Miyakogusa Predicted Gene

Lj4g3v1865760.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1865760.3 tr|G7JVC3|G7JVC3_MEDTR Nudix hydrolase
OS=Medicago truncatula GN=MTR_4g113990 PE=4 SV=1,76.41,0,NUDIX,NUDIX
hydrolase domain; NUDIX-like,NADH pyrophosphatase-like, N-terminal;
zf-NADH-PPase,Zinc r,CUFF.49899.3
         (389 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G20070.1 | Symbols: ATNUDT19, ATNUDX19, NUDX19 | nudix hydrol...   488   e-138

>AT5G20070.1 | Symbols: ATNUDT19, ATNUDX19, NUDX19 | nudix hydrolase
           homolog 19 | chr5:6779893-6782308 FORWARD LENGTH=438
          Length = 438

 Score =  488 bits (1255), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 234/384 (60%), Positives = 294/384 (76%), Gaps = 3/384 (0%)

Query: 1   MSMSLQFHAFAGNPLRPKLPISHDPFSPSAALEALNARILDXXXXXXXXXXFKVLPFRNG 60
           MSM+L+ HAFAGNPL+ K P S DPFSP++A E+L   I            FKVLPF  G
Sbjct: 36  MSMNLKTHAFAGNPLKSKTPKSTDPFSPTSAFESLKTLIPVIPNHSTPSPDFKVLPFSKG 95

Query: 61  KPLXXXXXXXXXXXPPIWHLGWIELEDFRGMLGNTGAQLSGESMVYLGLSAEDDAVLWAI 120
           +PL           P IWHLGW+ L D + +L + G  L+ +S+VYLG   E+D V WA+
Sbjct: 96  RPLVFSSGGDANTTP-IWHLGWVSLADCKVLLASCGVDLNEDSLVYLGPKLEEDLVYWAV 154

Query: 121 DVSAKA-PXXXXXXXXXXXXXRTLMVATDWEDLKATGDLAIAGHAKALLEWHNASRFCGH 179
           D++                  RTLMVA DW D +A  +LAIAG+A+ALLEWHN S+FCG 
Sbjct: 155 DLAEDGFVSELGGRKLCFVELRTLMVAADWADQRAMDELAIAGNARALLEWHNVSQFCGS 214

Query: 180 CGEKTVPVEAGRRKKCSNDSCKKRIYPRLDPVVIMLVIDRENDLVLLGKRPKHVYQLWSC 239
           CG KT P EAGRRK+CS+++C+KR+YPR+DPVVIMLVIDREND  LL ++ ++V ++WSC
Sbjct: 215 CGSKTFPKEAGRRKQCSDETCRKRVYPRVDPVVIMLVIDRENDRALLSRQSRYVPRMWSC 274

Query: 240 LSGFTEPGESLEEAVRRETWEETGIEVGEVVYHSSQPWPVGPSSIPYQLMVGFFAYAKSL 299
           L+GF EPGESLEEAVRRETWEETGIEVG+VVYHSSQPWPVGPSS+P QLM+GFFA+AK+L
Sbjct: 275 LAGFIEPGESLEEAVRRETWEETGIEVGDVVYHSSQPWPVGPSSMPCQLMLGFFAFAKTL 334

Query: 300 EITVDKNELEDAKWYSREDVRKALASAKYKKAQRTAAAKVEQMCKGVDNNNRSLATDFNV 359
           +I VDK ELEDA+W+SRE+V+KALA A+Y+KAQRTAAAKVEQ+CKGV+  ++SL+TDFN+
Sbjct: 335 DINVDKEELEDAQWHSREEVKKALAVAEYRKAQRTAAAKVEQICKGVE-RSQSLSTDFNL 393

Query: 360 ESGEDAPIYVPGPYAIAHHLISSW 383
           ESGE AP+++PGP+AIAHHLIS+W
Sbjct: 394 ESGELAPMFIPGPFAIAHHLISAW 417