Miyakogusa Predicted Gene

Lj4g3v1876880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1876880.1 tr|A9T2C9|A9T2C9_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,54.55,0.011,seg,NULL,
NODE_48014_length_844_cov_46.382702.path2.1
         (86 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G20120.1 | Symbols:  | unknown protein; Has 54 Blast hits to ...    99   8e-22

>AT5G20120.1 | Symbols:  | unknown protein; Has 54 Blast hits to
          54 proteins in 26 species: Archae - 0; Bacteria - 0;
          Metazoa - 18; Fungi - 0; Plants - 18; Viruses - 0;
          Other Eukaryotes - 18 (source: NCBI BLink). |
          chr5:6795889-6796921 FORWARD LENGTH=188
          Length = 188

 Score = 98.6 bits (244), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 54/75 (72%)

Query: 12 YMRQRHSQGYGSSGDDLEDDACXXXXXXXXXXXXXXTWIEMLENFLWLASAAFVLYYGDQ 71
          Y+RQRHSQGY S GDDLEDDAC              TW+E+LEN LW+ASA F++Y+GD+
Sbjct: 12 YIRQRHSQGYASGGDDLEDDACSRPQPFSLENPRSKTWVEILENVLWIASAVFIVYFGDR 71

Query: 72 HSNMIYLLCYDDRIR 86
          HSNMI++L  D RI+
Sbjct: 72 HSNMIHILLRDARIK 86