Miyakogusa Predicted Gene

Lj4g3v1748330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1748330.1 Non Chatacterized Hit- tr|G7JT41|G7JT41_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,90.13,0,B5,tRNA
synthetase, B5-domain; pheT_arch: phenylalanine--tRNA ligase, beta
subuni,Phenylalanyl-tRNA ,CUFF.49704.1
         (485 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G72550.2 | Symbols:  | tRNA synthetase beta subunit family pr...   666   0.0  
AT1G72550.1 | Symbols:  | tRNA synthetase beta subunit family pr...   665   0.0  

>AT1G72550.2 | Symbols:  | tRNA synthetase beta subunit family
           protein | chr1:27319999-27323908 REVERSE LENGTH=584
          Length = 584

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/460 (71%), Positives = 376/460 (81%), Gaps = 12/460 (2%)

Query: 1   MPTVSVGRDRLYAALGRTYTQEEFEDLCFSFGIELDDVTTEKAIVRKXXXXXXXXXXXXX 60
           MPT+SVGRDRL+AALG +YTQE+FE+LCFSFGIELDDVTTEKAI+RK             
Sbjct: 1   MPTISVGRDRLFAALGESYTQEKFEELCFSFGIELDDVTTEKAIIRKEKHIDEEADDDEE 60

Query: 61  XVIYKIEVPANRYDLLCLEGLAQALRVFCGFQEIPTYKLADVGKDAMLKMHVKPETKKIR 120
            + YKIE+PANR DLLCLEGLAQ+LRVF   QEIPTY LAD+ KD +L+M+VKPET KIR
Sbjct: 61  II-YKIEIPANRPDLLCLEGLAQSLRVFIEKQEIPTYTLADISKDKILQMNVKPETSKIR 119

Query: 121 EFIVCAVLRGITFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALSP 180
            F+VCAVLRG+TFD+ARYNSFIDLQDKLHQNICRRR+LVAIGTHDLDTL+GPFTYEAL P
Sbjct: 120 PFVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTYEALPP 179

Query: 181 SSINFTPLKQERSFSAEKLMEFYKSDMKLKKFLHIIEKSDVYPVIYDSKRRVLSLPPIIN 240
           + INF PLKQ +SF A++L+EFYKSDMKLKKFLHIIE S V+PV+YDSKR VLSLPPIIN
Sbjct: 180 TDINFVPLKQTKSFRADELIEFYKSDMKLKKFLHIIENSPVFPVLYDSKRTVLSLPPIIN 239

Query: 241 GAHSAITLETKNVFIECTATDLTKAKIVLNTMVTAFSEFCENKFVIEPVEVINSEGKSEI 300
           GAHSAITL+TKNVFIECTATDLTKAKIVLNTMVT FSEFC  KF IEPVEV   +GKS I
Sbjct: 240 GAHSAITLQTKNVFIECTATDLTKAKIVLNTMVTTFSEFCARKFEIEPVEVTYDDGKSYI 299

Query: 301 YPDLSVYNMEVSLSYINGLIGVSLEAEEVTKFLNRMQLHAKQSTSDKKQCNFVVSVPPTR 360
           YPDL+VY+MEV LS+I   IGVSL+ E+VT  L RMQL A+Q+ S   QC   V VPP+R
Sbjct: 300 YPDLAVYDMEVPLSFITDSIGVSLKVEQVTSLLTRMQLQAEQAKSSDNQCAIKVHVPPSR 359

Query: 361 SDVLHPCDVMEDVAIAYGFNAIKDKAIVDNKGSKRLAASLTLLPLNEISDLIRKEVTMIG 420
           SDVLHPCDVMEDVAIAYGFN I            R  AS+  L LNE++DL+R E+ M  
Sbjct: 360 SDVLHPCDVMEDVAIAYGFNNI----------PTRKPASIKPLTLNELTDLLRIEIAMCV 409

Query: 421 FTEVLTFILCSKKENFAMLNRKDDKSKAVIIGNPRSSDFE 460
           +TEV+T++LCS KENFAMLNR+D  S AVI+GNPRS+DFE
Sbjct: 410 YTEVVTWLLCSHKENFAMLNREDVNS-AVIVGNPRSADFE 448


>AT1G72550.1 | Symbols:  | tRNA synthetase beta subunit family
           protein | chr1:27319947-27323908 REVERSE LENGTH=598
          Length = 598

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/460 (71%), Positives = 376/460 (81%), Gaps = 12/460 (2%)

Query: 1   MPTVSVGRDRLYAALGRTYTQEEFEDLCFSFGIELDDVTTEKAIVRKXXXXXXXXXXXXX 60
           MPT+SVGRDRL+AALG +YTQE+FE+LCFSFGIELDDVTTEKAI+RK             
Sbjct: 1   MPTISVGRDRLFAALGESYTQEKFEELCFSFGIELDDVTTEKAIIRKEKHIDEEADDDEE 60

Query: 61  XVIYKIEVPANRYDLLCLEGLAQALRVFCGFQEIPTYKLADVGKDAMLKMHVKPETKKIR 120
            + YKIE+PANR DLLCLEGLAQ+LRVF   QEIPTY LAD+ KD +L+M+VKPET KIR
Sbjct: 61  II-YKIEIPANRPDLLCLEGLAQSLRVFIEKQEIPTYTLADISKDKILQMNVKPETSKIR 119

Query: 121 EFIVCAVLRGITFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALSP 180
            F+VCAVLRG+TFD+ARYNSFIDLQDKLHQNICRRR+LVAIGTHDLDTL+GPFTYEAL P
Sbjct: 120 PFVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTYEALPP 179

Query: 181 SSINFTPLKQERSFSAEKLMEFYKSDMKLKKFLHIIEKSDVYPVIYDSKRRVLSLPPIIN 240
           + INF PLKQ +SF A++L+EFYKSDMKLKKFLHIIE S V+PV+YDSKR VLSLPPIIN
Sbjct: 180 TDINFVPLKQTKSFRADELIEFYKSDMKLKKFLHIIENSPVFPVLYDSKRTVLSLPPIIN 239

Query: 241 GAHSAITLETKNVFIECTATDLTKAKIVLNTMVTAFSEFCENKFVIEPVEVINSEGKSEI 300
           GAHSAITL+TKNVFIECTATDLTKAKIVLNTMVT FSEFC  KF IEPVEV   +GKS I
Sbjct: 240 GAHSAITLQTKNVFIECTATDLTKAKIVLNTMVTTFSEFCARKFEIEPVEVTYDDGKSYI 299

Query: 301 YPDLSVYNMEVSLSYINGLIGVSLEAEEVTKFLNRMQLHAKQSTSDKKQCNFVVSVPPTR 360
           YPDL+VY+MEV LS+I   IGVSL+ E+VT  L RMQL A+Q+ S   QC   V VPP+R
Sbjct: 300 YPDLAVYDMEVPLSFITDSIGVSLKVEQVTSLLTRMQLQAEQAKSSDNQCAIKVHVPPSR 359

Query: 361 SDVLHPCDVMEDVAIAYGFNAIKDKAIVDNKGSKRLAASLTLLPLNEISDLIRKEVTMIG 420
           SDVLHPCDVMEDVAIAYGFN I            R  AS+  L LNE++DL+R E+ M  
Sbjct: 360 SDVLHPCDVMEDVAIAYGFNNI----------PTRKPASIKPLTLNELTDLLRIEIAMCV 409

Query: 421 FTEVLTFILCSKKENFAMLNRKDDKSKAVIIGNPRSSDFE 460
           +TEV+T++LCS KENFAMLNR+D  S AVI+GNPRS+DFE
Sbjct: 410 YTEVVTWLLCSHKENFAMLNREDVNS-AVIVGNPRSADFE 448