Miyakogusa Predicted Gene

Lj4g3v1721970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1721970.1 Non Chatacterized Hit- tr|J4IAF8|J4IAF8_9APHY
Uncharacterized protein OS=Fibroporia radiculosa PE=4
,31.3,2e-18,Rhomboid-like,NULL; no description,NULL; seg,NULL;
Rhomboid,Peptidase S54, rhomboid domain,CUFF.49657.1
         (330 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18600.1 | Symbols: ATRBL12, RBL12 | RHOMBOID-like protein 12...   263   1e-70
AT1G74130.1 | Symbols:  | Rhomboid-related intramembrane serine ...   175   4e-44
AT1G74130.2 | Symbols:  | Rhomboid-related intramembrane serine ...   152   3e-37
AT1G74140.5 | Symbols:  | Rhomboid-related intramembrane serine ...   149   2e-36
AT1G74140.1 | Symbols:  | Rhomboid-related intramembrane serine ...   148   4e-36
AT1G74140.4 | Symbols:  | Rhomboid-related intramembrane serine ...   139   2e-33
AT1G74140.3 | Symbols:  | Rhomboid-related intramembrane serine ...   120   2e-27
AT1G74140.2 | Symbols:  | Rhomboid-related intramembrane serine ...   119   3e-27

>AT1G18600.1 | Symbols: ATRBL12, RBL12 | RHOMBOID-like protein 12 |
           chr1:6400647-6402587 FORWARD LENGTH=336
          Length = 336

 Score =  263 bits (671), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 135/208 (64%), Positives = 171/208 (82%), Gaps = 3/208 (1%)

Query: 126 LDTLTPDNMVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRLHTLITNAFSHVD 185
           L  L+  ++V GL+IAN  +F++WR+ +++FM+NNF ISLDN KSGRLHTLIT+AFSH+D
Sbjct: 127 LQGLSDRDVVLGLVIANAGVFVMWRVFNQQFMMNNFMISLDNFKSGRLHTLITSAFSHID 186

Query: 186 AWHIISNMLGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQSS---KGWR 242
             HI+SNM+GLYFFGT++  NFGP FLLKLYLAGA+GGSVFYL+H AY A +S   +G  
Sbjct: 187 IGHIVSNMIGLYFFGTSIARNFGPQFLLKLYLAGALGGSVFYLIHHAYMAATSPKGQGAF 246

Query: 243 FSNHSKELALGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEG 302
             + S+   LGASGAVNA+MLL IFL P+AT+Y + FIPVPA+LLG+F+IGKD+LRI EG
Sbjct: 247 VRDPSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIFLIGKDILRITEG 306

Query: 303 DTSISGSAHLGGATVGAIAWALVRKGRF 330
           +++ISGSAHLGGA V AIAWA +RKGRF
Sbjct: 307 NSNISGSAHLGGAAVAAIAWARIRKGRF 334


>AT1G74130.1 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27873687-27875897 FORWARD
           LENGTH=322
          Length = 322

 Score =  175 bits (443), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 93/207 (44%), Positives = 134/207 (64%), Gaps = 9/207 (4%)

Query: 132 DNMVFGLIIANTAIFLLWRI--ADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHI 189
           + +VFGL+IAN A+F +WR+   D  +M+ NF +S  +  +GR+HTLIT+ FSHV A HI
Sbjct: 115 NGVVFGLVIANAAVFTMWRVLGKDNMWMVKNFMLSRYSFMTGRIHTLITSGFSHVGATHI 174

Query: 190 ISNMLGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQSSKGWRFSNHSKE 249
           I NM+GL +FG  +  +FGP +LLKLY AGA+GGSVF+L   A    S KG R     + 
Sbjct: 175 ILNMMGLCYFGARIARSFGPRYLLKLYFAGALGGSVFFLSSHALSVISLKGQRVVPKDQL 234

Query: 250 LA----LGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEG--D 303
                 LGA+G V A+ LL + L+PK T YF L + VP +  G++ +G ++++++EG  +
Sbjct: 235 KVPIGKLGANGPVYAITLLDMLLYPKVTTYFGLMLRVP-VFAGIYSLGLNIIKMLEGKNN 293

Query: 304 TSISGSAHLGGATVGAIAWALVRKGRF 330
            +++    LGG  V  IAWA +RKGRF
Sbjct: 294 NTLTSLDQLGGVVVAVIAWARIRKGRF 320


>AT1G74130.2 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27873687-27875817 FORWARD
           LENGTH=296
          Length = 296

 Score =  152 bits (384), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/182 (45%), Positives = 119/182 (65%), Gaps = 8/182 (4%)

Query: 132 DNMVFGLIIANTAIFLLWRI--ADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHI 189
           + +VFGL+IAN A+F +WR+   D  +M+ NF +S  +  +GR+HTLIT+ FSHV A HI
Sbjct: 115 NGVVFGLVIANAAVFTMWRVLGKDNMWMVKNFMLSRYSFMTGRIHTLITSGFSHVGATHI 174

Query: 190 ISNMLGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQSSKGWRFSNHSKE 249
           I NM+GL +FG  +  +FGP +LLKLY AGA+GGSVF+L   A    S KG R     + 
Sbjct: 175 ILNMMGLCYFGARIARSFGPRYLLKLYFAGALGGSVFFLSSHALSVISLKGQRVVPKDQL 234

Query: 250 LA----LGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIME-GDT 304
                 LGA+G V A+ LL + L+PK T YF L + VP +  G++ +G ++++++E G T
Sbjct: 235 KVPIGKLGANGPVYAITLLDMLLYPKVTTYFGLMLRVP-VFAGIYSLGLNIIKMLEVGKT 293

Query: 305 SI 306
           +I
Sbjct: 294 TI 295


>AT1G74140.5 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27876928-27879584 FORWARD
           LENGTH=320
          Length = 320

 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 127/206 (61%), Gaps = 13/206 (6%)

Query: 132 DNMVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIIS 191
           + +VFGL+IAN A+F +WR++D  +M++ ++ +     SG +HTLIT+ FSH+    II 
Sbjct: 121 NGVVFGLVIANAAVFTMWRVSDRSWMLSTYSFT-----SGYIHTLITSGFSHIGTSQIIL 175

Query: 192 NMLGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQ-SSKGWRFSNHSKEL 250
           NM+G+ +FG+ +    GP +LLKLY AGA+GGSV +L + A  A    +G    +H    
Sbjct: 176 NMIGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLATLKGEGVVIKDHQSTA 235

Query: 251 A----LGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEGDTS- 305
                LGA G++ A+ LL +F++PK T YF L + V  ++  +  +G ++L I EG  + 
Sbjct: 236 PISQLLGADGSMFAIALLDMFIYPKVTTYFALMLRVH-VMFRIINLGVEILNIPEGGPNH 294

Query: 306 -ISGSAHLGGATVGAIAWALVRKGRF 330
             S S  LGG  V A+AWA ++KGRF
Sbjct: 295 IASSSGQLGGVVVAAMAWARIKKGRF 320


>AT1G74140.1 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27876928-27879584 FORWARD
           LENGTH=317
          Length = 317

 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 126/206 (61%), Gaps = 16/206 (7%)

Query: 132 DNMVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIIS 191
           + +VFGL+IAN A+F +WR++D  +M++ ++ +     SG +HTLIT+ FSH+    II 
Sbjct: 121 NGVVFGLVIANAAVFTMWRVSDRSWMLSTYSFT-----SGYIHTLITSGFSHIGTSQIIL 175

Query: 192 NMLGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQ-SSKGWRFSNHSKEL 250
           NM+G+ +FG+ +    GP +LLKLY AGA+GGSV +L + A  A    +G    +H    
Sbjct: 176 NMIGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLATLKGEGVVIKDHQSTA 235

Query: 251 A----LGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEGDTS- 305
                LGA G++ A+ LL +F++PK T YF L + V  I+     +G ++L I EG  + 
Sbjct: 236 PISQLLGADGSMFAIALLDMFIYPKVTTYFALMLRVHRII----NLGVEILNIPEGGPNH 291

Query: 306 -ISGSAHLGGATVGAIAWALVRKGRF 330
             S S  LGG  V A+AWA ++KGRF
Sbjct: 292 IASSSGQLGGVVVAAMAWARIKKGRF 317


>AT1G74140.4 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27876928-27879584 FORWARD
           LENGTH=306
          Length = 306

 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 23/204 (11%)

Query: 132 DNMVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIIS 191
           + +VFGL+IAN A+F +WR++D  +M++ ++ +     SG +HTLIT+ FSH+    II 
Sbjct: 121 NGVVFGLVIANAAVFTMWRVSDRSWMLSTYSFT-----SGYIHTLITSGFSHIGTSQIIL 175

Query: 192 NMLGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQ-SSKGWRFSNHSKEL 250
           NM+G+ +FG+ +    GP +LLKLY AGA+GGSV +L + A  A    +G    +H    
Sbjct: 176 NMIGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLATLKGEGVVIKDHQSTA 235

Query: 251 A----LGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEGDTSI 306
                LGA G++ A+ LL +F++PK T YF L + V  +  G   I              
Sbjct: 236 PISQLLGADGSMFAIALLDMFIYPKVTTYFALMLRVHVMFGGPNHIA------------- 282

Query: 307 SGSAHLGGATVGAIAWALVRKGRF 330
           S S  LGG  V A+AWA ++KGRF
Sbjct: 283 SSSGQLGGVVVAAMAWARIKKGRF 306


>AT1G74140.3 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27876928-27879584 FORWARD
           LENGTH=301
          Length = 301

 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 8/175 (4%)

Query: 163 ISLDNIKSGRLHTLITNAFSHVDAWHIISNMLGLYFFGTNVVSNFGPGFLLKLYLAGAVG 222
           +S  +  SG +HTLIT+ FSH+    II NM+G+ +FG+ +    GP +LLKLY AGA+G
Sbjct: 128 LSTYSFTSGYIHTLITSGFSHIGTSQIILNMIGISYFGSRIARTLGPLYLLKLYFAGALG 187

Query: 223 GSVFYLVHQAYKAQ-SSKGWRFSNHSKELA----LGASGAVNAVMLLQIFLFPKATIYFD 277
           GSV +L + A  A    +G    +H         LGA G++ A+ LL +F++PK T YF 
Sbjct: 188 GSVCFLSYHALLATLKGEGVVIKDHQSTAPISQLLGADGSMFAIALLDMFIYPKVTTYFA 247

Query: 278 LFIPVPAILLGVFMIGKDMLRIMEGDTS--ISGSAHLGGATVGAIAWALVRKGRF 330
           L + V  ++  +  +G ++L I EG  +   S S  LGG  V A+AWA ++KGRF
Sbjct: 248 LMLRVH-VMFRIINLGVEILNIPEGGPNHIASSSGQLGGVVVAAMAWARIKKGRF 301


>AT1G74140.2 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27876928-27879584 FORWARD
           LENGTH=298
          Length = 298

 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 103/175 (58%), Gaps = 11/175 (6%)

Query: 163 ISLDNIKSGRLHTLITNAFSHVDAWHIISNMLGLYFFGTNVVSNFGPGFLLKLYLAGAVG 222
           +S  +  SG +HTLIT+ FSH+    II NM+G+ +FG+ +    GP +LLKLY AGA+G
Sbjct: 128 LSTYSFTSGYIHTLITSGFSHIGTSQIILNMIGISYFGSRIARTLGPLYLLKLYFAGALG 187

Query: 223 GSVFYLVHQAYKAQ-SSKGWRFSNHSKELA----LGASGAVNAVMLLQIFLFPKATIYFD 277
           GSV +L + A  A    +G    +H         LGA G++ A+ LL +F++PK T YF 
Sbjct: 188 GSVCFLSYHALLATLKGEGVVIKDHQSTAPISQLLGADGSMFAIALLDMFIYPKVTTYFA 247

Query: 278 LFIPVPAILLGVFMIGKDMLRIMEGDTS--ISGSAHLGGATVGAIAWALVRKGRF 330
           L + V  I+     +G ++L I EG  +   S S  LGG  V A+AWA ++KGRF
Sbjct: 248 LMLRVHRII----NLGVEILNIPEGGPNHIASSSGQLGGVVVAAMAWARIKKGRF 298