Miyakogusa Predicted Gene

Lj4g3v1769420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1769420.1 Non Chatacterized Hit- tr|Q3M3C6|Q3M3C6_ANAVT
Putative uncharacterized protein OS=Anabaena
variabili,29.52,5e-16,DUF3353,Protein of unknown function
DUF3353,CUFF.49687.1
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23040.1 | Symbols: CDF1 | Protein of unknown function (DUF33...   336   7e-93
AT3G51140.1 | Symbols:  | Protein of unknown function (DUF3353) ...   144   7e-35

>AT5G23040.1 | Symbols: CDF1 | Protein of unknown function (DUF3353)
           | chr5:7729465-7730930 REVERSE LENGTH=258
          Length = 258

 Score =  336 bits (862), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 163/230 (70%), Positives = 190/230 (82%), Gaps = 6/230 (2%)

Query: 20  LPLRENTKRLPNVSFRT-RCAVDSPYEGNVQKFPRVNVWDPYRRLGVGRDASEEEIWGSR 78
           LP R  ++     SF+T +C VDS Y GNV  FPR  VWDPY+RLGV   ASEEEIW SR
Sbjct: 34  LPFRNVSR-----SFKTVKCTVDSSYGGNVPTFPRTRVWDPYKRLGVSPYASEEEIWASR 88

Query: 79  NFLLQQYAGHERSEESIEAAFEKILTASFLQRKKTKINLKSRLKKKVEESPPWVKSLLNF 138
           NFLLQQYAGHERSEESIE AFEK+L +SF++RKKTKINLKS+LKKKVEESPPW+K+LL+F
Sbjct: 89  NFLLQQYAGHERSEESIEGAFEKLLMSSFIRRKKTKINLKSKLKKKVEESPPWLKALLDF 148

Query: 139 VELPPTEIILRRLFLFAFMGAWSIMNSAETGPAFQVAISLGAWIFLLNEKTKSFSRAFII 198
           VE+PP + I RRLFLFAFMG WSIMNSAE GPAFQVA+SL A ++ LNEKTKS  RA +I
Sbjct: 149 VEMPPMDTIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACVYFLNEKTKSLGRACLI 208

Query: 199 GFGALVAGWVGGSVLVPSIPSMLLRPEWTLELLTSLVVYVFLFIACTFLK 248
           G GALVAGW  GS+++P IP+ L++P WTLELLTSLV YVFLF++CTFLK
Sbjct: 209 GIGALVAGWFCGSLIIPMIPTFLIQPTWTLELLTSLVAYVFLFLSCTFLK 258


>AT3G51140.1 | Symbols:  | Protein of unknown function (DUF3353) |
           chr3:18998182-18999437 FORWARD LENGTH=278
          Length = 278

 Score =  144 bits (362), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 128/202 (63%), Gaps = 10/202 (4%)

Query: 51  FPRVNVWDPYRRLGVGRDASEEEIWGSRNFLLQQYAGHERSEESIEAAFEKILTASFLQR 110
           FPR+NV DPY+RLG+ R ASE+EI G+RNFL+QQYAGH+ S ++IE+A +KI+   F +R
Sbjct: 83  FPRINVKDPYKRLGISRMASEDEIQGARNFLIQQYAGHKPSVDAIESAHDKIIMQKFHER 142

Query: 111 KKTKINLKSRLKKKVEESPPWVKSLLNFV----ELPPTEIILRRLFLFAFMGAWSIMNSA 166
           K  KI++  ++ ++V +S      ++NFV    + PP  ++++    FA +G  +++   
Sbjct: 143 KNPKIDISKKV-RQVRQS-----KVVNFVFERFQTPPNAVLVKTAVTFAVLGVLTVLFPT 196

Query: 167 ETGPAFQVAISLGAWIFLLNEKTKSFSRAFIIGFGALVAGWVGGSVLVPSIPSMLLRPEW 226
           E GP  QV +SL A  + ++++ +     F+ G GA +  W+ G+ L+ S+    ++   
Sbjct: 197 EEGPTLQVLLSLIATFYFIHQRLQKKLWTFLYGAGAFIFSWLVGTFLMVSVIPPFIKGPR 256

Query: 227 TLELLTSLVVYVFLFIACTFLK 248
             E+++SL+ YV L++A ++L+
Sbjct: 257 GFEVMSSLLSYVLLWVASSYLR 278