Miyakogusa Predicted Gene

Lj4g3v1880330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1880330.1 Non Chatacterized Hit- tr|I3S3A7|I3S3A7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR
1-RELATED,NULL;
coiled-coil,,NODE_11622_length_1004_cov_110.343628.path1.1
         (224 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26660.1 | Symbols: ATSPX2, SPX2 | SPX domain gene 2 | chr2:1...   280   6e-76
AT5G20150.1 | Symbols: ATSPX1, SPX1 | SPX  domain gene 1 | chr5:...   276   1e-74
AT2G45130.1 | Symbols: ATSPX3, SPX3 | SPX domain gene 3 | chr2:1...   155   2e-38
AT5G15330.1 | Symbols: ATSPX4, SPX4 | SPX domain gene 4 | chr5:4...   146   9e-36

>AT2G26660.1 | Symbols: ATSPX2, SPX2 | SPX domain gene 2 |
           chr2:11338932-11340703 FORWARD LENGTH=287
          Length = 287

 Score =  280 bits (716), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 153/229 (66%), Positives = 176/229 (76%), Gaps = 9/229 (3%)

Query: 1   MSKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVD 60
           M+KEE DF +LLE+EL+            YIIRLKEL+D+VAK K S+E+M+ I+KEIVD
Sbjct: 63  MTKEELDFISLLEDELEKFNSFFVEQEEEYIIRLKELKDQVAKAKNSNEEMINIKKEIVD 122

Query: 61  FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC 120
           FHGEMVLL NYSALNYTGL KILKKYDKRTGALIRLPFIQKVLQ+PFFTTDLL   VKEC
Sbjct: 123 FHGEMVLLMNYSALNYTGLAKILKKYDKRTGALIRLPFIQKVLQEPFFTTDLLNTFVKEC 182

Query: 121 ETMLDYLFPAI---DLAASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYMK 177
           E MLD LFP+    +L   GE T    V     + T  S+ L +PKEL+EIEYMESLYMK
Sbjct: 183 EAMLDRLFPSNKSRNLDEEGEPTTSGMV----KTGTDDSELLRVPKELSEIEYMESLYMK 238

Query: 178 STVSALNVLQEIRSGSSTVSMFSLPPLQLSGVE-ETW-KKIPVLEQTAK 224
           STVSAL VL+EIRSGSSTVS+FSLPPL  SG+E ++W KK+ VLEQ AK
Sbjct: 239 STVSALKVLKEIRSGSSTVSVFSLPPLPASGLEDDSWKKKVGVLEQVAK 287


>AT5G20150.1 | Symbols: ATSPX1, SPX1 | SPX  domain gene 1 |
           chr5:6802429-6803367 FORWARD LENGTH=256
          Length = 256

 Score =  276 bits (705), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/224 (63%), Positives = 170/224 (75%), Gaps = 23/224 (10%)

Query: 1   MSKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVD 60
           +SKEE +F  LLE+EL+            YIIRLKE +DR+AK K S E+M+KIRKEIVD
Sbjct: 56  ISKEEINFIQLLEDELEKFNNFFVEKEEEYIIRLKEFRDRIAKAKDSMEKMIKIRKEIVD 115

Query: 61  FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC 120
           FHGEMVLLENYSALNYTGLVKILKKYDKRTG L+RLPFIQKVLQQPF+TTDLL+KLVKE 
Sbjct: 116 FHGEMVLLENYSALNYTGLVKILKKYDKRTGDLMRLPFIQKVLQQPFYTTDLLFKLVKES 175

Query: 121 ETMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKSTV 180
           E MLD +FPA                        +++  +I  EL+E ++MESL+MKST+
Sbjct: 176 EAMLDQIFPA-----------------------NETESEIIQAELSEHKFMESLHMKSTI 212

Query: 181 SALNVLQEIRSGSSTVSMFSLPPLQLSGVEETWKKIPVLEQTAK 224
           +AL VL+EIRSGSSTVS+FSLPPLQL+G++ETWKKIP+LEQ AK
Sbjct: 213 AALRVLKEIRSGSSTVSVFSLPPLQLNGLDETWKKIPLLEQEAK 256


>AT2G45130.1 | Symbols: ATSPX3, SPX3 | SPX domain gene 3 |
           chr2:18606489-18607754 FORWARD LENGTH=245
          Length = 245

 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 124/211 (58%), Gaps = 30/211 (14%)

Query: 5   ETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKV--------KASSEQMMKIRK 56
           E+ F  LL  E+D            +II  KELQ R+ ++        + S E + +IRK
Sbjct: 39  ESIFVGLLNAEIDKFNAFFVEQEEDFIIHHKELQYRIQRLVEKCGHNDEMSRENISEIRK 98

Query: 57  EIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKL 116
           +IV+FHGEMVLL NYS +NYTGL KILKKYDKRT   +R PFIQKVL QPFF TDL+ +L
Sbjct: 99  DIVNFHGEMVLLVNYSNINYTGLAKILKKYDKRTRGGLRSPFIQKVLHQPFFKTDLVSRL 158

Query: 117 VKECETMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYM 176
           V+E ET +D + P            +AE ++   + T+ + G             E ++ 
Sbjct: 159 VREWETTMDAVDPV--------KVAEAEGYERCAAVTSAAAG-------------EGIF- 196

Query: 177 KSTVSALNVLQEIRSGSSTVSMFSLPPLQLS 207
           ++TV+AL  ++E+R GSST S FSLPPL +S
Sbjct: 197 RNTVAALLTMKEMRRGSSTYSAFSLPPLNIS 227


>AT5G15330.1 | Symbols: ATSPX4, SPX4 | SPX domain gene 4 |
           chr5:4980595-4982043 FORWARD LENGTH=318
          Length = 318

 Score =  146 bits (369), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 132/221 (59%), Gaps = 27/221 (12%)

Query: 8   FRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKAS----------SEQMMKIRKE 57
           F  +L +EL+            ++IRL+EL++R+ +VK            SE+MM IR++
Sbjct: 85  FVRILNDELEKFNDFYVDKEEDFVIRLQELKERIEQVKEKNGEFASESEFSEEMMDIRRD 144

Query: 58  IVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLV 117
           +V  HGEMVLL+NYS+LN+ GLVKILKKYDKRTG L+RLPF Q VL QPFFTT+ L +LV
Sbjct: 145 LVTIHGEMVLLKNYSSLNFAGLVKILKKYDKRTGGLLRLPFTQLVLHQPFFTTEPLTRLV 204

Query: 118 KECETMLDYLFPAIDLAASGETTPQAEVFDPST-----STTTKSDGLLIPKELAEIEYME 172
           +ECE  L+ LFP+           +AEV + S+     S++ + +   I  E +     E
Sbjct: 205 RECEANLELLFPS-----------EAEVVESSSAVQAHSSSHQHNSPRISAETSSTLGNE 253

Query: 173 SLYM-KSTVSALNVLQEIRSGSSTVSMFSLPPLQLSGVEET 212
           +L + KST++A+  ++ ++  SST +  S   L  +  +ET
Sbjct: 254 NLDIYKSTLAAMRAIRGLQKASSTYNPLSFSSLLQNEDDET 294