Miyakogusa Predicted Gene

Lj4g3v1736170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1736170.1 Non Chatacterized Hit- tr|D7MUF1|D7MUF1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,30.4,4e-17,seg,NULL,gene.g55518.t1.1
         (266 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60880.1 | Symbols: BASL | breaking of asymmetry in the stoma...    90   2e-18

>AT5G60880.1 | Symbols: BASL | breaking of asymmetry in the stomatal
           lineage | chr5:24488553-24489703 REVERSE LENGTH=262
          Length = 262

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 121/274 (44%), Gaps = 26/274 (9%)

Query: 1   MPRLTRLIVRDWSSCFLPHKLPLD---DHGVASAPRVPVRNLAFDKRNQKRFNIIHTNT- 56
           +P+L    VRDW+SCFL  K+PLD   D    +       NL F +  +K  +     + 
Sbjct: 7   IPKLVTWRVRDWASCFLACKIPLDGDEDGANNNGNTTNNNNLTFKRIKRKIKSTKKKRSE 66

Query: 57  --LSWPXXXXXXXXXXXXXXMVKEKQGVSVENRIDGSTWSLSLDEDYIVFCFE-ENQEFG 113
             LS                 V      S   R+      +S +  +IVFCF+ E+  F 
Sbjct: 67  RKLSLSPPGTRHHHLHLRSSSVSPTTSGSQHRRLSWPQPPVSEESGFIVFCFDREDGGFD 126

Query: 114 AVKDERSVKSENLMRGLNVMHKNSKPLNSKVKYG-EGAKVVSKHNILVKRPNDSKEHDQD 172
            VK+ +  K E      +   K+ + +N K+ YG +G     K+N    +  +  ++D  
Sbjct: 127 VVKEGKQEKKETE----SSSEKSPRTVNRKLIYGDQGVGGTEKNNSPETKGTEQDQND-- 180

Query: 173 CYREDMEKEMVHTSRQKKRDSTSSVCQVEGIEDCGGMVSAESRNSVQSEGSRGSFAFPVL 232
                      +TS Q  +D +S V +    E+        S +S   EG RGSFAFP+L
Sbjct: 181 -----------NTSCQGTKDVSSDVTERTKEEEDIDASDKSSGSSHSDEG-RGSFAFPIL 228

Query: 233 GWEWIGSPVHMPRAEDVHLKNHKASYVGFQCCMF 266
           G EW+GSP  MP ++D+  K  K   +GFQCC F
Sbjct: 229 GVEWMGSPAKMPESDDLSPKKQKPVALGFQCCRF 262