Miyakogusa Predicted Gene
- Lj4g3v1784850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1784850.1 tr|C1FHC3|C1FHC3_MICSR Predicted protein
(Fragment) OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MI,45.8,2e-17,Cyclophilin-like,Cyclophilin-like peptidyl-prolyl
cis-trans isomerase domain; Pro_isomerase,Cyclophi,CUFF.49778.1
(329 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G74070.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 302 3e-82
AT5G13120.1 | Symbols: ATCYP20-2, CYP20-2 | cyclophilin 20-2 | c... 66 3e-11
AT5G13120.2 | Symbols: CYP20-2 | cyclophilin 20-2 | chr5:4162714... 66 4e-11
AT4G38740.1 | Symbols: ROC1 | rotamase CYP 1 | chr4:18083620-180... 57 1e-08
AT5G58710.1 | Symbols: ROC7 | rotamase CYP 7 | chr5:23717840-237... 57 2e-08
AT3G55920.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 57 2e-08
AT3G62030.3 | Symbols: ROC4 | rotamase CYP 4 | chr3:22973708-229... 57 2e-08
AT2G29960.1 | Symbols: CYP5, ATCYP5, CYP19-4 | cyclophilin 5 | c... 56 3e-08
AT3G62030.2 | Symbols: ROC4 | rotamase CYP 4 | chr3:22973004-229... 56 4e-08
AT3G62030.1 | Symbols: ROC4 | rotamase CYP 4 | chr3:22973708-229... 56 4e-08
AT2G29960.2 | Symbols: CYP5, ATCYP5, CYP19-4 | cyclophilin 5 | c... 54 2e-07
AT2G21130.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 53 3e-07
AT4G34960.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 49 5e-06
>AT1G74070.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr1:27851749-27852861 REVERSE LENGTH=317
Length = 317
Score = 302 bits (773), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/293 (55%), Positives = 200/293 (68%), Gaps = 18/293 (6%)
Query: 39 IKQQCRLSRRELTIXXXXXXXXXXGAQAV--DGTKARAEENVVEPSNSDKPEENLTTTTT 96
+++ C+LSRR L+ D +KA+A+ + P NLT
Sbjct: 37 LERNCKLSRRNLSKSSLLLLLTTQTTLTPLLDFSKAQAD-TIANP--------NLT---- 83
Query: 97 PSCTERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVSYRRKEFV 156
+C R PTKK F D++ID EP+GRI IGLYGDDVPAG RFS IVSG AG++YRRK+FV
Sbjct: 84 -NCENRIPTKKAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFV 142
Query: 157 KILPNYVQHGGLRSYGVDAEMARGTGGDLAADSLVEEWERTYEGCPGTKNVAGSVGIIVR 216
KI+P YVQHGG+RSYGVDAE A G L +L+EEWER G N AGSVGI+VR
Sbjct: 143 KIMPGYVQHGGIRSYGVDAERATAAVGSL--QNLIEEWERGKRGEICNVNKAGSVGIVVR 200
Query: 217 DPSKPPPKMKLVARMGKLEIDQEEVGIDPNGTEFVIATKDSPELDASSXXXXXXXXXXXX 276
DPSKPPPK KLVAR GKL +++E + + PNGTEFVI DSPEL+ S
Sbjct: 201 DPSKPPPKTKLVARNGKLVVEEEVIAVGPNGTEFVITAVDSPELEDSVLVIGKVLEGMGV 260
Query: 277 XQRIGQVKTVQENTSSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCGIME 329
+++ +VKTV++NTSSPYFRVAK+IGDKRAVVAERGFNRPYSKV+VTNCG++E
Sbjct: 261 VEKMREVKTVRDNTSSPYFRVAKVIGDKRAVVAERGFNRPYSKVVVTNCGLIE 313
>AT5G13120.1 | Symbols: ATCYP20-2, CYP20-2 | cyclophilin 20-2 |
chr5:4162714-4164720 REVERSE LENGTH=259
Length = 259
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 95/230 (41%), Gaps = 66/230 (28%)
Query: 101 ERKPTKKVFFDIAIDREPVG----RITIGLYGDDVPAGVDRFSKIVSGAAGVSYRRKEFV 156
+ K T KV+FDI++ PVG RI IGLYGDDVP V+ F + +G G Y+ F
Sbjct: 85 QSKITHKVYFDISVG-NPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFH 143
Query: 157 KILPNYVQHGGLRSYGVDAEMARGTGGDLAADSLVEEWERTYEGCPGTKNVAGSVGIIVR 216
+++ +++ GG D E GTGG + RT++
Sbjct: 144 RVIRDFMIQGG------DFEKGNGTGGK-------SVYGRTFK----------------- 173
Query: 217 DPSKPPPKMKLVARMGKLEIDQEEVGIDPNGTEFVIATKDSPELDASSXXXXXXXXXXXX 276
KL + +G + G + NG++F I T + LD
Sbjct: 174 -----DENFKL-SHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVV---------- 217
Query: 277 XQRIGQVKTVQENTSSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCG 326
GQV E V KLI ++ +RG +RP KV++ +CG
Sbjct: 218 ---FGQVIEGME--------VVKLIEEQE---TDRG-DRPRKKVVIADCG 252
>AT5G13120.2 | Symbols: CYP20-2 | cyclophilin 20-2 |
chr5:4162714-4164720 REVERSE LENGTH=255
Length = 255
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 95/230 (41%), Gaps = 66/230 (28%)
Query: 101 ERKPTKKVFFDIAIDREPVG----RITIGLYGDDVPAGVDRFSKIVSGAAGVSYRRKEFV 156
+ K T KV+FDI++ PVG RI IGLYGDDVP V+ F + +G G Y+ F
Sbjct: 81 QSKITHKVYFDISVG-NPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFH 139
Query: 157 KILPNYVQHGGLRSYGVDAEMARGTGGDLAADSLVEEWERTYEGCPGTKNVAGSVGIIVR 216
+++ +++ GG D E GTGG + RT++
Sbjct: 140 RVIRDFMIQGG------DFEKGNGTGGK-------SVYGRTFK----------------- 169
Query: 217 DPSKPPPKMKLVARMGKLEIDQEEVGIDPNGTEFVIATKDSPELDASSXXXXXXXXXXXX 276
KL + +G + G + NG++F I T + LD
Sbjct: 170 -----DENFKL-SHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVV---------- 213
Query: 277 XQRIGQVKTVQENTSSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCG 326
GQV E V KLI ++ +RG +RP KV++ +CG
Sbjct: 214 ---FGQVIEGME--------VVKLIEEQE---TDRG-DRPRKKVVIADCG 248
>AT4G38740.1 | Symbols: ROC1 | rotamase CYP 1 |
chr4:18083620-18084138 REVERSE LENGTH=172
Length = 172
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 107 KVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVS-------YRRKEFVKIL 159
KV+FD+ ID +P GRI + LY D P + F + +G GV ++ +F +++
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 160 PNYVQHGGLRSYGVDAEMARGTGGDLAADSLVEE--WERTYEGCPGTKNVA 208
PN++ GG D GTGG+ S E+ +ER + G PG ++A
Sbjct: 65 PNFMCQGG------DFTAGNGTGGESIYGSKFEDENFERKHTG-PGILSMA 108
>AT5G58710.1 | Symbols: ROC7 | rotamase CYP 7 |
chr5:23717840-23719495 FORWARD LENGTH=204
Length = 204
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 55/187 (29%)
Query: 84 SDKPEENLTTTTTPSCTERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVS 143
+ K +ENL ++ T KV+FD+ ID + GRI +GL+G VP V+ F + +
Sbjct: 23 AKKSKENL----------KEITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCT 72
Query: 144 GAAGV-------SYRRKEFVKILPNYVQHGGLRSYGVDAEMARGTGGD-LAADSLVEEWE 195
G G+ Y+ F +I+P+++ GG ++G G GG+ + + +E
Sbjct: 73 GEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHG------NGMGGESIYGEKFADENF 126
Query: 196 RTYEGCPGTKNVAGSVGIIVRDPSKPPPKMKLVARMGKLEIDQEEVGIDPNGTEFVIATK 255
+ PG ++A G D NG++F I T
Sbjct: 127 KLKHTGPGFLSMA-------------------------------NAGQDTNGSQFFITTV 155
Query: 256 DSPELDA 262
+ LD
Sbjct: 156 TTSWLDG 162
>AT3G55920.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr3:20743529-20745049 REVERSE LENGTH=228
Length = 228
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 45/166 (27%)
Query: 105 TKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVS-------YRRKEFVK 157
T KV+FDI I+ P GRI IGL+G+ VP + F + +G GV ++ F +
Sbjct: 58 THKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHR 117
Query: 158 ILPNYVQHGGLRSYGVDAEMARGTGGD-LAADSLVEEWERTYEGCPGTKNVAGSVGIIVR 216
I+P ++ GG D G GG+ + D +E + PG ++A S
Sbjct: 118 IIPGFMIQGG------DFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANS------ 165
Query: 217 DPSKPPPKMKLVARMGKLEIDQEEVGIDPNGTEFVIATKDSPELDA 262
G D NG++F I T + LD
Sbjct: 166 -------------------------GPDSNGSQFFITTVTTSWLDG 186
>AT3G62030.3 | Symbols: ROC4 | rotamase CYP 4 |
chr3:22973708-22975139 FORWARD LENGTH=259
Length = 259
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 25/110 (22%)
Query: 74 AEENVVEPSNSDKPEENLTTTTTPSCTERKPTKKVFFDIAIDREPVGRITIGLYGDDVPA 133
AEE V+EP + K T KV+FD+ I E GRI +GL+G+ VP
Sbjct: 81 AEEEVIEP-------------------QAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPK 121
Query: 134 GVDRFSKIVSGAAGVSYRRKEFVKILPNYVQHGGLRSYGVDAEMARGTGG 183
V+ F + +G Y+ F +I+ +++ GG D GTGG
Sbjct: 122 TVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGG------DFTEGNGTGG 165
>AT2G29960.1 | Symbols: CYP5, ATCYP5, CYP19-4 | cyclophilin 5 |
chr2:12769183-12770528 REVERSE LENGTH=201
Length = 201
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 45/169 (26%)
Query: 102 RKPTKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGV-------SYRRKE 154
++ T KV+FD+ ID + GR+ IGL+G VP + F + +G GV Y+ +
Sbjct: 28 KEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSK 87
Query: 155 FVKILPNYVQHGGLRSYGVDAEMARGTGGD-LAADSLVEEWERTYEGCPGTKNVAGSVGI 213
F +I+P+++ GG D G GG+ + +E + PG ++A S
Sbjct: 88 FHRIIPSFMIQGG------DFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANS--- 138
Query: 214 IVRDPSKPPPKMKLVARMGKLEIDQEEVGIDPNGTEFVIATKDSPELDA 262
G D NG++F I T + LD
Sbjct: 139 ----------------------------GEDTNGSQFFITTVTTSWLDG 159
>AT3G62030.2 | Symbols: ROC4 | rotamase CYP 4 |
chr3:22973004-22975139 FORWARD LENGTH=313
Length = 313
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 101 ERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVSYRRKEFVKILP 160
+ K T KV+FD+ I E GRI +GL+G+ VP V+ F + +G Y+ F +I+
Sbjct: 143 QAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIK 202
Query: 161 NYVQHGGLRSYGVDAEMARGTGG 183
+++ GG D GTGG
Sbjct: 203 DFMIQGG------DFTEGNGTGG 219
>AT3G62030.1 | Symbols: ROC4 | rotamase CYP 4 |
chr3:22973708-22975139 FORWARD LENGTH=260
Length = 260
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 72 ARAEENVVEPSNSDKPEENLTTTTTPSCTERKPTKKVFFDIAIDREPVGRITIGLYGDDV 131
A EE V+EP + K T KV+FD+ I E GRI +GL+G+ V
Sbjct: 80 AAEEEEVIEP-------------------QAKVTNKVYFDVEIGGEVAGRIVMGLFGEVV 120
Query: 132 PAGVDRFSKIVSGAAGVSYRRKEFVKILPNYVQHGGLRSYGVDAEMARGTGG 183
P V+ F + +G Y+ F +I+ +++ GG D GTGG
Sbjct: 121 PKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGG------DFTEGNGTGG 166
>AT2G29960.2 | Symbols: CYP5, ATCYP5, CYP19-4 | cyclophilin 5 |
chr2:12769183-12770528 REVERSE LENGTH=191
Length = 191
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 102 RKPTKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGV-------SYRRKE 154
++ T KV+FD+ ID + GR+ IGL+G VP + F + +G GV Y+ +
Sbjct: 28 KEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSK 87
Query: 155 FVKILPNYVQHGGLRSYG 172
F +I+P+++ GG ++G
Sbjct: 88 FHRIIPSFMIQGGDFTHG 105
>AT2G21130.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr2:9055619-9056143 REVERSE LENGTH=174
Length = 174
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 107 KVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVS-------YRRKEFVKIL 159
KVFFD+ I P G+I + LY D P + F + +G GV ++ F +++
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 160 PNYVQHGGLRSYGVDAEMARGTGGD--LAADSLVEEWERTYEGCPGTKNVA 208
PN++ GG D GTGG+ A E +ER + G PG ++A
Sbjct: 66 PNFMCQGG------DFTKGNGTGGESIYGAKFEDENFERKHTG-PGILSMA 109
>AT4G34960.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr4:16648865-16650646 FORWARD LENGTH=224
Length = 224
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 101 ERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAG-------VSYRRK 153
+ + T +VF D+ ID + +GRI IGLYG VP V+ F + +G G + Y+
Sbjct: 42 DHEITNRVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGT 101
Query: 154 EFVKILPNYVQHGG 167
F +I+ +V GG
Sbjct: 102 PFHRIISGFVIQGG 115