Miyakogusa Predicted Gene

Lj4g3v1880850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1880850.1 Non Chatacterized Hit- tr|C6SYG8|C6SYG8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2865
PE=,91.58,0,YABBY,YABBY protein; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.49822.1
         (190 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26580.2 | Symbols: YAB5 | plant-specific transcription facto...   262   1e-70
AT2G26580.1 | Symbols: YAB5 | plant-specific transcription facto...   262   1e-70
AT1G08465.1 | Symbols: YAB2 | Plant-specific transcription facto...   177   4e-45
AT2G45190.1 | Symbols: AFO, FIL, YAB1 | Plant-specific transcrip...   170   5e-43
AT4G00180.1 | Symbols: YAB3 | Plant-specific transcription facto...   158   2e-39
AT4G00180.2 | Symbols: YAB3 | Plant-specific transcription facto...   135   1e-32
AT1G23420.1 | Symbols: INO | Plant-specific transcription factor...   130   8e-31
AT1G69180.1 | Symbols: CRC | Plant-specific transcription factor...   122   2e-28

>AT2G26580.2 | Symbols: YAB5 | plant-specific transcription factor
           YABBY family protein | chr2:11303923-11306739 REVERSE
           LENGTH=164
          Length = 164

 Score =  262 bits (669), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 127/162 (78%), Positives = 141/162 (87%), Gaps = 5/162 (3%)

Query: 12  ASEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQNLQAP 71
           A+EQLCYIPCNFCNI+LAV+VPCSSLFDIVTVRCGHCTNLWSVNMAAA QSLS  N QA 
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQAT 66

Query: 72  GHCNPEYRIDTGSTSKCNNRLAMRAPTTHHVTEERIVNRPPEKRQRVPSAYNQFIKEEIQ 131
            +  PEY    GS+S+ + ++  R  +T  +TE+RIVNRPPEKRQRVPSAYNQFIKEEIQ
Sbjct: 67  NYAVPEY----GSSSRSHTKIPSRI-STRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQ 121

Query: 132 RIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLENNNQAKM 173
           RIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLE+N QAK+
Sbjct: 122 RIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKI 163


>AT2G26580.1 | Symbols: YAB5 | plant-specific transcription factor
           YABBY family protein | chr2:11303923-11306739 REVERSE
           LENGTH=164
          Length = 164

 Score =  262 bits (669), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 127/162 (78%), Positives = 141/162 (87%), Gaps = 5/162 (3%)

Query: 12  ASEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQNLQAP 71
           A+EQLCYIPCNFCNI+LAV+VPCSSLFDIVTVRCGHCTNLWSVNMAAA QSLS  N QA 
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQAT 66

Query: 72  GHCNPEYRIDTGSTSKCNNRLAMRAPTTHHVTEERIVNRPPEKRQRVPSAYNQFIKEEIQ 131
            +  PEY    GS+S+ + ++  R  +T  +TE+RIVNRPPEKRQRVPSAYNQFIKEEIQ
Sbjct: 67  NYAVPEY----GSSSRSHTKIPSRI-STRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQ 121

Query: 132 RIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLENNNQAKM 173
           RIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLE+N QAK+
Sbjct: 122 RIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKI 163


>AT1G08465.1 | Symbols: YAB2 | Plant-specific transcription factor
           YABBY family protein | chr1:2676033-2679382 FORWARD
           LENGTH=184
          Length = 184

 Score =  177 bits (449), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 96/176 (54%), Positives = 117/176 (66%), Gaps = 17/176 (9%)

Query: 7   IDVAPASEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW- 65
           + V  +SE++CY+ C+FC  +LAVSVP +SLF +VTVRCGHCTNL S+N+  +    S  
Sbjct: 1   MSVDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAP 60

Query: 66  ---QNLQAPGHCNPEY--RIDTGSTSKCNNRLA----MRAPTTHHVTEERIVNRPPEKRQ 116
              Q+LQ           R D  S+S+  N L+      AP    +       RPPEKRQ
Sbjct: 61  PIHQDLQPHRQHTTSLVTRKDCASSSRSTNNLSENIDREAPRMPPI-------RPPEKRQ 113

Query: 117 RVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLENNNQAK 172
           RVPSAYN+FIKEEIQRIKA NP+ISHREAFSTAAKNWAHFPHIHFGL L+ N + K
Sbjct: 114 RVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGK 169


>AT2G45190.1 | Symbols: AFO, FIL, YAB1 | Plant-specific
           transcription factor YABBY family protein |
           chr2:18628450-18630552 REVERSE LENGTH=229
          Length = 229

 Score =  170 bits (430), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/172 (55%), Positives = 113/172 (65%), Gaps = 17/172 (9%)

Query: 13  SEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQ-NLQAP 71
           S+ LCY+ CNFC  +LAV+VP +SLF  VTVRCG CTNL SVNM +     S Q  LQ  
Sbjct: 22  SDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLG 81

Query: 72  GHC--NPEYRIDT--GSTSKCNNRLAMRAPTT------------HHVTEERIVNRPPEKR 115
            H   NP+  ++    + S  N  +  + PT             H + +   VNRPPEKR
Sbjct: 82  PHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPPVNRPPEKR 141

Query: 116 QRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEN 167
           QRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHFPHIHFGL+ +N
Sbjct: 142 QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDN 193


>AT4G00180.1 | Symbols: YAB3 | Plant-specific transcription factor
           YABBY family protein | chr4:72804-75089 REVERSE
           LENGTH=240
          Length = 240

 Score =  158 bits (400), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/191 (48%), Positives = 116/191 (60%), Gaps = 33/191 (17%)

Query: 8   DVAPASEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQN 67
           D   +++QLCY+ C+FC+ VLAVSVP SSLF  VTVRCGHC+NL SV ++   ++L   +
Sbjct: 17  DHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVS--MRALLLPS 74

Query: 68  LQAPGHC-----------NPEYRIDTGSTSKCNNRLAMRAPTTHHVTEERIV-------- 108
           +   GH            N    + +G  +   N +     + HH  E  ++        
Sbjct: 75  VSNLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSV 134

Query: 109 ------------NRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHF 156
                       NRPPEKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHF
Sbjct: 135 DHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 194

Query: 157 PHIHFGLMLEN 167
           PHIHFGLM ++
Sbjct: 195 PHIHFGLMADH 205


>AT4G00180.2 | Symbols: YAB3 | Plant-specific transcription factor
           YABBY family protein | chr4:72804-74888 REVERSE
           LENGTH=209
          Length = 209

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/176 (47%), Positives = 102/176 (57%), Gaps = 33/176 (18%)

Query: 23  FCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQNLQAPGHC-------- 74
            C+I   VSVP SSLF  VTVRCGHC+NL SV ++   ++L   ++   GH         
Sbjct: 1   MCDINWQVSVPPSSLFKTVTVRCGHCSNLLSVTVS--MRALLLPSVSNLGHSFLPPPPPP 58

Query: 75  ---NPEYRIDTGSTSKCNNRLAMRAPTTHHVTEERIV--------------------NRP 111
              N    + +G  +   N +     + HH  E  ++                    NRP
Sbjct: 59  PPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRP 118

Query: 112 PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEN 167
           PEKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHFPHIHFGLM ++
Sbjct: 119 PEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADH 174


>AT1G23420.1 | Symbols: INO | Plant-specific transcription factor
           YABBY family protein | chr1:8317423-8319104 FORWARD
           LENGTH=231
          Length = 231

 Score =  130 bits (326), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 75/163 (46%), Positives = 101/163 (61%), Gaps = 19/163 (11%)

Query: 15  QLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVN-MAAAFQSLSWQNLQAPGH 73
           Q+C++ C FC  +L VSVP +SL  +VTVRCGHCT+L SVN M A+F  +    L +  H
Sbjct: 20  QICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASF--IPLHLLASLSH 77

Query: 74  CNPEYRIDTGSTSKCN------NRLAMRAPTTHHVTEE----------RIVNRPPEKRQR 117
            +   + +  +T          N+    +PTT   + +          ++VN+PPEKRQR
Sbjct: 78  LDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQR 137

Query: 118 VPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIH 160
            PSAYN FIKEEI+R+KA NP ++H+EAFS AAKNWAHFP  H
Sbjct: 138 APSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH 180


>AT1G69180.1 | Symbols: CRC | Plant-specific transcription factor
           YABBY family protein | chr1:26007734-26008940 REVERSE
           LENGTH=181
          Length = 181

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 5/147 (3%)

Query: 10  APASEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQNLQ 69
           +P +E L Y+ C+ CN +LAV +P   + D VTV+CGHC NL  +      Q      LQ
Sbjct: 15  SPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLTTTPPLQGHVSLTLQ 74

Query: 70  APGHCNPEYRIDTGSTSKCNNRLAMRAPTTHHVTEERIVNRPPEKRQRVPSAYNQFIKEE 129
                  +Y+         ++  +  +           V +PPEK+QR+PSAYN+F+++E
Sbjct: 75  MQSFGGSDYK-----KGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQRLPSAYNRFMRDE 129

Query: 130 IQRIKANNPDISHREAFSTAAKNWAHF 156
           IQRIK+ NP+I HREAFS AAKNWA +
Sbjct: 130 IQRIKSANPEIPHREAFSAAAKNWAKY 156