Miyakogusa Predicted Gene
- Lj4g3v1877050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1877050.1 Non Chatacterized Hit- tr|I1LZZ7|I1LZZ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44583
PE,71.66,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase,
C-termina,NODE_69233_length_1969_cov_11.275775.path2.1
(482 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 531 e-151
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 519 e-147
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 515 e-146
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 515 e-146
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 515 e-146
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 291 5e-79
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 285 3e-77
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 285 4e-77
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 285 4e-77
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 285 4e-77
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 283 1e-76
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 283 3e-76
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 277 1e-74
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 267 1e-71
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 263 2e-70
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 252 4e-67
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 250 2e-66
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 247 1e-65
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 241 8e-64
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 236 2e-62
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 236 4e-62
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 229 3e-60
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 229 3e-60
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 228 7e-60
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 224 1e-58
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 218 8e-57
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 218 1e-56
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 216 3e-56
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 199 4e-51
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 190 2e-48
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 189 3e-48
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 180 2e-45
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 178 6e-45
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 178 7e-45
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 178 7e-45
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 177 1e-44
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 176 2e-44
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 176 4e-44
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 176 4e-44
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 176 4e-44
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 175 6e-44
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 174 1e-43
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 174 1e-43
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 172 4e-43
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 169 3e-42
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 166 4e-41
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 162 4e-40
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 162 5e-40
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 162 6e-40
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 162 6e-40
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 160 1e-39
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 160 2e-39
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 160 2e-39
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 157 2e-38
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 156 2e-38
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 156 4e-38
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 156 4e-38
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 153 2e-37
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 153 2e-37
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 153 3e-37
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 152 4e-37
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 152 6e-37
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 150 2e-36
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 145 5e-35
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 143 3e-34
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 142 8e-34
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 139 6e-33
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 129 6e-30
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 129 7e-30
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 123 4e-28
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 122 5e-28
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 116 4e-26
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 114 1e-25
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 114 1e-25
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 110 2e-24
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 107 2e-23
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 87 3e-17
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 74 2e-13
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 72 7e-13
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 531 bits (1368), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/367 (71%), Positives = 303/367 (82%), Gaps = 10/367 (2%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
MACAQTGSGKTAAFCFPIISG++K + PR V YP A+ILSPTREL+
Sbjct: 187 MACAQTGSGKTAAFCFPIISGIMKDQHIER--------PRGVRGV-YPLAVILSPTRELA 237
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
CQIH EA KF++QTGVK+VVAYGG + +Q++ LE+GVDILVATPGRL D++ER RVSL
Sbjct: 238 CQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQ 297
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+++LALDEADRMLDMGFE QIRKIVQQM MPPPGVRQTMLFSATFP +IQ+LA+DFLSN
Sbjct: 298 MVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSN 357
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
YIFLAVGRVGSST+LIVQ++E V D+DKR+HL +LL QR N + GKQALTL+FVETKKG
Sbjct: 358 YIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKG 417
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
AD+LE WL NGFPA IHGD+ Q ERE ALRSFK G TPILVATDVA+RGLDIPHVAHV
Sbjct: 418 ADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHV 477
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLG 360
+N+DLP DI DYVHRIGRTGRAG SGLATAFF+ N N +AK L E++QEA QEVP WL
Sbjct: 478 VNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDN-NTTMAKPLAELMQEANQEVPDWLT 536
Query: 361 QFAEGSS 367
++A +S
Sbjct: 537 RYASRAS 543
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 519 bits (1337), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/367 (70%), Positives = 302/367 (82%), Gaps = 10/367 (2%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
MACAQTGSGKTAAFCFPIISG++K + PR V YP A+ILSPTREL+
Sbjct: 200 MACAQTGSGKTAAFCFPIISGIMKDQHVQR--------PRGSRTV-YPLAVILSPTRELA 250
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QIH EA KF++QTGVK+VVAYGG I +QL+ LE+GVDILVATPGRL D++ER RVS+
Sbjct: 251 SQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQ 310
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
I++LALDEADRMLDMGFE QIRKIV+QM MPP GVRQT+LFSATFP +IQ+LAADFL+N
Sbjct: 311 MIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLAN 370
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
YIFLAVGRVGSST+LIVQ++E V D+DKR+HL +LL QR N GKQALTL+FVETK+G
Sbjct: 371 YIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRG 430
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
AD+LE WL NGFPA +IHGD+ Q ERE AL++FK G TPILVATDVA+RGLDIPHVAHV
Sbjct: 431 ADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHV 490
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLG 360
+N+DLP DI DYVHRIGRTGRAGKSGLATAFF ++ N +A+ L E++QEA QEVP WL
Sbjct: 491 VNFDLPNDIDDYVHRIGRTGRAGKSGLATAFF-NDGNTSLARPLAELMQEANQEVPEWLT 549
Query: 361 QFAEGSS 367
++A SS
Sbjct: 550 RYASRSS 556
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/367 (69%), Positives = 300/367 (81%), Gaps = 12/367 (3%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
MACAQTGSGKTAAFCFPIISG++K + PR V YP A+ILSPTREL+
Sbjct: 192 MACAQTGSGKTAAFCFPIISGIMKDQHVER--------PRGSRAV-YPFAVILSPTRELA 242
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
CQIH EA KF++QTGVK+VVAYGG I +QL+ LE+G DILVATPGRL D++ER RVS+
Sbjct: 243 CQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQ 302
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
I++LALDEADRMLDMGFE QIRKIV+QM MPP GVRQTMLFSATFP+ IQ+LAADF+SN
Sbjct: 303 MIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSN 362
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
YIFLAVGRVGSST+LI Q++E VQ++DKR+HL +LL QR D KQ+LTL+FVETK+G
Sbjct: 363 YIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQD--KQSLTLVFVETKRG 420
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
AD LE WL N FPA +IHGD+ Q ERE ALRSFK G TPILVATDVA+RGLDIPHVAHV
Sbjct: 421 ADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHV 480
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLG 360
+N+DLP DI DYVHRIGRTGRAGKSG+ATAFF+ N N +A++L E++QEA QEVP WL
Sbjct: 481 VNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNEN-NAQLARSLAELMQEANQEVPEWLT 539
Query: 361 QFAEGSS 367
++A +S
Sbjct: 540 RYASRAS 546
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/367 (69%), Positives = 300/367 (81%), Gaps = 12/367 (3%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
MACAQTGSGKTAAFCFPIISG++K + PR V YP A+ILSPTREL+
Sbjct: 192 MACAQTGSGKTAAFCFPIISGIMKDQHVER--------PRGSRAV-YPFAVILSPTRELA 242
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
CQIH EA KF++QTGVK+VVAYGG I +QL+ LE+G DILVATPGRL D++ER RVS+
Sbjct: 243 CQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQ 302
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
I++LALDEADRMLDMGFE QIRKIV+QM MPP GVRQTMLFSATFP+ IQ+LAADF+SN
Sbjct: 303 MIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSN 362
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
YIFLAVGRVGSST+LI Q++E VQ++DKR+HL +LL QR D KQ+LTL+FVETK+G
Sbjct: 363 YIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQD--KQSLTLVFVETKRG 420
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
AD LE WL N FPA +IHGD+ Q ERE ALRSFK G TPILVATDVA+RGLDIPHVAHV
Sbjct: 421 ADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHV 480
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLG 360
+N+DLP DI DYVHRIGRTGRAGKSG+ATAFF+ N N +A++L E++QEA QEVP WL
Sbjct: 481 VNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNEN-NAQLARSLAELMQEANQEVPEWLT 539
Query: 361 QFAEGSS 367
++A +S
Sbjct: 540 RYASRAS 546
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/367 (69%), Positives = 300/367 (81%), Gaps = 12/367 (3%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
MACAQTGSGKTAAFCFPIISG++K + PR V YP A+ILSPTREL+
Sbjct: 192 MACAQTGSGKTAAFCFPIISGIMKDQHVER--------PRGSRAV-YPFAVILSPTRELA 242
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
CQIH EA KF++QTGVK+VVAYGG I +QL+ LE+G DILVATPGRL D++ER RVS+
Sbjct: 243 CQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQ 302
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
I++LALDEADRMLDMGFE QIRKIV+QM MPP GVRQTMLFSATFP+ IQ+LAADF+SN
Sbjct: 303 MIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSN 362
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
YIFLAVGRVGSST+LI Q++E VQ++DKR+HL +LL QR D KQ+LTL+FVETK+G
Sbjct: 363 YIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQD--KQSLTLVFVETKRG 420
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
AD LE WL N FPA +IHGD+ Q ERE ALRSFK G TPILVATDVA+RGLDIPHVAHV
Sbjct: 421 ADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHV 480
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLG 360
+N+DLP DI DYVHRIGRTGRAGKSG+ATAFF+ N N +A++L E++QEA QEVP WL
Sbjct: 481 VNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNEN-NAQLARSLAELMQEANQEVPEWLT 539
Query: 361 QFAEGSS 367
++A +S
Sbjct: 540 RYASRAS 546
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/360 (45%), Positives = 224/360 (62%), Gaps = 26/360 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKT A+ P + V + + D P LIL+PTREL+
Sbjct: 206 IGIAETGSGKTLAYLLPALVHV----------SAQPRLGQDDG----PIVLILAPTRELA 251
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI E+ KF ++GV+ YGGA Q+++L +GV+I++ATPGRL+D++E + +L
Sbjct: 252 VQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLK 311
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
++ YL LDEADRMLDMGFE QIRKIV Q+ RQT+L+SAT+P +++ LA FL +
Sbjct: 312 RVTYLVLDEADRMLDMGFEPQIRKIVSQIRPD----RQTLLWSATWPREVETLARQFLRD 367
Query: 181 YIFLAVGRVG-SSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
+G + + I Q IE+V +K N L LL + +D K LIFVETK+
Sbjct: 368 PYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLL---KQLMDGSK---ILIFVETKR 421
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
G D + L +G+PA+AIHGDK Q ER+R L FK G +PI+ ATDVA+RGLD+ +
Sbjct: 422 GCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKC 481
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
V+NYD P + DY+HRIGRTGRAG G+A FF+ + N A+ LV+ILQEA Q VP L
Sbjct: 482 VVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHD-NAKFARELVKILQEAGQVVPPTL 540
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/365 (45%), Positives = 223/365 (61%), Gaps = 29/365 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TGSGKT + P G L + R+D+ + PT L+LSPTREL+
Sbjct: 199 VAIAKTGSGKTLGYLIP---GFLHLQRI-----------RNDSRMG-PTILVLSPTRELA 243
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI EA KF + + YGGA QL++LE+G DI+VATPGRL DI+E R+SL
Sbjct: 244 TQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLR 303
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+I YL LDEADRMLDMGFE QIRKIV+++ P RQT++++AT+P ++K+AAD L N
Sbjct: 304 QISYLVLDEADRMLDMGFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVN 359
Query: 181 YIFLAVGRVGS--STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETK 238
+ +G V + + I Q IE+V +K+ L +L Q + +IF TK
Sbjct: 360 PAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPG------SKVIIFCSTK 413
Query: 239 KGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVA 298
+ D L L+R F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ +
Sbjct: 414 RMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIR 472
Query: 299 HVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAW 358
V+NYD P + DYVHRIGRTGRAG +G A FF +++ A L++IL+ A Q VP
Sbjct: 473 AVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF-GDQDSKHASDLIKILEGANQRVPPQ 531
Query: 359 LGQFA 363
+ + A
Sbjct: 532 IREMA 536
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/365 (45%), Positives = 223/365 (61%), Gaps = 29/365 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TGSGKT + P G L + R+D+ + PT L+LSPTREL+
Sbjct: 199 VAIAKTGSGKTLGYLIP---GFLHLQRI-----------RNDSRMG-PTILVLSPTRELA 243
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI EA KF + + YGGA QL++LE+G DI+VATPGRL DI+E R+SL
Sbjct: 244 TQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLR 303
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+I YL LDEADRMLDMGFE QIRKIV+++ P RQT++++AT+P ++K+AAD L N
Sbjct: 304 QISYLVLDEADRMLDMGFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVN 359
Query: 181 YIFLAVGRVGS--STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETK 238
+ +G V + + I Q IE+V +K+ L +L Q + +IF TK
Sbjct: 360 PAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPG------SKVIIFCSTK 413
Query: 239 KGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVA 298
+ D L L+R F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ +
Sbjct: 414 RMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIR 472
Query: 299 HVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAW 358
V+NYD P + DYVHRIGRTGRAG +G A FF +++ A L++IL+ A Q VP
Sbjct: 473 AVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF-GDQDSKHASDLIKILEGANQRVPPQ 531
Query: 359 LGQFA 363
+ + A
Sbjct: 532 IREMA 536
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/365 (45%), Positives = 223/365 (61%), Gaps = 29/365 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TGSGKT + P G L + R+D+ + PT L+LSPTREL+
Sbjct: 199 VAIAKTGSGKTLGYLIP---GFLHLQRI-----------RNDSRMG-PTILVLSPTRELA 243
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI EA KF + + YGGA QL++LE+G DI+VATPGRL DI+E R+SL
Sbjct: 244 TQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLR 303
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+I YL LDEADRMLDMGFE QIRKIV+++ P RQT++++AT+P ++K+AAD L N
Sbjct: 304 QISYLVLDEADRMLDMGFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVN 359
Query: 181 YIFLAVGRVGS--STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETK 238
+ +G V + + I Q IE+V +K+ L +L Q + +IF TK
Sbjct: 360 PAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPG------SKVIIFCSTK 413
Query: 239 KGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVA 298
+ D L L+R F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ +
Sbjct: 414 RMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIR 472
Query: 299 HVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAW 358
V+NYD P + DYVHRIGRTGRAG +G A FF +++ A L++IL+ A Q VP
Sbjct: 473 AVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF-GDQDSKHASDLIKILEGANQRVPPQ 531
Query: 359 LGQFA 363
+ + A
Sbjct: 532 IREMA 536
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/365 (45%), Positives = 223/365 (61%), Gaps = 29/365 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TGSGKT + P G L + R+D+ + PT L+LSPTREL+
Sbjct: 199 VAIAKTGSGKTLGYLIP---GFLHLQRI-----------RNDSRMG-PTILVLSPTRELA 243
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI EA KF + + YGGA QL++LE+G DI+VATPGRL DI+E R+SL
Sbjct: 244 TQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLR 303
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+I YL LDEADRMLDMGFE QIRKIV+++ P RQT++++AT+P ++K+AAD L N
Sbjct: 304 QISYLVLDEADRMLDMGFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVN 359
Query: 181 YIFLAVGRVGS--STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETK 238
+ +G V + + I Q IE+V +K+ L +L Q + +IF TK
Sbjct: 360 PAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPG------SKVIIFCSTK 413
Query: 239 KGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVA 298
+ D L L+R F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ +
Sbjct: 414 RMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIR 472
Query: 299 HVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAW 358
V+NYD P + DYVHRIGRTGRAG +G A FF +++ A L++IL+ A Q VP
Sbjct: 473 AVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF-GDQDSKHASDLIKILEGANQRVPPQ 531
Query: 359 LGQFA 363
+ + A
Sbjct: 532 IREMA 536
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/365 (44%), Positives = 225/365 (61%), Gaps = 29/365 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TGSGKT + P G + + +D+ + PT L+LSPTREL+
Sbjct: 202 VAIAKTGSGKTLGYLIP---GFMHLQRI-----------HNDSRMG-PTILVLSPTRELA 246
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI EA KF + + YGGA QL+ +E+GVDI+VATPGRL DI+E +R+SL
Sbjct: 247 TQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLH 306
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
++ YL LDEADRMLDMGFE QIRKIV ++ P RQT++++AT+P +++K+AAD L N
Sbjct: 307 QVSYLVLDEADRMLDMGFEPQIRKIVNEV----PTKRQTLMYTATWPKEVRKIAADLLVN 362
Query: 181 YIFLAVGRVGS--STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETK 238
+ +G V + + I Q IE++ +K + L +L Q + +IF TK
Sbjct: 363 PAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPG------SKIIIFCSTK 416
Query: 239 KGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVA 298
+ D L L+R F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ +
Sbjct: 417 RMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIR 475
Query: 299 HVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAW 358
V+NYD P + DYVHRIGRTGRAG +GLA FF +++ A L++IL+ A Q+VP
Sbjct: 476 VVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFF-GDQDAKHASDLIKILEGANQKVPPQ 534
Query: 359 LGQFA 363
+ + A
Sbjct: 535 VREMA 539
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/365 (44%), Positives = 225/365 (61%), Gaps = 29/365 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TGSGKT + P G + + +D+ + PT L+LSPTREL+
Sbjct: 270 VAIAKTGSGKTLGYLIP---GFMHLQRI-----------HNDSRMG-PTILVLSPTRELA 314
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI EA KF + + YGGA QL+ +E+GVDI+VATPGRL DI+E +R+SL
Sbjct: 315 TQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLH 374
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
++ YL LDEADRMLDMGFE QIRKIV ++ P RQT++++AT+P +++K+AAD L N
Sbjct: 375 QVSYLVLDEADRMLDMGFEPQIRKIVNEV----PTKRQTLMYTATWPKEVRKIAADLLVN 430
Query: 181 YIFLAVGRVGS--STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETK 238
+ +G V + + I Q IE++ +K + L +L Q + +IF TK
Sbjct: 431 PAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPG------SKIIIFCSTK 484
Query: 239 KGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVA 298
+ D L L+R F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ +
Sbjct: 485 RMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIR 543
Query: 299 HVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAW 358
V+NYD P + DYVHRIGRTGRAG +GLA FF +++ A L++IL+ A Q+VP
Sbjct: 544 VVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFF-GDQDAKHASDLIKILEGANQKVPPQ 602
Query: 359 LGQFA 363
+ + A
Sbjct: 603 VREMA 607
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 221/368 (60%), Gaps = 26/368 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKT ++ P I V + D P L+L+PTREL+
Sbjct: 140 IGIAETGSGKTLSYLLPAIVHV----------NAQPMLAHGDG----PIVLVLAPTRELA 185
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI EA+KF + +K YGG Q+++L+KGV+I++ATPGRL+D++E +L
Sbjct: 186 VQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLR 245
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
++ YL LDEADRMLDMGF+ QIRKIV H+ P RQT+ +SAT+P ++++L+ FL N
Sbjct: 246 RVTYLVLDEADRMLDMGFDPQIRKIVS--HIRPD--RQTLYWSATWPKEVEQLSKKFLYN 301
Query: 181 YIFLAVGRVG-SSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
+ +G + I Q ++++ ++ K N L LL ++ G + L+F++TKK
Sbjct: 302 PYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLL----EDIMDGSR--ILVFLDTKK 355
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
G D + L +G+PA++IHGDK Q ER+ L F+ G +PI+ ATDVA+RGLD+ V +
Sbjct: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKY 415
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
VINYD P + DYVHRIGRTGRAG G A FF+ N AK L ILQEA Q+V L
Sbjct: 416 VINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTV-ANARFAKELTNILQEAGQKVSPEL 474
Query: 360 GQFAEGSS 367
++
Sbjct: 475 ASMGRSTA 482
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/365 (41%), Positives = 216/365 (59%), Gaps = 29/365 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TGSGKT + P + R PT LIL+PTREL+
Sbjct: 476 VAIAKTGSGKTLGYLIPAFILLRHCRNDSRNG---------------PTVLILAPTRELA 520
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI EA +F + + YGGA QL+ LE+G DI+VATPGRL DI+E + +
Sbjct: 521 TQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQ 580
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
++ L LDEADRMLDMGFE QIRKIV ++ P RQT++++AT+P +++K+A+D L N
Sbjct: 581 QVSLLVLDEADRMLDMGFEPQIRKIVNEI----PPRRQTLMYTATWPKEVRKIASDLLVN 636
Query: 181 YIFLAVGRVG--SSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETK 238
+ + +GRV ++ + I Q +E+V +K L +L Q + + +IF TK
Sbjct: 637 PVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQE------RGSKVIIFCSTK 690
Query: 239 KGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVA 298
+ D L + R+ F A+ IHGDK Q ER+ L F+ G + +L+ATDVA+RGLDI +
Sbjct: 691 RLCDHLARSVGRH-FGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIR 749
Query: 299 HVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAW 358
VINYD P + DYVHRIGRTGRAG +G+A FF+ ++ A L+++L+ A Q+VP
Sbjct: 750 VVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTE-QDWKYAPDLIKVLEGANQQVPPQ 808
Query: 359 LGQFA 363
+ A
Sbjct: 809 VRDIA 813
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/365 (43%), Positives = 215/365 (58%), Gaps = 21/365 (5%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKT AF P I VLK PT L+LSPTREL+
Sbjct: 155 IGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKK----------VNPTCLVLSPTRELA 204
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI + G+K + YGG+S Q+ + GVDI++ TPGRL D+IE + LS
Sbjct: 205 VQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLS 264
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS- 179
+ ++ LDEADRMLDMGFE+ +R I+ + VRQ ++FSAT+P D+ KLA +F+
Sbjct: 265 DVSFVVLDEADRMLDMGFEEPVRFILSNTNK----VRQMVMFSATWPLDVHKLAQEFMDP 320
Query: 180 NYIFLAVGRVG-SSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETK 238
N I + +G V ++ ++Q IE++ + + L LL + + ++ L+F K
Sbjct: 321 NPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKS----QKNRVLVFALYK 376
Query: 239 KGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVA 298
A+ LE +L + G+ A++IHG+K Q ER R+L FK G P+LVATDVA+RGLDIP V
Sbjct: 377 VEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVE 436
Query: 299 HVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAW 358
VINY P DYVHRIGRTGRAGK G+A FF+ N +A LV +L+EA Q VPA
Sbjct: 437 VVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTP-LNKGLAGELVNVLREAGQVVPAD 495
Query: 359 LGQFA 363
L +F
Sbjct: 496 LLKFG 500
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 217/375 (57%), Gaps = 34/375 (9%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAF-VAYPTALILSPTREL 59
+ A+TGSGKTAAF P+++ + + P S+ P A++++PTREL
Sbjct: 354 IGIAETGSGKTAAFVLPMLAYISR------------LPPMSEENETEGPYAVVMAPTREL 401
Query: 60 SCQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSL 119
+ QI E KFAH G ++ GG SI +Q + +G +I++ATPGRL+D +ER L
Sbjct: 402 AQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVL 461
Query: 120 SKIKYLALDEADRMLDMGFEQQIRKIVQQM---HMPPPGV----------RQTMLFSATF 166
++ Y+ LDEADRM+DMGFE Q+ ++ M ++ P R T +FSAT
Sbjct: 462 NQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATM 521
Query: 167 PTDIQKLAADFLSNYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHG 226
P +++LA +L N + + +G G +T+LI Q + ++++++K L LL D
Sbjct: 522 PPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLL-------DEL 574
Query: 227 KQALTLIFVETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATD 286
+ ++FV TKK D++ L + G+ +HG K Q +RE +L F+ +LVATD
Sbjct: 575 GEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATD 634
Query: 287 VASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVE 346
V RG+DIP VAHVINYD+P+ I Y HRIGRTGRAGKSG+AT+F + + + + L +
Sbjct: 635 VVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLH-DTEVFYDLKQ 693
Query: 347 ILQEAKQEVPAWLGQ 361
+L ++ VP L +
Sbjct: 694 MLVQSNSAVPPELAR 708
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 209/368 (56%), Gaps = 29/368 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A TGSGKT F P+I L+ A P LI+ P+REL+
Sbjct: 187 IGIAFTGSGKTLVFVLPMIMIALQEEMMMPI-----------AAGEGPIGLIVCPSRELA 235
Query: 61 CQIHAEATKF------AHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIER 114
Q + +F A ++ ++ GG + QL+ +++GV I+VATPGRL D++ +
Sbjct: 236 RQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAK 295
Query: 115 ERVSLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLA 174
+++SL +YL LDEADR++D+GFE IR++ RQT+LFSAT PT IQ A
Sbjct: 296 KKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFK----SQRQTLLFSATMPTKIQIFA 351
Query: 175 ADFLSNYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIF 234
L + + VGR G++ ++Q++E V+ K +L L C Q+ + LIF
Sbjct: 352 RSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYL--LECLQKTS------PPVLIF 403
Query: 235 VETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDI 294
E K D + +L G A+AIHG K Q +RE A+ SFK G +LVATDVAS+GLD
Sbjct: 404 CENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDF 463
Query: 295 PHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQE 354
P + HVINYD+P +I +YVHRIGRTGR GK+G+AT F + N++ L +LQEAKQ
Sbjct: 464 PDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQR 523
Query: 355 VPAWLGQF 362
+P L +
Sbjct: 524 IPPVLAEL 531
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 206/364 (56%), Gaps = 25/364 (6%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKTAAF P+I ++ + R + P +I +PTREL+
Sbjct: 269 IGIAKTGSGKTAAFVLPMIVHIMD----------QPELQRDEG----PIGVICAPTRELA 314
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI EA KF+ G+++ YGG S +Q + L+ G +I+VATPGRL+D+++ + +++
Sbjct: 315 HQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMM 374
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+ YL LDEADRM D+GFE Q+R IV Q+ RQT+LFSAT P ++KLA + LS+
Sbjct: 375 RASYLVLDEADRMFDLGFEPQVRSIVGQIRPD----RQTLLFSATMPWKVEKLAREILSD 430
Query: 181 YIFLAVGRVGSSTELIVQKIELV-QDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
I + VG VG + E I Q + ++ D +K L LL + +D G L+F K
Sbjct: 431 PIRVTVGEVGMANEDITQVVNVIPSDAEK---LPWLLEKLPGMIDEGD---VLVFASKKA 484
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
D +E L+ N F A+HGDK Q R L+ FK G +L+ATDVA+RGLDI +
Sbjct: 485 TVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKT 544
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
V+NYD+ +D+ +VHRIGRTGRAG + + A LV L A Q VP L
Sbjct: 545 VVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPEL 604
Query: 360 GQFA 363
A
Sbjct: 605 TDLA 608
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 204/368 (55%), Gaps = 29/368 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A TGSGKT F P+I L+ I A P AL++ P+REL+
Sbjct: 138 IGIAFTGSGKTLVFVLPMIILALQEE-----------IMMPIAAGEGPIALVICPSRELA 186
Query: 61 CQIHAEATKFAHQT------GVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIER 114
Q + +F ++ ++ GG + QL ++KGV I+VATPGRL DI+ +
Sbjct: 187 KQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAK 246
Query: 115 ERVSLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLA 174
+++SL + L LDEADR++D+GFE IR + RQT+LFSAT P IQ A
Sbjct: 247 KKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFK----SQRQTLLFSATMPAKIQIFA 302
Query: 175 ADFLSNYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIF 234
L + + VGR G++ ++Q++E V+ K +L L C Q+ LIF
Sbjct: 303 TSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYL--LECLQKTT------PPVLIF 354
Query: 235 VETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDI 294
E K D + +L G A+AIHG K Q +R+ A+ FK G +LVATDVAS+GLD
Sbjct: 355 CENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDF 414
Query: 295 PHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQE 354
P + HVINYD+P +I +YVHRIGRTGR GK+G+AT F + N++ L +LQEAKQ
Sbjct: 415 PDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQR 474
Query: 355 VPAWLGQF 362
+P L +
Sbjct: 475 IPPVLAEL 482
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 210/368 (57%), Gaps = 28/368 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKT F P++ + + D P L+++PTREL
Sbjct: 232 IGVAKTGSGKTLGFVLPMLRHI----------KDQPPVEAGDG----PIGLVMAPTRELV 277
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDII---ERERV 117
QIH++ KF+ G++ V YGG+ + +Q+ L++G +I+V TPGR++DI+ +
Sbjct: 278 QQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKIT 337
Query: 118 SLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADF 177
+L ++ +L +DEADRM DMGFE QI +I+Q + RQT+LFSATFP ++ LA
Sbjct: 338 NLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPE----RQTVLFSATFPRQVETLARKV 393
Query: 178 LSNYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVET 237
L+ + + VG + I Q +E+ ++D+ L LL + ++ L+FV++
Sbjct: 394 LNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLG------EWSEKGKILVFVQS 447
Query: 238 KKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHV 297
++ DAL + ++ +P +++HG K Q +RE + FK +L+AT VA+RGLD+ +
Sbjct: 448 QEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKEL 507
Query: 298 AHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPA 357
V+N+D P DYVHR+GRTGRAG+ G A F S + + A LV+ L+ ++Q VP
Sbjct: 508 ELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISED-DAKYAPDLVKALELSEQPVPD 566
Query: 358 WLGQFAEG 365
L A+G
Sbjct: 567 DLKALADG 574
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 210/368 (57%), Gaps = 28/368 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKT F P++ + + D P L+++PTREL
Sbjct: 570 IGVAKTGSGKTLGFVLPMLRHI----------KDQPPVEAGDG----PIGLVMAPTRELV 615
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDII---ERERV 117
QIH++ KF+ G++ V YGG+ + +Q+ L++G +I+V TPGR++DI+ +
Sbjct: 616 QQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKIT 675
Query: 118 SLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADF 177
+L ++ +L +DEADRM DMGFE QI +I+Q + RQT+LFSATFP ++ LA
Sbjct: 676 NLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPE----RQTVLFSATFPRQVETLARKV 731
Query: 178 LSNYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVET 237
L+ + + VG + I Q +E+ ++D+ L LL + ++ L+FV++
Sbjct: 732 LNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLG------EWSEKGKILVFVQS 785
Query: 238 KKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHV 297
++ DAL + ++ +P +++HG K Q +RE + FK +L+AT VA+RGLD+ +
Sbjct: 786 QEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKEL 845
Query: 298 AHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPA 357
V+N+D P DYVHR+GRTGRAG+ G A F S + + A LV+ L+ ++Q VP
Sbjct: 846 ELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISED-DAKYAPDLVKALELSEQPVPD 904
Query: 358 WLGQFAEG 365
L A+G
Sbjct: 905 DLKALADG 912
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 199/341 (58%), Gaps = 28/341 (8%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TG+GKT AF PII + + +P+ L+L+PTREL+
Sbjct: 143 IARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPK---------FLVLAPTRELA 193
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q+ E + A + V YGG S Q L +GVD++V TPGR++D+IE + L
Sbjct: 194 KQVEKEIKESAPY--LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLG 251
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+++YL LDEAD+ML +GFE+ + I++ + P RQ+MLFSAT PT ++KLA +L N
Sbjct: 252 EVEYLVLDEADQMLAVGFEEAVESILENL----PTKRQSMLFSATMPTWVKKLARKYLDN 307
Query: 181 YIFLAVGRVGSSTELIVQKIEL----VQDTDKRNHLANLLCRQRANVDHGKQALTLIFVE 236
L + VG E + + I+L T KR L++L+ + K T++F +
Sbjct: 308 P--LNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITV------YAKGGKTIVFTQ 359
Query: 237 TKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPH 296
TK+ AD + + LS N A+HGD Q +RER L +F++G +LVATDVASRGLDIP+
Sbjct: 360 TKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPN 418
Query: 297 VAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKN 337
V VI+Y+LP D +VHR GRTGRAGK G A +S++
Sbjct: 419 VDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQK 459
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 199/341 (58%), Gaps = 28/341 (8%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TG+GKT AF PII + + +P+ L+L+PTREL+
Sbjct: 143 IARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPK---------FLVLAPTRELA 193
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q+ E + A + V YGG S Q L +GVD++V TPGR++D+IE + L
Sbjct: 194 KQVEKEIKESAPY--LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLG 251
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+++YL LDEAD+ML +GFE+ + I++ + P RQ+MLFSAT PT ++KLA +L N
Sbjct: 252 EVEYLVLDEADQMLAVGFEEAVESILENL----PTKRQSMLFSATMPTWVKKLARKYLDN 307
Query: 181 YIFLAVGRVGSSTELIVQKIEL----VQDTDKRNHLANLLCRQRANVDHGKQALTLIFVE 236
L + VG E + + I+L T KR L++L+ + K T++F +
Sbjct: 308 P--LNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITV------YAKGGKTIVFTQ 359
Query: 237 TKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPH 296
TK+ AD + + LS N A+HGD Q +RER L +F++G +LVATDVASRGLDIP+
Sbjct: 360 TKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPN 418
Query: 297 VAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKN 337
V VI+Y+LP D +VHR GRTGRAGK G A +S++
Sbjct: 419 VDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQK 459
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 199/341 (58%), Gaps = 28/341 (8%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TG+GKT AF PII + + +P+ L+L+PTREL+
Sbjct: 50 IARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPK---------FLVLAPTRELA 100
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q+ E + A + V YGG S Q L +GVD++V TPGR++D+IE + L
Sbjct: 101 KQVEKEIKESAPY--LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLG 158
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+++YL LDEAD+ML +GFE+ + I++ + P RQ+MLFSAT PT ++KLA +L N
Sbjct: 159 EVEYLVLDEADQMLAVGFEEAVESILENL----PTKRQSMLFSATMPTWVKKLARKYLDN 214
Query: 181 YIFLAVGRVGSSTELIVQKIEL----VQDTDKRNHLANLLCRQRANVDHGKQALTLIFVE 236
L + VG E + + I+L T KR L++L+ + K T++F +
Sbjct: 215 P--LNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITV------YAKGGKTIVFTQ 266
Query: 237 TKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPH 296
TK+ AD + + LS N A+HGD Q +RER L +F++G +LVATDVASRGLDIP+
Sbjct: 267 TKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPN 325
Query: 297 VAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKN 337
V VI+Y+LP D +VHR GRTGRAGK G A +S++
Sbjct: 326 VDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQK 366
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 179/293 (61%), Gaps = 25/293 (8%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKT A+ P + V + + D P LIL+PTREL+
Sbjct: 206 IGIAETGSGKTLAYLLPALVHV----------SAQPRLGQDDG----PIVLILAPTRELA 251
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
QI E+ KF ++GV+ YGGA Q+++L +GV+I++ATPGRL+D++E + +L
Sbjct: 252 VQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLK 311
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
++ YL LDEADRMLDMGFE QIRKIV Q+ RQT+L+SAT+P +++ LA FL +
Sbjct: 312 RVTYLVLDEADRMLDMGFEPQIRKIVSQIR----PDRQTLLWSATWPREVETLARQFLRD 367
Query: 181 YIFLAVGRVG-SSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
+G + + I Q IE+V +K N L LL + +D K LIFVETK+
Sbjct: 368 PYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLL---KQLMDGSK---ILIFVETKR 421
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGL 292
G D + L +G+PA+AIHGDK Q ER+R L FK G +PI+ ATDVA+RGL
Sbjct: 422 GCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 203/379 (53%), Gaps = 43/379 (11%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIP--RSDAFVAYPTALILSPTRE 58
+ + TGSGKTAAF P+++ + + +P R + P AL++ PTRE
Sbjct: 243 IGISATGSGKTAAFVLPMLAYISR-------------LPPMREENQTEGPYALVMVPTRE 289
Query: 59 LSCQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVS 118
L+ QI E KF+ G K V G SI KQ L +G +I++ATPGRL+D +ER V
Sbjct: 290 LAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVV 349
Query: 119 LSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGV---------------RQTMLFS 163
L++ YL LDEADRM+DM FE Q+ +++ MP + R T +FS
Sbjct: 350 LNQCNYLVLDEADRMIDMDFEPQVSEVLDV--MPCSNLKPEKEDEELEEKKIYRTTYMFS 407
Query: 164 ATFPTDIQKLAADFLSNYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANV 223
AT +++LA FL N + + +G +T+ I Q++ + +++DK + L L+
Sbjct: 408 ATMLLSVERLARKFLRNPVVVT---IGETTKFITQQVIMTKESDKFSRLKKLID------ 458
Query: 224 DHGKQALTLIFVETKKGADALEIWLSRNGFPAI-AIHGDKVQMERERALRSFKRGFTPIL 282
D G ++FV T+ D + L + G + +H K Q +R+ +L FK+ +L
Sbjct: 459 DLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVL 518
Query: 283 VATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAK 342
V TDV RGLDI +A VINYD+P + Y HRIGRTGRAGK+G+AT F + ++ +
Sbjct: 519 VTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTL-EDKDVFY 577
Query: 343 ALVEILQEAKQEVPAWLGQ 361
L + L E VP L +
Sbjct: 578 GLKQKLNECNSLVPPELAR 596
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 197/337 (58%), Gaps = 30/337 (8%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
A+TG+GKT AF PII ++K P L+L+PTREL+ Q+
Sbjct: 148 ARTGTGKTLAFGIPIIDKIIKYNAKHGRGRN-------------PLCLVLAPTRELARQV 194
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
E + A + + YGG I +Q++ L+ GVD+ V TPGR++D+++R ++LS+++
Sbjct: 195 EKEFRESAPS--LDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQ 252
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIF 183
++ LDEAD+ML +GF + + I++++ P RQ+M+FSAT P+ I+ L +L+N
Sbjct: 253 FVVLDEADQMLQVGFAEDVEIILEKL----PEKRQSMMFSATMPSWIRSLTKKYLNNP-- 306
Query: 184 LAVGRVGSSTELIVQKI---ELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
L V VG S + + I ++ D+ R + L +H K ++F +TK+
Sbjct: 307 LTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLV-----TEHAKGGKCIVFTQTKRD 361
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
AD L L+R+ F A+HGD Q +RER L F+ G ILVATDVA+RGLD+P+V +
Sbjct: 362 ADRLSYALARS-FKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLI 420
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKN 337
I+Y+LP + +VHR GRTGRAGK G A +S +++
Sbjct: 421 IHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQS 457
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 192/328 (58%), Gaps = 30/328 (9%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
A+TG+GKT AF PII ++K P L+L+PTREL+ Q+
Sbjct: 160 ARTGTGKTLAFGIPIIDKIIKFNAKHGRGKN-------------PQCLVLAPTRELARQV 206
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
E + A + + YGG I +Q++ L G+D+ V TPGR++D+++R ++LS+++
Sbjct: 207 EKEFRESAPS--LDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQ 264
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIF 183
++ LDEAD+ML +GF + + I+Q++ P RQ+M+FSAT P+ I+ L +L+N
Sbjct: 265 FVVLDEADQMLQVGFAEDVEIILQKL----PAKRQSMMFSATMPSWIRSLTKKYLNNP-- 318
Query: 184 LAVGRVGSSTELIVQKI---ELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
L + VG S + + I + D+ R + L ++ HGK ++F +TK+
Sbjct: 319 LTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKE-----HGKGGKCIVFTQTKRD 373
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
AD L L+++ + A+HGD Q +RER L F+ G ILVATDVA+RGLD+P+V V
Sbjct: 374 ADRLAFGLAKS-YKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLV 432
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLA 328
I+Y+LP + +VHR GRTGRAGK G A
Sbjct: 433 IHYELPNNTETFVHRTGRTGRAGKKGSA 460
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 193/368 (52%), Gaps = 57/368 (15%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKT F P++ + + D P L+++PTREL
Sbjct: 437 IGVAKTGSGKTLGFVLPMLRHI----------KDQPPVEAGDG----PIGLVMAPTRELV 482
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDII---ERERV 117
QI+++ KF+ G+ V YGG+ + +Q+ L++G +I+V TPGR++DI+ +
Sbjct: 483 QQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKIT 542
Query: 118 SLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADF 177
+L ++ YL +DEADRM DMGFE QI +IVQ + RQT+LFSATFP ++ LA
Sbjct: 543 NLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPD----RQTVLFSATFPRQVETLARKV 598
Query: 178 LSNYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVET 237
L+ + + VG + I Q +E+ ++++ + L LL + GK L+FV +
Sbjct: 599 LNKPVEIQVGGRSVVNKDITQLVEIRPESERFSRLLELLGEW---YEKGK---VLVFVRS 652
Query: 238 KKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHV 297
+ E+++ FK +L+AT VA+RGLD+ +
Sbjct: 653 Q-----------------------------EKSISDFKSDVCNLLIATSVAARGLDVKEL 683
Query: 298 AHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPA 357
V+N+D P DYVHR+GRTGRAG+ G A F S + + A LV+ L+ ++Q VP
Sbjct: 684 ELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISED-DAKYAPDLVKALELSEQPVPD 742
Query: 358 WLGQFAEG 365
+ AEG
Sbjct: 743 DVKAVAEG 750
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 175/332 (52%), Gaps = 19/332 (5%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ AQTGSGKT AF PI+ +L+ P AF A +LSPTREL+
Sbjct: 50 IGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDP---AFFA----CVLSPTRELA 102
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVD-IIERERVSL 119
QI + ++ V GG ++Q L K ++VATPGRL D + + + SL
Sbjct: 103 IQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSL 162
Query: 120 SKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS 179
+KYL LDEADR+L+ FE+ + +I++++ P R+T LFSAT ++KL L
Sbjct: 163 KSLKYLVLDEADRLLNEDFEKSLNQILEEI----PLERKTFLFSATMTKKVRKLQRACLR 218
Query: 180 NYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
N + + S+ + + Q+ V K +L +L ++ ++IF T
Sbjct: 219 NPVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEM-------PESTSMIFTRTCD 271
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
G L + L GF AI I G Q +R AL FK G ILV TDVASRGLDIP V
Sbjct: 272 GTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDV 331
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAF 331
VINYD+P + DY+HR+GRT RAG+SG+ +
Sbjct: 332 VINYDIPTNSKDYIHRVGRTARAGRSGVGISL 363
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 181/337 (53%), Gaps = 32/337 (9%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ AQTGSGKTAAF PI+ + + D + + AL+++PTREL+
Sbjct: 99 LGLAQTGSGKTAAFALPILHRLAE-----------------DPYGVF--ALVVTPTRELA 139
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERER---V 117
Q+ + ++ V GG ++ Q +L I++ TPGR+ ++E
Sbjct: 140 FQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPP 199
Query: 118 SLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADF 177
S+ K+L LDEADR+LD+GF+ ++R I Q + P RQT+LFSAT +++Q L +
Sbjct: 200 VFSRTKFLVLDEADRVLDVGFQDELRTIFQCL----PKSRQTLLFSATMTSNLQALL-EH 254
Query: 178 LSNYIFLAVGRVGSSTELIVQKIELVQDTD-KRNHLANLLCRQRANVDHGKQALTLIFVE 236
SN + G T + + + +D D K +L ++L + D G ++ +IFV
Sbjct: 255 SSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQME---DKGIRS-AMIFVS 310
Query: 237 TKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPH 296
T + L + L IA+H Q R AL FK G PIL+ATDVASRGLDIP
Sbjct: 311 TCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPT 370
Query: 297 VAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFS 333
V VINYD+PRD DYVHR+GRT RAG+ GLA + +
Sbjct: 371 VDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIIT 407
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 175/335 (52%), Gaps = 25/335 (7%)
Query: 2 ACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSC 61
A A TGSGKTAAF P + +L P+ V LIL+PTREL+
Sbjct: 209 ASAITGSGKTAAFALPTLERLL-------------FRPKR---VFATRVLILTPTRELAV 252
Query: 62 QIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERE-RVSLS 120
QIH+ A T +K + GG S+ +Q L DI+VATPGR++D + V L
Sbjct: 253 QIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLD 312
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+ L LDEADR+L GF +I ++V+ P RQTMLFSAT ++++L L+
Sbjct: 313 DLAVLILDEADRLLQTGFATEITELVRLC----PKRRQTMLFSATMTEEVKELVKLSLNK 368
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
+ L+ + +++ ++ T + N A LL + ++ +IF TK+
Sbjct: 369 PLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLL----SLCTRTFKSKVIIFSGTKQA 424
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
A L+I G A +HG+ Q +R +L F++ L+ATDVA+RGLDI V V
Sbjct: 425 AHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTV 484
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSN 335
INY PR+I YVHR+GRT RAG+ G A F + +
Sbjct: 485 INYACPREIDSYVHRVGRTARAGREGYAVTFVTDS 519
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 183/355 (51%), Gaps = 35/355 (9%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
AQ+G+GKTA FC SGVL+ + D + AL+L+PTREL+ QI
Sbjct: 83 AQSGTGKTATFC----SGVLQ---------------QLDFSLIQCQALVLAPTRELAQQI 123
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
GVK+ GG S+ + + L+ GV ++V TPGR+ D+++R+ + IK
Sbjct: 124 EKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIK 183
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIF 183
LDEAD ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S +
Sbjct: 184 MFVLDEADEMLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVR 239
Query: 184 LAVGRVGSSTELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKG 240
+ V R EL ++ I + + +K LC + A+T +IFV T++
Sbjct: 240 ILVKR----DELTLEGIKQFYVNVEKEEWKLETLCDLYETL-----AITQSVIFVNTRRK 290
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
D L + A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ V
Sbjct: 291 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 350
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEV 355
IN+DLP +Y+HRIGR+GR G+ G+A F + + + I E ++EV
Sbjct: 351 INFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLCLRTWPICCEGRKEV 405
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 180/360 (50%), Gaps = 23/360 (6%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A TGSGKTA+F PIIS R R+ P A++L+PTREL
Sbjct: 151 LASADTGSGKTASFLVPIIS-----RCTTYHSEHPSDQRRN------PLAMVLAPTRELC 199
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q+ +A K + GG + QL +++GV++++ TPGR+VD++ + + L
Sbjct: 200 VQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELD 259
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
I LDE D ML GF Q+ +I Q + P Q +LFSAT +++K+
Sbjct: 260 NIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKE 314
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
I +++G + + Q V K+ L ++L Q +H K +++V ++ G
Sbjct: 315 IILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQ----NHFKPP-AVVYVSSRVG 369
Query: 241 ADALEIWLS-RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
AD L ++ G A++IHG+K ER + SF G P+LV+T V RG+D+ V
Sbjct: 370 ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQ 429
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
VI +D+P I +Y+H IGR R G+ G A F + + + LV L+ + +P L
Sbjct: 430 VIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR-NLFPDLVAALKSSGAAIPKEL 488
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 180/360 (50%), Gaps = 23/360 (6%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A TGSGKTA+F PIIS R R+ P A++L+PTREL
Sbjct: 151 LASADTGSGKTASFLVPIIS-----RCTTYHSEHPSDQRRN------PLAMVLAPTRELC 199
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q+ +A K + GG + QL +++GV++++ TPGR+VD++ + + L
Sbjct: 200 VQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELD 259
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
I LDE D ML GF Q+ +I Q + P Q +LFSAT +++K+
Sbjct: 260 NIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKE 314
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
I +++G + + Q V K+ L ++L Q +H K +++V ++ G
Sbjct: 315 IILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQ----NHFKPP-AVVYVSSRVG 369
Query: 241 ADALEIWLS-RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
AD L ++ G A++IHG+K ER + SF G P+LV+T V RG+D+ V
Sbjct: 370 ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQ 429
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
VI +D+P I +Y+H IGR R G+ G A F + + + LV L+ + +P L
Sbjct: 430 VIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR-NLFPDLVAALKSSGAAIPKEL 488
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 171/336 (50%), Gaps = 22/336 (6%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A TGSGKTA+F PIIS R R+ P A++L+PTREL
Sbjct: 14 LASADTGSGKTASFLVPIIS-----RCTTYHSEHPSDQRRN------PLAMVLAPTRELC 62
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q+ +A K + GG + QL +++GV++++ TPGR+VD++ + + L
Sbjct: 63 VQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELD 122
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
I LDE D ML GF Q+ +I Q + P Q +LFSAT +++K+
Sbjct: 123 NIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKE 177
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
I +++G + + Q V K+ L ++L Q +H K +++V ++ G
Sbjct: 178 IILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQ----NHFKPP-AVVYVSSRVG 232
Query: 241 ADALEIWLS-RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
AD L ++ G A++IHG+K ER + SF G P+LV+T V RG+D+ V
Sbjct: 233 ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQ 292
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSN 335
VI +D+P I +Y+H IGR R G+ G A F + +
Sbjct: 293 VIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNED 328
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 174/341 (51%), Gaps = 35/341 (10%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
AQ+G+GKTA FC SGVL+ + D + AL+L+PTREL+ QI
Sbjct: 85 AQSGTGKTATFC----SGVLQ---------------QLDISLVQCQALVLAPTRELAQQI 125
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
GVK GG S+ + + L+ GV ++V TPGR+ D++ R+ + IK
Sbjct: 126 EKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIK 185
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIF 183
LDEAD ML GF+ QI I Q + P Q +FSAT P + ++ F++ +
Sbjct: 186 MFVLDEADEMLSRGFKDQIYDIFQLL----PSKVQVGVFSATMPPEALEITRKFMNKPVR 241
Query: 184 LAVGRVGSSTELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKG 240
+ V R EL ++ I + + DK LC + A+T +IFV T++
Sbjct: 242 ILVKR----DELTLEGIKQFYVNVDKEEWKLETLCDLYETL-----AITQSVIFVNTRRK 292
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
D L + A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ V
Sbjct: 293 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 352
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIA 341
IN+DLP +Y+HRIGR+GR G+ G+A F +S +A
Sbjct: 353 INFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMA 393
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 176/335 (52%), Gaps = 35/335 (10%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
AQ+G+GKTA FC SGVL+ + D + AL+L+PTREL+ QI
Sbjct: 73 AQSGTGKTATFC----SGVLQ---------------QLDFSLIQCQALVLAPTRELAQQI 113
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
GVK+ GG S+ + + L+ GV ++V TPGR+ D+++R+ + IK
Sbjct: 114 EKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIK 173
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIF 183
LDEAD ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S +
Sbjct: 174 MFVLDEADEMLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVR 229
Query: 184 LAVGRVGSSTELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKG 240
+ V R EL ++ I + + +K LC + A+T +IFV T++
Sbjct: 230 ILVKR----DELTLEGIKQFYVNVEKEEWKLETLCDLYETL-----AITQSVIFVNTRRK 280
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
D L + A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ V
Sbjct: 281 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 340
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSN 335
IN+DLP +Y+HRIGR+GR G+ G+A F + +
Sbjct: 341 INFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 375
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 176/335 (52%), Gaps = 35/335 (10%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
AQ+G+GKTA FC SGVL+ + D + AL+L+PTREL+ QI
Sbjct: 78 AQSGTGKTATFC----SGVLQ---------------QLDFSLIQCQALVLAPTRELAQQI 118
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
GVK+ GG S+ + + L+ GV ++V TPGR+ D+++R+ + IK
Sbjct: 119 EKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIK 178
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIF 183
LDEAD ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S +
Sbjct: 179 MFVLDEADEMLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVR 234
Query: 184 LAVGRVGSSTELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKG 240
+ V R EL ++ I + + +K LC + A+T +IFV T++
Sbjct: 235 ILVKR----DELTLEGIKQFYVNVEKEEWKLETLCDLYETL-----AITQSVIFVNTRRK 285
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
D L + A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ V
Sbjct: 286 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 345
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSN 335
IN+DLP +Y+HRIGR+GR G+ G+A F + +
Sbjct: 346 INFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 380
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 176/335 (52%), Gaps = 35/335 (10%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
AQ+G+GKTA FC SGVL+ + D + AL+L+PTREL+ QI
Sbjct: 83 AQSGTGKTATFC----SGVLQ---------------QLDFSLIQCQALVLAPTRELAQQI 123
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
GVK+ GG S+ + + L+ GV ++V TPGR+ D+++R+ + IK
Sbjct: 124 EKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIK 183
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIF 183
LDEAD ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S +
Sbjct: 184 MFVLDEADEMLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVR 239
Query: 184 LAVGRVGSSTELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKG 240
+ V R EL ++ I + + +K LC + A+T +IFV T++
Sbjct: 240 ILVKR----DELTLEGIKQFYVNVEKEEWKLETLCDLYETL-----AITQSVIFVNTRRK 290
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
D L + A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ V
Sbjct: 291 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 350
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSN 335
IN+DLP +Y+HRIGR+GR G+ G+A F + +
Sbjct: 351 INFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 385
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 183/359 (50%), Gaps = 30/359 (8%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
ACA TGSGKT AF P++ + + P +D A+ILSP REL+
Sbjct: 182 FACAPTGSGKTFAFICPMLIKLKR--------------PSTDGI----RAVILSPARELA 223
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q E K + I + +VK + D+L++TP RL I+ +++ LS
Sbjct: 224 AQTAREGKKLIKGSNFHIRLMT--KPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLS 281
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
K++YL LDE+D++ + +QI +V+ P +R LFSAT P +++LA + +
Sbjct: 282 KVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSI-IRS--LFSATLPDSVEELARSIMHD 338
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKG 240
+ + +GR +++E + QK+ + + L R + LIFV++K+
Sbjct: 339 AVRVIIGRKNTASETVKQKLVFAGSEEGK------LLALRQSFAESLNPPVLIFVQSKER 392
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
A L L A IH D ERE A+ F+ G +L+ATDV +RG+D + V
Sbjct: 393 AKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCV 452
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
INYD P + Y+HRIGR+GRAG+SG A F+ + ++ P + + + + EVP+W+
Sbjct: 453 INYDFPDSASAYIHRIGRSGRAGRSGEAITFY-TEQDVPFLRNIANTMMSSGCEVPSWI 510
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 175/333 (52%), Gaps = 35/333 (10%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
AQ+G+GKTA FC SGVL+ + D + AL+L+PTREL+ QI
Sbjct: 83 AQSGTGKTATFC----SGVLQ---------------QLDYALLQCQALVLAPTRELAQQI 123
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
GVK+ GG S+ + + L+ GV ++V TPGR+ D++ R+ + IK
Sbjct: 124 EKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIK 183
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIF 183
LDEAD ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S +
Sbjct: 184 MFVLDEADEMLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVR 239
Query: 184 LAVGRVGSSTELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKG 240
+ V R EL ++ I + + +K + LC + A+T +IFV T++
Sbjct: 240 ILVKR----DELTLEGIKQFYVNVEKEDWKLETLCDLYETL-----AITQSVIFVNTRRK 290
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
D L + A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ V
Sbjct: 291 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 350
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFS 333
IN+DLP +Y+HRIGR+GR G+ G+A F +
Sbjct: 351 INFDLPTQPENYLHRIGRSGRFGRKGVAINFVT 383
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 175/333 (52%), Gaps = 35/333 (10%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
AQ+G+GKTA FC SGVL+ + D + AL+L+PTREL+ QI
Sbjct: 78 AQSGTGKTATFC----SGVLQ---------------QLDYALLQCQALVLAPTRELAQQI 118
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
GVK+ GG S+ + + L+ GV ++V TPGR+ D++ R+ + IK
Sbjct: 119 EKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIK 178
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIF 183
LDEAD ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S +
Sbjct: 179 MFVLDEADEMLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVR 234
Query: 184 LAVGRVGSSTELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKG 240
+ V R EL ++ I + + +K + LC + A+T +IFV T++
Sbjct: 235 ILVKR----DELTLEGIKQFYVNVEKEDWKLETLCDLYETL-----AITQSVIFVNTRRK 285
Query: 241 ADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 300
D L + A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ V
Sbjct: 286 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 345
Query: 301 INYDLPRDIADYVHRIGRTGRAGKSGLATAFFS 333
IN+DLP +Y+HRIGR+GR G+ G+A F +
Sbjct: 346 INFDLPTQPENYLHRIGRSGRFGRKGVAINFVT 378
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 172/334 (51%), Gaps = 18/334 (5%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
A+TG GKT AF PI+ ++ R + P+ L+L PTREL+ Q+
Sbjct: 140 ARTGQGKTLAFVLPILESLVNGPAKSK---------RKMGYGRSPSVLVLLPTRELAKQV 190
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
A+ + G+ YGG S Q L++GVDI+V TPGR+ D IER+ + S ++
Sbjct: 191 AADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQ 250
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIF 183
+ LDEAD ML MGF + + I+ ++ QT+LFSAT P+ ++ ++ FL
Sbjct: 251 FRVLDEADEMLRMGFVEDVELILGKVEDSTK--VQTLLFSATLPSWVKNISNRFLKRDQ- 307
Query: 184 LAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADA 243
+ VG+ + + + +A L+ + G Q T+IF ETK
Sbjct: 308 KTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISCYSSGGQ--TIIFAETKVQVSE 365
Query: 244 LEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINY 303
L L + A+HG+ Q +RE L F+ G LVAT+VA+RGLDI V +I
Sbjct: 366 LSGLLDGSR----ALHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQC 421
Query: 304 DLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKN 337
+ PR++ Y+HR GRTGRAG +G+A + S K+
Sbjct: 422 EPPREVEAYIHRSGRTGRAGNTGVAVTLYDSRKS 455
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 169/336 (50%), Gaps = 31/336 (9%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A AQ+G+GKT+ + V D ALILSPTREL+
Sbjct: 76 IAQAQSGTGKTSMIALSVCQVV-------------------DTSSREVQALILSPTRELA 116
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q ++ GG S+ + ++ LE GV ++ TPGR+ D+I+R +
Sbjct: 117 TQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTR 176
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
IK L LDE+D ML GF+ QI + + ++PP Q L SAT P +I ++ + F++
Sbjct: 177 AIKLLILDESDEMLSRGFKDQIYDVYR--YLPPD--LQVCLVSATLPHEILEMTSKFMTE 232
Query: 181 YIFLAVGRVGSSTELIVQKIELVQDTD-KRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
+ + V R + E I Q V+ + K + L +L D +IF TK+
Sbjct: 233 PVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLY-------DTLTITQAVIFCNTKR 285
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
D L + + F ++HGD Q ER+ + F+ G + +L+ TDV +RG+D+ V+
Sbjct: 286 KVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSL 345
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSN 335
VINYDLP + Y+HRIGR+GR G+ G+A F S+
Sbjct: 346 VINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD 381
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 190/367 (51%), Gaps = 53/367 (14%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYP---TALILSPTRELS 60
A TGSGKT AF P++ + RS +F P +I+SPTRELS
Sbjct: 60 AATGSGKTLAFVVPLVE----------------ILRRSTSFPPKPHQVMGVIISPTRELS 103
Query: 61 CQIHAEATKFAHQ-TGVKIVVAYGGASIVKQLQNLEK-GVDILVATPGRLVDIIER-ERV 117
QI+ A F V V+ GG + ++ +E+ G ++L+ TPGRL DI+ER E +
Sbjct: 104 TQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPGRLSDIMERMEIL 163
Query: 118 SLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADF 177
++ L LDEADR+L+MGF++Q+ I+ ++ P R+T LFSAT +++LA
Sbjct: 164 DFRNLEILILDEADRLLEMGFQRQVNYIISRL----PKQRRTGLFSATQTEGVEELAKAG 219
Query: 178 LSNYIFLAV---GRVGSSTELIVQK------IELVQ-DTDKRN-HLANLLCRQRANVDHG 226
L N + + V + SS +L K +E ++ + DK++ L +LL + N D
Sbjct: 220 LRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKKSSQLVDLLIK---NSDKK 276
Query: 227 KQALTLIFVETKKGADALEIWLSR----NGFPAIAIHGDKVQMERERALRSFKRGFTPIL 282
++F T D + LS+ I IHGD Q R++AL SF + + L
Sbjct: 277 ----LIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALASFTKASSGAL 332
Query: 283 VATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAK 342
+ TDVA+RGLDIP + +V+ YD P+D + HR GRT R G+ G A F P +
Sbjct: 333 LCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFLL-----PKEE 387
Query: 343 ALVEILQ 349
A VE ++
Sbjct: 388 AYVEFMR 394
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 171/339 (50%), Gaps = 37/339 (10%)
Query: 1 MACAQTGSGKTAAFCFPIISGV-LKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTREL 59
+A AQ+G+GKT+ + V + +R L+LSP+REL
Sbjct: 63 IAQAQSGTGKTSMIAISVCQIVNISSRKVQ--------------------VLVLSPSREL 102
Query: 60 SCQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSL 119
+ Q T ++ GG SI + ++ LE+GV + TPGR+ D+I+R +
Sbjct: 103 ASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQT 162
Query: 120 SKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS 179
+K L LDE+D ML G + QI + + + P Q L SAT P +I ++ F++
Sbjct: 163 KAVKLLVLDESDEMLSKGLKDQIYDVYRAL----PHDIQVCLISATLPQEILEMTEKFMT 218
Query: 180 NYIFLAVGRVGSSTELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVE 236
+ + + V EL ++ I + D DK + LC +G+ + +IF
Sbjct: 219 DPVRILV----KPDELTLEGIKQYYVDVDKEEWKFDTLCDL-----YGRLTINQAIIFCN 269
Query: 237 TKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPH 296
T++ D L + + F ++HGDK Q ER+ + F+ + +L+A+DV +RG+D+
Sbjct: 270 TRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQT 329
Query: 297 VAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSN 335
V+HVINYD+P + Y+HRIGR GR G+ G+A F S+
Sbjct: 330 VSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSS 368
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 188/381 (49%), Gaps = 41/381 (10%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TG+GKT AF P I V+K+ I L++ PTREL+
Sbjct: 423 LAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPII-----------VLVVCPTRELA 471
Query: 61 CQIHAEAT---KFAHQTGVKIVVAYGGASIVKQLQNLEKG-VDILVATPGRLVDIIERER 116
Q AEA K+ GV++V+ GG + + + ++ ILVATPGRL D IE
Sbjct: 472 SQAAAEANTLLKYHPSIGVQVVI--GGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTS 529
Query: 117 ---VSLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKL 173
L +K L LDEAD +LDMGF + I +I+ + P RQT LFSAT P +++++
Sbjct: 530 GFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAV----PKQRQTFLFSATVPEEVRQI 585
Query: 174 AADFLS-NYIFLAVGRVGS-STELIVQKIELVQDTDKRNHLANLLCRQRA--NVDHGKQA 229
L ++ F+ + GS T V ++ ++ D+ L ++L ++ NVD+
Sbjct: 586 CHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYK--- 642
Query: 230 LTLIFVETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVAS 289
+IF T + LS+ IH K Q R R F++ ILV +DV++
Sbjct: 643 -VIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSA 701
Query: 290 RGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATA--------FFSSNKNPPIA 341
RG+D P V+ V+ LP D Y+HR+GRTGR GK G F SS K+ PI
Sbjct: 702 RGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVKDLPIT 761
Query: 342 KA-LVEILQEAKQEVPAWLGQ 361
K+ L I EA + V L Q
Sbjct: 762 KSPLPPIDPEAVKRVQKGLSQ 782
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 191/381 (50%), Gaps = 41/381 (10%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYP--TALILSPTRE 58
+A A+TG+GKT AF P I V+KA P + +P L++ PTRE
Sbjct: 121 LAKAKTGTGKTVAFLLPSIEAVIKA-------------PPASRDNRHPPIIVLVVCPTRE 167
Query: 59 LSCQIHAEAT---KFAHQTGVKIVVAYGGASIVKQLQNLEKG-VDILVATPGRLVDIIER 114
L+CQ AEA K+ GV++V+ GG + + + L+K ILVATPGRL D I+
Sbjct: 168 LACQAAAEANILLKYHPSIGVQVVI--GGTKLPTEQRRLQKSPCQILVATPGRLKDHIDN 225
Query: 115 ER---VSLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQ 171
L +K L LDEAD +LDMGF ++I +I+ + P RQT LFSAT +++
Sbjct: 226 TSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAV----PKQRQTFLFSATVSDEVR 281
Query: 172 KLAADFLS-NYIFLAVGRVGS-STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQA 229
++ L ++ F+ + G+ T V ++ ++ D+ L L ++ + G +
Sbjct: 282 QICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLDRHFSLLYGLLKKHITDNVGYKV 341
Query: 230 LTLIFVETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVAS 289
+ IF T + L + IH K Q R R F++ + ILV +DV++
Sbjct: 342 I--IFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDVSA 399
Query: 290 RGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATA--------FFSSNKNPPIA 341
RG+D P V+ V+ LP D Y+HR+GRTGR GK G F SS K+ PI
Sbjct: 400 RGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFLSSVKDLPIT 459
Query: 342 K-ALVEILQEAKQEVPAWLGQ 361
K +L I EA ++V L Q
Sbjct: 460 KSSLPPIDHEAVKKVQKGLIQ 480
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 172/342 (50%), Gaps = 41/342 (11%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYP---TALILSPTRELS 60
A TGSGKT AF P I I RS+++ P +I+SPTRELS
Sbjct: 60 AATGSGKTLAFLLPFIE----------------IIRRSNSYPPKPHQVMGVIISPTRELS 103
Query: 61 CQIHAEATKFAHQT-GVKIVVAYGGASIVKQLQNLEK-GVDILVATPGRLVDIIER-ERV 117
QIH A F V V+ GG + + LE+ G ++L+ TPGRL D+++R E +
Sbjct: 104 AQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFL 163
Query: 118 SLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADF 177
++ L LDEADR+LDMGF++Q+ I+ ++ P R+T LFSAT + LA
Sbjct: 164 DFRNLEILILDEADRLLDMGFQKQVNYIISRL----PKQRRTGLFSATQTQAVADLAKAG 219
Query: 178 LSNYIFLAVG---RVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIF 234
L N + + G + +S+ L + ++ D K + L +LL K ++F
Sbjct: 220 LRNAMEVISGAESKSKTSSGLYCEYLKCEAD-QKSSQLVHLLI-------ENKNKKLVVF 271
Query: 235 VETKKGADALEIWLSR----NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASR 290
T D + LS+ + HG Q R+ AL SF + +L+ TDVA+R
Sbjct: 272 FMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASSGVLLCTDVAAR 331
Query: 291 GLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFF 332
GLDIP + +V+ YD P+D ++HR+GRT R + G A F
Sbjct: 332 GLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFL 373
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 176/339 (51%), Gaps = 27/339 (7%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TGSGKTAAF P++ + +P+ ALILSPTR+L+
Sbjct: 69 VAMARTGSGKTAAFLIPMLEKL------------KQHVPQGGV-----RALILSPTRDLA 111
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDII-ERERVSL 119
Q + T +++ + GG S+ Q + L KG D+++ATPGRL+ ++ E + ++L
Sbjct: 112 EQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTL 171
Query: 120 SKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS 179
++Y+ DEAD + MGF +Q+ +I+ Q+ RQT+LFSAT P+ + + A L
Sbjct: 172 RTVEYVVFDEADSLFGMGFAEQLHQILTQLSEN----RQTLLFSATLPSALAEFAKAGLR 227
Query: 180 NYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
+ + + + V+ +K + L L+ R ++ +Q TLIFV TK
Sbjct: 228 EPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLYLV---REHISSDQQ--TLIFVSTKH 282
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
+ + +GD Q R+ + F+ T +L+ TD+A+RG+DIP + +
Sbjct: 283 HVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDN 342
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNP 338
VIN+D P +VHR+GR RAG++G A +F + P
Sbjct: 343 VINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMP 381
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 173/362 (47%), Gaps = 34/362 (9%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+ G+GKTAAFC P++ + D A+I+ PTREL+
Sbjct: 172 LARAKNGTGKTAAFCIPVLEKI-------------------DQDNNVIQAVIIVPTRELA 212
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q + ++++V GG S+ + L + V +LV TPGR++D+ ++ L
Sbjct: 213 LQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLK 272
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
L +DEAD++L F+ + ++ + P RQ ++FSATFP ++ FL+N
Sbjct: 273 DCSVLVMDEADKLLSQEFQPSVEHLISFL----PESRQILMFSATFPVTVKDFKDRFLTN 328
Query: 181 -YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
Y+ + + + + I Q V++ K + L L + + N ++IF +
Sbjct: 329 PYVINLMDEL--TLKGITQFYAFVEERQKIHCLNTLFSKLQIN-------QSIIFCNSVN 379
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
+ L ++ G+ IH +Q R R F+ G LV TD+ +RG+DI V
Sbjct: 380 RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV 439
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
VIN+D P++ Y+HR+GR+GR G GLA + + + E+ E KQ +P +
Sbjct: 440 VINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ-IPPHI 498
Query: 360 GQ 361
Q
Sbjct: 499 DQ 500
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 173/362 (47%), Gaps = 34/362 (9%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+ G+GKTAAFC P++ + D A+I+ PTREL+
Sbjct: 172 LARAKNGTGKTAAFCIPVLEKI-------------------DQDNNVIQAVIIVPTRELA 212
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q + ++++V GG S+ + L + V +LV TPGR++D+ ++ L
Sbjct: 213 LQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLK 272
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
L +DEAD++L F+ + ++ + P RQ ++FSATFP ++ FL+N
Sbjct: 273 DCSVLVMDEADKLLSQEFQPSVEHLISFL----PESRQILMFSATFPVTVKDFKDRFLTN 328
Query: 181 -YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
Y+ + + + + I Q V++ K + L L + + N ++IF +
Sbjct: 329 PYVINLMDEL--TLKGITQFYAFVEERQKIHCLNTLFSKLQIN-------QSIIFCNSVN 379
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
+ L ++ G+ IH +Q R R F+ G LV TD+ +RG+DI V
Sbjct: 380 RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV 439
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
VIN+D P++ Y+HR+GR+GR G GLA + + + E+ E KQ +P +
Sbjct: 440 VINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ-IPPHI 498
Query: 360 GQ 361
Q
Sbjct: 499 DQ 500
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 162/329 (49%), Gaps = 33/329 (10%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+ G+GKT AFC P + + P ++ A+IL PTREL+
Sbjct: 195 LARAKNGTGKTGAFCIPTLEKI---------------DPENNVI----QAVILVPTRELA 235
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q + + ++++V GG S+ + L + V +LV TPGR++D+ ++ L
Sbjct: 236 LQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLK 295
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
L +DEAD++L + F+ I +++Q + P RQ ++FSATFP ++ +L
Sbjct: 296 DCAMLVMDEADKLLSVEFQPSIEELIQFL----PESRQILMFSATFPVTVKSFKDRYLKK 351
Query: 181 -YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
YI + ++ + + Q V++ K + L L + + N ++IF +
Sbjct: 352 PYIINLMDQL--TLMGVTQYYAFVEERQKVHCLNTLFSKLQINQ-------SIIFCNSVN 402
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
+ L ++ G+ IH VQ R R F+ G LV TD+ +RG+DI V
Sbjct: 403 RVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV 462
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLA 328
VIN+D PR Y+HR+GR+GR G GLA
Sbjct: 463 VINFDFPRTSESYLHRVGRSGRFGHLGLA 491
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 182/365 (49%), Gaps = 46/365 (12%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYP--TALILSPTRE 58
+A A+TG+GKT AF P I V+K+ P + P AL++ PTRE
Sbjct: 361 LAKAKTGTGKTVAFLLPSIEVVVKS-------------PPTSPDNKRPPILALVICPTRE 407
Query: 59 LSCQIHAEAT---KFAHQTGVKIVVAYGGASIVKQLQNLEKG-VDILVATPGRLVDIIER 114
L+ Q EA K+ GV++V+ GG + + + ++ ILVATPGRL D IE
Sbjct: 408 LANQAATEANTLLKYHPSIGVQVVI--GGTRLGLEQKRMQTNPCQILVATPGRLKDHIEN 465
Query: 115 E---RVSLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQ 171
L +K L LDEAD +LDMGF + I +I+ + P RQT LFSAT P +++
Sbjct: 466 TPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAV----PKERQTFLFSATVPEEVR 521
Query: 172 KLAADFLS-NYIFLAVGRVGS-STELIVQKIELVQDTDKRNHLANLLCRQR--ANVDHGK 227
++ L ++ F+ G+ T V+++ ++ D+ L L R+ NVD+
Sbjct: 522 QICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSLLYTLLREHIMGNVDYKV 581
Query: 228 QALTLIFVETKKGADAL-EIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATD 286
+ TK AD L E+ L+ IH K Q R R F++ ILV +D
Sbjct: 582 IVFCTTAMVTKLVADLLGELNLN-----VREIHSRKPQSYRTRVSNEFRKSKGLILVTSD 636
Query: 287 VASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATA--------FFSSNKNP 338
V++RG+D P V V+ LP+D Y+HR+GRTGR GK G F SS K+
Sbjct: 637 VSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLAPWEEYFLSSLKDL 696
Query: 339 PIAKA 343
PI K+
Sbjct: 697 PITKS 701
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 161/329 (48%), Gaps = 33/329 (10%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+ G+GKT AFC P++ + P ++ A+IL PTREL+
Sbjct: 165 LARAKNGTGKTGAFCIPVLEKI---------------DPNNNVI----QAMILVPTRELA 205
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q + + ++++V GG S+ + L + V +LV TPGR++D+ ++ L
Sbjct: 206 LQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLK 265
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
L +DEAD++L F+ + +++Q + P RQ ++FSATFP ++ L
Sbjct: 266 DCAMLVMDEADKLLSAEFQPSLEELIQFL----PQNRQFLMFSATFPVTVKAFKDRHLRK 321
Query: 181 -YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
Y+ + ++ + + Q V++ K + L L + + N ++IF +
Sbjct: 322 PYVINLMDQL--TLMGVTQYYAFVEERQKVHCLNTLFSKLQINQ-------SIIFCNSVN 372
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
+ L ++ G+ IH VQ R R F+ G LV TD+ +RG+DI V
Sbjct: 373 RVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNV 432
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLA 328
VIN+D PR Y+HR+GR+GR G GLA
Sbjct: 433 VINFDFPRTSESYLHRVGRSGRFGHLGLA 461
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 161/329 (48%), Gaps = 33/329 (10%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+ G+GKT AFC P++ + P ++ A+IL PTREL+
Sbjct: 165 LARAKNGTGKTGAFCIPVLEKI---------------DPNNNVI----QAMILVPTRELA 205
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q + + ++++V GG S+ + L + V +LV TPGR++D+ ++ L
Sbjct: 206 LQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLK 265
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
L +DEAD++L F+ + +++Q + P RQ ++FSATFP ++ L
Sbjct: 266 DCAMLVMDEADKLLSAEFQPSLEELIQFL----PQNRQFLMFSATFPVTVKAFKDRHLRK 321
Query: 181 -YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
Y+ + ++ + + Q V++ K + L L + + N ++IF +
Sbjct: 322 PYVINLMDQL--TLMGVTQYYAFVEERQKVHCLNTLFSKLQINQ-------SIIFCNSVN 372
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
+ L ++ G+ IH VQ R R F+ G LV TD+ +RG+DI V
Sbjct: 373 RVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNV 432
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLA 328
VIN+D PR Y+HR+GR+GR G GLA
Sbjct: 433 VINFDFPRTSESYLHRVGRSGRFGHLGLA 461
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 175/360 (48%), Gaps = 34/360 (9%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
A++G GKTA F + + + +AL+L TREL+ QI
Sbjct: 90 AKSGMGKTAVFVLSTLQQI-------------------EPSPGQVSALVLCHTRELAYQI 130
Query: 64 HAEATKFA-HQTGVKIVVAYGGASIVKQLQNLEKGV--DILVATPGRLVDIIERERVSLS 120
E +F+ + K+ V YGG +I K ++L K I+V TPGR++ + + +SL
Sbjct: 131 CNEFVRFSTYLPDTKVSVFYGGVNI-KIHKDLLKNECPHIVVGTPGRVLALAREKDLSLK 189
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+++ LDE D+ML+ +R+ VQ++ P +Q M+FSAT +I+ + F+ +
Sbjct: 190 NVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
Query: 181 YIFLAVGRVGSST-ELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
+ + V T +VQ + + +K L +LL D +IFV++
Sbjct: 247 PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLL-------DALDFNQVVIFVKSVS 299
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
A L L FP+I IH Q ER +SFK G ILVATD+ RG+DI V
Sbjct: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 359
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
VINYD+P Y+HR+GR GR G GLA F +S + + + E + +E+P +
Sbjct: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 419
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 175/360 (48%), Gaps = 34/360 (9%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
A++G GKTA F + + + +AL+L TREL+ QI
Sbjct: 90 AKSGMGKTAVFVLSTLQQI-------------------EPSPGQVSALVLCHTRELAYQI 130
Query: 64 HAEATKFA-HQTGVKIVVAYGGASIVKQLQNLEKGV--DILVATPGRLVDIIERERVSLS 120
E +F+ + K+ V YGG +I K ++L K I+V TPGR++ + + +SL
Sbjct: 131 CNEFVRFSTYLPDTKVSVFYGGVNI-KIHKDLLKNECPHIVVGTPGRVLALAREKDLSLK 189
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+++ LDE D+ML+ +R+ VQ++ P +Q M+FSAT +I+ + F+ +
Sbjct: 190 NVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
Query: 181 YIFLAVGRVGSST-ELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
+ + V T +VQ + + +K L +LL D +IFV++
Sbjct: 247 PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLL-------DALDFNQVVIFVKSVS 299
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
A L L FP+I IH Q ER +SFK G ILVATD+ RG+DI V
Sbjct: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 359
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
VINYD+P Y+HR+GR GR G GLA F +S + + + E + +E+P +
Sbjct: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 419
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 177/360 (49%), Gaps = 34/360 (9%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
A++G GKTA F + + + +AL+L TREL+ QI
Sbjct: 7 AKSGMGKTAVFVLSTLQQI-------------------EPSPGQVSALVLCHTRELAYQI 47
Query: 64 HAEATKFA-HQTGVKIVVAYGGASIVKQLQNLEKGV--DILVATPGRLVDIIERERVSLS 120
E +F+ + K+ V YGG +I K ++L K I+V TPGR++ + + +SL
Sbjct: 48 CNEFVRFSTYLPDTKVSVFYGGVNI-KIHKDLLKNECPHIVVGTPGRVLALAREKDLSLK 106
Query: 121 KIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN 180
+++ LDE D+ML+ +R+ VQ++ P +Q M+FSAT +I+ + F+ +
Sbjct: 107 NVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 163
Query: 181 YIFLAVGRVGSST-ELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
+ + V T +VQ + + +K L +LL +D + +IFV++
Sbjct: 164 PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLL----DALDFNQ---VVIFVKSVS 216
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
A L L FP+I IH Q ER +SFK G ILVATD+ RG+DI V
Sbjct: 217 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 276
Query: 300 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 359
VINYD+P Y+HR+GR GR G GLA F +S + + + E + +E+P +
Sbjct: 277 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 336
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 185/371 (49%), Gaps = 42/371 (11%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKT AF P + + + + PR+ V L++ PTREL+
Sbjct: 195 LGAARTGSGKTLAFLIPAVELLYRVKFT----------PRNGTGV-----LVICPTRELA 239
Query: 61 CQ---IHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERV 117
Q + E K+ QT K++ GG + + L KGV++LVATPGRL+D +E
Sbjct: 240 IQSYGVAKELLKYHSQTVGKVI---GGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNG 296
Query: 118 SLSK-IKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAAD 176
+ K +K+L +DEADR+L+ FE+ ++KI+ + P RQT LFSAT ++ LA
Sbjct: 297 FIFKNLKFLVMDEADRILEQNFEEDLKKILNLL----PKTRQTSLFSATQSAKVEDLARV 352
Query: 177 FLSNYIFLAV--GRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIF 234
L++ +++ V GR + E + Q +V + L L R + GK+ + + F
Sbjct: 353 SLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQ-----GKKKIMVFF 407
Query: 235 VETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDI 294
K E++ F + I G Q +R F + T IL+ T+VA+RGLD
Sbjct: 408 STCKSTKFHAELFRYIK-FDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDF 466
Query: 295 PHVAHVINYDLPRDIADYVHRIGRTGRA-GKSGLATAFFSSNKNPPIAKALVEILQEAKQ 353
PHV ++ YD P + DY+HR+GRT R G G A + P ++ L+ AK
Sbjct: 467 PHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLT-----PQELKFIQYLKAAK- 520
Query: 354 EVPAWLGQFAE 364
+P +F E
Sbjct: 521 -IPVEEHEFEE 530
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 166/339 (48%), Gaps = 27/339 (7%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
+ TGSGKT A+ PI+ + + PR P ++L PTRELS Q+
Sbjct: 156 SHTGSGKTLAYLLPIVQLMREDEANLGKKTK----PR------RPRTVVLCPTRELSEQV 205
Query: 64 HAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKIK 123
+ A +H + ++ GG+ I Q +L +D++V TPGR++ IE + I
Sbjct: 206 YRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIA 265
Query: 124 YLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVR----QTMLFSATFPTDIQKLAADFLS 179
YL LDEAD M D GF +IRK + ++ QT+L +AT +QKL +
Sbjct: 266 YLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEE-- 323
Query: 180 NYIFLAVGRVGSST---ELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVE 236
F + + +ST ++ + + ++ + + L LL Q K + ++F
Sbjct: 324 ---FQGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALL--QVLEPSLAKGSKVMVFCN 378
Query: 237 TKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFK--RGFTPILVATDVASRGLDI 294
T + A++ +LS N + HG+ +R L+ FK G P LV TD+A+RGLD+
Sbjct: 379 TLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDL 438
Query: 295 PHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFS 333
V HV+ +D P++ DY+HR GRT R G G T+ S
Sbjct: 439 -DVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSLVS 476
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 166/333 (49%), Gaps = 29/333 (8%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
A+TG+GK+ AF P I VLKA VA ALIL PTREL+ QI
Sbjct: 372 AKTGTGKSMAFLLPAIETVLKAMNSGKGVNK----------VAPIFALILCPTRELASQI 421
Query: 64 HAEAT---KFAHQTGVKIVVAYGGASIVKQLQNLE-KGVDILVATPGRLVDIIERERVSL 119
AE KF GV+ ++ GG Q LE + IL+ATPGRL+D IE +
Sbjct: 422 AAEGKALLKFHDGIGVQTLI--GGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLT 479
Query: 120 SKIKYLAL---DEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAAD 176
S++ L L DEAD +LD+GF + + KI+ + P RQ++LFSAT P ++++++
Sbjct: 480 SRLMALKLFIVDEADLLLDLGFRRDVEKIIDCL----PRQRQSLLFSATIPKEVRRVSQL 535
Query: 177 FLS---NYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLI 233
L +YI +G T V++ +V + HL L ++ ++++ ++
Sbjct: 536 VLKRDHSYID-TIGLGCVETHDKVRQSCIVAPHESHFHLVPHLLKE--HINNTPDYKIIV 592
Query: 234 FVETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLD 293
F T + L IH K Q+ R R FK ILV +DV++RG++
Sbjct: 593 FCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMN 652
Query: 294 IPHVAHVINYDLPRDIADYVHRIGRTGRAGKSG 326
P V VI +P D Y+HR+GRTGR GK G
Sbjct: 653 YPDVTLVIQVGIPSDREQYIHRLGRTGREGKGG 685
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 163/331 (49%), Gaps = 25/331 (7%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
A+TG+GK+ AF P I VLKA I FV LIL PTREL+ QI
Sbjct: 419 AKTGTGKSMAFLLPAIETVLKAMNSGKGVHKVAPI-----FV-----LILCPTRELASQI 468
Query: 64 HAEATKF-AHQTGVKIVVAYGGASIVKQLQNLE-KGVDILVATPGRLVDIIERERVSLSK 121
AE + G+ + GG Q LE + IL+ATPGRL+D IE + S+
Sbjct: 469 AAEGKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSR 528
Query: 122 IKYLAL---DEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFL 178
+ L L DEAD +LD+GF++ + KI+ + P RQ++LFSAT P ++++++ L
Sbjct: 529 LMALKLFIVDEADLLLDLGFKRDVEKIIDCL----PRQRQSLLFSATIPKEVRRVSQLVL 584
Query: 179 S---NYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFV 235
+YI +G T V++ +V + HL L ++ ++++ ++F
Sbjct: 585 KRDHSYID-TIGLGCVETHDKVKQSCIVAPHESHFHLVPHLLKE--HINNMPDYKIIVFC 641
Query: 236 ETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIP 295
T + L IH K Q+ R FK ILV +DV++RG++ P
Sbjct: 642 STGMVTSLMYTLLREMKLNVREIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYP 701
Query: 296 HVAHVINYDLPRDIADYVHRIGRTGRAGKSG 326
V VI +P D Y+HR+GRTGR GK G
Sbjct: 702 DVTLVIQVGIPSDREQYIHRLGRTGREGKGG 732
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 167/346 (48%), Gaps = 42/346 (12%)
Query: 49 TALILSPTRELSCQIHAEATKFA-HQTGVKIVVAYGGASIVKQLQNLEKGV--DILVATP 105
+AL+L TREL+ QI E +F+ + K+ V YGG +I K ++L K I+V TP
Sbjct: 116 SALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI-KIHKDLLKNECPHIVVGTP 174
Query: 106 GRLVDIIERERVSLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSAT 165
GR++ + + +SL +++ LDE D+ML+ +R+ VQ++ P +Q M+FSAT
Sbjct: 175 GRVLALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSAT 231
Query: 166 FPTDIQKLAADFLSNYIFLAVG-----------------------RVGSSTELIVQKIEL 202
+I+ + F+ + + G R+G + + +E+
Sbjct: 232 LSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPMEI 291
Query: 203 VQDTDKRNHLANLL--------CRQRANVDHGKQAL----TLIFVETKKGADALEIWLSR 250
D + + L L+ + ++ AL +IFV++ A L L
Sbjct: 292 YVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 351
Query: 251 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 310
FP+I IH Q ER +SFK G ILVATD+ RG+DI V VINYD+P
Sbjct: 352 CNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSAD 411
Query: 311 DYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVP 356
Y+HR+GR GR G GLA F +S + + + E + +E+P
Sbjct: 412 TYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELP 457
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 170/364 (46%), Gaps = 60/364 (16%)
Query: 49 TALILSPTRELSCQIHAEATKFA-HQTGVKIVVAYGGASIVKQLQNLEKGV--DILVATP 105
+AL+L TREL+ QI E +F+ + K+ V YGG +I K ++L K I+V TP
Sbjct: 116 SALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI-KIHKDLLKNECPHIVVGTP 174
Query: 106 GRLVDIIERERVSLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSAT 165
GR++ + + +SL +++ LDE D+ML+ +R+ VQ++ P +Q M+FSAT
Sbjct: 175 GRVLALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSAT 231
Query: 166 FPTDI----QKLAADFLSN------------------------------YIFLAVGRVGS 191
+I +K DFL N +F A+ S
Sbjct: 232 LSKEIRPVCKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMFHS 291
Query: 192 STELIVQK-------IELVQDTDKRNHLANLL--------CRQRANVDHGKQAL----TL 232
T + +K +E+ D + + L L+ + ++ AL +
Sbjct: 292 KTHIFEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVV 351
Query: 233 IFVETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGL 292
IFV++ A L L FP+I IH Q ER +SFK G ILVATD+ RG+
Sbjct: 352 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGI 411
Query: 293 DIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAK 352
DI V VINYD+P Y+HR+GR GR G GLA F +S + + + E +
Sbjct: 412 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDI 471
Query: 353 QEVP 356
+E+P
Sbjct: 472 KELP 475
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 163/332 (49%), Gaps = 30/332 (9%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKT AF P + + K R PR+ V +++ PTREL+
Sbjct: 130 LGAARTGSGKTLAFLIPAVELLFKERFS----------PRNGTGV-----IVICPTRELA 174
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLS 120
Q A + + + GG + + Q + G ++++ATPGRL+D ++ + +
Sbjct: 175 IQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIY 234
Query: 121 K-IKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS 179
K +K L +DEADR+L+ FE+ + KI++ + P RQT LFSAT + ++ LA L+
Sbjct: 235 KHLKCLVIDEADRILEENFEEDMNKILKIL----PKTRQTALFSATQTSKVKDLARVSLT 290
Query: 180 NYIFLAV--GRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVET 237
+ + + V GR + E + Q +V + L L+ + N++ ++F T
Sbjct: 291 SPVHVDVDDGRRKVTNEGLEQGYCVVPS---KQRLILLISFLKKNLNKK----IMVFFST 343
Query: 238 KKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHV 297
K + + IHG Q R + F + IL+ TDVA+RGLDIP V
Sbjct: 344 CKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSV 403
Query: 298 AHVINYDLPRDIADYVHRIGRTGRA-GKSGLA 328
+I YD P +Y+HR+GRT R G G A
Sbjct: 404 DWIIQYDPPDKPTEYIHRVGRTARGEGAKGKA 435
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 159/345 (46%), Gaps = 53/345 (15%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A GSGKT F ++S R D + P AL + PTREL+
Sbjct: 135 IAQAHNGSGKTTCFVLGMLS-------------------RVDPTLREPQALCICPTRELA 175
Query: 61 CQIHAEATKFAHQTGV--KIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVS 118
Q K TG+ ++ V + +++ TPG L + +R+
Sbjct: 176 NQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLG 235
Query: 119 LSKIKYLALDEADRMLDM-GFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADF 177
L+ +K L DEAD ML GF KI++ + P Q +LFSATF ++ DF
Sbjct: 236 LNHLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPNF-QVLLFSATFNETVK----DF 290
Query: 178 LSNYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRAN---------VDHGKQ 228
++ V +L V++ +L D+ K+ ++C + N ++ G
Sbjct: 291 VAR-------TVKDPNQLFVKREDLALDSVKQ---YKVVCPKEQNKIEVIKDQIMELGDI 340
Query: 229 ALTLIFVETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVA 288
T+IFV+TK A + L+ G+ ++HG+ + +R++ ++ FK T +L+ATDV
Sbjct: 341 GQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVI 400
Query: 289 SRGLDIPHVAHVINYDLPR-------DIADYVHRIGRTGRAGKSG 326
+RG D V V+NY+LP D Y+HR+GR GR G+ G
Sbjct: 401 ARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRKG 445
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 174/392 (44%), Gaps = 69/392 (17%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVA--YPTALILSPTRE 58
+ A+TGSGKT AF PI+ +L R + + A Y ALI++PTRE
Sbjct: 232 IGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKG-EEAQKYAADGYLRALIITPTRE 290
Query: 59 LSCQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDII---ERE 115
L+ Q+ A VK+V GG KQ + L++ +I+VATPGRL +++ E+
Sbjct: 291 LALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKH 350
Query: 116 RVSLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMP--------------------PPG 155
V L + + LDEADRM++ G ++++ I+ + + P
Sbjct: 351 LVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKK 410
Query: 156 VRQTMLFSATFPTDIQKLAADFLS-----------------NYIFLAVGRVG-------- 190
RQT +FSAT L++DF N I + R G
Sbjct: 411 KRQTFVFSATIA-----LSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNVAII 465
Query: 191 --SSTELIVQKIE----LVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADAL 244
++T ++ KIE ++ +K +L +L HG Q T++F + +
Sbjct: 466 DLTTTSILAPKIEESFIKCEEKEKDAYLYYILSV------HG-QGRTIVFCTSVTDLRHI 518
Query: 245 EIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYD 304
L G + + Q R +++ F+ IL+ATD+ +RG+DI +V +I+Y
Sbjct: 519 SGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLVARGIDIKNVRTIIHYK 578
Query: 305 LPRDIADYVHRIGRTGRAGKSGLATAFFSSNK 336
LP YVHR GRT RA G + A N+
Sbjct: 579 LPHSAEVYVHRCGRTARAFADGCSIALIEPNE 610
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 171/365 (46%), Gaps = 40/365 (10%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A+TGSGKT AF PI+ + + R P +I+SPTREL+
Sbjct: 112 LGAARTGSGKTLAFVIPILEKLHRERWS----------PEDGV-----GCIIISPTRELA 156
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVD-IIERERVSL 119
Q K + GG V + ++ILV PGRL+ + E
Sbjct: 157 AQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEMNILVCAPGRLLQHMDETPNFEC 216
Query: 120 SKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS 179
+++ L LDEADR+LD F+ Q+ I+ Q+ P RQT+LFSAT ++ LA L
Sbjct: 217 PQLQILILDEADRVLDSAFKGQLDPIISQL----PKHRQTLLFSATQTKKVKDLARLSLR 272
Query: 180 N--YIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVET 237
+ YI + V ++ ++Q + +V K + L + + + +++ + L+F+ T
Sbjct: 273 DPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSFI---KTHLN----SRILVFLST 325
Query: 238 KKGADALEIWLS--RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIP 295
KK + + R G P ++HG Q +R F + +L TDV +RGLD
Sbjct: 326 KKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQS-VLFCTDVLARGLDFD 384
Query: 296 H-VAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQE 354
V V+ D P D+A Y+HR+GRT R G + F + P + ++E LQEAK
Sbjct: 385 KAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLT-----PSEEKMIEKLQEAK-- 437
Query: 355 VPAWL 359
VP L
Sbjct: 438 VPIKL 442
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 172/398 (43%), Gaps = 81/398 (20%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+ A TG+GKT A+ P+I + + RS A L++ PTREL
Sbjct: 71 LVNAPTGTGKTIAYLAPLIHHL---------QGHSPKVDRSHGTFA----LVIVPTRELC 117
Query: 61 CQIHAEATKFAHQTGVKIVVAY--GGASIVKQLQNLEKGVDILVATPGRLVDIIERERVS 118
Q++ K H+ IV Y GG K+ L KG+ IL+ATPGRL+D ++
Sbjct: 118 LQVYETLEKLLHRFHW-IVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASF 176
Query: 119 LSK-IKYLALDEADRMLDMGFEQQIRKIVQQM-----------HMPPPGV-RQTMLFSAT 165
+ K ++++ DEAD +L++G+ ++I +I++ + + P G+ +Q +L SAT
Sbjct: 177 VHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSAT 236
Query: 166 FPTDIQKLAADFLSNYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANL---------- 215
+ LA L + + + + L ++ D+D + + ++
Sbjct: 237 LNDKVNDLAKLSLDDPVMIGLDNTKLQQNLSIES-PAAPDSDAEDMVIHVNKSANPLSED 295
Query: 216 ------LCRQRANVDHGKQALTL-----------------IFVETKKGADALEIWLSRNG 252
L ++ V G + + L +F T+ D LS
Sbjct: 296 YGIPSQLVQRYLRVPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQ 355
Query: 253 FP------------------AIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDI 294
+P +HG Q +R A +FK +L++TDVA+RGLD
Sbjct: 356 WPPNSETEEEGTKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDF 415
Query: 295 PHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFF 332
P V +I YD P + +YVHR+GRT R G+ G A F
Sbjct: 416 PKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEALLFL 453
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 164/366 (44%), Gaps = 61/366 (16%)
Query: 6 TGSGKTAAFCFPIISGV----LKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSC 61
TGSGKT A+ PI+S + K+R I A+I++P+REL
Sbjct: 156 TGSGKTLAYLLPILSEIGPLAEKSRSSHSENDKRTEI----------QAMIVAPSRELGM 205
Query: 62 QIHAEATKF---AHQTGVKIVVAYGGASIVKQLQNLEKGVD-ILVATPGRLVDIIERERV 117
QI E K H+ V+ +V GGA+ ++Q + L+K I+V TPGR+ +I + ++
Sbjct: 206 QIVREVEKLLGPVHRRMVQQLV--GGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKL 263
Query: 118 SLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMP----PPGV------RQTMLFSATFP 167
++L LDE D +L F + I +I++ + P G RQT+L SAT P
Sbjct: 264 HTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVP 323
Query: 168 TDIQKLAADFLSNYIFL--------------------------AVGRVGSSTELIVQKIE 201
+ + A + + + A G++ ++ + + ++
Sbjct: 324 FSVIRAAKSWSHEPVLVQANKVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALK 383
Query: 202 LVQDTDKRNHLANLLCRQRANVDHGKQALTLI-FVETKKGADALEIWLSRNGFPAIAIHG 260
K H + L R H A ++I F+ + + L G + +HG
Sbjct: 384 HYYCISKHQHKVDTLRR----CVHALDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHG 439
Query: 261 DKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTG 320
D ++ R L+ FK G +LV ++++RGLD+ V+N +LP D Y HR GRTG
Sbjct: 440 DLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDVAECDLVVNLELPTDAVHYAHRAGRTG 499
Query: 321 RAGKSG 326
R G+ G
Sbjct: 500 RLGRKG 505
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 178/404 (44%), Gaps = 89/404 (22%)
Query: 6 TGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQIHA 65
TGSGKT ++ PI+ +L +R V AL++ PTR+L+ Q+
Sbjct: 81 TGSGKTLSYALPIVQ-LLASRP-----------------VRCLRALVVLPTRDLALQVKD 122
Query: 66 EATKFAHQTGVKIVVAYGGASIVKQL---------------------QNLEKGVDILVAT 104
A G+ + A G +SI ++ QNLE VDILVAT
Sbjct: 123 VFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVAT 182
Query: 105 PGRLVDIIERER-VSLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGV------- 156
PGRL+D I + +L ++YL +DE DR+L ++ + ++Q +
Sbjct: 183 PGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPF 242
Query: 157 ------------RQT---------------MLFSATFPTDIQKLAADFLSNYIFLAVGRV 189
RQ+ M+ SAT D KL L + +F+ G
Sbjct: 243 VPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTG-- 300
Query: 190 GSSTEL--IVQKIELVQDTD-KRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEI 246
GS L ++ + L+ +T K +L LL G++ + IF + + L
Sbjct: 301 GSRYRLPEKLECLRLICETGMKPVYLVALL-----KSWEGEKCI--IFTSSVETTRRLCK 353
Query: 247 WLSRNGFPAIAIH---GDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINY 303
L+ G P I G Q R + L++F++G +LVA+D +RG+D+ V +VINY
Sbjct: 354 LLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINY 413
Query: 304 DLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEI 347
D+P ++HR GRT RAG++G S+++ +K L ++
Sbjct: 414 DMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKV 457
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 151/301 (50%), Gaps = 51/301 (16%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYP---TALILSPTRELS 60
A TGSGKT AF P I I RS+++ P +I+SPTRELS
Sbjct: 61 AATGSGKTLAFLLPFIE----------------IIRRSNSYPPKPHQVMGVIISPTRELS 104
Query: 61 CQIHAEATKFAHQTGVKIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIER-ERVSL 119
QIH K A + + + L+ E+G ++L+ TPGRL D+++R E +
Sbjct: 105 AQIH----KVARAVRLDFAKCREVEADMNTLE--EEGANLLIGTPGRLSDMMKRMEFLDF 158
Query: 120 SKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS 179
++ L LDEADR+LDMGF++Q+ I+ ++ P R+T LFSAT + LA L
Sbjct: 159 RNLEILILDEADRLLDMGFQKQVNYIISRL----PKQRRTGLFSATQTQAVADLAKAGLR 214
Query: 180 NYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 239
N +L S++L+ L+++ +K+ + + C A VD+ L + + + K
Sbjct: 215 NP-YLKCEADQKSSQLVHL---LIENKNKKLVVFFMTC---ACVDYW--GLVISKIPSLK 265
Query: 240 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 299
S + FP HG Q R+ AL SF + +L+ TDVA+RGLDIP + +
Sbjct: 266 ---------SISFFPT---HGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVY 313
Query: 300 V 300
+
Sbjct: 314 I 314
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 163/364 (44%), Gaps = 42/364 (11%)
Query: 5 QTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQIH 64
Q+GSGKT A+ P+I + + S + P ++L PT EL+ Q+
Sbjct: 419 QSGSGKTLAYLVPVIQRLREEELQGH----------SKSSPGCPRVIVLVPTAELASQVL 468
Query: 65 AEATKFAHQTGV--KIVVAYGGASIVKQLQNLEKGVDILVATPGRLVDIIERERVSLSKI 122
A + ++GV + +V GG QL+NLE+GVD+L+ATPGR ++ + LS +
Sbjct: 469 ANCRSIS-KSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNL 527
Query: 123 KYLALDEADRML-DMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDI-QKLAADFLSN 180
+ LDE D + D FE ++ ++ P Q + +AT P +I KL F
Sbjct: 528 RCAILDEVDILFGDDEFEAALQNLINS----SPVTAQYLFVTATLPLEIYNKLVEVFPDC 583
Query: 181 YIFLA--VGRVGSSTELIV------QKIELVQDTDKRNHLANLLCRQRANVDHGKQALTL 232
+ + V RV ++ E + E +T +N LL ++ + T+
Sbjct: 584 EVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPETAFQNKKTALL----QIMEENPVSKTI 639
Query: 233 IFVETKKGADALEIWLSR-----NGFPAIAIHGDKVQMERERALRSFKRG----FTPILV 283
IF + +E R + H Q R ++ F + LV
Sbjct: 640 IFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLV 699
Query: 284 ATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAF-FSSNKNPPIAK 342
TD ASRG+D V HV+ +D PRD ++YV R+GRT R G G AF F K +A+
Sbjct: 700 CTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTAR-GARGKGKAFIFVVGKQVGLAR 758
Query: 343 ALVE 346
++E
Sbjct: 759 RIIE 762
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 155/368 (42%), Gaps = 70/368 (19%)
Query: 1 MACAQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELS 60
+A A+TGSGKT A+ P++ + A P+A IL P+REL
Sbjct: 87 VARAKTGSGKTLAYLLPLLQKLFSADSVSKKKLA-------------PSAFILVPSRELC 133
Query: 61 CQIHAEATKFAHQTGVKI-VVAYGGASIVKQLQNLEKGV-DILVATPGRL-----VDIIE 113
Q++ E + V++ V + ++N G+ +ILV+TP + ++E
Sbjct: 134 QQVYTEVSSLIELCRVQLKAVQLTSSMSASDMRNALAGLPEILVSTPACIPKCFAAGVLE 193
Query: 114 RERVSLSKIKYLALDEADRMLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKL 173
VS S + L LDEAD +L G+E +R + + P Q +L SAT +D++KL
Sbjct: 194 PTAVSES-LSILVLDEADLLLSYGYEDNLRSVTSII----PRRCQCLLMSATTSSDVEKL 248
Query: 174 AADFLSNYIFLAVGRVGSSTELIVQKIEL----VQDTDKRNHLANLLCRQRANVDHGKQA 229
L N I L + E + ++ DK H+ LL + Q
Sbjct: 249 KKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQDKLLHILALLKLEVV------QK 302
Query: 230 LTLIFVETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVAS 289
LIF+ T L+++L + G + ++G+ Q R L F G L+ATD S
Sbjct: 303 KILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHILEQFNAGLFDYLIATDDNS 362
Query: 290 -----------------------------------RGLDIPHVAHVINYDLPRDIADYVH 314
RG+D V VIN+D+P+ + Y+H
Sbjct: 363 QTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKVHTVINFDMPQSVTGYIH 422
Query: 315 RIGRTGRA 322
RIGRTGRA
Sbjct: 423 RIGRTGRA 430
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 147/342 (42%), Gaps = 51/342 (14%)
Query: 4 AQTGSGKTAAFCFPIISGVLKARXXXXXXXXXXXIPRSDAFVAYPTALILSPTRELSCQI 63
AQTGSGKT + I S + R A+I+ PTREL Q+
Sbjct: 120 AQTGSGKTLTYLLLIFSLINPQRSSVQ-------------------AVIVVPTRELGMQV 160
Query: 64 HAEATKFAHQT-----GVKIVVAYGGASIVKQLQNLE-KGVDILVATPGRLVDIIERERV 117
A A ++ G ++ G ++ + L+ + ILVAT L ++E+
Sbjct: 161 TKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIF 220
Query: 118 SLSKIKYLALDEADRMLDMGFEQ-QIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAAD 176
+ ++ L +DE D + + +RK++ RQT+ SA+ P + D
Sbjct: 221 RIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSF--SSCDKRQTVFASASIPQH-KHFVHD 277
Query: 177 FLS------NYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQAL 230
+ + + + V + ++ + + + T+K L LL D + A+
Sbjct: 278 CIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALL-----ESDAPESAI 332
Query: 231 TLIFVETKKGADA---------LEIWLS--RNGFPAIAIHGDKVQMERERALRSFKRGFT 279
+ +++K A +E + + + + GD R +L ++G
Sbjct: 333 IFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGG 392
Query: 280 PILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGR 321
+LV+TD+A+RG+D+P H+ N+DLP+ + DY+HR GR GR
Sbjct: 393 FLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 434
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 109/240 (45%), Gaps = 26/240 (10%)
Query: 100 ILVATPGRLVDIIERERVSLSKIKYLALDEADRMLDMGFE-QQIRKIVQQMHMPPPGVRQ 158
ILVAT L ++E+ + ++ L +DE D + + +RK++ RQ
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSF--SSCDKRQ 103
Query: 159 TMLFSATFPTDIQKLAADFLS------NYIFLAVGRVGSSTELIVQKIELVQDTDKRNHL 212
T+ SA+ P + D + + + + V + ++ + + + T+K L
Sbjct: 104 TVFASASIPQH-KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVL 162
Query: 213 ANLLCRQRANVDHGKQALTLIFVETKKGADA---------LEIWLS--RNGFPAIAIHGD 261
LL D + A+ + +++K A +E + + + + GD
Sbjct: 163 LALL-----ESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGD 217
Query: 262 KVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGR 321
R +L ++G +LV+TD+A+RG+D+P H+ N+DLP+ + DY+HR GR GR
Sbjct: 218 MNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 277
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 157 RQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGS-----STELIVQKIELVQDTDKRNH 211
+Q + +AT P + +K A L + AV G+ S L + +E+ D+
Sbjct: 353 KQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQ---- 408
Query: 212 LANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNGFPAIAIHGDKVQMERERAL 271
+ L N ++ T++F T + +A+ L + H + ER L
Sbjct: 409 -VDALIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANIL 467
Query: 272 RSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAF 331
F R + V TD A+RG+D+P+V+HVI D D++HRIGRT RAG+ G T+
Sbjct: 468 ADF-RETGGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSL 526
Query: 332 FSSNKNPPIAKALVEILQEA 351
++ + LVE ++EA
Sbjct: 527 YTEAN-----RDLVEAIREA 541