Miyakogusa Predicted Gene

Lj4g3v1721930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1721930.1 tr|Q9FZ82|Q9FZ82_ARATH F25I16.5 protein
OS=Arabidopsis thaliana GN=F25I16.5 PE=4
SV=1,39.38,2e-17,seg,NULL,CUFF.49641.1
         (300 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18610.1 | Symbols:  | Galactose oxidase/kelch repeat superfa...    94   8e-20
AT1G74150.1 | Symbols:  | Galactose oxidase/kelch repeat superfa...    80   2e-15

>AT1G18610.1 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr1:6405779-6408831 FORWARD
           LENGTH=556
          Length = 556

 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 89/160 (55%), Gaps = 23/160 (14%)

Query: 1   MYYLHTGIARGS--EQRPEKLSLRKQLKLKCQEQ-NLNPGQNQGLARYGMGADTSPIMTV 57
           M+YL TG+   +  +Q    LSL+KQLK+KCQEQ + +   ++ L R  M          
Sbjct: 318 MFYLQTGLGYDARFDQNVGMLSLKKQLKIKCQEQSHASSLYDKSLVRINM---------- 367

Query: 58  LKYTQPGRQNIPVNQSLLHSGKKMFEAKVSENISDGGLTIETVIDGKPLRGVLFLNKPNS 117
                 GR N  +N    + GK MF+A+++E+   G  T+ET+IDGK LRGVLF NK +S
Sbjct: 368 ---DHQGRGNFGLNTCQFNEGKMMFQARITESYPVG-YTMETMIDGKVLRGVLFSNKRSS 423

Query: 118 LNPAGLAFSRKRTASEIDGVISNGTHPNIFKTPKVLKQNQ 157
           + PA  +FSRKR A      +SNG   N  K  + L ++Q
Sbjct: 424 ILPADQSFSRKRPA------MSNGDQDNRSKISRTLIKDQ 457


>AT1G74150.1 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr1:27880528-27883626 FORWARD
           LENGTH=569
          Length = 569

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 23/132 (17%)

Query: 1   MYYLHT--GIARGSEQRPEKLSLRKQLKLKCQEQNLNPGQNQGLARYGMGADTSPIMTVL 58
           +YYLHT         Q P + SLRKQ+KLKCQ Q L   +                    
Sbjct: 315 IYYLHTEGRYDVRFHQNPGRSSLRKQMKLKCQGQELTVAKTN------------------ 356

Query: 59  KYTQPGRQNIPVNQSLLHSGKKMFEAKVSENISDGGLTIETVIDGKPLRGVLFLNKPNSL 118
                GR+N+P+N   +   K MF+A+V+EN +  G TIET+IDGK LRGVLF N+ +S+
Sbjct: 357 --IDHGRENVPLNIGYIDQRKPMFQARVTEN-APLGYTIETIIDGKVLRGVLFSNRHSSV 413

Query: 119 NPAGLAFSRKRT 130
             A  + S ++ 
Sbjct: 414 RIADSSISSRQV 425