Miyakogusa Predicted Gene

Lj4g3v1881330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1881330.1 Non Chatacterized Hit- tr|I1LZP3|I1LZP3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26993
PE,80.49,0,seg,NULL,CUFF.49858.1
         (405 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24150.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   254   8e-68
AT4G32295.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   216   3e-56
AT4G32295.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   105   4e-23

>AT3G24150.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT4G32295.1); Has 50 Blast hits to 50 proteins in
           12 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi
           - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2
           (source: NCBI BLink). | chr3:8724273-8725586 REVERSE
           LENGTH=343
          Length = 343

 Score =  254 bits (649), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 130/234 (55%), Positives = 157/234 (67%), Gaps = 16/234 (6%)

Query: 1   MPRPGPRPYECVRRAWHSERHQPIRGTIIQQIFRVVNDAHSPATKKNKEWQEKLPFVVLK 60
           MPRPGPRPYECV+RAWHS+RHQPIRG+II+QIFR+  +AHS AT+KNKEWQEKLP VVLK
Sbjct: 1   MPRPGPRPYECVKRAWHSDRHQPIRGSIIRQIFRLAMEAHSAATRKNKEWQEKLPVVVLK 60

Query: 61  AEEIMYSKANSEAEYLNPDTLWDRLNDAVNTIIRRDEATETGDLLPPCVEAALNLGCKPV 120
           AEEIMYSKANSE EY + DT+W+R+NDA++TIIRRDE+TETG LLPPCVEAALNLGC  V
Sbjct: 61  AEEIMYSKANSEEEYTDADTMWNRVNDAIDTIIRRDESTETGPLLPPCVEAALNLGCIAV 120

Query: 121 RTSRSDRHNNPRTYLXXXXXXXXXXXXXX-------XXXXXLNYARVTTSALASVPVSNS 173
           R SRS RH++ RTYL                           +  + + +  A+VPV   
Sbjct: 121 RASRSQRHSSGRTYLGPKIQEPVSASTNEPSYHHEYRQQAQQSSTKPSQTVQAAVPVDVL 180

Query: 174 THQSSKVMGNRSYPFSDNFPSGHHQPLAME---------AKPSLNLGSVYPLYY 218
            + + +V   R YPF       H +PLA+          A   +NLGSVYPLYY
Sbjct: 181 DNSNKRVATPRGYPFLHESMQMHQKPLAIRQGTGPASAPAPAPVNLGSVYPLYY 234


>AT4G32295.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G24150.1); Has 39 Blast hits to 39 proteins in
           10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr4:15592960-15594080 FORWARD
           LENGTH=238
          Length = 238

 Score =  216 bits (549), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 97/135 (71%), Positives = 115/135 (85%)

Query: 1   MPRPGPRPYECVRRAWHSERHQPIRGTIIQQIFRVVNDAHSPATKKNKEWQEKLPFVVLK 60
           MPRPGPRPY+C+RRAWHS+RHQP+RG +IQ+IFR+V + HS +T+KN EWQEKLP VVL+
Sbjct: 1   MPRPGPRPYDCIRRAWHSDRHQPMRGLLIQEIFRIVCEIHSQSTRKNTEWQEKLPVVVLR 60

Query: 61  AEEIMYSKANSEAEYLNPDTLWDRLNDAVNTIIRRDEATETGDLLPPCVEAALNLGCKPV 120
           AEEIMYSKANSEAEY++  TL DR NDA+NTIIR DE TETG+ L PC+EAAL+LGC P 
Sbjct: 61  AEEIMYSKANSEAEYMDMKTLLDRTNDAINTIIRLDETTETGEFLQPCIEAALHLGCTPR 120

Query: 121 RTSRSDRHNNPRTYL 135
           R SRS R+ NPR YL
Sbjct: 121 RASRSQRNINPRCYL 135


>AT4G32295.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; BEST Arabidopsis thaliana
           protein match is: unknown protein (TAIR:AT3G24150.1);
           Has 34 Blast hits to 34 proteins in 8 species: Archae -
           0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34;
           Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
           | chr4:15593259-15594080 FORWARD LENGTH=174
          Length = 174

 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/71 (70%), Positives = 57/71 (80%)

Query: 65  MYSKANSEAEYLNPDTLWDRLNDAVNTIIRRDEATETGDLLPPCVEAALNLGCKPVRTSR 124
           MYSKANSEAEY++  TL DR NDA+NTIIR DE TETG+ L PC+EAAL+LGC P R SR
Sbjct: 1   MYSKANSEAEYMDMKTLLDRTNDAINTIIRLDETTETGEFLQPCIEAALHLGCTPRRASR 60

Query: 125 SDRHNNPRTYL 135
           S R+ NPR YL
Sbjct: 61  SQRNINPRCYL 71