Miyakogusa Predicted Gene

Lj4g3v1720890.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1720890.1 Non Chatacterized Hit- tr|D8T4T5|D8T4T5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,35.11,0.0000000000003,seg,NULL,CUFF.49643.1
         (128 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08060.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   147   2e-36

>AT5G08060.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16
           growth stages; Has 42 Blast hits to 42 proteins in 17
           species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
           0; Plants - 41; Viruses - 0; Other Eukaryotes - 1
           (source: NCBI BLink). | chr5:2580588-2580983 FORWARD
           LENGTH=131
          Length = 131

 Score =  147 bits (370), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/123 (57%), Positives = 87/123 (70%)

Query: 5   ASNSLLSGLRRFIKKPWEITGPCADPEYKLAVPAALEYRPFCPATPKEQAIIPSSLPETV 64
           A++SL+  LRR+IKKPW+ITGPCA PEY  AVP A EYR  CPAT  E+AI+PSS PETV
Sbjct: 8   AASSLVQNLRRYIKKPWQITGPCAHPEYLEAVPKATEYRLRCPATIDEEAIVPSSDPETV 67

Query: 65  FDIKYHTXXXXXXXXXXXXTVLKKADVEKLMKERKTFDVSDFPPVYLNTVVIEDMDARGG 124
           ++I YH              VL K +V ++M E+K+FDVSDFP VYL T V ED+D RGG
Sbjct: 68  YNIVYHGRDQRRNRPPIRRYVLTKDNVVQMMNEKKSFDVSDFPKVYLTTTVEEDLDTRGG 127

Query: 125 GYQ 127
           GY+
Sbjct: 128 GYE 130