
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 218 ACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNV 277
+ ++H +I++G +V LID K GD+ S+ +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL---------- 479
Query: 278 VTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALA 337
HE + L +P F +S+++ + G +E +
Sbjct: 480 -------------HEMWKIGL---------QPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 338 VKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM----PQRNIVTWNAMIGGYAHQGDV 393
A ++ + + L+D Y K G ++ A+++ EM Q IVT+N ++ G+ G +
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 394 DMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
+ L M + GIAP+ T S++ +++ I++ M
Sbjct: 578 EDGEKLLNWML--AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 154/353 (43%), Gaps = 19/353 (5%)
Query: 165 MFDEMPQR----NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
+F E P+ N+A++N I Q GR +A P+ I++ +N
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 221 DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS--RRNVV 278
L +L + R G + + + +I + + +E FS + R + V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 279 TWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGL-ELGRSVHAL 336
+ +++ + + A F + ++ P ++++S ++G + E G+ H +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 337 AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGD 392
K +++ + L++ Y K G +++A +V + M Q N+VT+ +I G +GD
Sbjct: 413 FCKGLEPDSV-TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 393 VDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEH 452
+D A L EM G+ P+ T S+++ ++G +E + + E +
Sbjct: 472 LDSANELLHEM--WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVT 528
Query: 453 YACVVDLLARSGLVDRAYEFIQNM---PIHPTISIWGALLGACRMHGKTKLGK 502
Y ++D +SG +D+A E ++ M + PTI + L+ +HG + G+
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 168/407 (41%), Gaps = 46/407 (11%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLR----TVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
N +I+ +L + A H+L L L+ V+++++++ G G M+R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD 161
++PN + + + + ++A + ++ G + D V + D + K G
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 162 ARNMFDEMPQRNLA----TWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLN 217
A F EM R++ T+ A IS Q G ++A F E C EP+S+TF +N
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 218 ACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNV 277
+ ++H +I++G +V LID K GD+ S+ +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL---------- 479
Query: 278 VTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALA 337
HE + L +P F +S+++ + G +E +
Sbjct: 480 -------------HEMWKIGL---------QPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 338 VKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM----PQRNIVTWNAMIGGYAHQGDV 393
A ++ + + L+D Y K G ++ A+++ EM Q IVT+N ++ G+ G +
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 394 DMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
+ L M + GIAP+ T S++ +++ I++ M
Sbjct: 578 EDGEKLLNWML--AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 154/353 (43%), Gaps = 19/353 (5%)
Query: 165 MFDEMPQR----NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
+F E P+ N+A++N I Q GR +A P+ I++ +N
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 221 DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS--RRNVV 278
L +L + R G + + + +I + + +E FS + R + V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 279 TWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGL-ELGRSVHAL 336
+ +++ + + A F + ++ P ++++S ++G + E G+ H +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 337 AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGD 392
K +++ + L++ Y K G +++A +V + M Q N+VT+ +I G +GD
Sbjct: 413 FCKGLEPDSV-TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 393 VDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEH 452
+D A L EM G+ P+ T S+++ ++G +E + + E +
Sbjct: 472 LDSANELLHEM--WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVT 528
Query: 453 YACVVDLLARSGLVDRAYEFIQNM---PIHPTISIWGALLGACRMHGKTKLGK 502
Y ++D +SG +D+A E ++ M + PTI + L+ +HG + G+
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 145/357 (40%), Gaps = 71/357 (19%)
Query: 136 KGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQ----RNLATWNAYISNAVQDGRSL 191
+GG + DV+ D + K GL AR F+EM + N+ T+ A I ++ +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 192 DAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLI 251
A F+ L PN +T+ A ++ G+ + V
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALID---------------------GHCKAGQVEKACQ 609
Query: 252 DFYGKCG--DIVSSEMVFSRI--GRSRRNVVTWCSMLAALVQNHE-EERACLVFLQARKE 306
F CG D+ +M F + R NVVT+ ++L ++H EE L+ + +
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 307 AEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAE 366
EP + +++ ++G L+ + V + ++ S+L+D Y K + A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 367 QVFSEM------P---------------------------------QRNIVTWNAMIGGY 387
+V S+M P Q N+VT+ AMI G+
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 388 AHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIY 444
G ++ L L E M GS G+AP+YVT ++ C + GA++ ++ E MK+ +
Sbjct: 790 GMIGKIETCLELLERM--GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 110/522 (21%), Positives = 204/522 (39%), Gaps = 89/522 (17%)
Query: 55 LDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCV 114
+D LN + + + L VVT+++L+ GC+N + M + P+ F +
Sbjct: 322 MDFLNRMR---ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 115 FKA-----SSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD----ARNM 165
A S + K + G +Y++ +G D K L D A
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGD---KDSLNCDLLDLAEKA 435
Query: 166 FDEM-------PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNA 218
+ EM + N++++ + +A G+ A +E + P++ T+ LN
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSA---GKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 219 CADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR--SRRN 276
+ + L L + R G DV ++D + K G I + F+ + N
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Query: 277 VVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHAL 336
VVT+ +++ A +L+A+K + + + + C
Sbjct: 553 VVTYTALIHA-------------YLKAKKVSYANELFETMLSEGCL-------------- 585
Query: 337 AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMA 396
NI SAL+D + K G +E A Q+F M G DVDM
Sbjct: 586 -------PNIVTYSALIDGHCKAGQVEKACQIFERM------------CGSKDVPDVDMY 626
Query: 397 LGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV 456
+++ + P+ VT ++L ++ VE + ++M + EP Y +
Sbjct: 627 FKQYDDNSE-----RPNVVTYGALLDGFCKSHRVEEARKLLDAMS-MEGCEPNQIVYDAL 680
Query: 457 VDLLARSGLVDRAYEFIQNMPIH---PTISIWGALLGACRMHGKTKLGKVAAEKLFE-LD 512
+D L + G +D A E M H T+ + +L+ + K K +A++ L + L+
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR---YFKVKRQDLASKVLSKMLE 737
Query: 513 PEDSGNHVVLSNM---LASAGRWEEATIVRKEMKDIGIKKNV 551
+ N V+ + M L G+ +EA + + M++ G + NV
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 115/526 (21%), Positives = 211/526 (40%), Gaps = 85/526 (16%)
Query: 75 TWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALA 134
+ +L + ++ G A+ F M+R V P + + + L K+
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 135 LKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLA----TWNAYISNAVQDGRS 190
+ G VF D K G AR +F+EM R L T+N+ I + GR
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGL 250
D V F+E + EP+ IT+ A +N L +G + YRE NGL
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF--------YRE--MKGNGL 363
Query: 251 IDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEA-EP 309
+ NVV++ +++ A + ++A ++ R+ P
Sbjct: 364 -----------------------KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
Query: 310 TDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVF 369
++ +S++ A ++G L + ++ V+ N+ +AL+D ++ AE++F
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 370 SEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMT--------------------- 404
+M N+ ++NA+I G+ ++D AL L E+
Sbjct: 461 GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSL 520
Query: 405 ------------LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEH 452
+ CGI + + +++ A ++G G+H+ + MKE+ IE
Sbjct: 521 EKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL-DIEVTVVT 579
Query: 453 YACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKV-AAEKLFE- 510
+ ++D L ++ LV +A ++ + + A+ A + G K +V AA LFE
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA-MIDGLCKDNQVEAATTLFEQ 638
Query: 511 -----LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNV 551
L P D + L + G EA +R +M +IG+K ++
Sbjct: 639 MVQKGLVP-DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 21/283 (7%)
Query: 282 SMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
S+L +V + + V R P + ++ S +LG LE + +
Sbjct: 163 SVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR 222
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEM----PQRNIVTWNAMIGGYAHQGDVDMAL 397
V + L+ + K G ++ ++ F +M + + T+N MI +GDV+ A
Sbjct: 223 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 398 GLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVV 457
GLFEEM G+ P VT S++ + G ++ + FE MK++ EP Y ++
Sbjct: 283 GLFEEMKFR--GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC-CEPDVITYNALI 339
Query: 458 DLLARSGLVDRAYEFIQNMP---IHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPE 514
+ + G + EF + M + P + + L+ A K G + F +D
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF-----CKEGMMQQAIKFYVDMR 394
Query: 515 DSG---NHVVLSNML---ASAGRWEEATIVRKEMKDIGIKKNV 551
G N ++++ G +A + EM +G++ NV
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 176/426 (41%), Gaps = 24/426 (5%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSL-QMPITGKQAH 131
VT+ S+I G GR + F M+ C +P+ T+ + ++PI G + +
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI-GLEFY 355
Query: 132 ALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLA----TWNAYISNAVQD 187
G +V + D + K G+ A + +M + L T+ + I +
Sbjct: 356 REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 415
Query: 188 GRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVA 247
G DA E L V E N +T+ A ++ D + +L + +G +++
Sbjct: 416 GNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASY 475
Query: 248 NGLIDFYGKCGDIVSS-EMVFSRIGRS-RRNVVTWCSMLAALVQNHEEERACLVFLQARK 305
N LI + K ++ + E++ GR + +++ + + + L + E A +V + ++
Sbjct: 476 NALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535
Query: 306 EAEPTDFMI-SSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS--I 362
+ +I ++++ A + G G +H L +D + V + V + G C + +
Sbjct: 536 CGIKANSLIYTTLMDAYFKSGNPTEG--LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 363 ENAEQVFSEMP-----QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTL 417
A F+ + Q N + AMI G V+ A LFE+M G+ P
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV--QKGLVPDRTAY 651
Query: 418 VSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM- 476
S++ + G V + + + M EI ++ Y +V L+ + +A F++ M
Sbjct: 652 TSLMDGNFKQGNVLEALALRDKMAEI-GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI 710
Query: 477 --PIHP 480
IHP
Sbjct: 711 GEGIHP 716
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/376 (18%), Positives = 154/376 (40%), Gaps = 14/376 (3%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA 132
VV++++L+ G A+ +V+MRR + PN++T+ + A+ + +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 133 LALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQR----NLATWNAYISNAVQDG 188
L+ G ++V + D +A +F +M NLA++NA I V+
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
A+ E +P+ + + F+ + + + + G + + +
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGR--SRRNVVTWCSMLAALVQNHEEERACLVFLQARKE 306
L+D Y K G+ + + VVT+C ++ L +N +A F + +
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606
Query: 307 --AEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIEN 364
+ + ++++ + +E ++ V+ + + ++L+D K G++
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Query: 365 AEQVFSEMPQ----RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSV 420
A + +M + +++ + +++ G +H + A EEM +G GI P V +SV
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM-IGE-GIHPDEVLCISV 724
Query: 421 LSACSRAGAVESGMHI 436
L G ++ + +
Sbjct: 725 LKKHYELGCIDEAVEL 740
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 168/396 (42%), Gaps = 58/396 (14%)
Query: 111 FPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP 170
F C F+ S L + I GK LK G D S + + + DA ++ D+M
Sbjct: 130 FCCCFQVS--LALSILGKM-----LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 171 Q----RNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLH 226
+ ++ +NA I + + R DA FKE PN +T+ A +N +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 227 LGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR--RNVVTWCSML 284
+L + +I+ +V + L+D + K G ++ ++ +F + R ++VT+ S++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 285 AALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDE 344
L + + A +F D M+S K C+
Sbjct: 303 NGLCLHDRIDEANQMF----------DLMVS-----------------------KGCL-A 328
Query: 345 NIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLF 400
++ + L++ + K +E+ ++F EM QR N VT+N +I G+ GDVD A F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
+M GI+P T +L G +E + IFE M++ ++ Y V+ +
Sbjct: 389 SQMDF--FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK-REMDLDIVTYTTVIRGM 445
Query: 461 ARSGLVDRAYEFIQNMP---IHPTISIWGALL-GAC 492
++G V+ A+ ++ + P I + ++ G C
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 46/292 (15%)
Query: 161 DARNMFDEMPQR----NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFL 216
DA + +M ++ N+ T++A + V++G+ L+A F+E + + +P+ +T+ + +
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 217 NACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS--R 274
N + Q+ ++ G DV N LI+ + K + +F + +
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 275 RNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVH 334
N VT+ +++ Q + ++A F Q D ++L LGGL
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL-----LGGL------- 410
Query: 335 ALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQ 390
C + G +E A +F +M +R +IVT+ +I G
Sbjct: 411 ------CDN----------------GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 391 GDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKE 442
G V+ A LF ++L G+ P VT +++S G + ++ MK+
Sbjct: 449 GKVEEAWSLFCSLSLK--GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 172/392 (43%), Gaps = 29/392 (7%)
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLH 232
+L ++N I+ + R + A+ + + EP+ +T + +N + L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 233 AFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAAL-VQ 289
+ + G+R DV + N +ID K G + + +F R+ R R + VT+ S++A L
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 290 NHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVG 349
+ A L+ ++ P ++V+ + G ++ + CVD ++F
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 350 SALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
++L++ G ++ A+Q+ M + ++VT+N +I G+ VD LF EM
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM-- 340
Query: 406 GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGL 465
G+ +T +++ +AG ++ IF M P Y+ ++ L +
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS----RPNIRTYSILLYGLCMNWR 396
Query: 466 VDRAYEFIQNM---PIHPTISIWGALLGACRMHGKTKLGKVA-AEKLFE------LDPED 515
V++A +NM I I+ + ++ HG K+G V A LF L P D
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVI-----HGMCKIGNVEDAWDLFRSLSCKGLKP-D 450
Query: 516 SGNHVVLSNMLASAGRWEEATIVRKEMKDIGI 547
++ + + +W+++ ++ ++M++ G+
Sbjct: 451 VVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 135/316 (42%), Gaps = 24/316 (7%)
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNL----ATWNAYISNAVQDGRSLDAVGAF 197
DV + + D K GL DA +FD M + + T+N+ ++ GR DA
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 198 KEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLID---FY 254
++ + PN ITF A ++ +L+ + R DV N LI+ +
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 255 GKCGDIVSSEMVFSRIGRS-RRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFM 313
G+ + + +M+ + + +VVT+ +++ ++ + +F + + D +
Sbjct: 293 GRVDE--AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 314 ISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS--IENAEQVFSE 371
+ + G + GR A + + +D + + + LYG C + +E A +F
Sbjct: 351 TYNTIIQ----GYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 372 MPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSC-GIAPSYVTLVSVLSACSR 426
M + +I T+N +I G G+V+ A LF + SC G+ P V+ +++S R
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL---SCKGLKPDVVSYTTMISGFCR 463
Query: 427 AGAVESGMHIFESMKE 442
+ ++ M+E
Sbjct: 464 KRQWDKSDLLYRKMQE 479
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 144/371 (38%), Gaps = 84/371 (22%)
Query: 46 NHLINMYSKLDLLNSAQHVLSLTHLRTV----VTWTSLIAGCVNNGRFVAALLHFVNMRR 101
N +I+ K+ L+N A + V VT+ SL+AG +GR+ A +M
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD 161
+ PN TF V DVFV K G +
Sbjct: 238 RDIVPNVITFTAVI--------------------------DVFV---------KEGKFSE 262
Query: 162 ARNMFDEMPQR----NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAFL 216
A +++EM +R ++ T+N+ I+ GR +D + + G P+ +T+ +
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR-VDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 217 NACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRN 276
N + G +L + + G D N +I Y + G +++ +FSR+ SR N
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD-SRPN 380
Query: 277 VVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHAL 336
+ T+ +L L N E+A ++F +K D +++ +H +
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV--------------IHGM 426
Query: 337 AVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP----QRNIVTWNAMIGGYAHQGD 392
K G++E+A +F + + ++V++ MI G+ +
Sbjct: 427 C--------------------KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 393 VDMALGLFEEM 403
D + L+ +M
Sbjct: 467 WDKSDLLYRKM 477
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 9/241 (3%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA 132
V+T+T++I V G+F A+ + M R CV P+ FT+ + KQ
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 133 LALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLA----TWNAYISNAVQDG 188
L + G + DV + + + K+ + +F EM QR L T+N I Q G
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
R A F + PN T+ L + L + +S D++ N
Sbjct: 364 RPDAAQEIFSR---MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAALVQNHEEERACLVFLQARKE 306
+I K G++ + +F + + +VV++ +M++ + + +++ L++ + +++
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 307 A 307
Sbjct: 481 G 481
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 178/475 (37%), Gaps = 97/475 (20%)
Query: 58 LNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFK- 116
L ++ + H ++T +L+ G +G+ A+L M QPN T+ V
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 117 ----ASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQR 172
++L M + K Y + + D K G +A N+F+EM +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIII-----DGLCKHGSLDNAFNLFNEMEMK 292
Query: 173 ----NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLG 228
N+ T+N I GR D ++ + PN +TF +++ L
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 229 RQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALV 288
+LH +I G D LID + K
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCK-------------------------------- 380
Query: 289 QNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFV 348
+NH + K + D M+S K C D NI
Sbjct: 381 ENHLD-----------KANQMVDLMVS-----------------------KGC-DPNIRT 405
Query: 349 GSALVDLYGKCGSIENAEQVFSEMPQRNI----VTWNAMIGGYAHQGDVDMALGLFEEMT 404
+ L++ Y K I++ ++F +M R + VT+N +I G+ G +++A LF+EM
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 405 LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSG 464
S + P+ VT +L G E + IFE + E ++E Y ++ + +
Sbjct: 466 --SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNAS 522
Query: 465 LVDRAYEFIQNMP---IHPTISIWGALLGACRMHGKTKLGKVA-AEKLFELDPED 515
VD A++ ++P + P + + ++G G K G ++ AE LF ED
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIG-----GLCKKGPLSEAELLFRKMEED 572
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 128/312 (41%), Gaps = 49/312 (15%)
Query: 193 AVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLID 252
A A + + + EPN+ITF +N + +L ++ G++ D+ N L++
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 253 FYGKCGDIVSSEMVFSRIGR--SRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPT 310
G + ++ ++ + N VT+ +L + ++ + L RK E
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ---TALAMELLRKMEE-- 256
Query: 311 DFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFS 370
R++ AVK S ++D K GS++NA +F+
Sbjct: 257 --------------------RNIKLDAVKY---------SIIIDGLCKHGSLDNAFNLFN 287
Query: 371 EMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
EM + NI+T+N +IGG+ + G D L +M I P+ VT ++ + +
Sbjct: 288 EMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK--INPNVVTFSVLIDSFVK 345
Query: 427 AGAVESGMHIFESMKEIYR-IEPGAEHYACVVDLLARSGLVDRAYEFIQNM---PIHPTI 482
G + + + M I+R I P Y ++D + +D+A + + M P I
Sbjct: 346 EGKLREAEELHKEM--IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 483 SIWGALL-GACR 493
+ L+ G C+
Sbjct: 404 RTFNILINGYCK 415
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 128/305 (41%), Gaps = 37/305 (12%)
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
PT S + SA A+ +L ++ + N++ S +++ + +C + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA--- 142
Query: 369 FSEMP-------QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
FS M + N +T++ +I G +G V AL L + M G P +T+ +++
Sbjct: 143 FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV--EMGHKPDLITINTLV 200
Query: 422 SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP---I 478
+ +G M + + M E Y +P A Y V++++ +SG A E ++ M I
Sbjct: 201 NGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 479 HPTISIWGALLGACRMHGKTKLGKVAAEKLF-ELDPEDSGNHVVLSNML----ASAGRWE 533
+ ++ HG A LF E++ + +++ N+L +AGRW+
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLD----NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 534 EATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKAG 593
+ + ++M IK+ + + + + F + E +L +EM G
Sbjct: 316 DGAKLLRDM----IKRKINPNVVTFSVLIDSFVKEGKLREAE--------ELHKEMIHRG 363
Query: 594 YFPDT 598
PDT
Sbjct: 364 IAPDT 368
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 145/375 (38%), Gaps = 70/375 (18%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA 132
++T+ LI G N GR+ +M + + PN TF +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI----------------- 340
Query: 133 LALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLA----TWNAYISNAVQDG 188
D + K G +A + EM R +A T+ + I ++
Sbjct: 341 ------------------DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 189 RSLDAVGAFKEFLCVHG-EPNSITFCAFLNA-C-ADRL--GLHLGRQLHAFIIRSGYRED 243
LD + + G +PN TF +N C A+R+ GL L R++ G D
Sbjct: 383 H-LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL----RGVVAD 437
Query: 244 VSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR---NVVTWCSMLAALVQNHEEERACLVF 300
N LI + + G + ++ +F + SR+ N+VT+ +L L N E E+A +F
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEM-VSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 301 LQARKEAEPTDFMISSVL-----SACAELGGLELGRSVHALAVKACVDE-NIFVGSALVD 354
+ K D I +++ +A +L S+ VK V NI +G
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC-- 554
Query: 355 LYGKCGSIENAEQVFSEMPQRNIV----TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGI 410
K G + AE +F +M + T+N +I + GD ++ L EE L CG
Sbjct: 555 ---KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE--LKRCGF 609
Query: 411 APSYVTLVSVLSACS 425
+ T+ V+ S
Sbjct: 610 SVDASTIKMVIDMLS 624
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 10/276 (3%)
Query: 164 NMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRL 223
NM ++ N+ T+NA I ++G+ ++A +E + +P++IT+ +N
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 224 GLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR----NVVT 279
L +Q+ F++ ++ N LI+ + KC + +F + S+R N VT
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM--SQRGLVGNTVT 435
Query: 280 WCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSV-LSACAELGGLELGRSVHALAV 338
+ +++ Q + + A +VF Q PTD M S+ L G L+ +
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 339 KACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR-NIVTWNAMIGGYAHQGDVDMAL 397
K+ ++ NIF+ + +++ K G + A +F + + ++VT+N MI G + + A
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 398 GLFEEMTL-GSCGIAPSYVTLVSV-LSACSRAGAVE 431
LF +M G+ + +Y TL+ L C RA + E
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/515 (20%), Positives = 207/515 (40%), Gaps = 73/515 (14%)
Query: 48 LINMYSKLDLLNSAQHVLS----LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC 103
IN + + L+ A VL+ L + +VT +SL+ G ++ R A+ M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 104 VQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIY-----DVFVGCSAFDMYSKTGL 158
+P+ FTF + + + K + A+AL + D+ + + K G
Sbjct: 184 YKPDTFTFTTLIHG-----LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 159 RVDARNMFDEMP----QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCA 214
A N+ ++M + N+ +N I + + AV F E PN +T+ +
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 215 FLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR 274
+N + +L + ++ +V N LID + K G +V +E +
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL-------- 350
Query: 275 RNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVH 334
HEE ++ +P + +++ L+ + +
Sbjct: 351 ----------------HEE--------MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 335 ALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQ 390
V NI + L++ + KC +E+ ++F EM QR N VT+ +I G+
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 391 GDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGA 450
GD D A +F++M S + +T +L G +++ + IF+ +++ +E
Sbjct: 447 GDCDSAQMVFKQMV--SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK-SEMELNI 503
Query: 451 EHYACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALL-GACRMHGKTKLGKVAAEKLF 509
Y +++ + ++G V A++ ++ I P + + ++ G C +K A+ LF
Sbjct: 504 FIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC-----SKRLLQEADDLF 558
Query: 510 ELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKD 544
ED L ++G + T++R ++D
Sbjct: 559 RKMKEDG--------TLPNSGTYN--TLIRANLRD 583
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 172/403 (42%), Gaps = 30/403 (7%)
Query: 161 DARNMFDEM----PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSI-TFCAF 215
DA ++F +M P ++ +N +S AV + V + E + G + + T+ F
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLS-AVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 216 LNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFY---GKCGDIVSSEMVFSRIGR 272
+N R L L + A +++ GY D+ + L++ Y + D V+ +G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 273 SRRNVVTWCSMLAAL-VQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGR 331
+ + T+ +++ L + N E LV ++ +P +V++ + G ++L
Sbjct: 185 -KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 332 SVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGY 387
++ A + N+ + + ++D K +E A +F+EM + N+VT+N++I
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 388 AHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIE 447
+ G A L M I P+ VT +++ A + G + + E M + I+
Sbjct: 304 CNYGRWSDASRLLSNMLEKK--INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ-RSID 360
Query: 448 PGAEHYACVVDLLARSGLVDRA---YEFIQNMPIHPTISIWGALL-GACRMHGKTKLGKV 503
P Y +++ +D A ++F+ + P I + L+ G C K K +
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC----KCKRVED 416
Query: 504 AAEKLFELDPED-SGNHVVLSNMLA---SAGRWEEATIVRKEM 542
E E+ GN V + ++ AG + A +V K+M
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 188/438 (42%), Gaps = 28/438 (6%)
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLH 232
++ T N+ ++ R +AV + + + +P+++TF ++ L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 233 AFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI--GRSRRNVVTWCSMLAALVQN 290
++ G + D+ +I+ K G+ + + +++ G+ +VV + +++ +L +
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 291 HEEERACLVFLQA-RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVG 349
+ A +F + K P F SS++S G + + ++ ++ N+
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 350 SALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
++L+D + K G + AE++F EM QR NIVT+N++I G+ +D A +F M
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 406 GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGL 465
C P VT ++++ +A V GM +F M + Y ++ ++
Sbjct: 374 KDC--LPDVVTYNTLINGFCKAKKVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASD 430
Query: 466 VDRAYEFIQNM---PIHPTISIWGALLGACRMHGKTKLGKVAAEKL--FELDPEDSGNHV 520
D A + M +HP I + LL +GK + V E L +++P D +
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP-DIYTYN 489
Query: 521 VLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQA 580
++S + AG+ E+ + + G+K +V IA + F K E +
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV----IAYNTMISGFCKKGLKEEAYT---- 541
Query: 581 MLAKLREEMKKAGYFPDT 598
L +MK+ G PD+
Sbjct: 542 ----LFIKMKEDGPLPDS 555
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 148/342 (43%), Gaps = 19/342 (5%)
Query: 142 DVFVGCSAFDMYSKTGLRVDARNMFDEMPQR----NLATWNAYISNAVQDGRSLDAVGAF 197
DVF S G DA + +M +R N+ T+N+ I ++G+ ++A F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 198 KEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKC 257
E + +PN +T+ + +N L +Q+ ++ DV N LI+ + K
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 258 GDIVSSEMVFSRIGRSRR----NVVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDF 312
+V +F + SRR N VT+ +++ Q + + A +VF Q + P
Sbjct: 394 KKVVDGMELFRDM--SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 313 MISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEM 372
+++L + G LE V K+ ++ +I+ + + + K G +E+ +F +
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 373 PQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
+ +++ +N MI G+ +G + A LF +M G P T +++ A R G
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK--EDGPLPDSGTYNTLIRAHLRDG 569
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAY 470
+ + + M+ R A Y V D+L G +D+ +
Sbjct: 570 DKAASAELIKEMRSC-RFAGDASTYGLVTDML-HDGRLDKGF 609
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 111/220 (50%), Gaps = 14/220 (6%)
Query: 345 NIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI----VTWNAMIGGYAHQGDVDMALGLF 400
++F +AL++ + K I++A +V M ++ VT+N MIG +G +D+AL +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 401 EEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLL 460
++ +C P+ +T ++ A G V+ + + + M ++P Y ++ +
Sbjct: 217 NQLLSDNC--QPTVITYTILIEATMLEGGVDEALKLMDEMLS-RGLKPDMFTYNTIIRGM 273
Query: 461 ARSGLVDRAYEFIQNMPI---HPTISIWGALLGACRMHGKTKLGKVAAEKLF--ELDPED 515
+ G+VDRA+E ++N+ + P + + LL A GK + G+ K+F + DP +
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP-N 332
Query: 516 SGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSW 555
+ +L L G+ EEA + K MK+ G+ + YS+
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD-AYSY 371
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 182/426 (42%), Gaps = 21/426 (4%)
Query: 86 NGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFV 145
+G ++ +L M R P+ + K +L+ + + K GQ DVF
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-DVFA 160
Query: 146 GCSAFDMYSKTGLRVDARNMFDEMPQRNLA----TWNAYISNAVQDGRSLDAVGAFKEFL 201
+ + + K DA + D M ++ + T+N I + G+ A+ + L
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIV 261
+ +P IT+ + A G+ +L ++ G + D+ N +I K G +
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 262 SS-EMVFS-RIGRSRRNVVTWCSMLAALV-QNHEEERACLVFLQARKEAEPTDFMISSVL 318
+ EMV + + +V+++ +L AL+ Q EE L+ ++ +P S ++
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 319 SACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG----SIENAEQVFSEMPQ 374
+ G +E ++ L + + + + L+ + + G +IE E + S+
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 375 RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGM 434
+IV +N ++ G D AL +F + LG G +P+ + ++ SA +G +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGK--LGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 435 H-IFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM---PIHPTISIWG-ALL 489
H I E M I+P Y ++ L R G+VD A+E + +M HP++ + LL
Sbjct: 459 HMILEMMSN--GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 490 GACRMH 495
G C+ H
Sbjct: 517 GFCKAH 522
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 181/458 (39%), Gaps = 65/458 (14%)
Query: 78 SLIAGCVNNGRFVAALLHFVNMRRDCVQPND----FTFPCVFKASSSLQMPITGKQAHAL 133
S++ G V RF + + + M + P+ F C FK + + +L
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 134 ALKGG-QIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQR----NLATWNAYISNAVQDG 188
+K IY +++ D+ + +A MF+ M + NL T++A I + G
Sbjct: 229 GIKPNVYIYTIYI----LDLCRDNKME-EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
A G +KE L PN + F ++ L R L +++ G ++ V N
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAE 308
LI + K G+ ML A+ E E L
Sbjct: 344 CLIHGHCKSGN-----------------------MLEAVGLLSEMESLNL---------S 371
Query: 309 PTDFMISSVLSA-CAELGGLELGRSVHALAVKACVDENIFVGSA----LVDLYGKCGSIE 363
P F + +++ C E E R + +E IF SA L+ Y K ++E
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMK-----NERIFPSSATYNSLIHGYCKEYNME 426
Query: 364 NAEQVFSEMP----QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVS 419
A + SEM + NI+T++ +I GY + D+ A+GL+ EMT+ GI P VT +
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK--GIVPDVVTYTA 484
Query: 420 VLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH 479
++ A + ++ + ++ M E I P +AC+VD + G + A +F Q +
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEA-GIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN--N 541
Query: 480 PTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSG 517
S W + C + G + G + F D G
Sbjct: 542 QQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 158/398 (39%), Gaps = 31/398 (7%)
Query: 43 FLCNHLINMYSKLDLLNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRD 102
F C +YSK + L + SL V +T I + + A F M++
Sbjct: 206 FQCCFKQGLYSKKEKL--LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKH 263
Query: 103 CVQPNDFTFPCVFKASSSLQMPITG--KQAHAL---ALKGGQIYDVFVGCSAFDMYSKTG 157
V PN +T+ + TG +QA+ L L + +V V + D + K
Sbjct: 264 GVLPNLYTYSAMIDGYCK-----TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR 318
Query: 158 LRVDARNMFDEMPQ----RNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFC 213
V AR++F M + NL +N I + G L+AVG E ++ P+ T+
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT 378
Query: 214 AFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDI-----VSSEMVFS 268
+N + +L + + N LI Y K ++ + SEM S
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438
Query: 269 RIGRSRRNVVTWCSMLAALVQNHEEERAC-LVFLQARKEAEPTDFMISSVLSACAELGGL 327
+ N++T+ +++ + + A L F K P ++++ A + +
Sbjct: 439 GV---EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 328 ELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAM 383
+ +++ ++A + N + LVD + K G + A + E Q+ N V + +
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 384 IGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
I G G + A F +M SCGI P + VS+L
Sbjct: 556 IEGLCQNGYILRASRFFSDMR--SCGITPDICSYVSML 591
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 173/392 (44%), Gaps = 24/392 (6%)
Query: 171 QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQ 230
Q + T+N I + R+ +AV + +P+ +T+ +N R + L
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 231 LHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAALV 288
L + + V + N +ID ++ + +F+ + R NVVT+ S++ L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 289 QNHEEERAC-LVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIF 347
A L+ ++ P S+++ A + G L ++ +K +D +IF
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 348 VGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEM 403
S+L++ + ++ A+ +F M + N+VT+N +I G+ VD + LF EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
+ G+ + VT +++ +A ++ +F+ M + P Y+ ++D L +
Sbjct: 423 S--QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLPDIMTYSILLDGLCNN 479
Query: 464 GLVDRA---YEFIQNMPIHPTISIWGALL-GACRMHGKTKLG--KVAAEKLFELDPEDSG 517
G V+ A +E++Q + P I + ++ G C+ GK + G + L + P
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK-AGKVEDGWDLFCSLSLKGVKP---- 534
Query: 518 NHVVLSNMLAS---AGRWEEATIVRKEMKDIG 546
N V + M++ G EEA + +EMK+ G
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 196/493 (39%), Gaps = 42/493 (8%)
Query: 11 SLLESAVSTRSPL-LGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA----QHVL 65
S+L + RS L L AV A++++ P L N L+N + + ++ A ++
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL-NSLLNGFCHGNRISDAVSLVGQMV 178
Query: 66 SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVF-----KASSS 120
+ + T+ +LI G + R A+ M QP+ T+ V +
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 121 LQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQR----NLAT 176
L + + K G IY+ + A Y DA N+F EM + N+ T
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTII--DALCNYKNVN---DALNLFTEMDNKGIRPNVVT 293
Query: 177 WNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFII 236
+N+ I GR DA + + PN +TF A ++A L +L+ +I
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR--RNVVTWCSMLAALVQNHEEE 294
+ D+ + LI+ + + ++ +F + NVVT+ +++ + +
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 295 RACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRS------VHALAVKACVDENIFV 348
+F + + ++ + ++ + G R V V V +I
Sbjct: 414 EGMELFREMSQRG-----LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 349 GSALVDLYGKCGSIENAEQVFSEMPQR-----NIVTWNAMIGGYAHQGDVDMALGLFEEM 403
S L+D G +E A VF E QR +I T+N MI G G V+ LF +
Sbjct: 469 YSILLDGLCNNGKVETALVVF-EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
+L G+ P+ VT +++S R G E +F MKE + P + Y ++ R
Sbjct: 528 SLK--GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRD 584
Query: 464 GLVDRAYEFIQNM 476
G + E I+ M
Sbjct: 585 GDKAASAELIREM 597
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 19/255 (7%)
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQV 368
P+ S +LSA A++ +L S+ + N++ S L++ + + + A V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 369 FSEMP----QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSAC 424
++M + +IVT N+++ G+ H + A+ L +M G P T +++
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV--EMGYQPDSFTFNTLIHGL 196
Query: 425 SRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM---PIHPT 481
R + + + M + +P Y VV+ L + G +D A ++ M I P
Sbjct: 197 FRHNRASEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 482 ISIWGALLGACRMHGKTKLGKVAAEKLF-ELDPEDSGNHVVLSNM----LASAGRWEEAT 536
+ I+ ++ A + A LF E+D + +VV N L + GRW +A+
Sbjct: 256 VVIYNTIIDALCNYKNVN----DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 537 IVRKEMKDIGIKKNV 551
+ +M + I NV
Sbjct: 312 RLLSDMIERKINPNV 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 374 QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG 433
Q ++VT+ ++ G +GD+D+AL L ++M G I P V +++ A V
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK--IEPGVVIYNTIIDALCNYKNVNDA 275
Query: 434 MHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM---PIHPTISIWGALLG 490
+++F M I P Y ++ L G A + +M I+P + + AL+
Sbjct: 276 LNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 491 ACRMHGKTKLGKVAAEKLFE------LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKD 544
A GK V AEKL++ +DP D + L N R +EA K M +
Sbjct: 335 AFVKEGKL----VEAEKLYDEMIKRSIDP-DIFTYSSLINGFCMHDRLDEA----KHMFE 385
Query: 545 IGIKKN 550
+ I K+
Sbjct: 386 LMISKD 391
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 209/520 (40%), Gaps = 60/520 (11%)
Query: 46 NHLINMYSKLDLLNSA-QHVLSLTHLR---TVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
N LIN K D ++ A + + + ++ TVVT+ +L+AG NG+ A+ F M +
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD 161
PN TF +F + + G + DVF + K G +
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 162 ARNMFDEMPQ---RNLATWNAYISNAVQDGRSLDAVGAFKEFL--CVHGEPNSITFCAFL 216
A F +M + + T + V+ DA FL C +P ++ + +
Sbjct: 662 AMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCAD-QPANLFWEDLI 720
Query: 217 NACADRLGLHLGRQLHAFIIRSGY-REDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS-- 273
+ G+ ++ +G R+ S+ +I + K ++ + +F + +
Sbjct: 721 GSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780
Query: 274 -RRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRS 332
+ + T+ ++ L++ E A VFLQ +
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS--------------------------- 813
Query: 333 VHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMP----QRNIVTWNAMIGGYA 388
C+ ++ + L+D YGK G I+ +++ EM + N +T N +I G
Sbjct: 814 ------TGCI-PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 389 HQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEP 448
G+VD AL L+ ++ + +P+ T ++ S++G + +FE M + Y P
Sbjct: 867 KAGNVDDALDLYYDL-MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD-YGCRP 924
Query: 449 GAEHYACVVDLLARSGLVDRAYEFIQNM---PIHPTISIWGALLGACRMHGKTKLGKVAA 505
Y +++ ++G D A + M + P + + L+ M G+ G
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 506 EKLFE--LDPEDSGNHVVLSNMLASAGRWEEATIVRKEMK 543
++L E L+P+ ++++ N L + R EEA ++ EMK
Sbjct: 985 KELKESGLNPDVVCYNLII-NGLGKSHRLEEALVLFNEMK 1023
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 141/330 (42%), Gaps = 28/330 (8%)
Query: 163 RNMFDEMPQRNLATWNAYISNAVQDGRSLD-AVGAFKEFLCVHGEPNSITFCAFLNACAD 221
+ M DE ++ T+ I +A+ R LD A F++ +P+ +T+ L+ +D
Sbjct: 282 KRMDDEGCGPDVVTYTVLI-DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 222 RLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRR-----N 276
L +Q + + + G+ DV L+D K G+ + F + R N
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA---FDTLDVMRDQGILPN 397
Query: 277 VVTWCSMLAALVQNHEEERACLVFLQARK-EAEPTDFMISSVLSACAELGGLELGRSVHA 335
+ T+ +++ L++ H + A +F +PT + + + G SV A
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD-----SVSA 452
Query: 336 LAV-----KACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNIV----TWNAMIGG 386
L + NI +A + K G A+Q+F + +V T+N M+
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 387 YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRI 446
Y+ G++D A+ L EM C P + + S+++ +A V+ +F MKE+ ++
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGC--EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM-KL 569
Query: 447 EPGAEHYACVVDLLARSGLVDRAYEFIQNM 476
+P Y ++ L ++G + A E + M
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 152/382 (39%), Gaps = 55/382 (14%)
Query: 69 HLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPC-------VFKASSSL 121
H+ VVT+T L+ G F A MR + PN T+ V + +L
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 122 QMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQR----NLATW 177
++ G Y VF+ D Y K+G V A F++M + N+
Sbjct: 419 EL--FGNMESLGVKPTAYTYIVFI-----DYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 178 NAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLG-LHLGRQLHAFII 236
NA + + + GR +A F + P+S+T+ + C ++G + +L + ++
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK-CYSKVGEIDEAIKLLSEMM 530
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIG--RSRRNVVTWCSMLAALVQNHEEE 294
+G DV V N LI+ K + + +F R+ + + VVT+ ++LA L +N + +
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 295 RACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVD 354
A +F ++ P + + + L C C ++ + + ++
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDC------------------LCKNDEVTLALKMLF 632
Query: 355 LYGKCGSIENAEQVFSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSY 414
G + ++ T+N +I G G V A+ F +M + P +
Sbjct: 633 KMMDMGCVP------------DVFTYNTIIFGLVKNGQVKEAMCFFHQM---KKLVYPDF 677
Query: 415 VTLVSVLSACSRAGAVESGMHI 436
VTL ++L +A +E I
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKI 699
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 130/296 (43%), Gaps = 29/296 (9%)
Query: 138 GQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP----QRNLATWNAYISNAVQDGRSLDA 193
G I DV D Y K+G + ++ EM + N T N IS V+ G DA
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 194 VGAFKEFLCVHG-EPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLID 252
+ + + + P + T+ ++ + L+ +QL ++ G R + ++ N LI+
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 253 FYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPT 310
+GK G+ ++ +F R+ + R ++ T+ ++ L + F + ++
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 311 DFMISSVLSACAELGGLELGRS---------VHALAVKACVDENIFVGSALVDLYGKCGS 361
D + C L LG+S + + + +++ ++L+ G G
Sbjct: 995 DVV-------CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 362 IENAEQVFSEMP----QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPS 413
+E A ++++E+ + N+ T+NA+I GY+ G + A +++ M G G +P+
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG--GFSPN 1101
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/492 (20%), Positives = 204/492 (41%), Gaps = 68/492 (13%)
Query: 46 NHLINMYSKLDLLNSAQHVL----SLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRR 101
N LIN + + ++ A +L L + ++VT +SL+ G + R A+ M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 102 DCVQPNDFTFPCVFKASSSLQMPITGKQAHALAL------KGGQIYDVFVGCSAFDMYSK 155
+P+ TF + + + K + A+AL +G Q V G + +
Sbjct: 184 MGYRPDTITFTTLIHG-----LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 156 TGLRVDARNMFDEMP----QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSIT 211
+ + A N+ ++M + N+ ++ I + + DA+ F E PN IT
Sbjct: 239 GDIDL-AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297
Query: 212 FCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIG 271
+ + ++ + +L + +I +V N LID + K G +V +E ++ +
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM- 356
Query: 272 RSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGR 331
++ +P F SS+++ L+ +
Sbjct: 357 -------------------------------IKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 332 SVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGY 387
+ L + N+ + L++ + K I+ ++F EM QR N VT+ +I G+
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 388 AHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIE 447
D D A +F++M S G+ P+ +T ++L + G +E M +FE ++ ++E
Sbjct: 446 FQARDCDNAQMVFKQMV--SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKME 502
Query: 448 PGAEHYACVVDLLARSGLVDRAYEFIQNMP---IHPTISIWGALL-GACRMHGKTKLGKV 503
P Y +++ + ++G V+ ++ ++ + P + I+ ++ G CR K K
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR-----KGLKE 557
Query: 504 AAEKLFELDPED 515
A+ LF ED
Sbjct: 558 EADALFRKMRED 569
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 195/446 (43%), Gaps = 40/446 (8%)
Query: 171 QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQ 230
+ ++ T ++ ++ R DAV + + + P++ITF ++ GL L +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH------GLFLHNK 205
Query: 231 ------LHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI--GRSRRNVVTWCS 282
L +++ G + ++ +++ K GDI + + +++ + NVV + +
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 283 MLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
++ +L + E+ A +F + K P SS++S + + ++
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMAL 397
++ N+ +AL+D + K G + AE+++ EM +R +I T++++I G+ +D A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 398 GLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVV 457
+FE M C P+ VT ++++ +A ++ G+ +F M + + Y ++
Sbjct: 386 HMFELMISKDC--FPNVVTYNTLINGFCKAKRIDEGVELFREMSQ-RGLVGNTVTYTTLI 442
Query: 458 DLLARSGLVDRAYEFIQNM---PIHPTISIWGALLGACRMHGKTKLGKVAAEKL--FELD 512
++ D A + M +HP I + LL +GK + V E L +++
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 513 PEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSH 572
P ++++ M AG+ E+ + + G+K +V I + F K
Sbjct: 503 PTIYTYNIMIEGM-CKAGKVEDGWDLFCSLSLKGVKPDV----IIYNTMISGFCRKGLKE 557
Query: 573 EKNSEIQAMLAKLREEMKKAGYFPDT 598
E + A+ K+RE+ G PD+
Sbjct: 558 EAD----ALFRKMRED----GPLPDS 575
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 186/456 (40%), Gaps = 46/456 (10%)
Query: 41 PSFLC-NHLINMYSKLDLLNSAQ----HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLH 95
P +C N LI+ Y + A+ +L ++ T T+ LI G A +
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 96 FVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALAL----------KGGQIYDVFV 145
V M+ V P V+ A M G A+ + + Y++ +
Sbjct: 213 LVEMQNHHVSPKTIGV-TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 146 GCSAFDMYSKTGLRVDARNMFDEMP----QRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
++Y K + ++ EM + N+ T+ A ++ ++G A F++
Sbjct: 272 -----NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 326
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGR-QLHAFIIRSGYREDVSVANGLIDFYGKCGDI 260
EP+ + A + + + R G G ++ + + G D + N ++D YG+ G
Sbjct: 327 EDGLEPDVYVYNALMESYS-RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 261 VSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEER---ACLVFLQARKE--AEPTDFMIS 315
+E VF + R ML L+ + + R C ++ E EP F+++
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHML--LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 443
Query: 316 SVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR 375
S+L+ LG + A +I + L+++YGK G +E E++F E+ ++
Sbjct: 444 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 503
Query: 376 N----IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVE 431
N +VTW + IG Y+ + L +FEEM C AP T +LSACS VE
Sbjct: 504 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC--APDGGTAKVLLSACSSEEQVE 561
Query: 432 SGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVD 467
+ +M + G + V L+A+S V+
Sbjct: 562 QVTSVLRTMHK------GVTVSSLVPKLMAKSLTVN 591
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 19/318 (5%)
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV--TWCSMLAALVQNHEEE 294
+S ++ DV N LID YG+ +E ++ ++ SR T+ ++ A E
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 295 RACLVFLQARKEAEPTDFMISSVLSACAE-----LGGLELGRSVHALAVKACVDENIFVG 349
RA +V ++ + + +V +A E G E V +
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 350 SALVDLYGKCGSIENAEQVFSEMP----QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
+ +++LYGK + +++ EM + NI T+ A++ +A +G + A +FE+ L
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ--L 325
Query: 406 GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGL 465
G+ P +++ + SRAG IF M+ + EP Y +VD R+GL
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGL 384
Query: 466 ---VDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVL 522
+ +E ++ + I PT+ LL A + +++ E E + VL
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP--DTFVL 442
Query: 523 SNMLASAGRWEEATIVRK 540
++ML GR + T + K
Sbjct: 443 NSMLNLYGRLGQFTKMEK 460
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 37/264 (14%)
Query: 352 LVDLYGKCGSIENAEQVFSEMPQRNI-------VTWNAMIGGY-AHQGDVDMALGLFEEM 403
L+ Y G IE AE V EM ++ +NA I G +G+ + A+ +F+ M
Sbjct: 196 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 255
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
C P+ T +++ +A ++ M+ ++ +P Y +V+ AR
Sbjct: 256 KRDRC--KPTTETYNLMINLYGKASKSYMSWKLYCEMRS-HQCKPNICTYTALVNAFARE 312
Query: 464 GLVDRA---YEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFEL------DPE 514
GL ++A +E +Q + P + ++ AL+ + G A ++F L +P
Sbjct: 313 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP----YGAAEIFSLMQHMGCEP- 367
Query: 515 DSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEK 574
D ++ ++ + AG +A V +EMK +G IA + H+ S++ K
Sbjct: 368 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG---------IAPTMKSHMLLL--SAYSK 416
Query: 575 NSEIQAMLAKLREEMKKAGYFPDT 598
++ A ++ EM + G PDT
Sbjct: 417 ARDVTKCEAIVK-EMSENGVEPDT 439
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 186/456 (40%), Gaps = 46/456 (10%)
Query: 41 PSFLC-NHLINMYSKLDLLNSAQ----HVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLH 95
P +C N LI+ Y + A+ +L ++ T T+ LI G A +
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 96 FVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALAL----------KGGQIYDVFV 145
V M+ V P V+ A M G A+ + + Y++ +
Sbjct: 235 LVEMQNHHVSPKTIGVT-VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 146 GCSAFDMYSKTGLRVDARNMFDEMP----QRNLATWNAYISNAVQDGRSLDAVGAFKEFL 201
++Y K + ++ EM + N+ T+ A ++ ++G A F++
Sbjct: 294 -----NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 348
Query: 202 CVHGEPNSITFCAFLNACADRLGLHLGR-QLHAFIIRSGYREDVSVANGLIDFYGKCGDI 260
EP+ + A + + + R G G ++ + + G D + N ++D YG+ G
Sbjct: 349 EDGLEPDVYVYNALMESYS-RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 261 VSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEER---ACLVFLQARKE--AEPTDFMIS 315
+E VF + R ML L+ + + R C ++ E EP F+++
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHML--LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 465
Query: 316 SVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR 375
S+L+ LG + A +I + L+++YGK G +E E++F E+ ++
Sbjct: 466 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 525
Query: 376 N----IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVE 431
N +VTW + IG Y+ + L +FEEM C AP T +LSACS VE
Sbjct: 526 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC--APDGGTAKVLLSACSSEEQVE 583
Query: 432 SGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVD 467
+ +M + G + V L+A+S V+
Sbjct: 584 QVTSVLRTMHK------GVTVSSLVPKLMAKSLTVN 613
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 138/323 (42%), Gaps = 19/323 (5%)
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV--TWCSMLAALVQNHEEE 294
+S ++ DV N LID YG+ +E ++ ++ SR T+ ++ A E
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 295 RACLVFLQARKEAEPTDFMISSVLSACAE-----LGGLELGRSVHALAVKACVDENIFVG 349
RA +V ++ + + +V +A E G E V +
Sbjct: 230 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 350 SALVDLYGKCGSIENAEQVFSEMP----QRNIVTWNAMIGGYAHQGDVDMALGLFEEMTL 405
+ +++LYGK + +++ EM + NI T+ A++ +A +G + A +FE+ L
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ--L 347
Query: 406 GSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGL 465
G+ P +++ + SRAG IF M+ + EP Y +VD R+GL
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGL 406
Query: 466 ---VDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPEDSGNHVVL 522
+ +E ++ + I PT+ LL A + +++ E E + VL
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP--DTFVL 464
Query: 523 SNMLASAGRWEEATIVRKEMKDI 545
++ML GR + T + K + ++
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEM 487
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 37/264 (14%)
Query: 352 LVDLYGKCGSIENAEQVFSEMPQRNI-------VTWNAMIGGY-AHQGDVDMALGLFEEM 403
L+ Y G IE AE V EM ++ +NA I G +G+ + A+ +F+ M
Sbjct: 218 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 277
Query: 404 TLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
C P+ T +++ +A ++ M+ ++ +P Y +V+ AR
Sbjct: 278 KRDRC--KPTTETYNLMINLYGKASKSYMSWKLYCEMRS-HQCKPNICTYTALVNAFARE 334
Query: 464 GLVDRA---YEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFEL------DPE 514
GL ++A +E +Q + P + ++ AL+ + G A ++F L +P
Sbjct: 335 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP----YGAAEIFSLMQHMGCEP- 389
Query: 515 DSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEK 574
D ++ ++ + AG +A V +EMK +G IA + H+ S++ K
Sbjct: 390 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG---------IAPTMKSHMLLL--SAYSK 438
Query: 575 NSEIQAMLAKLREEMKKAGYFPDT 598
++ A ++ EM + G PDT
Sbjct: 439 ARDVTKCEAIVK-EMSENGVEPDT 461
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 165/362 (45%), Gaps = 27/362 (7%)
Query: 161 DARNMFDEMPQR----NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFL 216
DA + D+M + + T+ I ++ +AV + +P+ +T+ A +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 217 NACADR----LGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR 272
N R L L+L ++ A I + +V + + +ID K + +F+ +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEA----NVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 273 S--RRNVVTWCSMLAALVQNHEEERAC-LVFLQARKEAEPTDFMISSVLSACAELGGLEL 329
R NV+T+ S+++ L A L+ ++ P S+++ A + G L
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341
Query: 330 GRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIG 385
++ +K +D NIF S+L++ + + A+Q+ M ++ N+VT+N +I
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401
Query: 386 GYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYR 445
G+ VD + LF EM+ G+ + VT +++ +A ++ +F+ M +
Sbjct: 402 GFCKAKRVDKGMELFREMS--QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-G 458
Query: 446 IEPGAEHYACVVDLLARSGLVDRA---YEFIQNMPIHPTISIWGALL-GACRMHGKTKLG 501
+ P Y ++D L ++G + +A +E++Q + P I + ++ G C+ GK K+G
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK-AGKWKMG 517
Query: 502 KV 503
+
Sbjct: 518 GI 519
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 105/519 (20%), Positives = 212/519 (40%), Gaps = 45/519 (8%)
Query: 6 PNLLSSLLESAVSTRSPLLG----RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA 61
P+ S +L+S SPLL + V + S P FL N +I + S+ +L +
Sbjct: 99 PDEASEILKSL---NSPLLAVEFFKLVPSLCPYSQNDP---FLYNRIILILSRSNLPDRF 152
Query: 62 QHVLSL------THLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVF 115
V S+ +++ ++ +++ G N + L V ++ ++ N FT+ C+
Sbjct: 153 DRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLV--KKWDLKMNSFTYKCLL 210
Query: 116 KASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLA 175
+A + + +GG D+F D +K A +F++M +R+
Sbjct: 211 QAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDE---KACQVFEDMKKRHCR 267
Query: 176 ----TWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQL 231
T+ I + G+ +AVG F E + N + + + A + Q+
Sbjct: 268 RDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQV 327
Query: 232 HAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNH 291
+ ++ +G R + + L++ G +V + V I + + ++ L +
Sbjct: 328 FSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE-ISKRYMTQGIYSYLVRTLSKLG 386
Query: 292 EEERACLVF-----LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENI 346
A +F + E + M+ S+ A + +E+ +H K V + +
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE---KGVVTDTM 443
Query: 347 FVGSALVDLYGKCGSIENAEQVFSEM----PQRNIVTWNAMIGGYAHQGDVDMALGLFEE 402
+ L GK I + +F +M P +I T+N +I + G+VD A+ +FEE
Sbjct: 444 MYNTVFSAL-GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 403 MTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLAR 462
+ C P ++ S+++ + G V+ F+ M+E + P Y+ +++ +
Sbjct: 503 LERSDC--KPDIISYNSLINCLGKNGDVDEAHVRFKEMQE-KGLNPDVVTYSTLMECFGK 559
Query: 463 SGLVDRAYEFIQNMPI---HPTISIWGALLGACRMHGKT 498
+ V+ AY + M + P I + LL +G+T
Sbjct: 560 TERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRT 598
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 194/452 (42%), Gaps = 65/452 (14%)
Query: 162 ARNMFDEMPQRNLA----TWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLN 217
A +FDEM QR LA T++ I++ ++G A+ ++ + + + +
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233
Query: 218 ACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS--RR 275
+ + + RSG D+ N +I+ YGK + ++ + +
Sbjct: 234 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293
Query: 276 NVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHA 335
N V++ ++L+ V+NH+ FL+A LS AE+ + A
Sbjct: 294 NTVSYSTLLSVYVENHK-------FLEA--------------LSVFAEMKEVNC-----A 327
Query: 336 LAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQG 391
L + C NI ++D+YG+ ++ A+++F + + N+V++N ++ Y
Sbjct: 328 LDLTTC---NI-----MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE 379
Query: 392 DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAE 451
A+ LF M I + VT +++ + E ++ + M+ IEP A
Sbjct: 380 LFGEAIHLFRLMQ--RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQS-RGIEPNAI 436
Query: 452 HYACVVDLLARSGLVDRAYEFIQNMP---IHPTISIWGALLGACRMHGKTKLGKVAAEKL 508
Y+ ++ + ++G +DRA Q + + ++ ++ A + + L A L
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA---YERVGLMGHAKRLL 493
Query: 509 FELDPEDSGNHVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAK 568
EL D+ +LA AGR EEAT V ++ + G K++ VF
Sbjct: 494 HELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDIS-----------VFGCM 542
Query: 569 DSSHEKNSEIQAMLAKLREEMKKAGYFPDTNL 600
+ + +N ++ ++ E+M+ AGYFPD+N+
Sbjct: 543 INLYSRNQRYVNVI-EVFEKMRTAGYFPDSNV 573
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 163/435 (37%), Gaps = 88/435 (20%)
Query: 58 LNSAQHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFK- 116
L ++ + H T++T +L+ G NG+ A++ M QPN+ T+ V
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 117 ----ASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMP-- 170
++L M + K Y + + D K G +A N+F+EM
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIII-----DGLCKDGSLDNAFNLFNEMEIK 292
Query: 171 --QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLG 228
+ ++ T+N I GR D ++ + PN +TF +++ L
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 229 RQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALV 288
QL +++ G + N LID + K
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCK-------------------------------- 380
Query: 289 QNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFV 348
+N EE +V D MIS K C D +I
Sbjct: 381 ENRLEEAIQMV-----------DLMIS-----------------------KGC-DPDIMT 405
Query: 349 GSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMT 404
+ L++ Y K I++ ++F EM R N VT+N ++ G+ G +++A LF+EM
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 405 LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSG 464
S + P V+ +L G +E + IF + E ++E Y ++ + +
Sbjct: 466 --SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI-EKSKMELDIGIYMIIIHGMCNAS 522
Query: 465 LVDRAYEFIQNMPIH 479
VD A++ ++P+
Sbjct: 523 KVDDAWDLFCSLPLK 537
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/491 (20%), Positives = 191/491 (38%), Gaps = 28/491 (5%)
Query: 33 IRSHETPLPSFLCNHLINMYSKLDLLNSAQHVL----SLTHLRTVVTWTSLIAGCVNNGR 88
+RS F C+ +++ ++ LL A+ S + VT+ +L+ G
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 89 FVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCS 148
+ AL M + + T+ + A + K G + + +
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 149 AFDMYSKTGLRVDARNMFDEMPQR----NLATWNAYISNAVQDGRSLDAVGAFKEFLCVH 204
D Y K G +A +F M + N T+NA +S + RS + + +
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 205 GEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSE 264
PN T+ L C ++ ++ + G+ D N LI YG+CG V +
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 265 MVFSRIGRSRRN--VVTWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSAC 321
++ + R+ N V T+ ++L AL + + V + + +PT+ S +L C
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ-C 570
Query: 322 AELGGLELG-RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----N 376
GG LG + + + + + L+ KC ++ +E+ F+ + +
Sbjct: 571 YAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPD 630
Query: 377 IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHI 436
+V +N+M+ + D A G+ E ++ G++P VT S++ R G I
Sbjct: 631 MVIFNSMLSIFTRNNMYDQAEGILE--SIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 437 FESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP---IHPTISIWGALLGACR 493
+++ E +++P Y V+ R GL+ A + M I P I + +
Sbjct: 689 LKTL-EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS--- 744
Query: 494 MHGKTKLGKVA 504
G T +G A
Sbjct: 745 --GYTAMGMFA 753
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 30/243 (12%)
Query: 266 VFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELG 325
VF ++GRS W +L L +E R+ K + +F S+VLSACA G
Sbjct: 254 VFGKMGRS------WRKILGVL----DEMRS--------KGLKFDEFTCSTVLSACAREG 295
Query: 326 GLELGRSVHALAVKAC-VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTW 380
L + A +K+C + +AL+ ++GK G A V EM + + VT+
Sbjct: 296 LLREAKEFFA-ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTY 354
Query: 381 NAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESM 440
N ++ Y G A G+ E MT G+ P+ +T +V+ A +AG + + +F SM
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMT--KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 441 KEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMPIH---PTISIWGALLGACRMHGK 497
KE + P Y V+ LL + + + + +M + P + W +L C G
Sbjct: 413 KEAGCV-PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 498 TKL 500
K
Sbjct: 472 DKF 474
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/457 (19%), Positives = 185/457 (40%), Gaps = 23/457 (5%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA 132
+ + SLI G R A V M + ++PN FT+ + +
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 133 LALKGGQIYDVFVGCSAFDMYSKTGLRVDA----RNMFDEMPQRNLATWNAYISNAVQDG 188
+ G + + + + Y K G ++A R+M D+ + T+ ++ ++
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
+ DA F+E P+ ++ +N + + + ++ G +V + N
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAALVQNHEEERACLVFLQAR-K 305
L+ + + G+I ++ + + N VT+C+++ ++ + A +F + + K
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 306 EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENA 365
P F+ ++++ C L +E ++ K C +AL++ K G E
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF-NALINWVFKFGKTELK 785
Query: 366 EQV--------FSEMPQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTL 417
+V F + N VT+N MI +G+++ A LF +M + + P+ +T
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ--NANLMPTVITY 843
Query: 418 VSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP 477
S+L+ + G +F+ IEP Y+ +++ + G+ +A + M
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAA-GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 478 IHPTISIWGAL-LGACR--MHGKTKLGKV-AAEKLFE 510
+ L + CR + G K+G++ AEK+ E
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 170/413 (41%), Gaps = 64/413 (15%)
Query: 161 DARNMFDEMPQRNLAT----WNAYISNAVQDGRSLDAVGAFKEFLCVHG-EPNSITFCAF 215
DA + EM ++ +A +N+ I + + +D +F + +G +PN+ T+ AF
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLII-GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 216 LNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSS-----EMVFSRI 270
++ + + + G + + GLI+ Y K G ++ + MV I
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 271 -GRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLEL 329
G ++ T+ ++ L +N + + A +F + R + D
Sbjct: 589 LGDAK----TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD------------------ 626
Query: 330 GRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIG 385
+F L++ + K G+++ A +F EM + N++ +N ++G
Sbjct: 627 ----------------VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 386 GYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYR 445
G+ G+++ A L +EM++ G+ P+ VT +++ ++G + +F+ MK +
Sbjct: 671 GFCRSGEIEKAKELLDEMSVK--GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK-LKG 727
Query: 446 IEPGAEHYACVVDLLARSGLVDRAYEFI--QNMPIHPTISIWGALLGACRMHGKTKLGKV 503
+ P + Y +VD R V+RA + + + AL+ GKT+L
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTE 787
Query: 504 AAEKLFE--LDPEDSGNHV---VLSNMLASAGRWEEATIVRKEMKDIGIKKNV 551
+L + D N V ++ + L G E A + +M++ + V
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/502 (19%), Positives = 189/502 (37%), Gaps = 78/502 (15%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA 132
V T+ LI + R L +MR+ + PN+ T+ +
Sbjct: 303 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING--------------- 347
Query: 133 LALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLA----TWNAYISNAVQDG 188
+S G + A + +EM L+ T+NA I + +G
Sbjct: 348 --------------------FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 387
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
+A+ F P+ +++ L+ L R + + R+G
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 249 GLIDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAALVQ----NHEEERACLVFLQ 302
G+ID K G + + ++ + + + ++VT+ +++ + +E C ++
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY-- 505
Query: 303 ARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSI 362
R P + S+++ C +G L+ ++ + + F + LV K G +
Sbjct: 506 -RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 363 ENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLV 418
AE+ M N V+++ +I GY + G+ A +F+EMT G P++ T
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT--KVGHHPTFFTYG 622
Query: 419 SVLSACSRAGAVESGMHIFESMKEIYRIEPGAEH---YACVVDLLARSGLVDRAYEFIQN 475
S+L + G + +S+ + P A Y ++ + +SG + +A
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAV----PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 678
Query: 476 M---PIHPTISIWGALL-GACRMHGKTKLGKVAAEKLFELDPEDSGN-------HVVLSN 524
M I P + +L+ G CR GK LF + E GN + +
Sbjct: 679 MVQRSILPDSYTYTSLISGLCRK------GKTVIAILFAKEAEARGNVLPNKVMYTCFVD 732
Query: 525 MLASAGRWEEATIVRKEMKDIG 546
+ AG+W+ R++M ++G
Sbjct: 733 GMFKAGQWKAGIYFREQMDNLG 754
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/499 (19%), Positives = 202/499 (40%), Gaps = 45/499 (9%)
Query: 73 VVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHA 132
+VT+++LI G GRF A + R + PN + + + + +
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 133 LALKGGQIYDVFVGCSAFDMYSKTGLRVDA----RNMFDEMPQRNLATWNAYISNAVQDG 188
+ G D F K G +A R M + N +++ I+ G
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Query: 189 RSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLG------RQLHAFIIRSGYRE 242
L A F E V P T+ + L G HL + LHA
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK--GGHLREAEKFLKSLHAVPAAV---- 651
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVV----TWCSMLAALVQNHEEERACL 298
D + N L+ K G++ + +F + +R+++ T+ S+++ L + + + +
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEM--VQRSILPDSYTYTSLISGLCR---KGKTVI 706
Query: 299 VFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDE-----NIFVGSALV 353
L A++ + + + V+ C G + G+ + + +D +I +A++
Sbjct: 707 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 766
Query: 354 DLYGKCGSIENAEQVFSEMPQRN----IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCG 409
D Y + G IE + EM +N + T+N ++ GY+ + DV + L+ + L G
Sbjct: 767 DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN--G 824
Query: 410 IAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYR-IEPGAEHYACVVDLLARSGLVDR 468
I P +T S++ + +E G+ I ++ I R +E + ++ +G ++
Sbjct: 825 ILPDKLTCHSLVLGICESNMLEIGLKILKAF--ICRGVEVDRYTFNMLISKCCANGEINW 882
Query: 469 AYEFIQNMP---IHPTISIWGALLGACRMHGKTKLGKVAAEKLFE--LDPEDSGNHVVLS 523
A++ ++ M I A++ + + + ++ ++ + + PE S ++ L
Sbjct: 883 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE-SRKYIGLI 941
Query: 524 NMLASAGRWEEATIVRKEM 542
N L G + A +V++EM
Sbjct: 942 NGLCRVGDIKTAFVVKEEM 960
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 185/446 (41%), Gaps = 51/446 (11%)
Query: 29 HAQIIR-SHETPLPSFLCNHLINMYSKLDLLNSAQHVLSLTHL---------RTVVTWTS 78
H QI+ SH+ + CN L+N + + S+Q L+ + L +VT+TS
Sbjct: 97 HLQIMGVSHDL----YTCNLLMNCFCQ-----SSQPYLASSFLGKMMKLGFEPDIVTFTS 147
Query: 79 LIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALAL--- 135
LI G R A+ M ++P+ + + + G +AL+L
Sbjct: 148 LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK-----NGHVNYALSLFDQ 202
Query: 136 --KGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQR----NLATWNAYISNAVQDGR 189
G DV + S + +G DA ++ M +R ++ T+NA I V++G+
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 190 SLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANG 249
LDA + E + + PN T+ + +N + RQ+ + G DV
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 250 LIDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAALVQNHEEERACLVFLQARKEA 307
LI+ + KC + + +F + + N +T+ +++ Q + A VF
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 308 EPTDFMISSVLSACAELGG-----LELGRSVHALAVKACVDENIFVGSALVDLYGKC--G 360
P + +VL C G L + + + V NI+ + L L+G C G
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG-VAPNIWTYNVL--LHGLCYNG 439
Query: 361 SIENAEQVFSEMPQRNI----VTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVT 416
+E A VF +M +R + +T+ +I G G V A+ LF +L S G+ P+ VT
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF--CSLPSKGVKPNVVT 497
Query: 417 LVSVLSACSRAGAVESGMHIFESMKE 442
+++S R G +F MKE
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKE 523
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 132/294 (44%), Gaps = 17/294 (5%)
Query: 162 ARNMFDEM----PQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLN 217
A +F++M + N+ T+NA ++ + GR DA ++ + EPN ITF A ++
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 218 ACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS--RR 275
A L ++L+ +I+ DV LI+ G + + +F + R+
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 276 NVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVL-SACAELGGLELGRSVH 334
N V + +++ ++ E +F + ++ + + +VL +G ++ + V
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 335 ALAVKACVDENIFVGSALVDLYGKC--GSIENAEQVFSEMPQR----NIVTWNAMIGGYA 388
+I + L+D G C G +E A +F M +R NIVT+ +I G
Sbjct: 387 NQMSSRRAPPDIRTYNVLLD--GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 389 HQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKE 442
G V+ A LF +L S G+ P+ +T +++S R G + +F+ MKE
Sbjct: 445 KLGKVEDAFDLF--CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 149/338 (44%), Gaps = 26/338 (7%)
Query: 173 NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNA-CADRLGLHLGRQL 231
+L T+ + ++ R DA+ F + L + +PN +T+ + C +R HL +
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR---HLNHAV 208
Query: 232 HAF--IIRSGYREDVSVANGLIDFY---GKCGDI--VSSEMVFSRIGRSRRNVVTWCSML 284
F + +G R +V N L+ G+ GD + +M+ RI NV+T+ +++
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI---EPNVITFTALI 265
Query: 285 AALVQ-NHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVD 343
A V+ E L + + P F S+++ G L+ R + L +
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGL 399
N + + L+ + K +E+ ++F EM Q+ N +T+ +I GY G D+A +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 400 FEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDL 459
F +M+ S P T +L G VE + IFE M++ ++ Y ++
Sbjct: 386 FNQMS--SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK-REMDINIVTYTIIIQG 442
Query: 460 LARSGLVDRAYEFIQNM---PIHPTISIWGALL-GACR 493
+ + G V+ A++ ++ + P + + ++ G CR
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 130/561 (23%), Positives = 212/561 (37%), Gaps = 69/561 (12%)
Query: 2 NFHP----PNLLSSLLESAVSTRSPLLGRAVHAQIIRSHETPLPSFLCNHLINMYSKLDL 57
NF P L S+L +A+ + PLL + IR + L LI + +L L
Sbjct: 101 NFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGL 160
Query: 58 LNSAQHVLS----LTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPC 113
V + L + + ++I V + A L F MR D +P+ FT+
Sbjct: 161 AKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNI 220
Query: 114 VFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRN 173
+ + + + G +VF D + G +A + M R
Sbjct: 221 LIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRK 280
Query: 174 LATWNAYISNAVQD-GRSLDAVGAFKEFLCVHGEPNS---------ITFCAFLNACADRL 223
L A I V R L AF E L E +S + +C N+ A
Sbjct: 281 LNPNEATIRTFVHGIFRCLPPCKAF-EVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKET 339
Query: 224 GLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSRRNVVTWCSM 283
G L + I GY D S N + K D+V + +F G R V +
Sbjct: 340 GQFLRK-----IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFD--GFVSRGVKPGFNG 392
Query: 284 LAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVD 343
LVQ L A++ +E ++ ++G L SV++
Sbjct: 393 YLVLVQ---------ALLNAQRFSEGDRYL--------KQMGVDGLLSSVYSY------- 428
Query: 344 ENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGL 399
+A++D K IENA +EM R N+VT+N + GY+ +GDV G+
Sbjct: 429 ------NAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGV 482
Query: 400 FEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDL 459
E++ + G P +T +++ RA ++ F+ M E + IEP Y ++
Sbjct: 483 LEKLLVH--GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLE-WGIEPNEITYNILIRS 539
Query: 460 LARSGLVDRAYEFIQNMP---IHPTISIWGALLGA-CRMHGKTKLGKVAAEKL-FELDPE 514
+G DR+ + M + P + + A + + C+M K ++ L L P
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP- 598
Query: 515 DSGNHVVLSNMLASAGRWEEA 535
D+ + L L+ +GR EA
Sbjct: 599 DNFTYSTLIKALSESGRESEA 619
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 160/343 (46%), Gaps = 26/343 (7%)
Query: 227 LGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR--SRRNVVTWCSML 284
L + A+++ GY S N ++ F K G + +E + + R +V+++ S++
Sbjct: 39 LSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI 98
Query: 285 AALVQNHEEERACLVFLQARKE----AEPTDFMISSVLSACAELGGLELGRSVHALAVKA 340
+N + A LV R +P +S+ + +++ L+ + +K
Sbjct: 99 DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC 158
Query: 341 CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMA 396
C N+ S +D + K G ++ A + F M + N+VT+ +I GY GD+++A
Sbjct: 159 C-SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 397 LGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACV 456
+ L++EM ++ + VT +++ + G ++ ++ M E R+EP + Y +
Sbjct: 218 VSLYKEMR--RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE-DRVEPNSLVYTTI 274
Query: 457 VDLLARSGLVDRAYEFIQNM---PIHPTISIWGALL-GACRMHGKTKLGKVAAEKLFELD 512
+D + G D A +F+ M + I+ +G ++ G C G KL K A E + +++
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC---GNGKL-KEATEIVEDME 330
Query: 513 PED-SGNHVVLSNMLAS---AGRWEEATIVRKEMKDIGIKKNV 551
D + V+ + M+ + +GR + A + ++ + G + +V
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDV 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 186/468 (39%), Gaps = 78/468 (16%)
Query: 26 RAVHAQIIRSHETPLPSFLCNHLINMYSKLDLLNSA---QHVLSLTHLRTVVTWTSLIAG 82
RA H I + + SF N L N +SK+ +L+ V+ VVT+++ I
Sbjct: 118 RASHGFICKPD---IVSF--NSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDT 172
Query: 83 CVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALALKGGQIYD 142
+G AL F +M+RD + PN TF C+
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCL---------------------------- 204
Query: 143 VFVGCSAFDMYSKTGLRVDARNMFDEMPQ----RNLATWNAYISNAVQDGRSLDAVGAFK 198
D Y K G A +++ EM + N+ T+ A I + G A +
Sbjct: 205 -------IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Query: 199 EFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCG 258
+ EPNS+ + ++ R + A ++ G R D++ A G+I G CG
Sbjct: 258 RMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT-AYGVI-ISGLCG 315
Query: 259 D--IVSSEMVFSRIGRSR--RNVVTWCSMLAALVQNHEEERACLVFLQ-ARKEAEPTDFM 313
+ + + + + +S ++V + +M+ A ++ + A ++ + + EP
Sbjct: 316 NGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVA 375
Query: 314 ISSVLSACAELGGLELGRSVHALAVKACVDE-NIFVGSALVDLYGKCGSIENAEQVFSEM 372
+S+++ A+ G L H V C+++ N + + L+D K G E++FS++
Sbjct: 376 LSTMIDGIAKNGQL------HEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKI 429
Query: 373 PQRNIV----TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAG 428
+ +V + + I G QG++ A L M G+ + +++ + G
Sbjct: 430 SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV--QEGLLLDLLAYTTLIYGLASKG 487
Query: 429 AVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM 476
+ +F+ M + G + V DLL RAYE NM
Sbjct: 488 LMVEARQVFDEM-----LNSGISPDSAVFDLLI------RAYEKEGNM 524
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 125/549 (22%), Positives = 207/549 (37%), Gaps = 103/549 (18%)
Query: 48 LINMYSKLDLLNSA----QHVLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDC 103
L+++Y K L+ A +H+ H VT +++ N+G F A F C
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGW---C 242
Query: 104 VQPNDFTFPCV--FKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSKTGLRVD 161
D + F + S Q P+ KQ ++ L +V
Sbjct: 243 AGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMEL----------------------FKVG 280
Query: 162 ARNMF----------DEMPQ--RNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNS 209
ARN D P+ R +T+N I + GR DA F E L ++
Sbjct: 281 ARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDT 340
Query: 210 ITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSR 269
+TF ++ C L L + G D N L+ + GDI ++ + +
Sbjct: 341 VTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRK 400
Query: 270 IGRSRRNVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLEL 329
I + L + RA L L RK M++ V + AE+ +
Sbjct: 401 IRK------------VGLFPDTVTHRAVLHILCQRK-------MVAEVEAVIAEMDRNSI 441
Query: 330 GRSVHALAV--KACVDENIFVG-------------------SALVDLYGKCGSIENAEQV 368
H++ V + V+E + V +A++D+Y + G AE V
Sbjct: 442 RIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETV 501
Query: 369 F----SEMPQRN-IVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSA 423
F + QRN ++ +N MI Y + AL LF+ M + G P T S+
Sbjct: 502 FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK--NQGTWPDECTYNSLFQM 559
Query: 424 CSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRA---YEFIQNMPIHP 480
+ V+ I M + +PG + YA ++ R GL+ A YE ++ + P
Sbjct: 560 LAGVDLVDEAQRILAEMLD-SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKP 618
Query: 481 TISIWGALLGACRMHGKTKLGKVAAEKLFELDPED--SGNHVVLSNML---ASAGRWEEA 535
++G+L+ G + A + F + E NH+VL++++ + G EEA
Sbjct: 619 NEVVYGSLINGFAESGMVE----EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEA 674
Query: 536 TIVRKEMKD 544
V +MKD
Sbjct: 675 RRVYDKMKD 683
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 184/410 (44%), Gaps = 58/410 (14%)
Query: 162 ARNMFDEMPQ----RNLATWNAYISNAVQDGRSLDAVGAFKEFLC-VHGEPNSITFCAFL 216
AR +FD+M + N+ T+N ++ +G+ DA+G + + P+++T+ L
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 217 NACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRSR-- 274
A + + L ++L + ++G + N L+ Y K G + + + + ++
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 275 RNVVTWCSMLAALVQNHEEERACLVFLQARK--EAEPTDFMISSVLSACAELG------- 325
++ T+ ++ L N R L + A K + +P ++++ C ELG
Sbjct: 308 PDLCTYNILINGLC-NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Query: 326 --------GLELGRSVHALAVK-ACVDENIFVGS----ALVDLYGKCGSIENAEQVFSEM 372
G++ + H +++K C +E + LVD++G FS
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG-----------FSP- 414
Query: 373 PQRNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVES 432
+IVT++ +I Y GD+ AL + EM G GI + +TL ++L A + ++
Sbjct: 415 ---DIVTYHTLIKAYLKVGDLSGALEMMREM--GQKGIKMNTITLNTILDALCKERKLDE 469
Query: 433 GMHIFESM-KEIYRIEPGAEHYACVVDLLARSGLVDRAYEF---IQNMPIHPTISIWGAL 488
++ S K + ++ Y ++ R V++A E ++ + I PT+S + +L
Sbjct: 470 AHNLLNSAHKRGFIVDEVT--YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSL 527
Query: 489 LGACRMHGKTKLGKVAAEKLFE--LDPEDSG-NHVVLSNMLASAGRWEEA 535
+G HGKT+L ++L E L P+DS N ++L GR E+A
Sbjct: 528 IGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG--YCKEGRVEKA 575
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 172/423 (40%), Gaps = 66/423 (15%)
Query: 74 VTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVF-------KASSSLQMPIT 126
VT+ +++ GR ++M+++ + PN T+ + + Q+
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 127 GKQAHALALKGGQIYDVFVG--CSAFDMYSKTGLRV-DARNMFDEMPQRNLATWNAYISN 183
KQ + L Y++ + C+A M + GL + DA P ++ T+N I
Sbjct: 301 MKQTNVLP--DLCTYNILINGLCNAGSM--REGLELMDAMKSLKLQP--DVVTYNTLIDG 354
Query: 184 AVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLN-ACADRLGLHLGRQLHAFIIRSGYRE 242
+ G SL+A ++ + N +T L C + + R++ + G+
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414
Query: 243 DVSVANGLIDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAALVQNHEEERACLVF 300
D+ + LI Y K GD+ + + +G+ + N +T ++L AL + + + A +
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 301 LQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCG 360
A K F++ V G L +G + +
Sbjct: 475 NSAHKRG----FIVDEV-----TYGTLIMG-------------------------FFREE 500
Query: 361 SIENAEQVFSEMPQRNIV----TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVT 416
+E A +++ EM + I T+N++IGG H G ++A+ F+E L G+ P T
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE--LAESGLLPDDST 558
Query: 417 LVSVLSACSRAGAVESGMHIF-ESMKEIYRIEPGAEHYACVVDL--LARSGLVDRAYEFI 473
S++ + G VE + ES+K ++ ++Y C + L L + G+ ++A F
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFK----PDNYTCNILLNGLCKEGMTEKALNFF 614
Query: 474 QNM 476
+
Sbjct: 615 NTL 617
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 131/305 (42%), Gaps = 34/305 (11%)
Query: 309 PTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFV-GSALVDL--YGKCGSIENA 365
P+ + LSA G + + ++ + N+ + L+ L Y SI +A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 366 EQVFSEMPQ----RNIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVL 421
+VF +M + N+ T+N ++ GY +G ++ ALG+ E M + + P VT ++L
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM-VSEFKVNPDNVTYNTIL 247
Query: 422 SACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP---I 478
A S+ G + + MK+ + P Y +V + G + A++ ++ M +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLV-PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 479 HPTISIWGALLGACRMHGKTKLG--KVAAEKLFELDPEDSGNHVVLSNMLASA----GRW 532
P + + L+ G + G + A K +L P+ VV N L G
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD-----VVTYNTLIDGCFELGLS 361
Query: 533 EEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEMKKA 592
EA + ++M++ G+K N I++K + K+ E A+ K++E +
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLK-----WLCKEEKRE------AVTRKVKELVDMH 410
Query: 593 GYFPD 597
G+ PD
Sbjct: 411 GFSPD 415
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 136/298 (45%), Gaps = 19/298 (6%)
Query: 157 GLRVDARNMFDEMPQRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFL 216
G + A + D M + + I+ + G + A+ + H + + + +
Sbjct: 24 GRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIY---- 79
Query: 217 NACADRL---GLHLGRQ-LHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGR 272
NA DRL G H+ Q L + G DV +G+ID + + G +E + +
Sbjct: 80 NAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 273 SRRN--VVTWCSMLAALVQNHEEERACLVFLQA-RKEAEPTDFMISSVLSA-CAELGGLE 328
+ N VVT+ +++ ALV+ + A ++ R+ PT +S++ C + +
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLND 199
Query: 329 LGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMI 384
R + ++A K+C ++ S L++ Y K ++N ++F EM +R N VT+ +I
Sbjct: 200 AKRMLDSMASKSC-SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Query: 385 GGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKE 442
G+ GD+D A L M S G+AP+Y+T S+L++ + I E +++
Sbjct: 259 HGFCQVGDLDAAQDLLNVMI--SSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 128/283 (45%), Gaps = 26/283 (9%)
Query: 207 PNSITFCAFLNA-CADRLGLHLGRQLHAF-----IIRSGYREDVSVANGLIDFYGKCGDI 260
P+ +TF +N C + GR L A ++ G++ ++ NGL K GD
Sbjct: 8 PDVVTFTTLMNGLCCE------GRVLQALALVDRMVEEGHQPYGTIINGLC----KMGDT 57
Query: 261 VSSEMVFSRIGRS--RRNVVTWCSMLAALVQNHEEERACLVFLQAR-KEAEPTDFMISSV 317
S+ + S++ + + +VV + +++ L ++ A +F + K P S +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 318 LSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQRNI 377
+ + G + ++ ++ ++ SAL++ K G + AE+++ +M +R I
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 378 ----VTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESG 433
+T+N+MI G+ Q ++ A + + M SC +P VT ++++ +A V++G
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC--SPDVVTFSTLINGYCKAKRVDNG 235
Query: 434 MHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM 476
M IF M I Y ++ + G +D A + + M
Sbjct: 236 MEIFCEMHR-RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 163/428 (38%), Gaps = 82/428 (19%)
Query: 75 TWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVFKASSSLQMPITGKQAHALA 134
T S+I+ ++GR + A F +R+ ++P +A+
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPR--------------------TRAYNAL 345
Query: 135 LKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNLA----TWNAYISNAVQDGRS 190
LKG Y KTG DA +M EM +R ++ T++ I V GR
Sbjct: 346 LKG---------------YVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 191 LDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGL 250
A KE +PNS F L DR Q+ + G + D N +
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 251 IDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSML-----------AALVQNHEEERAC 297
ID +GK + + F R+ + VTW +++ A + E R C
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 298 LVFLQARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVK---ACVDENIFVGSALVD 354
L A + MI+S G E + L K + N+ + LVD
Sbjct: 511 LPC------ATTYNIMINSY-------GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 355 LYGKCGSIENAEQVFSEMPQRNI----VTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGI 410
+YGK G +A + EM + +NA+I YA +G + A+ F MT S G+
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT--SDGL 615
Query: 411 APSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAY 470
PS + L S+++A + + MKE ++P Y ++ L R VD+
Sbjct: 616 KPSLLALNSLINAFGEDRRDAEAFAVLQYMKE-NGVKPDVVTYTTLMKALIR---VDK-- 669
Query: 471 EFIQNMPI 478
Q +P+
Sbjct: 670 --FQKVPV 675
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 178/450 (39%), Gaps = 31/450 (6%)
Query: 64 VLSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPNDFTFPCVF-------K 116
+LS T +T+ +LI C N AL MR+D Q + + V K
Sbjct: 188 LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK 247
Query: 117 ASSSLQMPITGK-QAHALALKGGQIYDVFVGCSAFDMYSKTGLRVDARNMFDEMPQRNL- 174
S + + + + + L L + D+ +G ++K+G A + L
Sbjct: 248 IDSVMLLRLYKEIERDKLELDVQLVNDIIMG------FAKSGDPSKALQLLGMAQATGLS 301
Query: 175 ---ATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQL 231
AT + IS GR+L+A F+E +P + + A L L +
Sbjct: 302 AKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESM 361
Query: 232 HAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRI--GRSRRNVVTWCSMLAALVQ 289
+ + + G D + LID Y G S+ +V + G + N + +LA
Sbjct: 362 VSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRD 421
Query: 290 NHEEERACLVFLQARK-EAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFV 348
E ++ V + + +P + V+ + L+ + + ++ +
Sbjct: 422 RGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVT 481
Query: 349 GSALVDLYGKCGSIENAEQVFSEMPQRNIV----TWNAMIGGYAHQGDVDMALGLFEEMT 404
+ L+D + K G AE++F M +R + T+N MI Y Q D L +M
Sbjct: 482 WNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMK 541
Query: 405 LGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSG 464
S GI P+ VT +++ ++G + E MK + ++P + Y +++ A+ G
Sbjct: 542 --SQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV-GLKPSSTMYNALINAYAQRG 598
Query: 465 LVDRAYEFIQNMP---IHPTISIWGALLGA 491
L ++A + M + P++ +L+ A
Sbjct: 599 LSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 173/431 (40%), Gaps = 40/431 (9%)
Query: 188 GRSLDAVGAFKEFLCVHGEPNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVA 247
GRS AF L +T+ A + ACA + L A + + GY+ D
Sbjct: 178 GRSEKLYEAF--LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNY 235
Query: 248 NGLIDFYGKCGDIVSSEM--VFSRIGRSR--RNVVTWCSMLAALVQNHEEERA--CLVFL 301
+ +I + I S + ++ I R + +V ++ ++ + +A L
Sbjct: 236 SLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMA 295
Query: 302 QARKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
QA + T ++ S++SA A+ G ++ ++ + +AL+ Y K G
Sbjct: 296 QATGLSAKTATLV-SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 354
Query: 362 IENAEQVFSEMPQRNIV----TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTL 417
+++AE + SEM +R + T++ +I Y + G + A + +EM G + P+
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD--VQPNSFVF 412
Query: 418 VSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNM- 476
+L+ G + + + MK I ++P + Y V+D + +D A M
Sbjct: 413 SRLLAGFRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 477 --PIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDPED-----SGNHVVLSNMLASA 529
I P W L+ HG+ + AE++FE + + ++ N
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGR----HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 527
Query: 530 GRWEEATIVRKEMKDIGIKKNVGYSWIAVKNRVHVFQAKDSSHEKNSEIQAMLAKLREEM 589
RW++ + +MK GI NV + V V+ S N I+ + EEM
Sbjct: 528 ERWDDMKRLLGKMKSQGILPNV----VTHTTLVDVY---GKSGRFNDAIECL-----EEM 575
Query: 590 KKAGYFPDTNL 600
K G P + +
Sbjct: 576 KSVGLKPSSTM 586
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 188/428 (43%), Gaps = 39/428 (9%)
Query: 148 SAFDM----YSKTGLRVDARNMFDEMPQRN----LATWNAYISNAVQDGRSLDAVGAFKE 199
+ FDM Y++ GL +A ++FD M L + N+ +SN V+ G + A+ + +
Sbjct: 156 TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQ 215
Query: 200 FLCVHGEPNSITFCAFLNA-C----ADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFY 254
+ P+ T +NA C D+ + ++ + + G +V N LI+ Y
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDK-AMVFAKETESSL---GLELNVVTYNSLINGY 271
Query: 255 GKCGDIVSSEMVFSRIGRSR---RNVVTWCSMLAALVQNHEEERACLVF-LQARKEAEPT 310
GD+ V R+ R RNVVT+ S++ + E A VF L K+
Sbjct: 272 AMIGDVEGMTRVL-RLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVAD 330
Query: 311 DFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFS 370
M ++ G + VH ++ V N + ++L++ Y K G + AEQ+FS
Sbjct: 331 QHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFS 390
Query: 371 EMPQRNIV----TWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSR 426
M ++ T+N ++ GY G VD AL L ++M + P+ +T +L SR
Sbjct: 391 RMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE--VVPTVMTYNILLKGYSR 448
Query: 427 AGAVESGMHIFESMKEIYRIEPGAEHYAC--VVDLLARSGLVDRAYEFIQNM----PIHP 480
GA + +++ M + A+ +C +++ L + G + A + +N+ +
Sbjct: 449 IGAFHDVLSLWKMM---LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 481 TISIWGALLGACRMHGKTKLGKVAAE-KLFELDPEDSGNHVVLSNMLASAGRWEEATIVR 539
TI++ + G C+M + ++ +F P + LS+ G +EA V+
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA-VQTYQALSHGYYKVGNLKEAFAVK 564
Query: 540 KEMKDIGI 547
+ M+ GI
Sbjct: 565 EYMERKGI 572
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 339 KACVDENIFVGSALVDLYGKCGSIENAEQVFSEM--PQRNI---VTWNAMIGGYAHQGDV 393
K V NI A+ L K G +E+A ++FS++ R I T+ +I G A GD+
Sbjct: 713 KLLVPNNIVYNVAIAGL-CKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 394 DMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHY 453
+ A L +EM L GI P+ VT +++ + G V+ + + + I P A Y
Sbjct: 772 NKAFTLRDEMALK--GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQ-KGITPNAITY 828
Query: 454 ACVVDLLARSGLVDRAYEFIQNMPIHPTISIWGALLGACRMHGKTKLGKVAAEKLFELDP 513
++D L +SG V A + M I L+ G K G V K LDP
Sbjct: 829 NTLIDGLVKSGNVAEAMRLKEKM-------IEKGLV-----RGSDKQGDVDIPKEVVLDP 876
Query: 514 E----DSGNHVVLSNMLASAGRWEEATI 537
E +G + SN L R EA +
Sbjct: 877 EVKLGSTGVIEMNSNELYDVRRVSEAVV 904
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 128/592 (21%), Positives = 239/592 (40%), Gaps = 91/592 (15%)
Query: 7 NLLSSLLESAVSTRSPLLGRAVHAQIIRS-------------HETPLPS-FLCNHLINMY 52
N+ ++LES + G+A+ A + S H+ PS F+ N LI+
Sbjct: 165 NVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGL 224
Query: 53 SKLDLLNSAQHV----LSLTHLRTVVTWTSLIAGCVNNGRFVAALLHFVNMRRDCVQPND 108
K +N A+ + L+ L +++T+ +LI G G + M+ D ++P+
Sbjct: 225 CKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSL 284
Query: 109 FTFPCVFKASSSLQMPITGKQAHALALKGGQIYDVFVGCSAFDMYSK------------- 155
TF + K M + G + D F FD YS
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 156 ---TGLRVDARN---------------MFDEMPQRNLATW---NAYISNAVQDG--RSLD 192
+G++++A +E+ R +A N I N + DG R D
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Query: 193 AVGAFKEFLCVHGE---PNSITF-CAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVAN 248
VGA + + + P+ + + C C + ++++ ++ G V N
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-GVSPSVETYN 463
Query: 249 GLIDFYG------KCGDIVSSEMVFSRIGRSRRNVVTWCSMLAALVQNHEEERACLVFLQ 302
LI YG KC DI+ EM + NVV++ +++ L + + A +V
Sbjct: 464 ILIGGYGRKYEFDKCFDILK-EM---EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 303 AR-KEAEPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGS 361
+ P + + ++ C G +E +K ++ N+ + L+D G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 362 IENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCGIAPSYVTL 417
+ AE + E+ ++ ++ T+N++I GY G+V + L+EEM GI P+ T
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK--RSGIKPTLKTY 637
Query: 418 VSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRAYEFIQNMP 477
++S C++ G +E +F M ++P Y V+ A G +++A+ + M
Sbjct: 638 HLLISLCTKEG-IELTERLFGEMS----LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQM- 691
Query: 478 IHPTISIWGALLGACRMHGKTKLGKVAAEKLF-------ELDPE-DSGNHVV 521
I +I + + + G+ K+GK+ + E++PE D+ N +V
Sbjct: 692 IEKSIGLDKTTYNSL-ILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 283 MLAALVQNHEEERACLVFLQA-RKEAEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 341
+L LV+ + VFL + P+ FM + A +L + G +
Sbjct: 150 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 209
Query: 342 VDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMAL 397
+ ++F+ + L+D K + +AEQ+F EM R +++T+N +I GY G+ + +
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 398 GLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVV 457
+ E M I PS +T ++L +AG VE ++ + MK++ + P A ++ +
Sbjct: 270 KVRERMKADH--IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV-PDAFTFSILF 326
Query: 458 D 458
D
Sbjct: 327 D 327
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 167/400 (41%), Gaps = 54/400 (13%)
Query: 207 PNSITFCAFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMV 266
PN T+ +N + Q + I+ +G D LI Y + D+ S+ V
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 267 FSRIGRS--RRNVVTWCSMLAALVQNHEEERACLVFLQARK-EAEPT----DFMISSVLS 319
F+ + RRN V + ++ L + A +F++ + E PT +I S+
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 320 ACAELGGLELGRSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR---- 375
+ + L L + + +K NI + L+D E A ++ +M ++
Sbjct: 336 SERKSEALNLVKEMEETGIKP----NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 376 NIVTWNAMIGGYAHQGDVDMALGLFE---------------EMTLGSCG----------- 409
N++T+NA+I GY +G ++ A+ + E E+ G C
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN 451
Query: 410 ------IAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARS 463
+ P VT S++ R+G +S + M + + P Y ++D L +S
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND-RGLVPDQWTYTSMIDSLCKS 510
Query: 464 GLVDRA---YEFIQNMPIHPTISIWGALL-GACRMHGKTKLGKVAAEKLFELD-PEDSGN 518
V+ A ++ ++ ++P + ++ AL+ G C+ GK + EK+ + +S
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA-GKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 519 HVVLSNMLASAGRWEEATIVRKEMKDIGIKKNVGYSWIAV 558
L + L + G+ +EAT++ ++M IG++ V I +
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 138/330 (41%), Gaps = 16/330 (4%)
Query: 159 RVD-ARNMFDEMPQR----NLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFC 213
R+D A ++F +M + T+ I + R +A+ KE +PN T+
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 214 AFLNACADRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS 273
+++ + R+L ++ G +V N LI+ Y K G ++ + + S
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG-MIEDAVDVVELMES 421
Query: 274 RR---NVVTWCSMLAALVQNHEEERACLVFLQARKEAEPTDFMISSVLSACAELGGLELG 330
R+ N T+ ++ +++ + ++ ++ P +S++ G +
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 331 RSVHALAVKACVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGG 386
+ +L + + + ++++D K +E A +F + Q+ N+V + A+I G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 387 YAHQGDVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRI 446
Y G VD A + E+M +C P+ +T +++ G ++ + E M +I +
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNC--LPNSLTFNALIHGLCADGKLKEATLLEEKMVKI-GL 598
Query: 447 EPGAEHYACVVDLLARSGLVDRAYEFIQNM 476
+P ++ L + G D AY Q M
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 237 RSGYREDVSVANGLIDFYGKCGDIVSSEMVFSRIGRS--RRNVVTWCSMLAALVQNHEEE 294
+ G++ D ++ G+ + + R + N VT+ ++ + + + +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 295 RACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALAVKACVDENIFVGSALV 353
A VF Q ++ EP +++ A+ G L++ ++ +A + + F S ++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 354 DLYGKCGSIENAEQVFSEMPQR----NIVTWNAMIGGYAHQGDVDMALGLFEEMTLGSCG 409
+ GK G + A ++F EM + N+VT+N MI +A + + AL L+ +M + G
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ--NAG 529
Query: 410 IAPSYVTLVSVLSACSRAGAVESGMHIFESMKEIYRIEPGAEHYACVVDLLARSGLVDRA 469
P VT V+ G +E +F M+ + P Y +VDL ++G VD+A
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKA 588
Query: 470 YEFIQNM---PIHPTISIWGALLGA-CRMH 495
+++ Q M + P + +LL R+H
Sbjct: 589 WQWYQAMLQAGLRPNVPTCNSLLSTFLRVH 618
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 120/276 (43%), Gaps = 17/276 (6%)
Query: 165 MFDEMP----QRNLATWNAYISNAVQDGRSLDAVGAFKEFLCVHGEPNSITFCAFLNACA 220
+ DEM + N T+N I + + +A+ F + EP+ +T+C ++ A
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 221 DRLGLHLGRQLHAFIIRSGYREDVSVANGLIDFYGKCGDIVSSEMVFSR-IGRS-RRNVV 278
L + ++ + +G D + +I+ GK G + ++ +F +G+ N+V
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 279 TWCSMLAALVQNHEEERACLVFLQARKEA-EPTDFMISSVLSACAELGGLELGRSVHALA 337
T+ M+A + E A ++ + +P S V+ G LE V A
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Query: 338 VKA--CVDENIFVGSALVDLYGKCGSIENAEQVFSEMPQ----RNIVTWNAMIGGYAHQG 391
+ DE ++ LVDL+GK G+++ A Q + M Q N+ T N+++ +
Sbjct: 561 QRKNWVPDEPVY--GLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVH 618
Query: 392 DVDMALGLFEEMTLGSCGIAPSYVTLVSVLSACSRA 427
+ A L + M + G+ PS T +LS C+ A
Sbjct: 619 RMSEAYNLLQSML--ALGLHPSLQTYTLLLSCCTDA 652