Miyakogusa Predicted Gene
- Lj4g3v1880660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1880660.1 Non Chatacterized Hit- tr|I1LZX2|I1LZX2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.34,0,no
description,NULL; LRR_6,NULL; F-box-like,NULL; SUBFAMILY NOT
NAMED,NULL; F-BOX/LEUCINE RICH REPEA,CUFF.49829.1
(683 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1... 654 0.0
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr... 613 e-176
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 166 6e-41
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 114 3e-25
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 101 2e-21
AT5G01720.1 | Symbols: | RNI-like superfamily protein | chr5:26... 97 6e-20
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch... 88 2e-17
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr... 88 2e-17
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei... 87 3e-17
AT3G58530.1 | Symbols: | RNI-like superfamily protein | chr3:21... 78 2e-14
AT3G07550.2 | Symbols: | RNI-like superfamily protein | chr3:24... 70 4e-12
AT3G07550.1 | Symbols: | RNI-like superfamily protein | chr3:24... 70 4e-12
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276... 69 1e-11
AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 | chr1:436... 67 6e-11
AT4G33210.1 | Symbols: SLOMO | F-box family protein | chr4:16015... 66 9e-11
AT2G17020.1 | Symbols: | F-box/RNI-like superfamily protein | c... 63 5e-10
AT1G80630.1 | Symbols: | RNI-like superfamily protein | chr1:30... 63 7e-10
AT4G30640.1 | Symbols: | RNI-like superfamily protein | chr4:14... 63 8e-10
AT2G06040.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-ri... 61 2e-09
AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 | chr4:41978... 61 2e-09
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting prote... 61 3e-09
AT5G51370.2 | Symbols: | RNI-like superfamily protein | chr5:20... 61 3e-09
AT5G07670.1 | Symbols: | RNI-like superfamily protein | chr5:24... 61 3e-09
AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 | chr3:986... 60 5e-09
AT5G21900.1 | Symbols: | RNI-like superfamily protein | chr5:72... 57 3e-08
AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 | chr3:18572... 57 4e-08
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 ... 57 5e-08
AT1G55590.1 | Symbols: | RNI-like superfamily protein | chr1:20... 56 8e-08
AT1G80570.1 | Symbols: | RNI-like superfamily protein | chr1:30... 55 2e-07
AT1G80570.3 | Symbols: | RNI-like superfamily protein | chr1:30... 55 2e-07
AT1G80570.2 | Symbols: | RNI-like superfamily protein | chr1:30... 55 2e-07
AT4G24390.1 | Symbols: | RNI-like superfamily protein | chr4:12... 55 2e-07
AT4G24390.2 | Symbols: | RNI-like superfamily protein | chr4:12... 55 2e-07
AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 | chr5... 53 8e-07
AT5G51370.1 | Symbols: | RNI-like superfamily protein | chr5:20... 53 8e-07
AT5G67140.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 2e-06
AT5G51380.1 | Symbols: | RNI-like superfamily protein | chr5:20... 52 2e-06
AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein... 51 2e-06
AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr... 50 5e-06
>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
chr2:10848018-10850275 REVERSE LENGTH=628
Length = 628
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/635 (52%), Positives = 456/635 (71%), Gaps = 10/635 (1%)
Query: 52 MPTLINYSGDDELYQGGSFCSSPMDLGRLYTISSNVDSYYPSTKRARVSAPFIFETLQKP 111
M + +++G+++ Y+ G+ +P D L ++ S D Y+P +KR+RV AP IF +K
Sbjct: 1 MSQIFSFAGENDFYRRGAIYPNPKDASLLLSLGSFADVYFPPSKRSRVVAPTIFSAFEKK 60
Query: 112 --GIEVLPDECLFEIFRRLPSSKERSSCACVSKKWLMLMSSICKAEIEDVEMRSSXXXXX 169
I+VLPDECLFEIFRRL +ERS+CA VSK+WL L+SSI + EI+ + S
Sbjct: 61 PVSIDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVSSIRQKEID---VPSKITEDG 117
Query: 170 XXXXXYLTRSLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGC 229
L+RSL+GKKATDVRLAAIAVGT+GRGGLGKLSIRGSNS + V++LGL ++ C
Sbjct: 118 DDCEGCLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSNSAK-VSDLGLRSIGRSC 176
Query: 230 PSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNI 289
PSL SLSLWNVS+I D GL +IA+GC LEKL+L STI++KGL+AIA+ CPN+T L +
Sbjct: 177 PSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTL 236
Query: 290 ESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXX-XXXRVKLQSLNITD 348
E+CS+IG+EGL A+AR C KL+S+SIK+CPLV D G+ ++KLQ LN+TD
Sbjct: 237 EACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQMLNVTD 296
Query: 349 FSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAM 408
SLAV+GHYG ++T LVL+GL +V+E+GFWVMG GLQKL S T+T+C+GVTD +E++
Sbjct: 297 VSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESV 356
Query: 409 GKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKF 468
GKGC N+K+ + K +SD+GLV+FAKA+ +LESLQLEEC+RVTQ G G++ N K
Sbjct: 357 GKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKL 416
Query: 469 KSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTG 528
K+ ++V C+ ++++ + S C LRSL I+NCPGFG ++LA IGKLCPQL+ +DL G
Sbjct: 417 KAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDLCG 476
Query: 529 LYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGGTLELLNLDGCWRITD 588
L GIT++G L L+ ++ LVK+N +GC NLTD V+S + +G TLE+LN+DGC ITD
Sbjct: 477 LKGITESGFLHLI---QSSLVKINFSGCSNLTDRVISAITARNGWTLEVLNIDGCSNITD 533
Query: 589 ASLVAIADNCLLLNDLDVSKCAITDAGLAVXXXXXXXXXXXXXXXXCCDLSNKSVAFLTK 648
ASLV+IA NC +L+DLD+SKCAI+D+G+ C +++KS+ +
Sbjct: 534 ASLVSIAANCQILSDLDISKCAISDSGIQALASSDKLKLQILSVAGCSMVTDKSLPAIVG 593
Query: 649 LGQTLLGLNLQHCSSIGSSTIELLVENLWRCDILA 683
LG TLLGLNLQ C SI +ST++ LVE L++CDIL+
Sbjct: 594 LGSTLLGLNLQQCRSISNSTVDFLVERLYKCDILS 628
>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
chr5:8794842-8796882 REVERSE LENGTH=623
Length = 623
Score = 613 bits (1582), Expect = e-176, Method: Compositional matrix adjust.
Identities = 330/636 (51%), Positives = 432/636 (67%), Gaps = 19/636 (2%)
Query: 52 MPTLINYSGDDELYQGGSFCSSPMDLGRLYTISSNVDSYYPSTKRARVSAPFIFETLQ-- 109
M + +SGD++ GGS SP S YYP+ KR RV+A + +
Sbjct: 1 MSGIFRFSGDEDCLLGGSMYLSP---------GSCPGVYYPARKRLRVAATSFYSGFEEK 51
Query: 110 KPGIEVLPDECLFEIFRRLPSSKERSSCACVSKKWLMLMSSICKAEIEDVEMRSSXXXXX 169
+ I+VLP+ECLFEI RRLPS +ERS+CACVSK WL L+SSI ++E+ + S
Sbjct: 52 QTSIDVLPEECLFEILRRLPSGQERSACACVSKHWLNLLSSISRSEVNE-----SSVQDV 106
Query: 170 XXXXXYLTRSLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGC 229
+L+RSLEGKKATD+RLAAIAVGTS RGGLGKL IRGS VT++GL AVAHGC
Sbjct: 107 EEGEGFLSRSLEGKKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTDVGLGAVAHGC 166
Query: 230 PSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNI 289
PSL+ +SLWN+ ++ D GLS+IA+ C M+EKLDL I++ GL+AIAE C N++ L I
Sbjct: 167 PSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTI 226
Query: 290 ESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXX-XXXXRVKLQSLNITD 348
+SCS +GNEGL+A+AR C L+SISI+ CP +GD GV +VKLQ LN++
Sbjct: 227 DSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNVSG 286
Query: 349 FSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAM 408
SLAVIGHYG A+T LVL GLQ V E+GFWVMG A+GL+KL S +V SCRG+TD +EA+
Sbjct: 287 LSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLEAV 346
Query: 409 GKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKF 468
G GC +LK +SL KC VS GLVA AK+A +LESL+LEEC+R+ Q G++G + N SK
Sbjct: 347 GNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNCGSKL 406
Query: 469 KSLTIVKCMGVKEID-ADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLT 527
K+ ++ C+G+ + + C +LRSL I+ CPGFG +SLA +GK C QLQ V+L
Sbjct: 407 KAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVELC 466
Query: 528 GLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGGTLELLNLDGCWRIT 587
GL G+TDAG+ LL++ GLVKVNL+ C N++DN VS ++ HG TLE LNLDGC IT
Sbjct: 467 GLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKNIT 526
Query: 588 DASLVAIADNCLLLNDLDVSKCAITDAGL-AVXXXXXXXXXXXXXXXXCCDLSNKSVAFL 646
+ASLVA+A NC +NDLD+S ++D G+ A+ C +++KS A +
Sbjct: 527 NASLVAVAKNCYSVNDLDISNTLVSDHGIKALASSPNHLNLQVLSIGGCSSITDKSKACI 586
Query: 647 TKLGQTLLGLNLQHCSSIGSSTIELLVENLWRCDIL 682
KLG+TLLGLN+Q C I SST++ L+ENLWRCDIL
Sbjct: 587 QKLGRTLLGLNIQRCGRISSSTVDTLLENLWRCDIL 622
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 255/558 (45%), Gaps = 80/558 (14%)
Query: 116 LPDECLFEIFRRLPSSKERSSCACVSKKWLMLMSSICKAEIEDVEMRSSXXXXXXXXXXY 175
LP+E + EIFRRL S R +C+ V K+WL L +R
Sbjct: 11 LPEELILEIFRRLESKPNRDACSLVCKRWLSL------ERFSRTTLRIGASFSPDDFISL 64
Query: 176 LTRSL-----------------------EGKKATDVRLAAIAVGTSGRGGLGKLSIRGSN 212
L+R + K+ D + +S R L + G+
Sbjct: 65 LSRRFLYITSIHVDERISVSLPSLSPSPKRKRGRDSSSPS----SSKRKKLTDKTHSGAE 120
Query: 213 SVR--GVTNLGLSAVAHGCPSLKSLSL-W--NVSS----------------------IGD 245
+V +T+ GL+A+A+G P +++LSL W NVSS +GD
Sbjct: 121 NVESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGD 180
Query: 246 EGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGC-PNMTTLNIESCSKIGNEGLQAVA 304
+GL+ + K C LE+L+L +++ G+I + GC ++ ++ + + +KI + L+AV
Sbjct: 181 QGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVG 240
Query: 305 RFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGKALTHL 364
C L+ + + D + D G+ +KLQ +++TD + A +G +L L
Sbjct: 241 SHCKLLEVLYL-DSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERL 299
Query: 365 VLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCC 424
L Q+ T++G +G +G +KL T++ C V+ +EA+ GC L+++ + C
Sbjct: 300 ALYSFQHFTDKGMRAIG--KGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCH 357
Query: 425 FVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTI---VKCMGVKE 481
+ G+ A K+ L+ L L C R+ S A+ I KSL I V C G+ +
Sbjct: 358 NIGTRGIEAIGKSCPRLKELALLYCQRIGNS----ALQEIGKGCKSLEILHLVDCSGIGD 413
Query: 482 IDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLL 541
I A S+ C L+ L I+ C G+ + IGK C L + L + + L+ +
Sbjct: 414 I-AMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIG 472
Query: 542 ENCEAGLVKVNLTGCWNLTDNVVSTLARLHGGTLELLNLD--GCWRITDASLVAIADNCL 599
+ C L ++N++GC ++D ++ +AR G +L +LD I D L + + C
Sbjct: 473 KGCS--LQQLNVSGCNQISDAGITAIAR---GCPQLTHLDISVLQNIGDMPLAELGEGCP 527
Query: 600 LLNDLDVSKC-AITDAGL 616
+L DL +S C ITD GL
Sbjct: 528 MLKDLVLSHCHHITDNGL 545
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 206/434 (47%), Gaps = 47/434 (10%)
Query: 217 VTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIA 276
V+++GL ++A C SLKSL L +GD+GL+ + K C LE+L+L +++ G+I
Sbjct: 153 VSSVGLCSLAQKCTSLKSLDLQGCY-VGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVID 211
Query: 277 IAEGC-PNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXX 335
+ GC ++ ++ + + +KI + L+AV C L+ + + D + D G+
Sbjct: 212 LVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYL-DSEYIHDKGLIAVAQGCHR 270
Query: 336 XXRVKLQSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVT 395
+KLQ +++TD + A +G +L L L Q+ T++G +G +G +KL T++
Sbjct: 271 LKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIG--KGSKKLKDLTLS 328
Query: 396 SCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQS 455
C V+ +EA+ GC L+++ + C + G+ A K+ L+ L L C R+ S
Sbjct: 329 DCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNS 388
Query: 456 GIIGAISNIKSKFKSLTI---VKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLA 512
A+ I KSL I V C G+ +I A S+ C L+ L I+ C G+ +
Sbjct: 389 ----ALQEIGKGCKSLEILHLVDCSGIGDI-AMCSIAKGCRNLKKLHIRRCYEIGNKGII 443
Query: 513 MIGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHG 572
IGK C L + L + + L+ + + C L ++N++GC ++D ++ +AR
Sbjct: 444 SIGKHCKSLTELSLRFCDKVGNKALIAIGKGCS--LQQLNVSGCNQISDAGITAIAR--- 498
Query: 573 GTLELLNLD----------------------------GCWRITDASLVAIADNCLLLNDL 604
G +L +LD C ITD L + C LL
Sbjct: 499 GCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETC 558
Query: 605 DVSKC-AITDAGLA 617
+ C IT AG+A
Sbjct: 559 HMVYCPGITSAGVA 572
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 169/397 (42%), Gaps = 84/397 (21%)
Query: 217 VTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIA 276
VT++ +AV C SL+ L+L++ D+G+ I KG L+ L L +S KGL A
Sbjct: 281 VTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEA 340
Query: 277 IAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXX 336
IA GC + + I C IG G++A+ + CP+L+ +++ C +G+
Sbjct: 341 IAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGN------------- 387
Query: 337 XRVKLQSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTS 396
S LQ + +G + L +
Sbjct: 388 ------------------------------SALQE----------IGKGCKSLEILHLVD 407
Query: 397 CRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSG 456
C G+ D ++ ++ KGC NLK++ +R+C + + G+++ K +L L L C++V
Sbjct: 408 CSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKA 467
Query: 457 IIGAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGK 516
+I ++ C +L+ L + C + + I +
Sbjct: 468 LI----------------------------AIGKGC-SLQQLNVSGCNQISDAGITAIAR 498
Query: 517 LCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGGTLE 576
CPQL H+D++ L I D L L E C L + L+ C ++TDN ++ L + LE
Sbjct: 499 GCPQLTHLDISVLQNIGDMPLAELGEGCPM-LKDLVLSHCHHITDNGLNHLVQ-KCKLLE 556
Query: 577 LLNLDGCWRITDASLVAIADNCLLLNDLDVSKCAITD 613
++ C IT A + + +C + + + K +T+
Sbjct: 557 TCHMVYCPGITSAGVATVVSSCPHIKKVLIEKWKVTE 593
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 28/252 (11%)
Query: 212 NSVRGVTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISN 271
N + G+ A+ CP LK L+L IG+ L +I KGC LE L L S I +
Sbjct: 354 NGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGD 413
Query: 272 KGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXX 331
+ +IA+GC N+ L+I C +IGN+G+ ++ + C L +S++ C VG+
Sbjct: 414 IAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNK------- 466
Query: 332 XXXXXXRVKLQSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVS 391
+L IG G +L L +SG +++ G + +A+G +L
Sbjct: 467 ------------------ALIAIGK-GCSLQQLNVSGCNQISDAG--ITAIARGCPQLTH 505
Query: 392 FTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNR 451
++ + + D + +G+GC LK + L C ++D+GL + LE+ + C
Sbjct: 506 LDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPG 565
Query: 452 VTQSGIIGAISN 463
+T +G+ +S+
Sbjct: 566 ITSAGVATVVSS 577
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 32/313 (10%)
Query: 213 SVRGVTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNK 272
S + T+ G+ A+ G LK L+L + + +GL IA GC LE++++ I +
Sbjct: 303 SFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTR 362
Query: 273 GLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXX 332
G+ AI + CP + L + C +IGN LQ + + C L+ + + DC +GD +
Sbjct: 363 GIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKG 422
Query: 333 XXXXXRVKLQS-LNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVS 391
++ ++ I + + IG + K+LT L L V + +G LQ+L
Sbjct: 423 CRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQL-- 480
Query: 392 FTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNR 451
V+ C ++DA I A+ +GC L + + + D L + L+ L L C+
Sbjct: 481 -NVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHH 539
Query: 452 VTQSGIIGAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSL 511
+T +G+ ++ C+ L + + CPG S+ +
Sbjct: 540 ITDNGL----------------------------NHLVQKCKLLETCHMVYCPGITSAGV 571
Query: 512 AMIGKLCPQLQHV 524
A + CP ++ V
Sbjct: 572 ATVVSSCPHIKKV 584
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 448 ECNRVTQSGIIGAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFG 507
E + +T +G+ A++N + ++L+++ C V + S+ C +L+SL +Q C G
Sbjct: 123 ESSSLTDTGLT-ALANGFPRIENLSLIWCPNVSSVGL-CSLAQKCTSLKSLDLQGCY-VG 179
Query: 508 SSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTL 567
LA +GK C QL+ ++L G+TD G++ L+ C L + + +TD + +
Sbjct: 180 DQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAV 239
Query: 568 ARLHGGTLELLNLDGCWRITDASLVAIADNCLLLNDLDVSKCAITDAGLA 617
H LE+L LD + I D L+A+A C L +L + ++TD A
Sbjct: 240 GS-HCKLLEVLYLDSEY-IHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFA 287
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 205/469 (43%), Gaps = 69/469 (14%)
Query: 202 GLGKLSIRGSNSVRGVTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLE-K 260
G+ L++ S +VR GL +A C +L+ + + + GD + ++ + E K
Sbjct: 96 GIKSLNLSRSTAVRAR---GLETLARMCHALERVDVSHCWGFGDREAAALSSATGLRELK 152
Query: 261 LDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIK---- 316
+D CLS +S+ GL I GC N+ ++++ C +I + G+ + + C L+S+ +
Sbjct: 153 MDKCLS--LSDVGLARIVVGCSNLNKISLKWCMEISDLGIDLLCKICKGLKSLDVSYLKI 210
Query: 317 --------------------DCPLVGDHGVXXXXXXXXXXXRV---KLQSLNITDFSLAV 353
CPL+ D G+ V + ++++ V
Sbjct: 211 TNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSLSGLISIV 270
Query: 354 IGHYGKAL---THLV----------LSGLQNVTERGFWVMGV----------AQGLQKLV 390
GH L +H V + GL+++ + W+ G + + L+
Sbjct: 271 RGHPDIQLLKASHCVSEVSGSFLKYIKGLKHL--KTIWIDGAHVSDSSLVSLSSSCRSLM 328
Query: 391 SFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECN 450
++ C VTD + ++ + C NLK ++L C FV+D + A A++ L +L+LE C+
Sbjct: 329 EIGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCH 388
Query: 451 RVTQSGI--IGAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGS 508
+T+ G+ +G S + + L + C GV D + +S C L+ L + C
Sbjct: 389 LITEKGLQSLGCYSML---VQELDLTDCYGVN--DRGLEYISKCSNLQRLKLGLCTNISD 443
Query: 509 SSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLA 568
+ IG C +L +DL G D GL L C++ L ++ L+ C LTD V +
Sbjct: 444 KGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKS-LNRLILSYCCELTDTGVEQIR 502
Query: 569 RLHGGTLELLNLDGCWRITDASLVAIADNCLLLNDLDVSKCA-ITDAGL 616
+L L L L G IT L AIA C L LDV C I D+G
Sbjct: 503 QLE--LLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKLCENIDDSGF 549
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 127/274 (46%), Gaps = 40/274 (14%)
Query: 186 TDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGCPSL--KSLSLWNVSSI 243
TDV ++A+A G L KL S +T GL ++ GC S+ + L L + +
Sbjct: 365 TDVAISAVAQSCRNLGTL-KL-----ESCHLITEKGLQSL--GCYSMLVQELDLTDCYGV 416
Query: 244 GDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAV 303
D GL I+K C L++L L L + IS+KG+ I C + L++ C+ G++GL A+
Sbjct: 417 NDRGLEYISK-CSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAAL 475
Query: 304 ARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGKALTH 363
+R C L + + C + D GV +++ L + L+H
Sbjct: 476 SRGCKSLNRLILSYCCELTDTGVE------------QIRQLEL--------------LSH 509
Query: 364 LVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKC 423
L L GL+N+T G + +A G +KL V C + D+ A+ NL+Q++L C
Sbjct: 510 LELRGLKNIT--GVGLAAIASGCKKLGYLDVKLCENIDDSGFWALAYFSKNLRQINLCNC 567
Query: 424 CFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGI 457
VSD+ L ++ + L +RVT G
Sbjct: 568 -SVSDTALCMLMSNLSRVQDVDLVHLSRVTVEGF 600
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 129/302 (42%), Gaps = 32/302 (10%)
Query: 243 IGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQA 302
+ D G+ +A+ C L+ L+L +++ + A+A+ C N+ TL +ESC I +GLQ+
Sbjct: 338 VTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGLQS 397
Query: 303 VARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGKALT 362
+ + +Q + + DC V D G+ L
Sbjct: 398 LGCYSMLVQELDLTDCYGVNDRGLEYISKCSN--------------------------LQ 431
Query: 363 HLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRK 422
L L N++++G + +G KL+ + C G D + A+ +GC +L ++ L
Sbjct: 432 RLKLGLCTNISDKGIFHIG--SKCSKLLELDLYRCAGFGDDGLAALSRGCKSLNRLILSY 489
Query: 423 CCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIVKCMGVKEI 482
CC ++D+G V + L L+L +T G+ S K K L + C + +
Sbjct: 490 CCELTDTG-VEQIRQLELLSHLELRGLKNITGVGLAAIASGCK-KLGYLDVKLCENIDD- 546
Query: 483 DADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLLE 542
++ + LR + + NC ++L M+ ++Q VDL L +T G L
Sbjct: 547 SGFWALAYFSKNLRQINLCNCS-VSDTALCMLMSNLSRVQDVDLVHLSRVTVEGFEFALR 605
Query: 543 NC 544
C
Sbjct: 606 AC 607
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 178/421 (42%), Gaps = 38/421 (9%)
Query: 114 EVLPDECLFEIFRRLPSSKERSSCACVSKKWLMLMSSICK---AEIEDVEMRSSXXXXXX 170
E L D+ L + RL S K++ V K+WL L S+ K A +R
Sbjct: 8 EALTDDELRWVLSRLDSDKDKEVFGLVCKRWLNLQSTDRKKLAARAGPHMLRRLASRFTQ 67
Query: 171 XXXXYLTRSLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGCP 230
L++S+ V + +AV + G L L++ ++ +G+T+ GL+++
Sbjct: 68 IVELDLSQSISRSFYPGVTDSDLAVISEGFKFLRVLNL---HNCKGITDTGLASIGRCLS 124
Query: 231 SLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIE 290
L+ L + + D+GLS +A+GCH L L L I+++ L +++E C ++ L ++
Sbjct: 125 LLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQ 184
Query: 291 SCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRV--KLQSLNITD 348
C+ I + GL + + C K++S+ I C VGD GV + L + +
Sbjct: 185 GCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGN 244
Query: 349 FSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAM 408
S++ + + K L L++ G CR ++D SI +
Sbjct: 245 ESISSLAQFCKNLETLIIGG----------------------------CRDISDESIMLL 276
Query: 409 GKGCTN-LKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSK 467
C + LK + + C +SDS L K LE+L + C VT + S+
Sbjct: 277 ADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLG 336
Query: 468 FKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLT 527
K L + C + + +L C +L + +++ P + G P+ V+ +
Sbjct: 337 LKVLKVSNCTKIT-VTGIGKLLDKCSSLEYIDVRSLPHVTEVRCSEAGLEFPKCCKVNFS 395
Query: 528 G 528
G
Sbjct: 396 G 396
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 130/274 (47%), Gaps = 35/274 (12%)
Query: 346 ITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASI 405
+TD LAVI K L L L + +T+ G +G + L L V+ CR ++D +
Sbjct: 85 VTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIG--RCLSLLQFLDVSYCRKLSDKGL 142
Query: 406 EAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIK 465
A+ +GC +L+ + L C F++D L + ++ LE+L L+ C +T SG+ + +
Sbjct: 143 SAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCR 202
Query: 466 SKFKSLTIVKCMGVKEIDADVSMLSPC--ETLRSLVIQNCPGFGSSSLAMIGKLCPQLQH 523
K KSL I KC V DA VS ++ +L++L + +C G+ S++ + + C L+
Sbjct: 203 -KIKSLDINKCSNVG--DAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLET 259
Query: 524 VDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGGTLELLNLDGC 583
+ + G I+D ++ L ++C+ +L+ L +D C
Sbjct: 260 LIIGGCRDISDESIMLLADSCK---------------------------DSLKNLRMDWC 292
Query: 584 WRITDASLVAIADNCLLLNDLDVSKC-AITDAGL 616
I+D+SL I C L LD+ C +TD
Sbjct: 293 LNISDSSLSCILKQCKNLEALDIGCCEEVTDTAF 326
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 128/262 (48%), Gaps = 5/262 (1%)
Query: 346 ITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASI 405
ITD LA IG L L +S + ++++G VA+G L + + CR +TD S+
Sbjct: 111 ITDTGLASIGRCLSLLQFLDVSYCRKLSDKGL--SAVAEGCHDLRALHLAGCRFITDESL 168
Query: 406 EAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIK 465
+++ + C +L+ + L+ C ++DSGL K ++SL + +C+ V +G+
Sbjct: 169 KSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACA 228
Query: 466 SKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQ-LQHV 524
S K+L ++ C V ++ S+ C+ L +L+I C S+ ++ C L+++
Sbjct: 229 SSLKTLKLLDCYKVGN-ESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNL 287
Query: 525 DLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGGTLELLNLDGCW 584
+ I+D+ L +L+ C+ L +++ C +TD L L++L + C
Sbjct: 288 RMDWCLNISDSSLSCILKQCK-NLEALDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCT 346
Query: 585 RITDASLVAIADNCLLLNDLDV 606
+IT + + D C L +DV
Sbjct: 347 KITVTGIGKLLDKCSSLEYIDV 368
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Query: 483 DADVSMLSP-CETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLL 541
D+D++++S + LR L + NC G + LA IG+ LQ +D++ ++D GL +
Sbjct: 87 DSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVA 146
Query: 542 ENCEAGLVKVNLTGCWNLTDNVVSTLARLHGGTLELLNLDGCWRITDASLVAIADNCLLL 601
E C L ++L GC +TD + +L+ LE L L GC ITD+ L + C +
Sbjct: 147 EGCH-DLRALHLAGCRFITDESLKSLSE-RCRDLEALGLQGCTNITDSGLADLVKGCRKI 204
Query: 602 NDLDVSKCA-ITDAGLAVXXXXXXXXXXXXXXXXCCDLSNKSVAFLTKLGQTLLGLNLQH 660
LD++KC+ + DAG++ C + N+S++ L + + L L +
Sbjct: 205 KSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGG 264
Query: 661 CSSIGSSTIELLVEN 675
C I +I LL ++
Sbjct: 265 CRDISDESIMLLADS 279
>AT5G01720.1 | Symbols: | RNI-like superfamily protein |
chr5:267118-270391 REVERSE LENGTH=665
Length = 665
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 196/475 (41%), Gaps = 82/475 (17%)
Query: 217 VTNLGLSAVAHGC---PSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKG 273
VT+ LS V GC P+L+SL L S GL ++A C L ++DL ++T
Sbjct: 85 VTDYALSVV--GCLSGPTLRSLDLSRSGSFSAAGLLRLALKCVNLVEIDLS-NATEMRDA 141
Query: 274 LIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXX 333
A+ ++ L + C + + G+ +A C KL ++S+K C VGD GV
Sbjct: 142 DAAVVAEARSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGVGDLGVGLLAVKC 201
Query: 334 XXXXRVKLQSLNIT-------------------------DFSLAVIGHYGKALTHLVLSG 368
+ L L IT D SL + H K+L L S
Sbjct: 202 KDIRTLDLSYLPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASS 261
Query: 369 LQNVTERGFW---------------------VMGVAQGLQKLVSFTVTSCRG--VTDASI 405
QN+T RG + A L+K+ + G VT +
Sbjct: 262 CQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLDGCSVTPDGL 321
Query: 406 EAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISN-- 463
+A+G C +LK++SL KC V+D GL + L L + C ++++ I I+N
Sbjct: 322 KAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSIT-QIANSC 380
Query: 464 ---IKSKFKSLTIV----------KCMGVKEIDADVSMLSPCETLRSLVIQN-------- 502
+ K +S ++V KC ++E+D + + +
Sbjct: 381 PLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLKSISSCLSLSSLKLGI 440
Query: 503 CPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDN 562
C L+ IG C L+ +DL GITD G+ + + C L +N++ C ++TD
Sbjct: 441 CLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGC-IHLETINISYCQDITDK 499
Query: 563 VVSTLARLHGGTLELLNLDGCWRITDASLVAIADNCLLLNDLDVSKC-AITDAGL 616
+ +L++ L+ GC IT L AIA C L +D+ KC +I DAGL
Sbjct: 500 SLVSLSKC--SLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGL 552
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 5/257 (1%)
Query: 217 VTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIA 276
VT GL A+ C SLK +SL S+ DEGLS + L KLD+ +S +
Sbjct: 316 VTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQ 375
Query: 277 IAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXX 336
IA CP + +L +ESCS + E + + C L+ + + D + D G+
Sbjct: 376 IANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTDNE-IDDEGLKSISSCLSLS 434
Query: 337 XRVKLQSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTS 396
LNITD L+ IG L L L +T+ G + +AQG L + ++
Sbjct: 435 SLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGITDVG--ISTIAQGCIHLETINISY 492
Query: 397 CRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSG 456
C+ +TD S+ ++ K C+ L+ R C ++ GL A A L + L++C + +G
Sbjct: 493 CQDITDKSLVSLSK-CSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAG 551
Query: 457 IIGAISNIKSKFKSLTI 473
++ A+++ K + +
Sbjct: 552 LL-ALAHFSQNLKQINV 567
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 158/363 (43%), Gaps = 46/363 (12%)
Query: 198 SGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHM 257
SG G L +L + +SV +L ++ +L+S+ L + S+ +GL I C+
Sbjct: 275 SGAGYLQRLDLSHCSSV---ISLDFASSLKKVSALQSIRL-DGCSVTPDGLKAIGTLCNS 330
Query: 258 LEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKD 317
L+++ L +++++GL ++ ++ L+I C K+ + +A CP L S+ ++
Sbjct: 331 LKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMES 390
Query: 318 CPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGKALTHLVLSGLQ----NVT 373
C LV L+ L++TD + G + + S N+T
Sbjct: 391 CSLVSREAFWLIGQKCRL-----LEELDLTDNEIDDEGLKSISSCLSLSSLKLGICLNIT 445
Query: 374 ERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVA 433
++G +G+ G L + G+TD I + +GC +L+ +++ C ++D LV+
Sbjct: 446 DKGLSYIGM--GCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKSLVS 503
Query: 434 FAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCE 493
+K + L++ + C +T G + AI+ V+C + ++D
Sbjct: 504 LSKCS-LLQTFESRGCPNITSQG-LAAIA-----------VRCKRLAKVD---------- 540
Query: 494 TLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLLE-NCEAGLVKVN 552
++ CP + L + L+ ++++ +T+ GLL L C + VN
Sbjct: 541 ------LKKCPSINDAGLLALAHFSQNLKQINVSD-TAVTEVGLLSLANIGCLQNIAVVN 593
Query: 553 LTG 555
+G
Sbjct: 594 SSG 596
>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 40/277 (14%)
Query: 243 IGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQA 302
+ D + IA CH L+ LDL SS I++ L ++A GC N+T LN+ C+ + L
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAH 163
Query: 303 VARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGKALT 362
+ RFC KL+ +++ C ++D +L IG L
Sbjct: 164 LTRFCRKLKILNLCGCVEA------------------------VSDNTLQAIGENCNQLQ 199
Query: 363 HLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRK 422
L L +N+++ G VM +A G L + + SC +TD S+ A+ C +L+ + L
Sbjct: 200 SLNLGWCENISDDG--VMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYY 257
Query: 423 CCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIVKCM----- 477
C ++D + + A++ E R + G + +SL I +C
Sbjct: 258 CRNITDRAMYSLAQSGVK----NKHEMWRAVKKGKFD-----EEGLRSLNISQCTYLTPS 308
Query: 478 GVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMI 514
V+ + L C SLV+ C S A I
Sbjct: 309 AVQAVCDTFPALHTCSGRHSLVMSGCLNLQSVHCACI 345
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 181 EGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGCPSLKSLSLWN- 239
+ K TD L ++A G + L KL++ G S ++ L+ + C LK L+L
Sbjct: 126 KSSKITDHSLYSLARGCTN---LTKLNLSGCTSF---SDTALAHLTRFCRKLKILNLCGC 179
Query: 240 VSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEG 299
V ++ D L I + C+ L+ L+L IS+ G++++A GCP++ TL++ SC I +E
Sbjct: 180 VEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDES 239
Query: 300 LQAVARFCPKLQSISIKDCPLVGDHGV 326
+ A+A C L+S+ + C + D +
Sbjct: 240 VVALANRCIHLRSLGLYYCRNITDRAM 266
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 12/225 (5%)
Query: 221 GLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEG 280
+ A+A+ C L+ L L S I D L +A+GC L KL+L ++ S+ L +
Sbjct: 108 AVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRF 167
Query: 281 CPNMTTLNIESC-SKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRV 339
C + LN+ C + + LQA+ C +LQS+++ C + D GV +
Sbjct: 168 CRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTL 227
Query: 340 KLQS-LNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCR 398
L S + ITD S+ + + L L L +N+T+R + + Q V R
Sbjct: 228 DLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLA-----QSGVKNKHEMWR 282
Query: 399 GVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLES 443
V + G L+ +++ +C +++ S + A L +
Sbjct: 283 AVKKGKFDEEG-----LRSLNISQCTYLTPSAVQAVCDTFPALHT 322
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 18/250 (7%)
Query: 294 KIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQS-LNITDFSLA 352
++ + ++A+A C +LQ + + + DH + ++ L + +D +LA
Sbjct: 103 QLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALA 162
Query: 353 VIGHYGKALTHLVLSG-LQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKG 411
+ + + L L L G ++ V++ +G + +L S + C ++D + ++ G
Sbjct: 163 HLTRFCRKLKILNLCGCVEAVSDNTLQAIG--ENCNQLQSLNLGWCENISDDGVMSLAYG 220
Query: 412 CTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIG-AISNIKSKFKS 470
C +L+ + L C ++D +VA A L SL L C +T + A S +K+K +
Sbjct: 221 CPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEM 280
Query: 471 LTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLY 530
VK E E LRSL I C S++ + P L +G +
Sbjct: 281 WRAVKKGKFDE-----------EGLRSLNISQCTYLTPSAVQAVCDTFPALH--TCSGRH 327
Query: 531 GITDAGLLPL 540
+ +G L L
Sbjct: 328 SLVMSGCLNL 337
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 7/205 (3%)
Query: 415 LKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIV 474
L ++SL C +S +++ A L++L L + + + AI+N + + L +
Sbjct: 66 LTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLS 125
Query: 475 KCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTG-LYGIT 533
K + + + S+ C L L + C F ++LA + + C +L+ ++L G + ++
Sbjct: 126 KSSKITD-HSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVS 184
Query: 534 DAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHG-GTLELLNLDGCWRITDASLV 592
D L + ENC L +NL C N++D+ V +LA +G L L+L C ITD S+V
Sbjct: 185 DNTLQAIGENCNQ-LQSLNLGWCENISDDGVMSLA--YGCPDLRTLDLCSCVLITDESVV 241
Query: 593 AIADNCLLLNDLDVSKCA-ITDAGL 616
A+A+ C+ L L + C ITD +
Sbjct: 242 ALANRCIHLRSLGLYYCRNITDRAM 266
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%)
Query: 214 VRGVTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKG 273
V V++ L A+ C L+SL+L +I D+G+ +A GC L LDLC I+++
Sbjct: 180 VEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDES 239
Query: 274 LIAIAEGCPNMTTLNIESCSKIGNEGLQAVAR 305
++A+A C ++ +L + C I + + ++A+
Sbjct: 240 VVALANRCIHLRSLGLYYCRNITDRAMYSLAQ 271
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
protein | chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 40/277 (14%)
Query: 243 IGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQA 302
+ D + IA CH L+ LDL SS I++ L ++A GC N+T LN+ C+ + L
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAH 163
Query: 303 VARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGKALT 362
+ RFC KL+ +++ C ++D +L IG L
Sbjct: 164 LTRFCRKLKILNLCGCVEA------------------------VSDNTLQAIGENCNQLQ 199
Query: 363 HLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRK 422
L L +N+++ G VM +A G L + + SC +TD S+ A+ C +L+ + L
Sbjct: 200 SLNLGWCENISDDG--VMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYY 257
Query: 423 CCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIVKCM----- 477
C ++D + + A++ E R + G + +SL I +C
Sbjct: 258 CRNITDRAMYSLAQSGVK----NKHEMWRAVKKGKFD-----EEGLRSLNISQCTYLTPS 308
Query: 478 GVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMI 514
V+ + L C SLV+ C S A I
Sbjct: 309 AVQAVCDTFPALHTCSGRHSLVMSGCLNLQSVHCACI 345
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 181 EGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGCPSLKSLSLWN- 239
+ K TD L ++A G + L KL++ G S ++ L+ + C LK L+L
Sbjct: 126 KSSKITDHSLYSLARGCTN---LTKLNLSGCTSF---SDTALAHLTRFCRKLKILNLCGC 179
Query: 240 VSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEG 299
V ++ D L I + C+ L+ L+L IS+ G++++A GCP++ TL++ SC I +E
Sbjct: 180 VEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDES 239
Query: 300 LQAVARFCPKLQSISIKDCPLVGDHGV 326
+ A+A C L+S+ + C + D +
Sbjct: 240 VVALANRCIHLRSLGLYYCRNITDRAM 266
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 12/225 (5%)
Query: 221 GLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEG 280
+ A+A+ C L+ L L S I D L +A+GC L KL+L ++ S+ L +
Sbjct: 108 AVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRF 167
Query: 281 CPNMTTLNIESC-SKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRV 339
C + LN+ C + + LQA+ C +LQS+++ C + D GV +
Sbjct: 168 CRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTL 227
Query: 340 KLQS-LNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCR 398
L S + ITD S+ + + L L L +N+T+R + + Q V R
Sbjct: 228 DLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLA-----QSGVKNKHEMWR 282
Query: 399 GVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLES 443
V + G L+ +++ +C +++ S + A L +
Sbjct: 283 AVKKGKFDEEG-----LRSLNISQCTYLTPSAVQAVCDTFPALHT 322
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 18/250 (7%)
Query: 294 KIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQS-LNITDFSLA 352
++ + ++A+A C +LQ + + + DH + ++ L + +D +LA
Sbjct: 103 QLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALA 162
Query: 353 VIGHYGKALTHLVLSG-LQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKG 411
+ + + L L L G ++ V++ +G + +L S + C ++D + ++ G
Sbjct: 163 HLTRFCRKLKILNLCGCVEAVSDNTLQAIG--ENCNQLQSLNLGWCENISDDGVMSLAYG 220
Query: 412 CTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIG-AISNIKSKFKS 470
C +L+ + L C ++D +VA A L SL L C +T + A S +K+K +
Sbjct: 221 CPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEM 280
Query: 471 LTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLY 530
VK E E LRSL I C S++ + P L +G +
Sbjct: 281 WRAVKKGKFDE-----------EGLRSLNISQCTYLTPSAVQAVCDTFPALH--TCSGRH 327
Query: 531 GITDAGLLPL 540
+ +G L L
Sbjct: 328 SLVMSGCLNL 337
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 7/205 (3%)
Query: 415 LKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIV 474
L ++SL C +S +++ A L++L L + + + AI+N + + L +
Sbjct: 66 LTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLS 125
Query: 475 KCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTG-LYGIT 533
K + + + S+ C L L + C F ++LA + + C +L+ ++L G + ++
Sbjct: 126 KSSKITD-HSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVS 184
Query: 534 DAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHG-GTLELLNLDGCWRITDASLV 592
D L + ENC L +NL C N++D+ V +LA +G L L+L C ITD S+V
Sbjct: 185 DNTLQAIGENCNQ-LQSLNLGWCENISDDGVMSLA--YGCPDLRTLDLCSCVLITDESVV 241
Query: 593 AIADNCLLLNDLDVSKCA-ITDAGL 616
A+A+ C+ L L + C ITD +
Sbjct: 242 ALANRCIHLRSLGLYYCRNITDRAM 266
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%)
Query: 214 VRGVTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKG 273
V V++ L A+ C L+SL+L +I D+G+ +A GC L LDLC I+++
Sbjct: 180 VEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDES 239
Query: 274 LIAIAEGCPNMTTLNIESCSKIGNEGLQAVAR 305
++A+A C ++ +L + C I + + ++A+
Sbjct: 240 VVALANRCIHLRSLGLYYCRNITDRAMYSLAQ 271
>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
chr1:7497479-7499386 FORWARD LENGTH=360
Length = 360
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 245 DEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVA 304
D + IA CH L++LDL S I+++ L A+A GCP++T LN+ C+ + + +
Sbjct: 106 DNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLT 165
Query: 305 RFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGKALTHL 364
RFC KL+ +++ C VK +TD +L IG+ + L
Sbjct: 166 RFCRKLKVLNLCGC--------------------VKA----VTDNALEAIGNNCNQMQSL 201
Query: 365 VLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCC 424
L +N+++ G VM +A G L + + C +TD S+ A+ C +L+ + L C
Sbjct: 202 NLGWCENISDDG--VMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCR 259
Query: 425 FVSDSGLVAFAKA 437
++D + + A++
Sbjct: 260 NITDRAMYSLAQS 272
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 10/221 (4%)
Query: 399 GVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGII 458
GV +A+ G T L+ L C +S +++ L++L L + + +
Sbjct: 53 GVCTGWRDAISFGLTRLR---LSWCNNNMNSLVLSLVPKFVKLQTLNLRQDKPQLEDNAV 109
Query: 459 GAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLC 518
AI+N + + L + K + + + + ++ C L L + C F +++A + + C
Sbjct: 110 EAIANHCHELQELDLSKSLKITD-RSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFC 168
Query: 519 PQLQHVDLTG-LYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHG-GTLE 576
+L+ ++L G + +TD L + NC + +NL C N++D+ V +LA +G L
Sbjct: 169 RKLKVLNLCGCVKAVTDNALEAIGNNCNQ-MQSLNLGWCENISDDGVMSLA--YGCPDLR 225
Query: 577 LLNLDGCWRITDASLVAIADNCLLLNDLDVSKCA-ITDAGL 616
L+L GC ITD S+VA+AD C+ L L + C ITD +
Sbjct: 226 TLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAM 266
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 11/218 (5%)
Query: 379 VMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAA 438
V +A +L ++ +TD S+ A+ GC +L +++L C SD+ + +
Sbjct: 109 VEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFC 168
Query: 439 GTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLRSL 498
L+ L L C + + AI N ++ +SL + C + + D +S+ C LR+L
Sbjct: 169 RKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISD-DGVMSLAYGCPDLRTL 227
Query: 499 VIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWN 558
+ C S+ + C L+ + L ITD + L ++G+ N G W
Sbjct: 228 DLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSL---AQSGV--KNKPGSWK 282
Query: 559 LTDNVVSTLARLHGGTLELLNLDGCWRITDASLVAIAD 596
+ L LN+ C +T +++ A+ D
Sbjct: 283 SVKK-----GKYDEEGLRSLNISQCTALTPSAVQAVCD 315
>AT3G58530.1 | Symbols: | RNI-like superfamily protein |
chr3:21645759-21648219 FORWARD LENGTH=353
Length = 353
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 18/245 (7%)
Query: 215 RGVTNLGLSAVAHGCP----SLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTIS 270
+GV + L V CP SL+ L+L I D G+ I C L+ + + ++
Sbjct: 92 QGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVT 151
Query: 271 NKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXX 330
+ G+ + + C ++T LN+ C + ++ +Q VA P L+S++I C + D G+
Sbjct: 152 DAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVL 211
Query: 331 XXXXXXXRVKLQSLNITDFSLAVIGHYGKA-----LTHLVLSGLQNVTERGFWVMGVAQG 385
LQ+LN+ S Y K L L + G QN+++ G +G
Sbjct: 212 QKC-----FSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDEG---IGHIAK 263
Query: 386 LQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKA-AGTLESL 444
KL S +T C +TDA + + CT+L+ +SL V+D L ++ + TL +L
Sbjct: 264 CNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLETLSQTCSTTLTTL 323
Query: 445 QLEEC 449
+ C
Sbjct: 324 DVNGC 328
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 7/224 (3%)
Query: 360 ALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMS 419
+L L L+ Q +++ G + + KL F++ VTDA I + K C ++ ++
Sbjct: 112 SLEWLNLNVCQKISDNG--IEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLN 169
Query: 420 LRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIVKCMGV 479
L C ++D + A++ LESL + C ++T G++ + S ++L + G
Sbjct: 170 LSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVLQKCFS-LQTLNLYALSGF 228
Query: 480 KEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLP 539
D +S LR L I + I K C +L+ ++LT ITDAG+
Sbjct: 229 T--DKAYMKISLLADLRFLDICGAQNISDEGIGHIAK-CNKLESLNLTWCVRITDAGVNT 285
Query: 540 LLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGGTLELLNLDGC 583
+ +C L ++L G +TD + TL++ TL L+++GC
Sbjct: 286 IANSC-TSLEFLSLFGIVGVTDRCLETLSQTCSTTLTTLDVNGC 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 398 RGVTDASIEAMGKGCTN----LKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVT 453
+GV D+ ++ + C + L+ ++L C +SD+G+ A L+ + RVT
Sbjct: 92 QGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVT 151
Query: 454 QSGIIGAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCET---LRSLVIQNCPGFGSSS 510
+GI + N + +T + G K + D SM E+ L SL I C
Sbjct: 152 DAGIRNLVKNCRH----ITDLNLSGCKSL-TDKSMQLVAESYPDLESLNITRCVKITDDG 206
Query: 511 LAMIGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARL 570
L + + C LQ ++L L G TD + + + A L +++ G N++D + +A+
Sbjct: 207 LLQVLQKCFSLQTLNLYALSGFTDKAYMKI--SLLADLRFLDICGAQNISDEGIGHIAKC 264
Query: 571 HGGTLELLNLDGCWRITDASLVAIADNC 598
+ LE LNL C RITDA + IA++C
Sbjct: 265 NK--LESLNLTWCVRITDAGVNTIANSC 290
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 132/294 (44%), Gaps = 11/294 (3%)
Query: 234 SLSLWNVSSIGDEGLSQIA-KGCHMLEKLDLCLSSTISNKGLIAIAEGCPN----MTTLN 288
+++L +++ GD L+ ++ ++ ++L + + + L + CP+ + LN
Sbjct: 58 TINLREMTNAGDRLLAALSLPRYRQVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLN 117
Query: 289 IESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSL-NIT 347
+ C KI + G++A+ CPKL+ SI V D G+ + L ++T
Sbjct: 118 LNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLT 177
Query: 348 DFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEA 407
D S+ ++ L L ++ +T+ G + V Q L + + + G TD +
Sbjct: 178 DKSMQLVAESYPDLESLNITRCVKITDDGL--LQVLQKCFSLQTLNLYALSGFTDKAYMK 235
Query: 408 MGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSK 467
+ +L+ + + +SD G+ AK LESL L C R+T +G+ I+N +
Sbjct: 236 ISL-LADLRFLDICGAQNISDEGIGHIAKC-NKLESLNLTWCVRITDAGV-NTIANSCTS 292
Query: 468 FKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQL 521
+ L++ +GV + + + TL +L + C G S + ++ P+L
Sbjct: 293 LEFLSLFGIVGVTDRCLETLSQTCSTTLTTLDVNGCTGIKRRSREELLQMFPRL 346
>AT3G07550.2 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 145/366 (39%), Gaps = 42/366 (11%)
Query: 116 LPDECLFEIFRRLPSSKERSSCACVSKKWLMLMSSICKAEIEDVEMRSSXXXXXXXXXXY 175
LPD+CL IF+RL S + S +WL I+++ RS
Sbjct: 18 LPDDCLSFIFQRLDSVADHDSFGLTCHRWL---------NIQNISRRS---LQFQCSFSV 65
Query: 176 LTRSLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGS--------NSVR------------ 215
L S + DV + + L LS+ G +S+R
Sbjct: 66 LNPSSLSQTNPDVSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLD 125
Query: 216 ---GVTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNK 272
G+++ G+S +A CP+L +SL+ + I D GL +A+ L+ ++L +S+
Sbjct: 126 CCFGISDDGISTIASFCPNLSVVSLYRCN-ISDIGLETLARASLSLKCVNLSYCPLVSDF 184
Query: 273 GLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXX 332
G+ A+++ C + ++ I +C I G + P L + C L
Sbjct: 185 GIKALSQACLQLESVKISNCKSITGVGFSGCS---PTLGYVDADSCQLEPKGITGIISGG 241
Query: 333 XXXXXRVKLQSLNITDFSLAVIGH-YGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVS 391
+ S I L IG L L L + V + + +A+G L
Sbjct: 242 GIEFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDES--IEAIAKGCPLLQE 299
Query: 392 FTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNR 451
+ + C V + EA+GK C NLK++ + +C + D GL+A L+ L + R
Sbjct: 300 WNLALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNAR 359
Query: 452 VTQSGI 457
+T + I
Sbjct: 360 LTPTAI 365
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 117/272 (43%), Gaps = 36/272 (13%)
Query: 346 ITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASI 405
+ D SL + + G L L L +++ G + +A L ++ C ++D +
Sbjct: 104 LNDSSLDSLRYPGARLHTLYLDCCFGISDDG--ISTIASFCPNLSVVSLYRC-NISDIGL 160
Query: 406 EAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNI- 464
E + + +LK ++L C VSD G+ A ++A LES+++ C +T G G +
Sbjct: 161 ETLARASLSLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSITGVGFSGCSPTLG 220
Query: 465 ---------------------KSKFKSLTIVKCM----GVKEIDADVSMLSPCETLRSLV 499
+F +++ V C G+ I + ++ LR L
Sbjct: 221 YVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIA-----SKLRILN 275
Query: 500 IQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNL 559
++ C G S+ I K CP LQ +L + + +G + + C L K+++ C NL
Sbjct: 276 LRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCR-NLKKLHVNRCRNL 334
Query: 560 TDNVVSTLARLHGGTLELLNLDGCWRITDASL 591
D + L R L++L ++G R+T ++
Sbjct: 335 CDQGLLAL-RCGCMNLQILYMNGNARLTPTAI 365
>AT3G07550.1 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 145/366 (39%), Gaps = 42/366 (11%)
Query: 116 LPDECLFEIFRRLPSSKERSSCACVSKKWLMLMSSICKAEIEDVEMRSSXXXXXXXXXXY 175
LPD+CL IF+RL S + S +WL I+++ RS
Sbjct: 18 LPDDCLSFIFQRLDSVADHDSFGLTCHRWL---------NIQNISRRS---LQFQCSFSV 65
Query: 176 LTRSLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGS--------NSVR------------ 215
L S + DV + + L LS+ G +S+R
Sbjct: 66 LNPSSLSQTNPDVSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLD 125
Query: 216 ---GVTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNK 272
G+++ G+S +A CP+L +SL+ + I D GL +A+ L+ ++L +S+
Sbjct: 126 CCFGISDDGISTIASFCPNLSVVSLYRCN-ISDIGLETLARASLSLKCVNLSYCPLVSDF 184
Query: 273 GLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXX 332
G+ A+++ C + ++ I +C I G + P L + C L
Sbjct: 185 GIKALSQACLQLESVKISNCKSITGVGFSGCS---PTLGYVDADSCQLEPKGITGIISGG 241
Query: 333 XXXXXRVKLQSLNITDFSLAVIGH-YGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVS 391
+ S I L IG L L L + V + + +A+G L
Sbjct: 242 GIEFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDES--IEAIAKGCPLLQE 299
Query: 392 FTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNR 451
+ + C V + EA+GK C NLK++ + +C + D GL+A L+ L + R
Sbjct: 300 WNLALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNAR 359
Query: 452 VTQSGI 457
+T + I
Sbjct: 360 LTPTAI 365
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 117/272 (43%), Gaps = 36/272 (13%)
Query: 346 ITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASI 405
+ D SL + + G L L L +++ G + +A L ++ C ++D +
Sbjct: 104 LNDSSLDSLRYPGARLHTLYLDCCFGISDDG--ISTIASFCPNLSVVSLYRC-NISDIGL 160
Query: 406 EAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNI- 464
E + + +LK ++L C VSD G+ A ++A LES+++ C +T G G +
Sbjct: 161 ETLARASLSLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSITGVGFSGCSPTLG 220
Query: 465 ---------------------KSKFKSLTIVKCM----GVKEIDADVSMLSPCETLRSLV 499
+F +++ V C G+ I + ++ LR L
Sbjct: 221 YVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIA-----SKLRILN 275
Query: 500 IQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNL 559
++ C G S+ I K CP LQ +L + + +G + + C L K+++ C NL
Sbjct: 276 LRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCR-NLKKLHVNRCRNL 334
Query: 560 TDNVVSTLARLHGGTLELLNLDGCWRITDASL 591
D + L R L++L ++G R+T ++
Sbjct: 335 CDQGLLAL-RCGCMNLQILYMNGNARLTPTAI 365
>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
chr1:17276103-17277659 REVERSE LENGTH=518
Length = 518
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 146/331 (44%), Gaps = 39/331 (11%)
Query: 242 SIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQ 301
SIGDE L +I+ C L++L L +++ G+ A AE C ++ + SC G +G++
Sbjct: 116 SIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSCD-FGAKGVK 174
Query: 302 AVARFCPKLQSISIKD-------CPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVI 354
AV C L+ +SIK P + GV + N F ++
Sbjct: 175 AVLDHCSNLEELSIKRLRGFTDIAPEMIGPGVAASSLKSICLKEL----YNGQCFGPVIV 230
Query: 355 GHYG-KALTHLVLSG-----LQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAM 408
G K+L SG LQ ++ + V+ + L+++ V+D ++ A+
Sbjct: 231 GAKNLKSLKLFRCSGDWDLLLQEMSGKDHGVVEIH--LERM---------QVSDVALSAI 279
Query: 409 GKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLE--ECNRVTQSGIIGAISNIKS 466
C++L+ + L K ++ GL A A+ L L ++ + N + G++ A++ S
Sbjct: 280 SY-CSSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLV-AVAKFCS 337
Query: 467 KFKSLTIVKCMGVKEIDADVSML-SPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVD 525
+ + L ++ GV + ML + C L L + C FG L+ I CP L+ +
Sbjct: 338 QLQELVLI---GVNPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLC 394
Query: 526 LTGLYGITDAGLLPLLENCEAGLVKVNLTGC 556
+ I+D G+ L C GL KV + C
Sbjct: 395 IKNC-PISDVGIENLANGC-PGLTKVKIKKC 423
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 180 LEGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGCPSLKSLSL-- 237
LE + +DV L+AI+ +S L L + + TN GL+A+A C L+ L +
Sbjct: 266 LERMQVSDVALSAISYCSS----LESLHLVKTPEC---TNFGLAAIAEKCKRLRKLHIDG 318
Query: 238 WNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGN 297
W + IGDEGL +AK C L++L L + + L +A C N+ L + C G+
Sbjct: 319 WKANLIGDEGLVAVAKFCSQLQELVL-IGVNPTTLSLGMLAAKCLNLERLALCGCDTFGD 377
Query: 298 EGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQ 342
L +A CP L+ + IK+CP + D G+ +VK++
Sbjct: 378 PELSCIAAKCPALRKLCIKNCP-ISDVGIENLANGCPGLTKVKIK 421
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 132/302 (43%), Gaps = 36/302 (11%)
Query: 342 QSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVT 401
+S++I D +L I + L L L + +T+ G + A+ + L F+ SC
Sbjct: 113 RSVSIGDEALVKISLRCRNLKRLKLRACRELTDVG--MAAFAENCKDLKIFSCGSC-DFG 169
Query: 402 DASIEAMGKGCTNLKQMSLRKCCFVSD--SGLVAFAKAAGTLESLQLEECNRVTQSGIIG 459
++A+ C+NL+++S+++ +D ++ AA +L+S+ L+E + G
Sbjct: 170 AKGVKAVLDHCSNLEELSIKRLRGFTDIAPEMIGPGVAASSLKSICLKE---LYNGQCFG 226
Query: 460 AISNIKSKFKSLTIVKC---------------MGVKEI--------DADVSMLSPCETLR 496
+ KSL + +C GV EI D +S +S C +L
Sbjct: 227 PVIVGAKNLKSLKLFRCSGDWDLLLQEMSGKDHGVVEIHLERMQVSDVALSAISYCSSLE 286
Query: 497 SLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYG--ITDAGLLPLLENCEAGLVKVNLT 554
SL + P + LA I + C +L+ + + G I D GL+ + + C + L ++ L
Sbjct: 287 SLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFC-SQLQELVLI 345
Query: 555 GCWNLTDNVVSTLARLHGGTLELLNLDGCWRITDASLVAIADNCLLLNDLDVSKCAITDA 614
G T ++ A+ LE L L GC D L IA C L L + C I+D
Sbjct: 346 GVNPTTLSLGMLAAKCL--NLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISDV 403
Query: 615 GL 616
G+
Sbjct: 404 GI 405
>AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 |
chr1:4368879-4370780 REVERSE LENGTH=577
Length = 577
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 237 LWNVSSIGDEGLSQIAKGCHMLEKLDLCLS---------STISNKGLIAIAEGCPNMTTL 287
LW + SIGD+GL+ +A C L++L + S ++++ GL+AI+ GCP + ++
Sbjct: 315 LWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNASVTEVGLVAISAGCPKLHSI 374
Query: 288 NIESCSKIGNEGLQAVARFCPKLQSISIKDC---PLVGDHGVXXXXXXXXXXXRVKLQSL 344
+ C ++ N L AVA+ CP I + C P DH + QSL
Sbjct: 375 -LYFCKQMTNAALIAVAKNCPNF--IRFRLCILEPHKPDH--------------ITFQSL 417
Query: 345 NITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDAS 404
D I K L L +SGL +T++ F +G+ +++S G TD
Sbjct: 418 ---DEGFGAIVQACKGLRRLSVSGL--LTDQVFLYIGMYAEQLEMLSIAFA---GDTDKG 469
Query: 405 IEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEEC 449
+ + GC ++++ +R F ++ L+A T+ SL + C
Sbjct: 470 MLYVLNGCKKMRKLEIRDSPF-GNAALLADVGRYETMRSLWMSSC 513
>AT4G33210.1 | Symbols: SLOMO | F-box family protein |
chr4:16015971-16020697 REVERSE LENGTH=990
Length = 990
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 167/411 (40%), Gaps = 92/411 (22%)
Query: 229 CPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLN 288
CP L+SLSL +SQ C +L+ LD+ + + + + A CP + +L+
Sbjct: 348 CPQLRSLSL------KRSNMSQAMLNCPLLQLLDIASCHKLLDAAIRSAAISCPQLESLD 401
Query: 289 IESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLN-IT 347
+ +CS + +E L+ +A+ C L ++ CP + V +KL S IT
Sbjct: 402 VSNCSCVSDETLREIAQACANLHILNASYCPNISLESVHLPMLTV-----LKLHSCEGIT 456
Query: 348 DFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEA 407
S+ I + AL L L +T V+ L +L S ++ CR TD ++++
Sbjct: 457 SASMTWIAN-SPALEVLELDNCNLLT-------TVSLHLSRLQSISLVHCRKFTDLNLQS 508
Query: 408 MGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSK 467
+ L +++ C L + L L L++ +T
Sbjct: 509 IM-----LSSITVSNC-----PALRRITITSNALRRLALQKQENLTT------------- 545
Query: 468 FKSLTIVKCMGVKEID-ADVSMLSP-----------CETLRSLVIQNCPG-----FGSSS 510
+++C ++E+D +D LS C L+SL++ NC F +SS
Sbjct: 546 ----LVLQCHSLQEVDLSDCESLSNSVCKIFSDDGGCPMLKSLILDNCESLTAVRFCNSS 601
Query: 511 LAMIGKL-----------CPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNL 559
LA + + CP+++ + L G + A P+ L +NL C L
Sbjct: 602 LASLSLVGCRAVTSLELKCPRIEQICLDGCDHLETAFFQPV------ALRSLNLGICPKL 655
Query: 560 TDNVVSTLARLHGGTLELLNLDGCWRITDASLVAIADNCLLLNDLDVSKCA 610
++ + + L L GC +++AS++ C LL LD S C+
Sbjct: 656 ------SVLNIEAPYMVSLELKGCGVLSEASIM-----CPLLTSLDASFCS 695
>AT2G17020.1 | Symbols: | F-box/RNI-like superfamily protein |
chr2:7396559-7398787 REVERSE LENGTH=656
Length = 656
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 30/273 (10%)
Query: 208 IRGSNSVRGVTNLGLSAVAHGCPSLKSLSLWN--------VSSIGDEGLSQIAKGCHMLE 259
+ V +T+ GL + LK LSL + D+G+ +A C +E
Sbjct: 271 LEDPRQVSDLTDFGLHEINQN-GKLKHLSLIRSQEFHPTYFRRVSDQGMLFLADKCLGME 329
Query: 260 KLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCP 319
+ L +++ G I C +++ +I K+ + + L +S++ C
Sbjct: 330 TICLGGFCRVTDAGFKTILHSCASLSKFSIYHGPKLTDLVFHDILATTLSLSHVSLRRCH 389
Query: 320 LVGDHGVXXXXXXXXXXXRVKLQSL------NITDFSLAVIGHYGKALTHLVLSGLQNVT 373
L+ DH + +KL++L N+ D +L + H K L L+L G +++
Sbjct: 390 LLTDHAIQKLASS------LKLENLDLRGCRNLRDETLTAVSHLPK-LKVLLLDG-ADIS 441
Query: 374 ERGFWVM--GVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNL--KQMSLRKCCFVSDS 429
+ G + GV L LVS +V CR +TD + + G + L +++ L ++D+
Sbjct: 442 DTGLSYLKEGV---LDSLVSLSVRGCRNLTDKFMSTLFDGSSKLALRELDLSNLPNLTDA 498
Query: 430 GLVAFAKAAGTLESLQLEECNRVTQSGIIGAIS 462
+ A AK+ + LQL EC + + ++ S
Sbjct: 499 AIFALAKSGAPITKLQLRECRLIGDASVMALAS 531
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 132/321 (41%), Gaps = 50/321 (15%)
Query: 295 IGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVI 354
I + ++A+++ P L + I+D PL V ++TDF L I
Sbjct: 246 ITDAVVKAISKSLPSLIDLDIRDAPLEDPRQVS-----------------DLTDFGLHEI 288
Query: 355 GHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTN 414
GK L HL L Q F T R V+D + + C
Sbjct: 289 NQNGK-LKHLSLIRSQE--------------------FHPTYFRRVSDQGMLFLADKCLG 327
Query: 415 LKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIV 474
++ + L C V+D+G + +L + ++T + I +++
Sbjct: 328 METICLGGFCRVTDAGFKTILHSCASLSKFSIYHGPKLTDL-VFHDILATTLSLSHVSLR 386
Query: 475 KCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITD 534
+C + D + L+ L +L ++ C +L + L P+L+ + L G I+D
Sbjct: 387 RCHLL--TDHAIQKLASSLKLENLDLRGCRNLRDETLTAVSHL-PKLKVLLLDG-ADISD 442
Query: 535 AGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTL----ARLHGGTLELLNLDGCWRITDAS 590
GL L E LV +++ GC NLTD +STL ++L L+L NL +TDA+
Sbjct: 443 TGLSYLKEGVLDSLVSLSVRGCRNLTDKFMSTLFDGSSKLALRELDLSNLPN---LTDAA 499
Query: 591 LVAIADNCLLLNDLDVSKCAI 611
+ A+A + + L + +C +
Sbjct: 500 IFALAKSGAPITKLQLRECRL 520
>AT1G80630.1 | Symbols: | RNI-like superfamily protein |
chr1:30308879-30310615 REVERSE LENGTH=578
Length = 578
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 158/418 (37%), Gaps = 56/418 (13%)
Query: 231 SLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCL----SSTISNKGLIAIAEGCPNMTT 286
++K L + V D L I +LEKLD+ S +S+ G+I ++ +
Sbjct: 108 NVKELKCYGVGGFSDSDLVSIGVNFPLLEKLDISYPNSSPSRVSDSGVIELSSNLKGLLK 167
Query: 287 LNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNI 346
+NI S I ++ L A+++ C L+ I +DC + + L+SL I
Sbjct: 168 INISGNSFITDKSLIALSQNCLLLREIIFRDCDFISSDCIKFVLRNSR-----NLESLAI 222
Query: 347 TDFSLAVIGH-------YGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRG 399
L + + LT L LS + + +A L ++ C G
Sbjct: 223 NGIGLRPRESLLTDAFLFARCLTELDLS--DSFLSDDLLCL-IASAKLPLKKLLLSDCHG 279
Query: 400 VTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIG 459
T I + +L ++L+ F+SD ++ L L L C+++T
Sbjct: 280 FTFDGILYLLDKYQSLVHLNLKGANFLSDEMVMKLGMFFRRLTFLNLSFCSKLTGLAFFS 339
Query: 460 AISNIKSKFKSLTIVKCMGVKEIDADVSMLSP------------------------CETL 495
I S + + GV+E D C +
Sbjct: 340 IIERCVSLRCMIMVGTNFGVEEYTKDTKDFKSGVKFLYLSRNHNLLDECLEKISRHCPFI 399
Query: 496 RSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGL----LPLLENCEAGLVKV 551
SL + CPG + + + C +L+ +D++ GI G+ LP LE+ A
Sbjct: 400 ESLDVAQCPGITRDGILEVWRNCGKLRSLDISRCTGIKSLGVVDFELPKLESLRA----- 454
Query: 552 NLTGCWNLTDNVVSTLARLHGGTLELLNLDGCWRITDASLVAIADNCLLLNDLDVSKC 609
G W + D + +++ G L L+L GC ++ + + +C+ L ++++ C
Sbjct: 455 --CGTW-IDDEALDMISKKCRGLLH-LDLQGCLNVSSRGVKEVVQSCIRLREINLKYC 508
>AT4G30640.1 | Symbols: | RNI-like superfamily protein |
chr4:14952670-14953682 FORWARD LENGTH=301
Length = 301
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 117/326 (35%), Gaps = 83/326 (25%)
Query: 111 PGIEVLPDECLFEIFRRLPSSKERSSCACVSKKWLMLMSSICKAEIEDVEMRSSXXXXXX 170
P L ECL +IF RL + VSK W+ I D+E R
Sbjct: 18 PDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETR---FLSFP 74
Query: 171 XXXXYLTRSLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGCP 230
+ T E K + +R +V GGL ++ IR T LS A CP
Sbjct: 75 ESINWWTPEFEDKVDSFLR----SVVDRSEGGLTEIRIRH------CTERSLSYAAERCP 124
Query: 231 SLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIE 290
+L+ L + N ++ D + +IA C L +LD+ S I+++ LI + C N+ L
Sbjct: 125 NLEVLWIKNCPNVTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRN 184
Query: 291 SCSKIGNEGLQAVARFCPKLQSI-----SIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLN 345
++G P L +I + P G
Sbjct: 185 LLPRLG-----------PSLPTIVAPLDYLATFPRYG----------------------- 210
Query: 346 ITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASI 405
+ +IG Y L HL + ++ + RG +
Sbjct: 211 --NIEARIIGKYMTQLKHLE------------------------IRYSTLTARG-----L 239
Query: 406 EAMGKGCTNLKQMSLRKCCFVSDSGL 431
+++ KGC+NL+ M LR C ++ S +
Sbjct: 240 DSVCKGCSNLEYMDLRGCISLTRSDI 265
>AT2G06040.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-rich
repeat, cysteine-containing subtype
(InterPro:IPR006553); BEST Arabidopsis thaliana protein
match is: RNI-like superfamily protein
(TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins
in 240 species: Archae - 0; Bacteria - 125; Metazoa -
2326; Fungi - 765; Plants - 1373; Viruses - 0; Other
Eukaryotes - 439 (source: NCBI BLink). |
chr2:2352333-2355419 REVERSE LENGTH=762
Length = 762
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 7/216 (3%)
Query: 396 SCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGT-LESLQLEECNRVTQ 454
+CR ++D + + + ++L +C ++ S + + + G+ L L + EC +
Sbjct: 493 ACR-LSDVGLRQLVSSAPAITSINLNQCSLLTSSSIDMLSDSLGSVLRELYINECQNIDM 551
Query: 455 SGIIGAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMI 514
I+ A+ + K + L++ VK + + +TL+ L++ N SS+ +I
Sbjct: 552 KHILAALKKFE-KLEVLSLADLPSVKGRFLKEFVTARGQTLKQLILTNSRKLSDSSIKVI 610
Query: 515 GKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWN-LTDNVVSTLARLHGG 573
+ CP L +DL + +TD+ L L C+A L K L C N +D V+ GG
Sbjct: 611 SENCPNLSVLDLANVCKLTDSSLGYLANGCQA-LEK--LIFCRNPFSDEAVAAFVETAGG 667
Query: 574 TLELLNLDGCWRITDASLVAIADNCLLLNDLDVSKC 609
+L+ L+L+ ++ + +A+A + L LD+S C
Sbjct: 668 SLKELSLNNVKKVGHNTALALAKHSDKLQILDISWC 703
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 215 RGVTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGL 274
R +++ + ++ CP+L L L NV + D L +A GC LEKL C + S++ +
Sbjct: 600 RKLSDSSIKVISENCPNLSVLDLANVCKLTDSSLGYLANGCQALEKLIFC-RNPFSDEAV 658
Query: 275 IAIAEGC-PNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDC 318
A E ++ L++ + K+G+ A+A+ KLQ + I C
Sbjct: 659 AAFVETAGGSLKELSLNNVKKVGHNTALALAKHSDKLQILDISWC 703
>AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 |
chr4:4197847-4199511 REVERSE LENGTH=554
Length = 554
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 28/135 (20%)
Query: 218 TNLGLSAVAHGCPSLKSLSL--WNVSSIGDEGLSQIAK---------------------- 253
TN+GL+ VA C L+ L + W + IGDEGL +AK
Sbjct: 330 TNVGLALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVLIGVNPTKLSLEA 389
Query: 254 ---GCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKL 310
C LE+L LC S T+ + L IAE C + L I++C I ++G++A+ CP L
Sbjct: 390 IVSNCLNLERLALCGSDTVGDTELCCIAEKCLALRKLCIKNCP-ITDDGIKALGNGCPNL 448
Query: 311 QSISIKDCPLVGDHG 325
+ +K C V G
Sbjct: 449 LKVKVKKCRGVTTQG 463
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 131/306 (42%), Gaps = 37/306 (12%)
Query: 338 RVKLQSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSC 397
R +SL I D + +I + LT L L G +++ G ++G + + L + SC
Sbjct: 143 RSDRRSLGICDNAFVMISVRCRNLTRLKLRGCPEISDLG--IIGFTENCRSLKKVSFGSC 200
Query: 398 RGVTDASIEAMGKGCTNLKQMSLRKCCFV-SDSGLVAFAKAAGTLESLQLEE-----CNR 451
G + A+ C L+++S+++ + + + L+ AAG+L+ + L+E C
Sbjct: 201 -GFGVKGMNALLNTCLGLEELSVKRLRGIGAGAELIGPGGAAGSLKVICLKELHNGQCFA 259
Query: 452 VTQSGIIG---------------AISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLR 496
SG G ++ K ++ + ++ D ++ LS C +
Sbjct: 260 PLLSGAKGLRILKIFRCSGDWDRVFEAVRDKVNAIVEIHLERIQMSDLGLTALSKCSGVE 319
Query: 497 SLVIQNCPGFGSSSLAMIGKLCPQLQ--HVDLTGLYGITDAGLLPLLENC----EAGLVK 550
L + P + LA++ + C L+ H+D I D GL+ + + C E L+
Sbjct: 320 VLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVLIG 379
Query: 551 VNLTGCWNLTDNVVSTLARLHGGTLELLNLDGCWRITDASLVAIADNCLLLNDLDVSKCA 610
VN T +L V + L LE L L G + D L IA+ CL L L + C
Sbjct: 380 VNPTK-LSLEAIVSNCL------NLERLALCGSDTVGDTELCCIAEKCLALRKLCIKNCP 432
Query: 611 ITDAGL 616
ITD G+
Sbjct: 433 ITDDGI 438
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 32/191 (16%)
Query: 242 SIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIE--SCSKIGNEG 299
+ D GL+ ++K C +E L L + +N GL +AE C + L+I+ ++IG+EG
Sbjct: 303 QMSDLGLTALSK-CSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDEG 361
Query: 300 LQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGK 359
L VA++C LQ + L+G +N T SL I
Sbjct: 362 LIVVAKYCWNLQELV-----LIG---------------------VNPTKLSLEAIVSNCL 395
Query: 360 ALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMS 419
L L L G V + +A+ L + +C +TD I+A+G GC NL ++
Sbjct: 396 NLERLALCGSDTVGDTELCC--IAEKCLALRKLCIKNC-PITDDGIKALGNGCPNLLKVK 452
Query: 420 LRKCCFVSDSG 430
++KC V+ G
Sbjct: 453 VKKCRGVTTQG 463
>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting protein
2 | chr5:26831677-26833260 REVERSE LENGTH=527
Length = 527
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 218 TNLGLSAVAHGCPSLKSLSL--WNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLI 275
+N GL VA C L+ L + W + IGDEGL +AK C L++L L + ++ L
Sbjct: 301 SNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQELVL-IGVNATHMSLA 359
Query: 276 AIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGV 326
AIA C + L + IG+ + +AR C L+ IK CP V D G+
Sbjct: 360 AIASNCEKLERLALCGSGTIGDTEIACIARKCGALRKFCIKGCP-VSDRGI 409
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 176/437 (40%), Gaps = 74/437 (16%)
Query: 116 LPDECLFEIFRRLPSSKERSSCACVSKKWLMLMSSICKAEIEDVEMRSSXXXXXXXXXXY 175
LPDECL +F+ L + +R C+ V K+WL++ D + R
Sbjct: 46 LPDECLAHVFQFLGAG-DRKRCSLVCKRWLLV----------DGQSRHRL---------- 84
Query: 176 LTRSLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGCPSLKSL 235
SL+ K L ++ N VT L L KS+
Sbjct: 85 ---SLDAKDEISSFLTSMF-----------------NRFDSVTKLALRC------DRKSV 118
Query: 236 SLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKI 295
SL DE L+ I+ C L ++ L I++ G+ A+ C N+ L++ SC+
Sbjct: 119 SL------SDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSCN-F 171
Query: 296 GNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIG 355
G +G+ A+ C L+ +S+K L G H L+S+ + + V G
Sbjct: 172 GAKGVNAMLEHCKLLEELSVK--RLRGIHEAAELIHLPDDASSSSLRSICLKEL---VNG 226
Query: 356 HYGKAL--THLVLSGLQNVTERGFW---VMGVAQGLQKLVSFTVTSCRGVTDASIEAMGK 410
+ L T L L+ + G W + +A G L + + V+D + A+ K
Sbjct: 227 QVFEPLLATTRTLKTLKIIRCLGDWDKVLQMIANGKSSLSEIHLERLQ-VSDIGLSAISK 285
Query: 411 GCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLE--ECNRVTQSGIIGAISNIKSKF 468
C+N++ + + K S+ GL+ A+ L L ++ NR+ G++ ++
Sbjct: 286 -CSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLL----SVAKHC 340
Query: 469 KSLTIVKCMGVKEIDADVSML-SPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLT 527
+L + +GV ++ + S CE L L + G + +A I + C L+ +
Sbjct: 341 LNLQELVLIGVNATHMSLAAIASNCEKLERLALCGSGTIGDTEIACIARKCGALRKFCIK 400
Query: 528 GLYGITDAGLLPLLENC 544
G ++D G+ L C
Sbjct: 401 GCP-VSDRGIEALAVGC 416
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 55/279 (19%)
Query: 389 LVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEE 448
L + CR +TD +E K C NLK++S+ C F + G+ A + LE L ++
Sbjct: 135 LTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSCNFGA-KGVNAMLEHCKLLEELSVKR 193
Query: 449 CNRVTQSGII------GAISNIKS--------------------KFKSLTIVKCMG---- 478
+ ++ + + S+++S K+L I++C+G
Sbjct: 194 LRGIHEAAELIHLPDDASSSSLRSICLKELVNGQVFEPLLATTRTLKTLKIIRCLGDWDK 253
Query: 479 -----------VKEI--------DADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCP 519
+ EI D +S +S C + +L I P + L + + C
Sbjct: 254 VLQMIANGKSSLSEIHLERLQVSDIGLSAISKCSNVETLHIVKTPECSNFGLIYVAERCK 313
Query: 520 QLQ--HVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGGTLEL 577
L+ H+D I D GLL + ++C L ++ L G N T ++ +A + LE
Sbjct: 314 LLRKLHIDGWRTNRIGDEGLLSVAKHC-LNLQELVLIGV-NATHMSLAAIAS-NCEKLER 370
Query: 578 LNLDGCWRITDASLVAIADNCLLLNDLDVSKCAITDAGL 616
L L G I D + IA C L + C ++D G+
Sbjct: 371 LALCGSGTIGDTEIACIARKCGALRKFCIKGCPVSDRGI 409
>AT5G51370.2 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20874192 FORWARD LENGTH=446
Length = 446
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 114/254 (44%), Gaps = 24/254 (9%)
Query: 178 RSLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRG-----VTNLGLSAVAHGCPSL 232
+ LE K D L IA + +G +R SV G V+++GL+ +A GC SL
Sbjct: 177 QELELHKCNDNLLHGIAACKNLKG------LRLVGSVDGLYSSSVSDIGLTFLAQGCRSL 230
Query: 233 KSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESC 292
L L D G+ I + C +LE+L +C + G IA ++ L I SC
Sbjct: 231 VKLELSGCEGSFD-GIKAIGQCCEVLEELSICDHRM--DDGWIAALSYFESLKILRISSC 287
Query: 293 SKI-GNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQS-LNITD-- 348
KI + G + + R CP ++S+ +K C L G+ V +Q ++D
Sbjct: 288 RKIDASPGPEKLLRSCPAMESLQLKRCCLNDKEGIKALFKVCDGATEVNIQDCWGLSDDC 347
Query: 349 FSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIE-A 407
FSLA + + L L G +T G + V ++L S V SC+ + D+ I A
Sbjct: 348 FSLA---KAFRRVRFLSLEGCSVLTSGG--LESVILHWEELESMRVVSCKSIKDSEISPA 402
Query: 408 MGKGCTNLKQMSLR 421
+ + LK+++ R
Sbjct: 403 LSSLFSLLKELTWR 416
>AT5G07670.1 | Symbols: | RNI-like superfamily protein |
chr5:2430421-2432065 FORWARD LENGTH=476
Length = 476
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 217 VTNLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIA 276
V+++GL +A GC L L L G +G+ +I + C MLE+L +C + S G +
Sbjct: 249 VSDIGLMILAQGCKRLVKLELVGCEG-GFDGIKEIGECCQMLEELTVCDNKMES--GWLG 305
Query: 277 IAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXX 336
C N+ TL + SC KI N+ ++++ CP L+ + ++ C L + V
Sbjct: 306 GLRYCENLKTLKLVSCKKIDNDPDESLSCCCPALERLQLEKCQLRDKNTVKALFKMCEAA 365
Query: 337 XRVKLQS---LNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFT 393
+ Q L+ FSLA+ +G+ + L L G +T G + V +L
Sbjct: 366 REIVFQDCWGLDNDIFSLAMA--FGR-VKLLYLEGCSLLTTSG--LESVILHWHELEHLK 420
Query: 394 VTSCRGVTDASI 405
V SC+ + D+ +
Sbjct: 421 VVSCKNIKDSEV 432
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 100/477 (20%), Positives = 179/477 (37%), Gaps = 139/477 (29%)
Query: 72 SSPMDLGRLYTISSNVDSYYPSTKRARVSAPFIFETLQKPGIEVLPDECLFEIFRRLPSS 131
SSP+DL ++ S P +++ P TL +LPD L + +++P+S
Sbjct: 35 SSPLDL------AAKFQSLTPPISKSKTLLPDF--TL------LLPDLILIRVIQKIPNS 80
Query: 132 KERSSCACVSKKWLMLMSSICKA-EIEDVEMRSSXXXXXXXXXXYLTRSLEGKKATDVRL 190
+R + + V K+W L + ++ ++ D E SS + G + L
Sbjct: 81 -QRKNLSLVCKRWFRLHGRLVRSFKVSDWEFLSSGRLISRFPNLETVDLVSGCLISPPNL 139
Query: 191 A-----AIAVGTSGRGGLGKLSIRGSN--SVRGVTNLGLSAVAHGCPSLKSLSLWNVSSI 243
I T G G S N SV V GL A+A GC +L+ L + N S +
Sbjct: 140 GILVNHRIVSFTVGVGSYQSWSFFEENLLSVELVER-GLKALAGGCSNLRKLVVTNTSEL 198
Query: 244 GDEGLSQIAKGCHMLEKLDL----------------------------CLSSTISNKGLI 275
GL +A+ C L++L+L +S +S+ GL+
Sbjct: 199 ---GLLNVAEECSRLQELELHKCSDSVLLGIGAFENLQILRLVGNVDGLYNSLVSDIGLM 255
Query: 276 AIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXX 335
+A+GC + L + C G +G++ + C L+ +++ D
Sbjct: 256 ILAQGCKRLVKLELVGCEG-GFDGIKEIGECCQMLEELTVCD------------------ 296
Query: 336 XXRVKLQSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVT 395
N E G+ +G + + L + +
Sbjct: 297 -----------------------------------NKMESGW--LGGLRYCENLKTLKLV 319
Query: 396 SCRGVTDASIEAMGKGCTNLKQMSLRKC-------------------------CFVSDSG 430
SC+ + + E++ C L+++ L KC C+ D+
Sbjct: 320 SCKKIDNDPDESLSCCCPALERLQLEKCQLRDKNTVKALFKMCEAAREIVFQDCWGLDND 379
Query: 431 LVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIVKCMGVKEIDADVS 487
+ + A A G ++ L LE C+ +T SG+ I + + + L +V C +K D++VS
Sbjct: 380 IFSLAMAFGRVKLLYLEGCSLLTTSGLESVILHWH-ELEHLKVVSCKNIK--DSEVS 433
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 132/316 (41%), Gaps = 64/316 (20%)
Query: 265 LSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDH 324
LS + +GL A+A GC N+ L + + S++G L VA C +LQ + + C
Sbjct: 168 LSVELVERGLKALAGGCSNLRKLVVTNTSELG---LLNVAEECSRLQELELHKC------ 218
Query: 325 GVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGK-ALTHLV--LSGLQNVTERGFWVMG 381
+D L IG + + LV + GL N +M
Sbjct: 219 ----------------------SDSVLLGIGAFENLQILRLVGNVDGLYNSLVSDIGLMI 256
Query: 382 VAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTL 441
+AQG ++LV + C G D I+ +G+ C L+++++ C +SG + + L
Sbjct: 257 LAQGCKRLVKLELVGCEGGFDG-IKEIGECCQMLEELTV--CDNKMESGWLGGLRYCENL 313
Query: 442 ESLQLEECNRVTQSGIIGAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQ 501
++L+L C ++ ++S + L + KC +++ + ++ CE R +V Q
Sbjct: 314 KTLKLVSCKKIDNDPD-ESLSCCCPALERLQLEKCQ-LRDKNTVKALFKMCEAAREIVFQ 371
Query: 502 NCPGFGSS--SLAM-IGKL----------------------CPQLQHVDLTGLYGITDAG 536
+C G + SLAM G++ +L+H+ + I D+
Sbjct: 372 DCWGLDNDIFSLAMAFGRVKLLYLEGCSLLTTSGLESVILHWHELEHLKVVSCKNIKDSE 431
Query: 537 LLPLLENCEAGLVKVN 552
+ P L + LV++
Sbjct: 432 VSPSLSALFSALVELQ 447
>AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 |
chr3:9868342-9870464 FORWARD LENGTH=575
Length = 575
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 219 NLGLSAVAHGCPSLKSLS-------LWNVSSIGDEGLSQIAKGCHMLEKLDLCLS----- 266
NL +A HG +K + LW + SIGD+GL +A C L++L + S
Sbjct: 290 NLSYAAEIHGSHLIKLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLGG 349
Query: 267 --STISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDC---PLV 321
+ ++ +GL+AI+ GCP + ++ + C ++ N L VA+ CP I + C P
Sbjct: 350 GNTAVTEEGLVAISAGCPKLHSI-LYFCQQMTNAALVTVAKNCPNF--IRFRLCILEPNK 406
Query: 322 GDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMG 381
DH V Q L D I K+L LS +T++ F +G
Sbjct: 407 PDH--------------VTSQPL---DEGFGAIVKACKSLR--RLSLSGLLTDQVFLYIG 447
Query: 382 VAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTL 441
+ +++S G TD + + GC +K++ +R F D+ L+A T+
Sbjct: 448 MYANQLEMLSIAFA---GDTDKGMLYVLNGCKKMKKLEIRDSPF-GDTALLADVSKYETM 503
Query: 442 ESLQLEECNRVTQSG 456
SL + C VT SG
Sbjct: 504 RSLWMSSC-EVTLSG 517
>AT5G21900.1 | Symbols: | RNI-like superfamily protein |
chr5:7238239-7240338 FORWARD LENGTH=544
Length = 544
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 33/243 (13%)
Query: 398 RGVTDASIEAMGKGCTN----LKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVT 453
R +TD +I K N L +SL+ ++D+ L+ +K++ L+ + L EC+ +T
Sbjct: 236 RSMTDYTINQFFKRAPNGFPSLTTLSLQGAFCLTDNALLLISKSSPLLQYINLTECSLLT 295
Query: 454 QSGIIGAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVI------------- 500
+ S + L+I C G+K+ S L E L L +
Sbjct: 296 YRALRILADKFGSTLRGLSIGGCQGIKKHKGFSSSLYKFEKLNYLSVAGLVSVNDGVVRS 355
Query: 501 --------------QNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPLLENCEA 546
NC + IG+ C +L+ +D+T L +TD L + E C
Sbjct: 356 FFMFRSSILTDLSLANCNEVTDECMWHIGRYCKKLEALDITDLDKLTDKSLEFITEGCRY 415
Query: 547 GLVKVNLTGCWNLTDNVVSTLARLHGGTLELLNLDGCWRITDASLVAIADNCLLLNDLDV 606
L + LT +D ++ + GG+L L L+ + + ++A C +L LD+
Sbjct: 416 -LKSLKLTSN-RFSDECIAAFLEVSGGSLRELCLNKVRDVGPETAFSLAKVCKMLQFLDL 473
Query: 607 SKC 609
S C
Sbjct: 474 SWC 476
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 131/327 (40%), Gaps = 38/327 (11%)
Query: 261 LDLC---LSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKD 317
LDLC ++ N+ G P++TTL+++ + + L +++ P LQ I++ +
Sbjct: 231 LDLCGRSMTDYTINQFFKRAPNGFPSLTTLSLQGAFCLTDNALLLISKSSPLLQYINLTE 290
Query: 318 CPLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIG------HYG--------KALTH 363
C L+ + R+ T L++ G H G + L +
Sbjct: 291 CSLLTYRAL-----------RILADKFGSTLRGLSIGGCQGIKKHKGFSSSLYKFEKLNY 339
Query: 364 LVLSGLQNVTE---RGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSL 420
L ++GL +V + R F++ + L ++ +C VTD + +G+ C L+ + +
Sbjct: 340 LSVAGLVSVNDGVVRSFFMFRSSI----LTDLSLANCNEVTDECMWHIGRYCKKLEALDI 395
Query: 421 RKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLTIVKCMGVK 480
++D L + L+SL+L NR + I + + L + K V
Sbjct: 396 TDLDKLTDKSLEFITEGCRYLKSLKLTS-NRFSDECIAAFLEVSGGSLRELCLNKVRDVG 454
Query: 481 EIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQHVDLTGLYGITDAGLLPL 540
A S+ C+ L+ L + C L I + C LQ + L G + D L
Sbjct: 455 PETA-FSLAKVCKMLQFLDLSWCRRLKEDDLRRILRCCSSLQSLKLFGWTQVEDT-YLEE 512
Query: 541 LENCEAGLVKVNLTGCWNLTDNVVSTL 567
L + + + LT + DN ++
Sbjct: 513 LSRSDVHITGLKLTSLYAHLDNFYPSV 539
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 129/321 (40%), Gaps = 36/321 (11%)
Query: 219 NLGLSAVAHGCPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIA 278
N +G PSL +LSL + D L I+K +L+ ++L S ++ + L +A
Sbjct: 244 NQFFKRAPNGFPSLTTLSLQGAFCLTDNALLLISKSSPLLQYINLTECSLLTYRALRILA 303
Query: 279 EGC-PNMTTLNIESCSKI-GNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXX 336
+ + L+I C I ++G + KL +S+ V D V
Sbjct: 304 DKFGSTLRGLSIGGCQGIKKHKGFSSSLYKFEKLNYLSVAGLVSVNDGVVR--------- 354
Query: 337 XRVKLQSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTS 396
+ LT L L+ VT+ W +G + +KL + +T
Sbjct: 355 ---------------SFFMFRSSILTDLSLANCNEVTDECMWHIG--RYCKKLEALDITD 397
Query: 397 CRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAA-GTLESLQLEECNRVTQS 455
+TD S+E + +GC LK + L F SD + AF + + G+L L L N+V
Sbjct: 398 LDKLTDKSLEFITEGCRYLKSLKLTSNRF-SDECIAAFLEVSGGSLRELCL---NKVRDV 453
Query: 456 GIIGAISNIK--SKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAM 513
G A S K + L + C +KE D +L C +L+SL + + L
Sbjct: 454 GPETAFSLAKVCKMLQFLDLSWCRRLKEDDL-RRILRCCSSLQSLKLFGWTQVEDTYLEE 512
Query: 514 IGKLCPQLQHVDLTGLYGITD 534
+ + + + LT LY D
Sbjct: 513 LSRSDVHITGLKLTSLYAHLD 533
>AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 |
chr3:18572788-18574356 FORWARD LENGTH=522
Length = 522
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 78/166 (46%), Gaps = 31/166 (18%)
Query: 186 TDVRLAAIAVGTSGRGGLGKLS-IRGSNSVR--GVTNLGLSAVAHGCPSLKSLSL--WNV 240
T++RL + V G G+ K S + + V+ +NLGL++V C L+ L + W V
Sbjct: 260 TEIRLERLQVTDIGLFGISKCSNLETLHIVKTPDCSNLGLASVVERCKLLRKLHIDGWRV 319
Query: 241 SSIGDEGL-------------------------SQIAKGCHMLEKLDLCLSSTISNKGLI 275
IGD+GL S IA C LE+L LC S TI + +
Sbjct: 320 KRIGDQGLMSVAKHCLNLQELVLIGVDATYMSLSAIASNCKKLERLALCGSGTIGDAEIG 379
Query: 276 AIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLV 321
IAE C + I+ C I + G+QA+A CPKL + +K C LV
Sbjct: 380 CIAEKCVTLRKFCIKGCL-ISDVGVQALALGCPKLVKLKVKKCSLV 424
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 162/393 (41%), Gaps = 45/393 (11%)
Query: 116 LPDECLFEIFRRLPSSKERSSCACVSKKWLMLMSSICKAEIEDVEMRSSXXXXXXXXXXY 175
LPD+CL IF+ L S+ +R C+ VSK+WL++ D + R
Sbjct: 44 LPDDCLAHIFQFL-SAGDRKRCSLVSKRWLLV----------DGQNRHRL---------- 82
Query: 176 LTRSLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGCPSLKSL 235
SL+ K L + + + KL++R +++ L V+ C +L +
Sbjct: 83 ---SLDAKSEI---LPFLPCIFNRFDSVTKLALRCDRRSFSLSDEALFIVSIRCSNLIRV 136
Query: 236 SLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKI 295
L I D G+ A+ C L KL C S T KG+ A+ E C + L+++ +
Sbjct: 137 KLRGCREITDLGMESFARNCKSLRKLS-CGSCTFGAKGINAMLEHCKVLEELSLKRIRGL 195
Query: 296 GNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVK-LQSLNITDFSLAVI 354
L+S+ +K+ LV V +VK ++ L D +
Sbjct: 196 HELAEPIKLSLSASLRSVFLKE--LVNGQ-VFGSLVATRTLKKVKIIRCLGNWDRVFEMN 252
Query: 355 GHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTN 414
G+ +LT + L LQ VT+ G + + L+ L C + AS+ + C
Sbjct: 253 GNGNSSLTEIRLERLQ-VTDIGLFGISKCSNLETLHIVKTPDCSNLGLASVV---ERCKL 308
Query: 415 LKQMSLR--KCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNIKSKFKSLT 472
L+++ + + + D GL++ AK L+ L L + ++S I S K L
Sbjct: 309 LRKLHIDGWRVKRIGDQGLMSVAKHCLNLQELVL-----IGVDATYMSLSAIASNCKKLE 363
Query: 473 IVKCMGVKEI-DADVSMLS-PCETLRSLVIQNC 503
+ G I DA++ ++ C TLR I+ C
Sbjct: 364 RLALCGSGTIGDAEIGCIAEKCVTLRKFCIKGC 396
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 57/278 (20%)
Query: 389 LVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEE 448
L+ + CR +TD +E+ + C +L+++S C F + G+ A + LE L L+
Sbjct: 133 LIRVKLRGCREITDLGMESFARNCKSLRKLSCGSCTFGA-KGINAMLEHCKVLEELSLKR 191
Query: 449 CN-----------------------RVTQSGIIGAISNIKSKFKSLTIVKCMG----VKE 481
+ + G++ ++ K + I++C+G V E
Sbjct: 192 IRGLHELAEPIKLSLSASLRSVFLKELVNGQVFGSLVATRT-LKKVKIIRCLGNWDRVFE 250
Query: 482 IDA-----------------DVSM--LSPCETLRSLVIQNCPGFGSSSLAMIGKLCPQLQ 522
++ D+ + +S C L +L I P + LA + + C L+
Sbjct: 251 MNGNGNSSLTEIRLERLQVTDIGLFGISKCSNLETLHIVKTPDCSNLGLASVVERCKLLR 310
Query: 523 --HVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGG--TLELL 578
H+D + I D GL+ + ++C L ++ L G D +L+ + LE L
Sbjct: 311 KLHIDGWRVKRIGDQGLMSVAKHC-LNLQELVLIG----VDATYMSLSAIASNCKKLERL 365
Query: 579 NLDGCWRITDASLVAIADNCLLLNDLDVSKCAITDAGL 616
L G I DA + IA+ C+ L + C I+D G+
Sbjct: 366 ALCGSGTIGDAEIGCIAEKCVTLRKFCIKGCLISDVGV 403
>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 |
chr4:1405108-1407057 REVERSE LENGTH=585
Length = 585
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 45/253 (17%)
Query: 216 GVTNLGLSAVAHGCPSLKSL--------SLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSS 267
G+T+L LS P L L LW + I D+GL +A C L +L + S
Sbjct: 286 GLTSLNLSYATVRMPDLVELLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSE 345
Query: 268 T--------ISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDC- 318
++ +GL+ +++GC + ++ + C + N L +AR P L+ + C
Sbjct: 346 PDLDATNIPLTEQGLVFVSKGCRKLESV-LYFCVQFTNAALFTIARKRPNLKCFRL--CV 402
Query: 319 --PLVGDHGVXXXXXXXXXXXRVKLQSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERG 376
P D+ ++ D I + L L +SGL ++++
Sbjct: 403 IEPFAPDY-----------------KTNEPLDKGFKAIAEGCRDLRRLSVSGL--LSDKA 443
Query: 377 FWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAK 436
F +G +++S G +D + + GC +LK++ +R C F D+ L+ A
Sbjct: 444 FKYIGKHAKKVRMLSIAFA---GDSDLMLHHLLSGCESLKKLEIRDCPF-GDTALLEHAA 499
Query: 437 AAGTLESLQLEEC 449
T+ SL + C
Sbjct: 500 KLETMRSLWMSSC 512
>AT1G55590.1 | Symbols: | RNI-like superfamily protein |
chr1:20769476-20771756 REVERSE LENGTH=607
Length = 607
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 37/270 (13%)
Query: 217 VTNLGLSAVAHGCPSLKSLSL----WN----VSSIGDEGLSQIAKGCHMLEKLDLCLSST 268
+T GL A+ C L SLSL +N I D G+ +++ C LE + L
Sbjct: 265 LTYTGLQALGF-CQQLTSLSLVRTCYNRKISFKRINDMGIFLLSEACKGLESVRLGGFPK 323
Query: 269 ISNKGLIAIAEGCPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXX 328
+S+ G ++ C N+ + + + V LQ + + CPL+ V
Sbjct: 324 VSDAGFASLLHSCRNLKKFEVRGAFLLSDLAFHDVTGSSCSLQEVRLSTCPLITSEAVKK 383
Query: 329 XXX-------------------XXXXXXRVKLQSLN-----ITDFSLAVIGHYGKALTHL 364
KL SLN +TD + +G +T L
Sbjct: 384 LGLCGNLEVLDLGSCKSISDSCLNSVSALRKLTSLNLAGADVTDSGMLALGKSDVPITQL 443
Query: 365 VLSGLQNVTERGFWVMGVAQGL--QKLVSFTVTSCRGVTDASIEAMGKGCTNLKQMSLRK 422
L G + V++RG + +G + L + + G++D +I + C L ++S+R
Sbjct: 444 SLRGCRRVSDRGISYLLNNEGTISKTLSTLDLGHMPGISDRAIHTITHCCKALTELSIRS 503
Query: 423 CCFVSDSGLVAFAKAAGTLE--SLQLEECN 450
C V+DS + + A E S QL + N
Sbjct: 504 CFHVTDSSIESLATWERQAEGGSKQLRKLN 533
>AT1G80570.1 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 345 NITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDAS 404
+ D L V+ +LT L LS +T+ G +G +L S + +T
Sbjct: 83 QVDDQGLLVLTTNCHSLTDLTLSFCTFITDVG---IGHLSSCPELSSLKLNFAPRITGCG 139
Query: 405 IEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNI 464
+ ++ GC L+++ L +C V+ + + TLE L ++ C + + +I + N
Sbjct: 140 VLSLAVGCKKLRRLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLI-KLRNS 198
Query: 465 KSKFKSLTI--------VKCMGVKEIDADVSMLSPCETLRSLVIQNC---PGFGSSSLAM 513
K SL +K +++ L PC++L L + NC PG G LA
Sbjct: 199 WRKLTSLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNCIIAPGRG---LAC 255
Query: 514 IGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGG 573
+ + C L+ + L G++D+ ++ L++ + L ++L V S
Sbjct: 256 VLRNCKNLEKLHLDMCTGVSDSDIIALVQK-ASHLRSISL--------RVPSDF------ 300
Query: 574 TLELLNLDGCWRITDASLVAIADNCLLLNDLDVS 607
TL LLN + R+TD SL AIA +C L +S
Sbjct: 301 TLPLLN-NITLRLTDESLSAIAQHCSKLESFKIS 333
>AT1G80570.3 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 345 NITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDAS 404
+ D L V+ +LT L LS +T+ G +G +L S + +T
Sbjct: 83 QVDDQGLLVLTTNCHSLTDLTLSFCTFITDVG---IGHLSSCPELSSLKLNFAPRITGCG 139
Query: 405 IEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNI 464
+ ++ GC L+++ L +C V+ + + TLE L ++ C + + +I + N
Sbjct: 140 VLSLAVGCKKLRRLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLI-KLRNS 198
Query: 465 KSKFKSLTI--------VKCMGVKEIDADVSMLSPCETLRSLVIQNC---PGFGSSSLAM 513
K SL +K +++ L PC++L L + NC PG G LA
Sbjct: 199 WRKLTSLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNCIIAPGRG---LAC 255
Query: 514 IGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGG 573
+ + C L+ + L G++D+ ++ L++ + L ++L V S
Sbjct: 256 VLRNCKNLEKLHLDMCTGVSDSDIIALVQK-ASHLRSISL--------RVPSDF------ 300
Query: 574 TLELLNLDGCWRITDASLVAIADNCLLLNDLDVS 607
TL LLN + R+TD SL AIA +C L +S
Sbjct: 301 TLPLLN-NITLRLTDESLSAIAQHCSKLESFKIS 333
>AT1G80570.2 | Symbols: | RNI-like superfamily protein |
chr1:30290661-30292231 FORWARD LENGTH=480
Length = 480
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 345 NITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDAS 404
+ D L V+ +LT L LS +T+ G +G +L S + +T
Sbjct: 96 QVDDQGLLVLTTNCHSLTDLTLSFCTFITDVG---IGHLSSCPELSSLKLNFAPRITGCG 152
Query: 405 IEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAISNI 464
+ ++ GC L+++ L +C V+ + + TLE L ++ C + + +I + N
Sbjct: 153 VLSLAVGCKKLRRLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLI-KLRNS 211
Query: 465 KSKFKSLTI--------VKCMGVKEIDADVSMLSPCETLRSLVIQNC---PGFGSSSLAM 513
K SL +K +++ L PC++L L + NC PG G LA
Sbjct: 212 WRKLTSLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNCIIAPGRG---LAC 268
Query: 514 IGKLCPQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGG 573
+ + C L+ + L G++D+ ++ L++ + L ++L V S
Sbjct: 269 VLRNCKNLEKLHLDMCTGVSDSDIIALVQKA-SHLRSISL--------RVPSDF------ 313
Query: 574 TLELLNLDGCWRITDASLVAIADNCLLLNDLDVS 607
TL LLN + R+TD SL AIA +C L +S
Sbjct: 314 TLPLLN-NITLRLTDESLSAIAQHCSKLESFKIS 346
>AT4G24390.1 | Symbols: | RNI-like superfamily protein |
chr4:12613909-12615966 REVERSE LENGTH=623
Length = 623
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 237 LWNVSSIGDEGLSQIAKGCHMLEKLDLCL-------SSTISNKGLIAIAEGCPNMTTLNI 289
W + SI DEGL +A C L +L + +S GL AI+EGC + ++ +
Sbjct: 366 FWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGPVSGVGLQAISEGCRKLESI-L 424
Query: 290 ESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDF 349
C + N + A++ CP+L + C ++G H R + D
Sbjct: 425 YFCQNMTNGAVTAMSENCPQLTVFRL--C-IMGRH-------------RPDHVTGKPMDD 468
Query: 350 SLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMG 409
I K LT L +SGL +T+ F +G L + +S G +D ++ +
Sbjct: 469 GFGAIVKNCKKLTRLAVSGL--LTDEAFSYIGEYGKLIRTLSVAFA---GNSDKALRYVL 523
Query: 410 KGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEEC--NRVTQSGIIGAISNI 464
+GC L+++ +R F D GL + + + L C +R G+ A+ N+
Sbjct: 524 EGCPKLQKLEIRDSPF-GDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNV 579
>AT4G24390.2 | Symbols: | RNI-like superfamily protein |
chr4:12613909-12615966 REVERSE LENGTH=623
Length = 623
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 237 LWNVSSIGDEGLSQIAKGCHMLEKLDLCL-------SSTISNKGLIAIAEGCPNMTTLNI 289
W + SI DEGL +A C L +L + +S GL AI+EGC + ++ +
Sbjct: 366 FWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGPVSGVGLQAISEGCRKLESI-L 424
Query: 290 ESCSKIGNEGLQAVARFCPKLQSISIKDCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDF 349
C + N + A++ CP+L + C ++G H R + D
Sbjct: 425 YFCQNMTNGAVTAMSENCPQLTVFRL--C-IMGRH-------------RPDHVTGKPMDD 468
Query: 350 SLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCRGVTDASIEAMG 409
I K LT L +SGL +T+ F +G L + +S G +D ++ +
Sbjct: 469 GFGAIVKNCKKLTRLAVSGL--LTDEAFSYIGEYGKLIRTLSVAFA---GNSDKALRYVL 523
Query: 410 KGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEEC--NRVTQSGIIGAISNI 464
+GC L+++ +R F D GL + + + L C +R G+ A+ N+
Sbjct: 524 EGCPKLQKLEIRDSPF-GDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNV 579
>AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 |
chr5:23449916-23450915 REVERSE LENGTH=300
Length = 300
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 26/156 (16%)
Query: 179 SLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAVAHGCPSLKSLSLW 238
S E ++ D+ L ++ + G GL K+ VR ++ LS A CP+L+ L++
Sbjct: 69 SPEFEQKVDLMLRSVVDWSEG--GLTKIR------VRHCSDHALSYAADRCPNLQVLAIR 120
Query: 239 NVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLN---------- 288
+ ++ D +++IA C L++LD+ IS+ L+ I CPN+ L
Sbjct: 121 SSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRH 180
Query: 289 --------IESCSKIGNEGLQAVARFCPKLQSISIK 316
+++C + G+ A+ + L+ + I+
Sbjct: 181 IGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQ 216
>AT5G51370.1 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20873850 FORWARD LENGTH=355
Length = 355
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 178 RSLEGKKATDVRLAAIAVGTSGRGGLGKLSIRGSNSVRG-----VTNLGLSAVAHGCPSL 232
+ LE K D L IA + +G +R SV G V+++GL+ +A GC SL
Sbjct: 177 QELELHKCNDNLLHGIAACKNLKG------LRLVGSVDGLYSSSVSDIGLTFLAQGCRSL 230
Query: 233 KSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESC 292
L L D G+ I + C +LE+L +C + G IA ++ L I SC
Sbjct: 231 VKLELSGCEGSFD-GIKAIGQCCEVLEELSICDHRM--DDGWIAALSYFESLKILRISSC 287
Query: 293 SKI-GNEGLQAVARFCPKLQSISIKDCPLVGDHGV 326
KI + G + + R CP ++S+ +K C L G+
Sbjct: 288 RKIDASPGPEKLLRSCPAMESLQLKRCCLNDKEGI 322
>AT5G67140.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:26794009-26795213 REVERSE LENGTH=228
Length = 228
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 32/212 (15%)
Query: 109 QKPGIEVLPDECLFEIFRRLPSSKERSSCACVSKKWLMLMSSICKAEIEDVEMRSSXXXX 168
++ I+ LP + L IF S + + V KKW KA + + R
Sbjct: 3 EEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWR-------KAVNQSMARRE----- 50
Query: 169 XXXXXXYLTRSLEGKKATD---VRLAAIAVGTSGRGGLGKLSIRGSNSVRGVTNLGLSAV 225
T S G K D RL +A L +L I S +T+ GL +
Sbjct: 51 --------TLSFAGWKMDDDSTSRLVHLAFN------LKELDISRSRWGCHITDNGLYQI 96
Query: 226 AHG--CPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPN 283
A +L S+SLW +++I D G+ Q+ L+ L++ + I+++ L AIAE C
Sbjct: 97 ASARCVSNLNSVSLWGMTAITDSGVVQLISRTSSLQHLNIG-GTFITDESLFAIAERCHQ 155
Query: 284 MTTLNIESCSKIGNEGLQAVARFCPKLQSISI 315
+ T+ + C + GL + C KL+SI++
Sbjct: 156 LKTIGMWCCRHVTERGLLVLVNKCRKLESINL 187
>AT5G51380.1 | Symbols: | RNI-like superfamily protein |
chr5:20875945-20877779 FORWARD LENGTH=479
Length = 479
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 34/281 (12%)
Query: 339 VKLQSLNITDFSLAVIGHYGKALTHLVLSGLQNVTERGFWVMGVAQGLQKLVSFTVTSCR 398
+KL +N T+ L + L L L + RG +GL+ + S
Sbjct: 190 IKLVVINATELGLLSLAEDCSDLQELELHKCSDNLLRGIAACENLRGLRLVGSVDGLYSS 249
Query: 399 GVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECNRVTQSGII 458
V+D + + +GC L ++ L C D G+ A + LE L + C+ G I
Sbjct: 250 SVSDIGLTILAQGCKRLVKLELSGCEGSFD-GIKAIGQCCEVLEELSI--CDHRMDDGWI 306
Query: 459 GAISNIKSKFKSLTIVKCMGVKEIDADVSMLSPCETLRSLVIQNCPGFGSSSLAMIGKLC 518
A+S +S K+L I C ++ID+ PG G ++G C
Sbjct: 307 AALSYFES-LKTLLISSC---RKIDSS------------------PGPG----KLLGS-C 339
Query: 519 PQLQHVDLTGLYGITDAGLLPLLENCEAGLVKVNLTGCWNLTDNVVSTLARLHGGTLELL 578
P L+ + L G+ L + C+ G+ KVN+ CW L D+ S + L
Sbjct: 340 PALESLQLRRCCLNDKEGMRALFKVCD-GVTKVNIQDCWGLDDDSFSLAKAFR--RVRFL 396
Query: 579 NLDGCWRITDASLVAIADNCLLLNDLDVSKCA-ITDAGLAV 618
+L+GC +T + L ++ + L + V C I D+ ++
Sbjct: 397 SLEGCSILTTSGLESVILHWEELESMRVVSCKNIKDSEISA 437
>AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein |
chr3:23273479-23276181 REVERSE LENGTH=594
Length = 594
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 47/237 (19%)
Query: 229 CPSLKSLSLWNVSSIGDEGLSQIAKGCHMLEKLDLCLSS--------TISNKGLIAIAEG 280
CP L+ L W + I D GL +A C L +L + S ++ +GL++++ G
Sbjct: 313 CPKLQRL--WVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMG 370
Query: 281 CPNMTTLNIESCSKIGNEGLQAVARFCPKLQSISIKDC---PLVGDHGVXXXXXXXXXXX 337
CP + ++ + C ++ N L +AR P + + C P D+
Sbjct: 371 CPKLESV-LYFCRQMTNAALITIARNRPNMTRFRL--CIIEPKAPDY------------- 414
Query: 338 RVKLQSLNITDFSLAVIGHYGKALTH----LVLSGLQNVTERGFWVMGVAQGLQKLVSFT 393
+ L+ L+I +G + H LS +T++ F +G +++S
Sbjct: 415 -LTLEPLDIG---------FGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVA 464
Query: 394 VTSCRGVTDASIEAMGKGCTNLKQMSLRKCCFVSDSGLVAFAKAAGTLESLQLEECN 450
G +D + + GC +L+++ +R C F D L+A A T+ SL + C+
Sbjct: 465 FA---GDSDLGMHHVLSGCDSLRKLEIRDCPF-GDKALLANASKLETMRSLWMSSCS 517
>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
chr2:16672848-16675486 REVERSE LENGTH=592
Length = 592
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 25/245 (10%)
Query: 240 VSSIGDEGLSQIAKGCHMLEKLDLCLSSTISNKGLIAIAEGCPNMTTLNIESCSKIGNEG 299
+S +G + + + KLDL L + + + + + CPN+ L E+ + IG+ G
Sbjct: 277 LSYMGPNEMPILFPFAAQIRKLDL-LYALLETEDHCTLIQKCPNLEVL--ETRNVIGDRG 333
Query: 300 LQAVARFCPKLQSISIK----------DCPLVGDHGVXXXXXXXXXXXRVKLQSLNITDF 349
L+ +A++C +L+ + I+ + LV G+ + + +IT+
Sbjct: 334 LEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNE 393
Query: 350 SLAVIGHYGKALTHL---VLSGLQNVTERGF--WVMGVAQGLQKLVSFTVTSCR-GVTDA 403
SL IG Y K L +L + +T+ V + G +KL F + G+TD
Sbjct: 394 SLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDL 453
Query: 404 SIEAMGKGCTNLKQMSLRKCCFV--SDSGLVAFAKAAGTLESLQLEECNRVTQSGIIGAI 461
+ +G+ N++ M L +V SD GL+ F++ L+ L++ C ++ I A+
Sbjct: 454 GLSYIGQYSPNVRWMLL---GYVGESDEGLMEFSRGCPNLQKLEMRGCC-FSERAIAAAV 509
Query: 462 SNIKS 466
+ + S
Sbjct: 510 TKLPS 514