Miyakogusa Predicted Gene

Lj4g3v1720850.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1720850.2 Non Chatacterized Hit- tr|I1MT77|I1MT77_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20720 PE,78.12,0,NUCLEAR
TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN / RNA RECOGNITION MOTIF
(RRM)-CONTAINING PROTEIN,NU,CUFF.49649.2
         (401 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60980.1 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   287   8e-78
AT5G60980.2 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   283   2e-76
AT3G25150.2 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   213   2e-55
AT3G25150.1 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   212   3e-55
AT2G03640.3 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   160   2e-39
AT2G03640.2 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   159   2e-39
AT1G13730.1 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   159   3e-39
AT5G48650.1 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   159   3e-39
AT2G03640.4 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   157   2e-38
AT1G69250.1 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   156   2e-38
AT2G03640.1 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   156   2e-38
AT1G69250.2 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   128   7e-30
AT5G43960.1 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   119   4e-27
AT5G43960.2 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   117   1e-26
AT3G07250.1 | Symbols:  | nuclear transport factor 2 (NTF2) fami...   104   1e-22
AT3G55540.1 | Symbols:  | nuclear transport factor 2 (NTF2) fami...    67   3e-11

>AT5G60980.1 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr5:24543988-24546027 FORWARD LENGTH=459
          Length = 459

 Score =  287 bits (735), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 167/322 (51%), Positives = 220/322 (68%), Gaps = 17/322 (5%)

Query: 8   KAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQTFFLAPQD 67
           +AIN+ I+SL YEDYTAEI+TADAQES+E+GVIVLVTG LTG DNV +KFSQ+FFLAPQD
Sbjct: 60  QAINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQD 119

Query: 68  KGYYVLNDVFRYIEDND-TPQLNSVPVNIINENVEAHI-PESEDIHAPKHLVEDPTTSTE 125
           KGY+VLNDVFR++E+ + T Q  SVP+N    +V+A I PE   +     +  +P  S E
Sbjct: 120 KGYFVLNDVFRFLEEKEVTAQARSVPINGTTRDVQAPIEPERVVVSHEPEVEPEPVASIE 179

Query: 126 DENLNDGNEVHHPQDNEEEGSVIDEEVAVTSADISQNDVVTIRESTSTVQDDAPKKFSYA 185
           +E+L++  EV+ P D ++EG V+D E       IS N+++++       Q DAPK  SYA
Sbjct: 180 EEDLDNVAEVYDPSD-KDEGVVVDVEPIEPPTQISHNEILSV------PQGDAPKH-SYA 231

Query: 186 SIVK---SSAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEALAPSSDSVPGSSDIH 242
           SI+K   SS AP   +V     R A    + Q      + P     A + ++VP SS + 
Sbjct: 232 SILKQMKSSPAP-TTHVARNKPRPAP---VNQKLTAPPAEPAARPEASAHENVPNSSHVD 287

Query: 243 EEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRSSKHGFCFGFIEFEDASSMQ 302
            E +GHSIY+RNLPF++T  QLEEVF  FG IKH G+QVRS+K GFCFGF+EFE +S  Q
Sbjct: 288 VEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQGFCFGFVEFETSSGKQ 347

Query: 303 SALEATPIIVGERQAVVEEKRT 324
           SALEA+P+ +G+RQAVVEEK+T
Sbjct: 348 SALEASPVTIGDRQAVVEEKKT 369


>AT5G60980.2 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr5:24543988-24546027 FORWARD LENGTH=460
          Length = 460

 Score =  283 bits (723), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 167/323 (51%), Positives = 220/323 (68%), Gaps = 18/323 (5%)

Query: 8   KAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQTFFLAPQD 67
           +AIN+ I+SL YEDYTAEI+TADAQES+E+GVIVLVTG LTG DNV +KFSQ+FFLAPQD
Sbjct: 60  QAINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQD 119

Query: 68  KGYYVLNDVFRYIEDND-TPQLNSVPVNIINENVEAHI-PESEDIHAPKHLVEDPTTSTE 125
           KGY+VLNDVFR++E+ + T Q  SVP+N    +V+A I PE   +     +  +P  S E
Sbjct: 120 KGYFVLNDVFRFLEEKEVTAQARSVPINGTTRDVQAPIEPERVVVSHEPEVEPEPVASIE 179

Query: 126 DENLNDGNEVHHPQDNEEEGSVIDEEVAVTSADISQNDVVTIRESTSTVQDDAPKKFSYA 185
           +E+L++  EV+ P D ++EG V+D E       IS N+++++       Q DAPK  SYA
Sbjct: 180 EEDLDNVAEVYDPSD-KDEGVVVDVEPIEPPTQISHNEILSV------PQGDAPKH-SYA 231

Query: 186 SIV---KSSAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEALAPSSDSVPGSSDIH 242
           SI+   KSS AP   +V     R A    + Q      + P     A + ++VP SS + 
Sbjct: 232 SILKQMKSSPAP-TTHVARNKPRPA---PVNQKLTAPPAEPAARPEASAHENVPNSSHVD 287

Query: 243 EEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRSSK-HGFCFGFIEFEDASSM 301
            E +GHSIY+RNLPF++T  QLEEVF  FG IKH G+QVRS+K  GFCFGF+EFE +S  
Sbjct: 288 VEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQQGFCFGFVEFETSSGK 347

Query: 302 QSALEATPIIVGERQAVVEEKRT 324
           QSALEA+P+ +G+RQAVVEEK+T
Sbjct: 348 QSALEASPVTIGDRQAVVEEKKT 370


>AT3G25150.2 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr3:9157161-9160052 REVERSE LENGTH=587
          Length = 587

 Score =  213 bits (542), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/345 (40%), Positives = 200/345 (57%), Gaps = 29/345 (8%)

Query: 1   MTTVTTTKAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQT 60
           M+  +T +AI++ I++L Y   +AEI T D QES+  G IVLVTG LTGKD+V R FSQT
Sbjct: 156 MSITSTLQAIDKKIMALGYGVISAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQT 215

Query: 61  FFLAPQDKGYYVLNDVFRYIEDNDTPQLNSVPVNIINENVEAHIPESEDIHAPKHLVED- 119
           FFLAPQ+ GY+VLND+FR+I++      N +PVN    NV+A +   +D  A K + +D 
Sbjct: 216 FFLAPQETGYFVLNDMFRFIDEGTVVHGNQIPVN----NVQAPVNTYQDTAAAKEIPDDF 271

Query: 120 ------------PTTSTEDENLNDGNEVHHPQDNEEEGSVIDEEVAVTSADISQNDVVTI 167
                         T    +++N+  +V  P ++E+  S  +E +   + + +  +V  +
Sbjct: 272 VQEKYVQENHAVKQTEVLSKSINEPEKVFTPSEDEQV-SAAEEALVTETVNEAPIEVQKV 330

Query: 168 RESTSTVQDDAPKKFSYASIVKSSAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEA 227
            ES S    + PK+ SYASIVK          P  A+R  +    ++    +   P P  
Sbjct: 331 GESDSRT-GEIPKR-SYASIVKVMKENA---APMSASRTPTKVEPKKQEDQAIHIPLPTP 385

Query: 228 LAPSSDS-----VPGSSDIHEEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVR 282
           L+  SDS     V  ++  +E A G SIY++ LP +AT   LE  F KFG I+  G+QVR
Sbjct: 386 LSEKSDSGANVAVNENNQENERALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVR 445

Query: 283 SSKHGFCFGFIEFEDASSMQSALEATPIIVGERQAVVEEKRTTTR 327
           S K GFCFGF+EFE ASSMQSA+EA+P+++   + VVEEKR+T R
Sbjct: 446 SQK-GFCFGFVEFESASSMQSAIEASPVMLNGHKVVVEEKRSTAR 489


>AT3G25150.1 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr3:9157161-9159362 REVERSE LENGTH=488
          Length = 488

 Score =  212 bits (540), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/345 (40%), Positives = 200/345 (57%), Gaps = 29/345 (8%)

Query: 1   MTTVTTTKAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQT 60
           M+  +T +AI++ I++L Y   +AEI T D QES+  G IVLVTG LTGKD+V R FSQT
Sbjct: 57  MSITSTLQAIDKKIMALGYGVISAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQT 116

Query: 61  FFLAPQDKGYYVLNDVFRYIEDNDTPQLNSVPVNIINENVEAHIPESEDIHAPKHLVED- 119
           FFLAPQ+ GY+VLND+FR+I++      N +PVN    NV+A +   +D  A K + +D 
Sbjct: 117 FFLAPQETGYFVLNDMFRFIDEGTVVHGNQIPVN----NVQAPVNTYQDTAAAKEIPDDF 172

Query: 120 ------------PTTSTEDENLNDGNEVHHPQDNEEEGSVIDEEVAVTSADISQNDVVTI 167
                         T    +++N+  +V  P ++E+  S  +E +   + + +  +V  +
Sbjct: 173 VQEKYVQENHAVKQTEVLSKSINEPEKVFTPSEDEQV-SAAEEALVTETVNEAPIEVQKV 231

Query: 168 RESTSTVQDDAPKKFSYASIVKSSAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEA 227
            ES S    + PK+ SYASIVK          P  A+R  +    ++    +   P P  
Sbjct: 232 GESDSRT-GEIPKR-SYASIVKVMKENA---APMSASRTPTKVEPKKQEDQAIHIPLPTP 286

Query: 228 LAPSSDS-----VPGSSDIHEEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVR 282
           L+  SDS     V  ++  +E A G SIY++ LP +AT   LE  F KFG I+  G+QVR
Sbjct: 287 LSEKSDSGANVAVNENNQENERALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVR 346

Query: 283 SSKHGFCFGFIEFEDASSMQSALEATPIIVGERQAVVEEKRTTTR 327
           S K GFCFGF+EFE ASSMQSA+EA+P+++   + VVEEKR+T R
Sbjct: 347 SQK-GFCFGFVEFESASSMQSAIEASPVMLNGHKVVVEEKRSTAR 390


>AT2G03640.3 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr2:1104525-1106418 REVERSE LENGTH=454
          Length = 454

 Score =  160 bits (405), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 178/339 (52%), Gaps = 52/339 (15%)

Query: 1   MTTVTTTKAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQT 60
           + T+ + K IN+ I+S++Y+    EI TAD+Q + + GV+ LVTG + G D   RKFSQ+
Sbjct: 53  IVTIKSLKGINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQS 112

Query: 61  FFLAPQDKGYYVLNDVFRYIED-----------NDTPQLNSVPVNIINENVEAHIPESED 109
           FFL  ++  Y+VLND FRY+ D            ++   N++     NE+VEA I  +E 
Sbjct: 113 FFLVSRNGSYFVLNDTFRYVSDEFVEPEATKEVEESQSTNAITAEPANESVEAVIVPTE- 171

Query: 110 IHAPKHLVEDPTTSTEDENLNDGNEVHHPQDNEEEGSVIDEEVAVTSADISQNDVVTIRE 169
               K  V  P ++  +          H +  EE+  V++E  ++  A            
Sbjct: 172 ---AKTTVTKPASAIPN---------GHAKVPEEK--VVNENSSLPKA------------ 205

Query: 170 STSTVQDDAPKKFSYASIVKSSAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEALA 229
           + + +Q++ PKK S+A IV+S A        S       A  +++ P   K    PE  A
Sbjct: 206 AEAKLQEEVPKK-SFALIVQSLAQ-------SAGTLQVKASPVKRKP-VEKPVAAPERKA 256

Query: 230 PSSDSVPGSSD-IHEEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRS-SKHG 287
           PS      S++ I  +A+G SI++ NLP +AT+EQL E F  FG I+  G+QVRS  +  
Sbjct: 257 PSPIRKQASAESIKPQAQGSSIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKK 316

Query: 288 FCFGFIEFEDASSMQSALEA---TPIIVGERQAVVEEKR 323
            C GF+ FE+  ++++  +A   +PI +G R+A +EEKR
Sbjct: 317 NCIGFVAFENGEAVKNVFQAHRESPIRIGNRRASIEEKR 355


>AT2G03640.2 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr2:1104525-1106418 REVERSE LENGTH=423
          Length = 423

 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 178/339 (52%), Gaps = 52/339 (15%)

Query: 1   MTTVTTTKAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQT 60
           + T+ + K IN+ I+S++Y+    EI TAD+Q + + GV+ LVTG + G D   RKFSQ+
Sbjct: 53  IVTIKSLKGINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQS 112

Query: 61  FFLAPQDKGYYVLNDVFRYIED-----------NDTPQLNSVPVNIINENVEAHIPESED 109
           FFL  ++  Y+VLND FRY+ D            ++   N++     NE+VEA I  +E 
Sbjct: 113 FFLVSRNGSYFVLNDTFRYVSDEFVEPEATKEVEESQSTNAITAEPANESVEAVIVPTE- 171

Query: 110 IHAPKHLVEDPTTSTEDENLNDGNEVHHPQDNEEEGSVIDEEVAVTSADISQNDVVTIRE 169
               K  V  P ++  +          H +  EE+  V++E  ++  A            
Sbjct: 172 ---AKTTVTKPASAIPN---------GHAKVPEEK--VVNENSSLPKA------------ 205

Query: 170 STSTVQDDAPKKFSYASIVKSSAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEALA 229
           + + +Q++ PKK S+A IV+S A        S       A  +++ P   K    PE  A
Sbjct: 206 AEAKLQEEVPKK-SFALIVQSLAQ-------SAGTLQVKASPVKRKP-VEKPVAAPERKA 256

Query: 230 PSSDSVPGSSD-IHEEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRS-SKHG 287
           PS      S++ I  +A+G SI++ NLP +AT+EQL E F  FG I+  G+QVRS  +  
Sbjct: 257 PSPIRKQASAESIKPQAQGSSIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKK 316

Query: 288 FCFGFIEFEDASSMQSALEA---TPIIVGERQAVVEEKR 323
            C GF+ FE+  ++++  +A   +PI +G R+A +EEKR
Sbjct: 317 NCIGFVAFENGEAVKNVFQAHRESPIRIGNRRASIEEKR 355


>AT1G13730.1 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr1:4710519-4712332 FORWARD LENGTH=428
          Length = 428

 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/339 (36%), Positives = 171/339 (50%), Gaps = 51/339 (15%)

Query: 1   MTTVTTTKAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQT 60
           M +V + KAINE I+S +YE    +I TAD+Q SY  GV+ LVTG LT K+    +FSQ+
Sbjct: 53  MVSVKSLKAINEQIMSFDYEISKIQILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQS 112

Query: 61  FFLAPQDKGYYVLNDVFRYIEDNDT-PQLNSVPVNIINENVEAHIPE----SEDIHAPKH 115
           FFL P +  Y+VLNDVFRY+ D    P+ N        + VE  IP+    +E +     
Sbjct: 113 FFLVPLNGSYFVLNDVFRYVADEIVEPEANK-------KEVEEVIPQVVQPTEQVDEVAE 165

Query: 116 LVEDPTTSTEDENLNDGNEVHHPQDNEEEGSVIDEEVAVTSADISQNDVVTIRESTSTVQ 175
            V  PT   E +   + N V  P           E         +Q D V   +S     
Sbjct: 166 PVTIPTQQPEAKQTTE-NTVKKP-----------ERAVANGHPKTQEDNVVNDKSNGV-- 211

Query: 176 DDAPKKFSYASIVKSSAAPGRVYVPSRAARLASAKSIEQSPATSKSTP--GPEALAPSSD 233
            DAPKK S+A IV+  A  G  +         +AK+   SPA  KS P   P A   S  
Sbjct: 212 -DAPKK-SFAHIVQDLAQNGATF---------NAKA---SPAKPKSKPVTKPSAARESKA 257

Query: 234 SVP-----GSSDIHEEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRSSK-HG 287
             P      ++ I ++AEG++I++ NL  +AT EQL E F  FG I   G+QVRS +  G
Sbjct: 258 PAPVSEHSSAATIDQQAEGYTIFVANLLMDATPEQLNETFKGFGAITKDGIQVRSYRLKG 317

Query: 288 FCFGFIEFEDASSMQSALEA---TPIIVGERQAVVEEKR 323
            CFGF+ F  A +++  L+A   + I +G R+  +EEKR
Sbjct: 318 NCFGFVTFASAEAVKLVLQAHKESAIRIGNRRVSIEEKR 356


>AT5G48650.1 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr5:19727279-19729533 FORWARD LENGTH=458
          Length = 458

 Score =  159 bits (402), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/361 (34%), Positives = 193/361 (53%), Gaps = 49/361 (13%)

Query: 1   MTTVTTTKAINENIISLNYEDY-TAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQ 59
           M   +T + I+E +  L Y D  +AEI + D QES+  G ++ VTG  T  +   RKF+Q
Sbjct: 54  MRDFSTFQGISEELKRLTYGDCNSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQ 113

Query: 60  TFFLAPQDKGYYVLNDVFRYIEDNDTPQLNSVPVNIINENVEAHIPESEDIHAPKHLVED 119
           TFFLAPQ+KG++VLND+ R++ D+     ++VP  I  E V         I++    + +
Sbjct: 114 TFFLAPQEKGFFVLNDILRFVNDDAK---DNVPETIDGEVVSG-------INSTTPTIIN 163

Query: 120 PTTSTEDENLNDGN----EVHHPQDNEE-EGSVIDEEVA--VTSADISQNDVVTIRESTS 172
               +E       N    EV  P DNE  + +V+  E+A  V   +I+  +V    +   
Sbjct: 164 GMKGSEQAACVSVNPVCKEVSKPLDNENAKDNVLVPEIANEVARTEITCKEVADDSQKNY 223

Query: 173 TVQD---DAPKKFSYASIVKSSAAPGRVYVPSRAARLASAKSI-----EQSPA------- 217
              D   DAPKK SYAS++K +    +  VP  A  L S K I      Q+P+       
Sbjct: 224 DPDDGLADAPKK-SYASVLKVTKD--KFGVP--AVSLPSPKKIPKDQEHQAPSDPSTGQI 278

Query: 218 ----TSKSTPGPEALAPS---SDSVPGSSDIHEE---AEGHSIYIRNLPFNATVEQLEEV 267
                 +++  P  +  S   S+SV  S + H +   AEG SIY+R+LPFNA ++ LE  
Sbjct: 279 LKDQGQQASSDPSQVIESDTVSESVDASENGHNQEAVAEGTSIYVRHLPFNANIDMLEAE 338

Query: 268 FNKFGPIKHGGVQVRSSKH-GFCFGFIEFEDASSMQSALEATPIIVGERQAVVEEKRTTT 326
           F +FG I +GG+QV + +  G+ +GF+EFE+A +   A+EA+P+ +G  +A VEEK +T+
Sbjct: 339 FKQFGAITNGGIQVINQRGLGYPYGFVEFEEADAAHRAIEASPVKIGGLRAFVEEKLSTS 398

Query: 327 R 327
           R
Sbjct: 399 R 399


>AT2G03640.4 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr2:1104525-1106418 REVERSE LENGTH=453
          Length = 453

 Score =  157 bits (396), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 176/338 (52%), Gaps = 51/338 (15%)

Query: 1   MTTVTTTKAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQT 60
           + T+ + K IN+ I+S++Y+    EI TAD+Q + + GV+ LVTG + G D   RKFSQ+
Sbjct: 53  IVTIKSLKGINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQS 112

Query: 61  FFLAPQDKGYYVLNDVFRYIEDN----------DTPQLNSVPVNIINENVEAHIPESEDI 110
           FFL  ++  Y+VLND FRY+ D           +  Q  +      NE+VEA I  +E  
Sbjct: 113 FFLVSRNGSYFVLNDTFRYVSDEFVEPEATKEVEESQSTNAITEPANESVEAVIVPTE-- 170

Query: 111 HAPKHLVEDPTTSTEDENLNDGNEVHHPQDNEEEGSVIDEEVAVTSADISQNDVVTIRES 170
              K  V  P ++  +          H +  EE+  V++E  ++  A            +
Sbjct: 171 --AKTTVTKPASAIPN---------GHAKVPEEK--VVNENSSLPKA------------A 205

Query: 171 TSTVQDDAPKKFSYASIVKSSAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEALAP 230
            + +Q++ PKK S+A IV+S A        S       A  +++ P   K    PE  AP
Sbjct: 206 EAKLQEEVPKK-SFALIVQSLAQ-------SAGTLQVKASPVKRKP-VEKPVAAPERKAP 256

Query: 231 SSDSVPGSSD-IHEEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRS-SKHGF 288
           S      S++ I  +A+G SI++ NLP +AT+EQL E F  FG I+  G+QVRS  +   
Sbjct: 257 SPIRKQASAESIKPQAQGSSIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKN 316

Query: 289 CFGFIEFEDASSMQSALEA---TPIIVGERQAVVEEKR 323
           C GF+ FE+  ++++  +A   +PI +G R+A +EEKR
Sbjct: 317 CIGFVAFENGEAVKNVFQAHRESPIRIGNRRASIEEKR 354


>AT1G69250.1 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr1:26033163-26035301 FORWARD LENGTH=427
          Length = 427

 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/332 (34%), Positives = 178/332 (53%), Gaps = 32/332 (9%)

Query: 1   MTTVTTTKAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQT 60
           M + T+ +AIN++I+S ++E+   E+ + D+Q S E G+ ++V G +TGKDN  RKFSQ 
Sbjct: 51  MMSFTSVEAINKHILSCDFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQM 110

Query: 61  FFLAPQDKGYYVLNDVFRYIEDNDTPQLNSVPVNIINENVEAHIPESEDIHAPKHLVEDP 120
           F+LA Q+    VLND+ RY++  D+      P   + E V    P      A K  ++  
Sbjct: 111 FYLARQNT-LVVLNDMLRYVDQEDS-STTETPCEPVTEIVR---PADGLKKAEKTELKQK 165

Query: 121 TTSTEDENLNDGNEVH-HPQDNEEEGSVIDEEVAVTSADISQNDVVTIRESTSTVQDDAP 179
             ++ ++++N   E +  P DN   G +   E AV +  +++ D           Q D  
Sbjct: 166 NVASVEKSVNAAVEKNAAPLDN---GKMKQSEKAVITQKVTEPDAAP--------QPDGA 214

Query: 180 KKFSYASIVKS---SAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEALAPSSDSVP 236
           K+ S+A IV S   +AAP +V  P +A  +   K + Q  A +     P+  A  S S+ 
Sbjct: 215 KR-SFADIVGSMAKNAAPFQVKSPVQAP-VQKPKYVGQPRAAA----APQKPAYVSKSIK 268

Query: 237 GSSDIHEEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRSSK---HGFCFGFI 293
            +     E  G SI++ NLP NA   QL E+F  FGPIK  G+QVRSS+   +  CFGFI
Sbjct: 269 KNDQKVIEVPGTSIFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSRGNANPVCFGFI 328

Query: 294 EFEDASSMQSALEA---TPIIVGERQAVVEEK 322
            FE  +S+QS L+A   TP ++ +R+  V+EK
Sbjct: 329 SFETVASVQSVLQAAKNTPFMLADRKLRVKEK 360


>AT2G03640.1 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr2:1104525-1106418 REVERSE LENGTH=422
          Length = 422

 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 176/338 (52%), Gaps = 51/338 (15%)

Query: 1   MTTVTTTKAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQT 60
           + T+ + K IN+ I+S++Y+    EI TAD+Q + + GV+ LVTG + G D   RKFSQ+
Sbjct: 53  IVTIKSLKGINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQS 112

Query: 61  FFLAPQDKGYYVLNDVFRYIEDN----------DTPQLNSVPVNIINENVEAHIPESEDI 110
           FFL  ++  Y+VLND FRY+ D           +  Q  +      NE+VEA I  +E  
Sbjct: 113 FFLVSRNGSYFVLNDTFRYVSDEFVEPEATKEVEESQSTNAITEPANESVEAVIVPTE-- 170

Query: 111 HAPKHLVEDPTTSTEDENLNDGNEVHHPQDNEEEGSVIDEEVAVTSADISQNDVVTIRES 170
              K  V  P ++  +          H +  EE+  V++E  ++  A            +
Sbjct: 171 --AKTTVTKPASAIPN---------GHAKVPEEK--VVNENSSLPKA------------A 205

Query: 171 TSTVQDDAPKKFSYASIVKSSAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEALAP 230
            + +Q++ PKK S+A IV+S A        S       A  +++ P   K    PE  AP
Sbjct: 206 EAKLQEEVPKK-SFALIVQSLAQ-------SAGTLQVKASPVKRKP-VEKPVAAPERKAP 256

Query: 231 SSDSVPGSSD-IHEEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRS-SKHGF 288
           S      S++ I  +A+G SI++ NLP +AT+EQL E F  FG I+  G+QVRS  +   
Sbjct: 257 SPIRKQASAESIKPQAQGSSIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKN 316

Query: 289 CFGFIEFEDASSMQSALEA---TPIIVGERQAVVEEKR 323
           C GF+ FE+  ++++  +A   +PI +G R+A +EEKR
Sbjct: 317 CIGFVAFENGEAVKNVFQAHRESPIRIGNRRASIEEKR 354


>AT1G69250.2 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr1:26033163-26035007 FORWARD LENGTH=389
          Length = 389

 Score =  128 bits (322), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 152/289 (52%), Gaps = 26/289 (8%)

Query: 1   MTTVTTTKAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQT 60
           M + T+ +AIN++I+S ++E+   E+ + D+Q S E G+ ++V G +TGKDN  RKFSQ 
Sbjct: 51  MMSFTSVEAINKHILSCDFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQM 110

Query: 61  FFLAPQDKGYYVLNDVFRYIEDNDTPQLNSVPVNIINENVEAHIPESEDIHAPKHLVEDP 120
           F+LA Q+    VLND+ RY++  D+      P   + E V    P      A K  ++  
Sbjct: 111 FYLARQN-TLVVLNDMLRYVDQEDS-STTETPCEPVTEIVR---PADGLKKAEKTELKQK 165

Query: 121 TTSTEDENLNDGNEVH-HPQDNEEEGSVIDEEVAVTSADISQNDVVTIRESTSTVQDDAP 179
             ++ ++++N   E +  P DN   G +   E AV +  +++ D        +  Q D  
Sbjct: 166 NVASVEKSVNAAVEKNAAPLDN---GKMKQSEKAVITQKVTEPD--------AAPQPDGA 214

Query: 180 KKFSYASIVKS---SAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEALAPSSDSVP 236
           K+ S+A IV S   +AAP +V  P +A  +   K + Q  A +     P+  A  S S+ 
Sbjct: 215 KR-SFADIVGSMAKNAAPFQVKSPVQAP-VQKPKYVGQPRAAA----APQKPAYVSKSIK 268

Query: 237 GSSDIHEEAEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRSSK 285
            +     E  G SI++ NLP NA   QL E+F  FGPIK  G+QVRSS+
Sbjct: 269 KNDQKVIEVPGTSIFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSR 317


>AT5G43960.1 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr5:17689154-17691653 REVERSE LENGTH=450
          Length = 450

 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 178/351 (50%), Gaps = 37/351 (10%)

Query: 3   TVTTTKAINENIISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRK-FSQTF 61
           T  +   I+  ++SLN+     E+KT ++ ES+E GV+V+V+G +  K+   R+ F QTF
Sbjct: 50  TANSLLHIHNMVMSLNFT--AIEVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTF 107

Query: 62  FLAPQDKGYYVLNDVFRYIEDNDTPQLNSVPVNIINENVEAHIPESE-DIHAPKHLVEDP 120
           FLAPQ+KGY+VL+DVF ++++          ++ I    + + P    D     +++E+ 
Sbjct: 108 FLAPQEKGYFVLSDVFLFVDEGTVYYHQPSYLSEIKHEAQLNPPTRHPDPQVSDYVLEEE 167

Query: 121 TTSTED-----ENLNDGNEV----HHPQDNEEEGSVIDEEVAVTSADISQNDVVTIREST 171
            +   +     ++L D   +    H PQ  + E  V  EE       +   DVV    + 
Sbjct: 168 ASDYVNAVQIKDDLVDKYSLQEDQHQPQHEDYEDEVAIEETPREEVAV---DVVHEHRAA 224

Query: 172 STVQDDAPK-KFSYASIVKSSAAPGRVYVPSRAARLASAKSIEQSPATSK--STPGPEAL 228
              +    K K SYASI+K   A     VP  A + +  KS +      +   TP P+  
Sbjct: 225 PVEEPVGEKSKMSYASILK--VAKEAATVPVAATQPSYNKSSQDINEWDQPMRTPSPQLA 282

Query: 229 AP-----SSDSVPGSSDIHEEAEG---------HSIYIRNLPFNATVEQLEEVFNKFGPI 274
           AP      S+S    SD   EAE           S+Y+RNLP + +  ++EE F  FG I
Sbjct: 283 APLAPIQQSNSSTYVSDYGAEAEDGSGFEDFEFKSVYVRNLPSDISASEIEEEFKNFGTI 342

Query: 275 KHGGVQVRSSK--HGFCFGFIEFEDASSMQSALEATPIIVGERQAVVEEKR 323
           K  GV +R+ K   G C+ F+EFED +S+++A++A+PI +G RQ  +EE+R
Sbjct: 343 KPDGVFLRTRKDVMGVCYAFVEFEDMTSVENAIKASPIYLGGRQVYIEERR 393


>AT5G43960.2 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein with RNA binding (RRM-RBD-RNP motifs) domain |
           chr5:17689154-17691220 REVERSE LENGTH=391
          Length = 391

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 174/340 (51%), Gaps = 37/340 (10%)

Query: 14  IISLNYEDYTAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRK-FSQTFFLAPQDKGYYV 72
           ++SLN+     E+KT ++ ES+E GV+V+V+G +  K+   R+ F QTFFLAPQ+KGY+V
Sbjct: 2   VMSLNFT--AIEVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKGYFV 59

Query: 73  LNDVFRYIEDNDTPQLNSVPVNIINENVEAHIP-ESEDIHAPKHLVEDPTTSTED----- 126
           L+DVF ++++          ++ I    + + P    D     +++E+  +   +     
Sbjct: 60  LSDVFLFVDEGTVYYHQPSYLSEIKHEAQLNPPTRHPDPQVSDYVLEEEASDYVNAVQIK 119

Query: 127 ENLNDGNEV----HHPQDNEEEGSVIDEEVAVTSADISQNDVVTIRESTSTVQDDAPK-K 181
           ++L D   +    H PQ  + E  V  EE       +   DVV    +    +    K K
Sbjct: 120 DDLVDKYSLQEDQHQPQHEDYEDEVAIEETPREEVAV---DVVHEHRAAPVEEPVGEKSK 176

Query: 182 FSYASIVKSSAAPGRVYVPSRAARLASAKSIEQSPATSK--STPGPEALAP-----SSDS 234
            SYASI+K   A     VP  A + +  KS +      +   TP P+  AP      S+S
Sbjct: 177 MSYASILK--VAKEAATVPVAATQPSYNKSSQDINEWDQPMRTPSPQLAAPLAPIQQSNS 234

Query: 235 VPGSSDIHEEAEG---------HSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRSSK 285
               SD   EAE           S+Y+RNLP + +  ++EE F  FG IK  GV +R+ K
Sbjct: 235 STYVSDYGAEAEDGSGFEDFEFKSVYVRNLPSDISASEIEEEFKNFGTIKPDGVFLRTRK 294

Query: 286 --HGFCFGFIEFEDASSMQSALEATPIIVGERQAVVEEKR 323
              G C+ F+EFED +S+++A++A+PI +G RQ  +EE+R
Sbjct: 295 DVMGVCYAFVEFEDMTSVENAIKASPIYLGGRQVYIEERR 334


>AT3G07250.1 | Symbols:  | nuclear transport factor 2 (NTF2) family
           protein / RNA recognition motif (RRM)-containing protein
           | chr3:2300579-2308305 REVERSE LENGTH=1294
          Length = 1294

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 40/315 (12%)

Query: 23  TAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQTFFLAPQDKGYYVLNDVFRYIED 82
           + +I +  +Q+S ++G++V+V G LT  +   R F+Q FFL PQ+KGY V  D+FR++  
Sbjct: 338 SVKITSVTSQDSLKQGILVVVYGYLTFNERPARHFTQVFFLVPQEKGYIVCTDMFRFV-- 395

Query: 83  NDTPQLNSVPVNIINENVEAHIPESEDIHAPKHLVEDPTTSTEDENLNDGNEVHHPQDNE 142
            D P+ N            A IP + D+      +E+    TE   L   +E +H  DN 
Sbjct: 396 -DIPEAN------------AAIPPANDV------IEEKVPETEGAALRV-SEPNHGFDNV 435

Query: 143 EEGSVIDEEVAVTSADISQNDVVT-----------IRESTSTVQDD--APKKFSYASIVK 189
            + S   E  A+ +  +  +  +            IR     V+ +     K++Y    +
Sbjct: 436 PKLSCASEGAAICAKKLPLDATIAFVENAFKQFGEIRRGGVEVRINWHCTGKYAYVEFEE 495

Query: 190 SSAAPGRVYVPSRAARLASAKSIEQSPATSKSTPGPEALAPSSDSVPGSSDIHEEAEGHS 249
           + AA  R  + S  +       +E+  A +K+          + +   S  I E+A    
Sbjct: 496 AEAA-NRAIMASPISIDGYRTYVEKKYAYNKNIKADAGADTGNGNSQDSQAITEDAH--- 551

Query: 250 IYIRNLPFNATVEQLEEVFNKFGPIKHGGVQV-RSSKHGFCFGFIEFEDASSMQSALEAT 308
           I +++LP NATV  +E VF +FGPIK G ++V   +   + + F+EFE+A + + A++A+
Sbjct: 552 IRVKDLPPNATVALVESVFKQFGPIKKGRIRVINPANSNYWYAFVEFEEADAAKRAIQAS 611

Query: 309 PIIVGERQAVVEEKR 323
           P+ V      VE+K+
Sbjct: 612 PLNVDGHTTYVEQKQ 626



 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 135/310 (43%), Gaps = 56/310 (18%)

Query: 23   TAEIKTADAQESYEKGVIVLVTGCLTGKDNVGRKFSQTFFLAPQDKGYYVLNDVFRYI-- 80
            + E+ +  +Q+S++KG+ V V G  T  +   R F+Q F  APQ+KG +V  D+F+++  
Sbjct: 1004 SVEVTSVMSQDSHDKGIRVAVDGYFTFNERPARNFTQNFTFAPQEKGLFVSTDMFKFVGI 1063

Query: 81   -EDNDT-PQLNSVPVNIINENVEAHIPESEDIHAPKHLVEDPTTSTEDENLNDGNEVHHP 138
             E N T P  N+  + + N  + A I           LVE+       E    G EV + 
Sbjct: 1064 PEANATIPPANNAAICVKNLPLNATIA----------LVENAFKQF-GEIRRGGVEVRNK 1112

Query: 139  QDNEEEGSVIDEEVAVTSADISQNDVVTIRESTSTVQDDAPKKFSYASIVKSSAAPGRVY 198
            +          EE A   A   +   VTI   +  V+   P    Y      S  PG +Y
Sbjct: 1113 RSFSYGFVEFKEENAAQRA--IKASPVTIDLRSVYVEKKRPDYIRYWDT--PSTGPGIIY 1168

Query: 199  VPSRAARLASAKSIEQSPATSKSTPGPEALAPSSDSVPGSSDIHEEAEGHSIYIRNLPFN 258
               R+  ++  K    +   +++   P AL  +                  ++++NLP N
Sbjct: 1169 ---RSEGMSVTKDY-GNKGGNENNQEPRALYAA------------------VHVKNLPPN 1206

Query: 259  ATVEQLEEVFNKFGPIKHGGVQVRSSKHGFCFGFIEFEDASSMQSA-------------- 304
             T + +E  F +FGPIK GGVQV +   G  FG ++F  A++ + A              
Sbjct: 1207 VTTDWVENAFKQFGPIKRGGVQVSNRGVGNWFGNVKFVHAAAAERAVNPQVLLIMLPGMN 1266

Query: 305  -LEATPIIVG 313
             ++A+P+++G
Sbjct: 1267 LIQASPLLIG 1276



 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 1/79 (1%)

Query: 245  AEGHSIYIRNLPFNATVEQLEEVFNKFGPIKHGGVQVRSSKHGFCFGFIEFEDASSMQSA 304
            A   +I ++NLP NAT+  +E  F +FG I+ GGV+VR +K  F +GF+EF++ ++ Q A
Sbjct: 1073 ANNAAICVKNLPLNATIALVENAFKQFGEIRRGGVEVR-NKRSFSYGFVEFKEENAAQRA 1131

Query: 305  LEATPIIVGERQAVVEEKR 323
            ++A+P+ +  R   VE+KR
Sbjct: 1132 IKASPVTIDLRSVYVEKKR 1150


>AT3G55540.1 | Symbols:  | nuclear transport factor 2 (NTF2) family
           protein | chr3:20598218-20599614 FORWARD LENGTH=334
          Length = 334

 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 10/132 (7%)

Query: 1   MTTVTTTKAINENIISLNYEDYTAEIKTADAQE---SYEKGVIVLVTGCLTGKDN-VGRK 56
           M + T+ +AI E I+S +YE  + ++ +  AQ    S E G  ++VTG LT KD  V R+
Sbjct: 71  MMSFTSPEAIQEQIVSCDYEGASFDVMSFAAQSCNTSSEDGAFIMVTGFLTCKDKQVRRR 130

Query: 57  FSQTFFLA-PQDKGYYVLNDVFRYIEDNDTPQLNSVPVNIINENVEAHIPESEDI---HA 112
           F Q+ +LA  QD+ Y ++ND  RYI+    P L SVP +     V   +P  E++   + 
Sbjct: 131 FVQSLYLARRQDRSYAIVNDFLRYID--SIPALPSVPESAGFVKVYYELPMREELGLMYV 188

Query: 113 PKHLVEDPTTST 124
            + ++  PT+++
Sbjct: 189 NESIMSRPTSTS 200