Miyakogusa Predicted Gene

Lj4g3v1736180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1736180.1 Non Chatacterized Hit- tr|I1IR12|I1IR12_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,44.26,1e-18,coiled-coil,NULL; seg,NULL,CUFF.49674.1
         (319 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08120.1 | Symbols: MPB2C | movement protein binding protein ...   231   4e-61

>AT5G08120.1 | Symbols: MPB2C | movement protein binding protein 2C
           | chr5:2600743-2602678 REVERSE LENGTH=326
          Length = 326

 Score =  231 bits (590), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/333 (42%), Positives = 189/333 (56%), Gaps = 36/333 (10%)

Query: 2   QHFVD---SGGFADPSS-------------------AAANANLDRVLFNDLVEIVPLVQS 39
           QHF+D     GF D SS                    + N NLDR L  DLVE+VPL++ 
Sbjct: 6   QHFMDLQSDSGFGDDSSWLAGDDDLRLSPHQSAAGTNSGNENLDRRLLKDLVEMVPLIEH 65

Query: 40  LIDQDRKASRSFTRRGSMVYTKTPTREALFKRATDSKSRNTSQSIPAKKKRDPEDKEQGK 99
            ++   K   SF RRGSM+YTK P++E+L +R      RN SQ++P +KKRD E  +   
Sbjct: 66  YMEH--KERSSFKRRGSMIYTKMPSKESLSRRG-----RNASQTVPGRKKRDQEGNDDVM 118

Query: 100 NGCNXXXXXXXXXXXXRALTSEKDREELAILKEQVEVLQKQLWEKGELLKSAENSRDQMN 159
           N               +AL    ++EE++ L+EQV  LQ +L EK E+LKS E S++Q+N
Sbjct: 119 NNSREDDENA------KALAG-AEKEEMSRLREQVNDLQTKLSEKEEVLKSMEMSKNQVN 171

Query: 160 AFNAKLDELKHQVSEKDSLLKYTQQQLSDAKIKLADKQAAFEKIQWETMTSNKKVEKLQG 219
               KL+     V+EKD L+K  Q QLSD KIKLADKQAA EK QWE  T+  +  KLQ 
Sbjct: 172 EIQEKLEATNRLVAEKDMLIKSMQLQLSDTKIKLADKQAALEKTQWEAKTTGTRAIKLQE 231

Query: 220 ELDSIQADISTFTLLLESLXXXXXXXXXXXXXXXXXXFNQRADIDDLDEIELQKMEEARK 279
           +LD+++ DISTFT + E+L                  F+    +DD+DE +L+KMEEAR 
Sbjct: 232 QLDAVEGDISTFTRVFETLAKTDSKKPDRDYDAVPYEFDHLPYLDDVDETDLRKMEEARL 291

Query: 280 AYISAVAVVKEKRDEESIAAAASARLHLQSFIF 312
           AY++AV   KE+ DEES+  AA AR +LQS  F
Sbjct: 292 AYVAAVNTAKEREDEESLVMAAQARAYLQSLAF 324