Miyakogusa Predicted Gene

Lj4g3v1789220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1789220.1 Non Chatacterized Hit- tr|I1MUE6|I1MUE6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.19,0,DUF92,Protein
of unknown function DUF92, TMEM19; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,Protein ,CUFF.49725.1
         (290 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19930.2 | Symbols:  | Protein of unknown function DUF92, tra...   335   2e-92
AT5G19930.1 | Symbols:  | Protein of unknown function DUF92, tra...   335   2e-92

>AT5G19930.2 | Symbols:  | Protein of unknown function DUF92,
           transmembrane | chr5:6737872-6739283 REVERSE LENGTH=288
          Length = 288

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 172/290 (59%), Positives = 207/290 (71%), Gaps = 2/290 (0%)

Query: 1   MEFSPPPWFQPSFAVAISFLIAFRAHRKKSLDTSGALAGFIVMSIHFFAGYRFGAMLLAF 60
           ME SP   F+  FAV IS LIAFR++++KSLD SG +AGF+VM+IHF AG+R+GA+LL F
Sbjct: 1   METSPQ--FRLIFAVIISSLIAFRSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVF 58

Query: 61  FFSSSKLTKLGEDIKRVVDPEFKEGGQRNWLQVLSNSGIASVLVVYIWVLTQGQDMCLNS 120
           F +SSKLTK+GED KR VD EFKEGGQRNW+QVL NSGIASVLVV    LT  +D CL+S
Sbjct: 59  FLTSSKLTKVGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDS 118

Query: 121 KDSPHVTYLIGAVIGHYSCCNGDTWSSELGILSDDRPRLITTFKRVRRGINGAVTKTXXX 180
           K S  VT LIG +IGHY+CCNGDTWSSELG+LSD +PRLITTFK V++G NG VTK    
Sbjct: 119 KQSEIVTALIGGIIGHYACCNGDTWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLL 178

Query: 181 XXXXXXFVIGLSFVLMGLLTASCEPDLVLKQLLVIPIATVAGLLGSVIDSLLGATLQFTG 240
                   +GL+F++ GL TASC  D+ LKQLLVIP++ +AGL GS+IDS+LGAT+QF+G
Sbjct: 179 AALAAGTTVGLTFLIFGLFTASCASDVALKQLLVIPLSALAGLCGSLIDSILGATIQFSG 238

Query: 241 FCSLRQXXXXXXXXXXXXISGVDILDNNAXXXXXXXXXXXXXXXACYYIF 290
           FCS+R             ISGVDILDNN                A  YIF
Sbjct: 239 FCSVRNKVVGKPGPTVKKISGVDILDNNGVNFVSILLTSFLTSIASVYIF 288


>AT5G19930.1 | Symbols:  | Protein of unknown function DUF92,
           transmembrane | chr5:6737872-6739283 REVERSE LENGTH=288
          Length = 288

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 172/290 (59%), Positives = 207/290 (71%), Gaps = 2/290 (0%)

Query: 1   MEFSPPPWFQPSFAVAISFLIAFRAHRKKSLDTSGALAGFIVMSIHFFAGYRFGAMLLAF 60
           ME SP   F+  FAV IS LIAFR++++KSLD SG +AGF+VM+IHF AG+R+GA+LL F
Sbjct: 1   METSPQ--FRLIFAVIISSLIAFRSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVF 58

Query: 61  FFSSSKLTKLGEDIKRVVDPEFKEGGQRNWLQVLSNSGIASVLVVYIWVLTQGQDMCLNS 120
           F +SSKLTK+GED KR VD EFKEGGQRNW+QVL NSGIASVLVV    LT  +D CL+S
Sbjct: 59  FLTSSKLTKVGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDS 118

Query: 121 KDSPHVTYLIGAVIGHYSCCNGDTWSSELGILSDDRPRLITTFKRVRRGINGAVTKTXXX 180
           K S  VT LIG +IGHY+CCNGDTWSSELG+LSD +PRLITTFK V++G NG VTK    
Sbjct: 119 KQSEIVTALIGGIIGHYACCNGDTWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLL 178

Query: 181 XXXXXXFVIGLSFVLMGLLTASCEPDLVLKQLLVIPIATVAGLLGSVIDSLLGATLQFTG 240
                   +GL+F++ GL TASC  D+ LKQLLVIP++ +AGL GS+IDS+LGAT+QF+G
Sbjct: 179 AALAAGTTVGLTFLIFGLFTASCASDVALKQLLVIPLSALAGLCGSLIDSILGATIQFSG 238

Query: 241 FCSLRQXXXXXXXXXXXXISGVDILDNNAXXXXXXXXXXXXXXXACYYIF 290
           FCS+R             ISGVDILDNN                A  YIF
Sbjct: 239 FCSVRNKVVGKPGPTVKKISGVDILDNNGVNFVSILLTSFLTSIASVYIF 288