Miyakogusa Predicted Gene

Lj4g3v1721910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1721910.1 Non Chatacterized Hit- tr|I1JWN6|I1JWN6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,52.49,0,TCP,Transcription factor, TCP; TCP,Transcription factor
TCP subgroup; seg,NULL,CUFF.49640.1
         (363 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60970.1 | Symbols: TCP5 | TEOSINTE BRANCHED 1, cycloidea and...   162   3e-40
AT3G02150.2 | Symbols: PTF1, TFPD | plastid transcription factor...   149   2e-36
AT3G02150.1 | Symbols: PTF1, TCP13, TFPD | plastid transcription...   149   3e-36
AT5G08070.1 | Symbols: TCP17 | TCP domain protein 17 | chr5:2584...   143   2e-34
AT1G30210.2 | Symbols: TCP24 | TEOSINTE BRANCHED 1, cycloidea, a...   112   3e-25
AT1G30210.1 | Symbols: TCP24, ATTCP24 | TEOSINTE BRANCHED 1, cyc...   112   3e-25
AT4G18390.2 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and...   110   2e-24
AT4G18390.1 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and...   110   2e-24
AT1G53230.1 | Symbols: TCP3 | TEOSINTE BRANCHED 1, cycloidea and...    98   9e-21
AT3G15030.3 | Symbols: TCP4 | TCP family transcription factor 4 ...    98   1e-20
AT3G15030.2 | Symbols: TCP4 | TCP family transcription factor 4 ...    98   1e-20
AT3G15030.1 | Symbols: TCP4, MEE35 | TCP family transcription fa...    98   1e-20
AT2G31070.1 | Symbols: TCP10 | TCP domain protein 10 | chr2:1322...    94   1e-19
AT1G68800.1 | Symbols: BRC2, TCP12 | TCP domain protein 12 | chr...    77   3e-14
AT1G67260.2 | Symbols: TCP1 | TCP family transcription factor  |...    76   3e-14
AT1G67260.1 | Symbols: TCP1 | TCP family transcription factor  |...    76   3e-14
AT3G18550.2 | Symbols: BRC1, TCP18, ATTCP18 | TCP family transcr...    71   1e-12
AT3G18550.1 | Symbols: BRC1, TCP18, ATTCP18 | TCP family transcr...    71   1e-12

>AT5G60970.1 | Symbols: TCP5 | TEOSINTE BRANCHED 1, cycloidea and
           PCF transcription factor 5 | chr5:24535570-24536652
           REVERSE LENGTH=360
          Length = 360

 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 76/91 (83%), Positives = 83/91 (91%), Gaps = 2/91 (2%)

Query: 38  WT-AFRNPRIVRVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPS 96
           WT AFRNPRIVRVSR  GGKDRHSKVCTVRGLRDRRIRLSVPTAI+LYDLQDRLGLSQPS
Sbjct: 45  WTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPS 104

Query: 97  KVVDWLLEASKTDIDKLPPLQIPNCSFSQFH 127
           KV+DWLLEA+K D+DKLPPLQ P+  F+Q +
Sbjct: 105 KVIDWLLEAAKDDVDKLPPLQFPH-GFNQMY 134


>AT3G02150.2 | Symbols: PTF1, TFPD | plastid transcription factor 1
           | chr3:391522-392589 FORWARD LENGTH=355
          Length = 355

 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/126 (60%), Positives = 91/126 (72%), Gaps = 8/126 (6%)

Query: 38  WTAFRNPRIVRVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSK 97
           W   ++PRIVRVSRA GGKDRHSKVCT+RGLRDRR+RLSVPTAI+LYDLQ+RLG+ QPSK
Sbjct: 57  WMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSK 116

Query: 98  VVDWLLEASKTDIDKLPPLQIPNCSFSQF-HHQD-----QYSGNDRLSLG--VGGLFYDG 149
            VDWLL+A+K +ID+LPPL I   +FS F HHQ      Q  G D   LG  + G     
Sbjct: 117 AVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSFLNLGQRPGQDPTQLGFKINGCVQKS 176

Query: 150 TSASSQ 155
           T+ S +
Sbjct: 177 TTTSRE 182


>AT3G02150.1 | Symbols: PTF1, TCP13, TFPD | plastid transcription
           factor 1 | chr3:391522-392450 FORWARD LENGTH=278
          Length = 278

 Score =  149 bits (376), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/126 (60%), Positives = 91/126 (72%), Gaps = 8/126 (6%)

Query: 38  WTAFRNPRIVRVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSK 97
           W   ++PRIVRVSRA GGKDRHSKVCT+RGLRDRR+RLSVPTAI+LYDLQ+RLG+ QPSK
Sbjct: 57  WMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSK 116

Query: 98  VVDWLLEASKTDIDKLPPLQIPNCSFSQF-HHQD-----QYSGNDRLSLG--VGGLFYDG 149
            VDWLL+A+K +ID+LPPL I   +FS F HHQ      Q  G D   LG  + G     
Sbjct: 117 AVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSFLNLGQRPGQDPTQLGFKINGCVQKS 176

Query: 150 TSASSQ 155
           T+ S +
Sbjct: 177 TTTSRE 182


>AT5G08070.1 | Symbols: TCP17 | TCP domain protein 17 |
           chr5:2584885-2585613 FORWARD LENGTH=242
          Length = 242

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 65/79 (82%), Positives = 72/79 (91%)

Query: 41  FRNPRIVRVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVD 100
           + NPRIVRVSRA GGKDRHSKVCTVRGLRDRRIRLSV TAI++YDLQ+RLGLSQPSKV+D
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 101 WLLEASKTDIDKLPPLQIP 119
           WLLE +K D+D LPPLQ P
Sbjct: 79  WLLEVAKNDVDLLPPLQFP 97


>AT1G30210.2 | Symbols: TCP24 | TEOSINTE BRANCHED 1, cycloidea, and
           PCF family 24 | chr1:10628754-10629728 REVERSE
           LENGTH=324
          Length = 324

 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 73/122 (59%), Gaps = 13/122 (10%)

Query: 12  MKQEGTNEVKTERLISSNKALSTSRQWTAFRNP--RIVRVSRALGGKDRHSKVCTVRGLR 69
            K +     K +R    N  L   R W    NP  RI+RVSRA GGKDRHSKV T +GLR
Sbjct: 10  QKHQEQQSRKLQRFSEDNTGLM--RNWN---NPSSRIIRVSRASGGKDRHSKVLTSKGLR 64

Query: 70  DRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKLPPLQIPNCSFSQFHHQ 129
           DRRIRLSV TAI+ YDLQDRLG  QPSK V+WL+ A+   I  LP L       + F H 
Sbjct: 65  DRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLN------TNFDHL 118

Query: 130 DQ 131
           DQ
Sbjct: 119 DQ 120


>AT1G30210.1 | Symbols: TCP24, ATTCP24 | TEOSINTE BRANCHED 1,
           cycloidea, and PCF family 24 | chr1:10628754-10629728
           REVERSE LENGTH=324
          Length = 324

 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 73/122 (59%), Gaps = 13/122 (10%)

Query: 12  MKQEGTNEVKTERLISSNKALSTSRQWTAFRNP--RIVRVSRALGGKDRHSKVCTVRGLR 69
            K +     K +R    N  L   R W    NP  RI+RVSRA GGKDRHSKV T +GLR
Sbjct: 10  QKHQEQQSRKLQRFSEDNTGLM--RNWN---NPSSRIIRVSRASGGKDRHSKVLTSKGLR 64

Query: 70  DRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKLPPLQIPNCSFSQFHHQ 129
           DRRIRLSV TAI+ YDLQDRLG  QPSK V+WL+ A+   I  LP L       + F H 
Sbjct: 65  DRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLN------TNFDHL 118

Query: 130 DQ 131
           DQ
Sbjct: 119 DQ 120


>AT4G18390.2 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and
           PCF transcription factor 2 | chr4:10163212-10164309
           REVERSE LENGTH=365
          Length = 365

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 65/87 (74%)

Query: 45  RIVRVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLE 104
           RI+RVSRA GGKDRHSKV T +G RDRR+RLSV TA++ YDLQDRLG  QPSK V+WL++
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 105 ASKTDIDKLPPLQIPNCSFSQFHHQDQ 131
           A++  I +LP L   +      +HQ+Q
Sbjct: 92  AAEDSISELPSLNNTHFPTDDENHQNQ 118


>AT4G18390.1 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and
           PCF transcription factor 2 | chr4:10163212-10164309
           REVERSE LENGTH=365
          Length = 365

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 65/87 (74%)

Query: 45  RIVRVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLE 104
           RI+RVSRA GGKDRHSKV T +G RDRR+RLSV TA++ YDLQDRLG  QPSK V+WL++
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 105 ASKTDIDKLPPLQIPNCSFSQFHHQDQ 131
           A++  I +LP L   +      +HQ+Q
Sbjct: 92  AAEDSISELPSLNNTHFPTDDENHQNQ 118


>AT1G53230.1 | Symbols: TCP3 | TEOSINTE BRANCHED 1, cycloidea and
           PCF transcription factor 3 | chr1:19850260-19851435
           REVERSE LENGTH=391
          Length = 391

 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 3/70 (4%)

Query: 49  VSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKT 108
           + R+ G KDRHSKVCT +G RDRR+RLS PTAI+ YD+QDRLG  +PSK VDWL+  +K+
Sbjct: 43  IVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKS 102

Query: 109 DID---KLPP 115
            ID   +LPP
Sbjct: 103 AIDDLAQLPP 112


>AT3G15030.3 | Symbols: TCP4 | TCP family transcription factor 4 |
           chr3:5062308-5063570 FORWARD LENGTH=420
          Length = 420

 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%)

Query: 49  VSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKT 108
           + R+ G KDRHSKVCT +G RDRR+RLS  TAI+ YD+QDRLG  +PSK VDWL++ +KT
Sbjct: 39  IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKT 98

Query: 109 DIDKLPPL 116
            ID+L  L
Sbjct: 99  SIDELAEL 106


>AT3G15030.2 | Symbols: TCP4 | TCP family transcription factor 4 |
           chr3:5062308-5063570 FORWARD LENGTH=420
          Length = 420

 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%)

Query: 49  VSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKT 108
           + R+ G KDRHSKVCT +G RDRR+RLS  TAI+ YD+QDRLG  +PSK VDWL++ +KT
Sbjct: 39  IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKT 98

Query: 109 DIDKLPPL 116
            ID+L  L
Sbjct: 99  SIDELAEL 106


>AT3G15030.1 | Symbols: TCP4, MEE35 | TCP family transcription
           factor 4 | chr3:5062308-5063570 FORWARD LENGTH=420
          Length = 420

 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%)

Query: 49  VSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKT 108
           + R+ G KDRHSKVCT +G RDRR+RLS  TAI+ YD+QDRLG  +PSK VDWL++ +KT
Sbjct: 39  IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKT 98

Query: 109 DIDKLPPL 116
            ID+L  L
Sbjct: 99  SIDELAEL 106


>AT2G31070.1 | Symbols: TCP10 | TCP domain protein 10 |
           chr2:13220984-13222069 REVERSE LENGTH=361
          Length = 361

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 51/65 (78%)

Query: 49  VSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKT 108
           + RA G KDRHSKV T +G RDRR+RLS  TAI+ YD+QDRLG  +PSK VDWL++ +KT
Sbjct: 23  IIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKT 82

Query: 109 DIDKL 113
            IDKL
Sbjct: 83  AIDKL 87


>AT1G68800.1 | Symbols: BRC2, TCP12 | TCP domain protein 12 |
           chr1:25847306-25848471 REVERSE LENGTH=356
          Length = 356

 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 46/67 (68%)

Query: 47  VRVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEAS 106
           V+  R +  +DRHSK+CT +G RDRR+RLS+  A + +DLQD LG  + SK ++WL   S
Sbjct: 104 VQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKS 163

Query: 107 KTDIDKL 113
           KT I +L
Sbjct: 164 KTSIKQL 170


>AT1G67260.2 | Symbols: TCP1 | TCP family transcription factor  |
           chr1:25168152-25169307 REVERSE LENGTH=351
          Length = 351

 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 49/74 (66%)

Query: 40  AFRNPRIVRVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVV 99
            F  P + +  + +  KDRHSK+ T +G+RDRR+RLS+  A + +DLQD LG  + SK +
Sbjct: 72  GFEFPEVSKEIKKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTL 131

Query: 100 DWLLEASKTDIDKL 113
           DWLL+ S+  I ++
Sbjct: 132 DWLLKKSRKAIKEV 145


>AT1G67260.1 | Symbols: TCP1 | TCP family transcription factor  |
           chr1:25168228-25169307 REVERSE LENGTH=359
          Length = 359

 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 49/74 (66%)

Query: 40  AFRNPRIVRVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVV 99
            F  P + +  + +  KDRHSK+ T +G+RDRR+RLS+  A + +DLQD LG  + SK +
Sbjct: 72  GFEFPEVSKEIKKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTL 131

Query: 100 DWLLEASKTDIDKL 113
           DWLL+ S+  I ++
Sbjct: 132 DWLLKKSRKAIKEV 145


>AT3G18550.2 | Symbols: BRC1, TCP18, ATTCP18 | TCP family
           transcription factor  | chr3:6383769-6385604 FORWARD
           LENGTH=429
          Length = 429

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 7/100 (7%)

Query: 14  QEGTNEVKTERLISSNKALSTSRQWTAFRNPRIVRVSRALGGKDRHSKVCTVRGLRDRRI 73
           ++ T   +T  LI  ++ +STS+      +P++ +  +     DRHSK+ T +G RDRR+
Sbjct: 114 EQPTEPSETINLIEDSQRISTSQ------DPKMKKAKKP-SRTDRHSKIKTAKGTRDRRM 166

Query: 74  RLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKL 113
           RLS+  A EL+ LQD LG  + SK V+WLL  +K +I K+
Sbjct: 167 RLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEIIKI 206


>AT3G18550.1 | Symbols: BRC1, TCP18, ATTCP18 | TCP family
           transcription factor  | chr3:6383769-6385604 FORWARD
           LENGTH=433
          Length = 433

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 7/100 (7%)

Query: 14  QEGTNEVKTERLISSNKALSTSRQWTAFRNPRIVRVSRALGGKDRHSKVCTVRGLRDRRI 73
           ++ T   +T  LI  ++ +STS+      +P++ +  +     DRHSK+ T +G RDRR+
Sbjct: 114 EQPTEPSETINLIEDSQRISTSQ------DPKMKKAKKP-SRTDRHSKIKTAKGTRDRRM 166

Query: 74  RLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKL 113
           RLS+  A EL+ LQD LG  + SK V+WLL  +K +I K+
Sbjct: 167 RLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEIIKI 206