Miyakogusa Predicted Gene

Lj4g3v1772630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1772630.1 Non Chatacterized Hit- tr|C6T1P7|C6T1P7_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,50.94,0.00000000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.49706.1
         (435 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23080.1 | Symbols: TGH | SWAP (Suppressor-of-White-APricot)/...   195   5e-50
AT5G23080.2 | Symbols: TGH | SWAP (Suppressor-of-White-APricot)/...   194   7e-50

>AT5G23080.1 | Symbols: TGH | SWAP
           (Suppressor-of-White-APricot)/surp domain-containing
           protein | chr5:7743226-7748889 REVERSE LENGTH=930
          Length = 930

 Score =  195 bits (495), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/227 (50%), Positives = 134/227 (59%), Gaps = 20/227 (8%)

Query: 1   MSEAARAHERLSFEAAAEAIEKGKQGRGSKLSIPSSMDFITGGVMQFTSGGVELKKDQQT 60
           MSE+ARA ERL FEAAAEAIEKGK  +  + +    +DF+ GG +QFTSGG E  KD   
Sbjct: 566 MSESARAQERLDFEAAAEAIEKGKAYKEVRRATEQPLDFLAGG-LQFTSGGTEQIKDTGV 624

Query: 61  EDFMEKKMYPKREEFQWRPSPLLCKRFDLIDPYMGKPAPAPRIRGKIDSLIFTSDSVKGT 120
            D    K YPKREEFQWRPSPLLCKRFDL DP+MGK  PAPR R K+DSL+F  D+VK  
Sbjct: 625 VDMKSSKTYPKREEFQWRPSPLLCKRFDLPDPFMGKLPPAPRARNKMDSLVFLPDTVKAA 684

Query: 121 ---RVEEPVIFKKDVSHLQQSANKDRDKIVAENKIEEDVEVENIERPVDLYKAIFXXXXX 177
              +V E  + KK+ S  +     + + +                   DLYKAIF     
Sbjct: 685 SARQVSESQVPKKETSIEEPEVEVEVENVERPV---------------DLYKAIFSDDSE 729

Query: 178 XXXXX-FNIMRVDNQGKKAEVANTALSRLIAGDFLESLGKELGLEVP 223
                  N    + Q KK E A T L+RLIAGDFLESLGKELG EVP
Sbjct: 730 DDEDQPMNGKIQEGQEKKNEAAATTLNRLIAGDFLESLGKELGFEVP 776


>AT5G23080.2 | Symbols: TGH | SWAP
           (Suppressor-of-White-APricot)/surp domain-containing
           protein | chr5:7743226-7748889 REVERSE LENGTH=900
          Length = 900

 Score =  194 bits (494), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 114/227 (50%), Positives = 134/227 (59%), Gaps = 20/227 (8%)

Query: 1   MSEAARAHERLSFEAAAEAIEKGKQGRGSKLSIPSSMDFITGGVMQFTSGGVELKKDQQT 60
           MSE+ARA ERL FEAAAEAIEKGK  +  + +    +DF+ GG +QFTSGG E  KD   
Sbjct: 536 MSESARAQERLDFEAAAEAIEKGKAYKEVRRATEQPLDFLAGG-LQFTSGGTEQIKDTGV 594

Query: 61  EDFMEKKMYPKREEFQWRPSPLLCKRFDLIDPYMGKPAPAPRIRGKIDSLIFTSDSVKGT 120
            D    K YPKREEFQWRPSPLLCKRFDL DP+MGK  PAPR R K+DSL+F  D+VK  
Sbjct: 595 VDMKSSKTYPKREEFQWRPSPLLCKRFDLPDPFMGKLPPAPRARNKMDSLVFLPDTVKAA 654

Query: 121 ---RVEEPVIFKKDVSHLQQSANKDRDKIVAENKIEEDVEVENIERPVDLYKAIFXXXXX 177
              +V E  + KK+ S  +     + + +                   DLYKAIF     
Sbjct: 655 SARQVSESQVPKKETSIEEPEVEVEVENVERPV---------------DLYKAIFSDDSE 699

Query: 178 XXXXX-FNIMRVDNQGKKAEVANTALSRLIAGDFLESLGKELGLEVP 223
                  N    + Q KK E A T L+RLIAGDFLESLGKELG EVP
Sbjct: 700 DDEDQPMNGKIQEGQEKKNEAAATTLNRLIAGDFLESLGKELGFEVP 746