Miyakogusa Predicted Gene
- Lj4g3v1720810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1720810.1 Non Chatacterized Hit- tr|I1JZI1|I1JZI1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25632 PE,78.68,0,Nucleic
acid-binding proteins,Nucleic acid-binding, OB-fold-like; seg,NULL;
rpa1: replication factor,CUFF.49630.1
(621 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08020.1 | Symbols: ATRPA70B, RPA70B | RPA70-kDa subunit B | ... 873 0.0
AT5G61000.1 | Symbols: RPA70D, ATRPA70D | Replication factor-A p... 833 0.0
AT2G06510.1 | Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A | replic... 295 5e-80
AT2G06510.2 | Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A | replic... 290 3e-78
AT5G45400.1 | Symbols: RPA70C, ATRPA70C | Replication factor-A p... 278 7e-75
AT4G19130.1 | Symbols: | Replication factor-A protein 1-related... 273 3e-73
AT1G52950.1 | Symbols: | Nucleic acid-binding, OB-fold-like pro... 78 2e-14
>AT5G08020.1 | Symbols: ATRPA70B, RPA70B | RPA70-kDa subunit B |
chr5:2572107-2574879 FORWARD LENGTH=604
Length = 604
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/622 (65%), Positives = 506/622 (81%), Gaps = 19/622 (3%)
Query: 1 MAKSITPNAVSTLIXXXXXXXXXXLPELIVQVLDLKQSGMNRYMFAANDGKLKLKAILPS 60
M S+T + ++T++ PE++VQV+DLK +G NRY F+ANDGK+K+KA+LP+
Sbjct: 1 MENSVTQDGIATVLANQSLDSSSVRPEIVVQVVDLKPAG-NRYTFSANDGKMKIKAMLPA 59
Query: 61 SMYSEVLSGNIQNLGLIRILDYTVNDIPNKPE-KYLIVTKCEAVSPALEMEIKTEQTAAG 119
++ S+++SG IQNLGLIR+L+YTVNDIP K E KY+++TKCEAV+ AL+ EIK E
Sbjct: 60 TLTSDIISGKIQNLGLIRLLEYTVNDIPGKSEEKYMLITKCEAVASALDSEIKAE----- 114
Query: 120 IVLKPREDGGVKSEAAAGIVLKPKQEMVTKSAAQIVHEQHGNVAPAARMAMTRRVRPLVS 179
+A+ GI+LKPK E V KSA+QI++EQ GN APAARMAMTRRV PLVS
Sbjct: 115 ------------IKASTGIMLKPKHEFVAKSASQIINEQRGNAAPAARMAMTRRVHPLVS 162
Query: 180 LNPYQANWTIKVSVTSKGNMRTYKNARGEGCVFNVELTDEEGTQIQATMFNDAARKFYDK 239
LNPYQ +WTIKV VT+KG MRTYKNARGEGCVFNVELTDEEGTQIQATMFN AARKFYD+
Sbjct: 163 LNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQIQATMFNAAARKFYDR 222
Query: 240 FVLGKVYYISKGTLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVQIDQ 299
F +GKVYYIS+G+LK+ANKQFKTVQNDYEMTL F PETKFNFV ID+
Sbjct: 223 FEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVPIDE 282
Query: 300 LGPFVNKNELVDVVGVVQNVSASTSIRRKINNETIPKRDITIADETKKTVVVSLWNDLAT 359
LG +VN+ +L+DV+GVVQ+VS + SIRRK +NE IPKRDIT+ADETKKTVVVSLWNDLAT
Sbjct: 283 LGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLAT 342
Query: 360 NIGQELLDMADKSPVVAIKALRVGDFQGVSLSTISKSLVLINPDIPEAKRLKCWYDAEGK 419
IGQELLDMAD PV+AIK+L+VG FQGVSLSTIS+S V+INP+ PEA +LK WYDAEGK
Sbjct: 343 GIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEATKLKSWYDAEGK 402
Query: 420 DAPLASVGSGSSATSPNGARSVYADRVPLSHITTNTSLGQDKPVFFSVRGHIRFIKPDQT 479
+ ++++GSG S+++ NG+RS+Y+DRV LSHIT+N SLG++KPVFFS R +I FIKPDQT
Sbjct: 403 ETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSTRAYISFIKPDQT 462
Query: 480 MTYRACKNSNKKVTESFGAGYWCEACQKNDEQCSLRYIMVVKVSDASGEAYISVFNDEAE 539
M YRACK NKKVTE+ +GYWCE+CQK D++CSLRYIM VKVSD++GE ++S FNDEAE
Sbjct: 463 MWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSAFNDEAE 522
Query: 540 KIVGCSADELDNLKQQEGEDNPYQLKLKQATWVPHLFRVSVSQNEYNNEKRQRITARAVV 599
KI+GC+AD+L++LK +EGE N +Q KLK+ATW HLFR+SVSQ EYN+EKRQRIT R V
Sbjct: 523 KIIGCTADDLNDLKSEEGEVNEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVRGVS 582
Query: 600 PVDFAAESRLLLEEISKMKAAQ 621
P+DFAAE+RLLL++ISK K +Q
Sbjct: 583 PIDFAAETRLLLQDISKNKTSQ 604
>AT5G61000.1 | Symbols: RPA70D, ATRPA70D | Replication factor-A
protein 1-related | chr5:24549682-24552641 REVERSE
LENGTH=629
Length = 629
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/632 (64%), Positives = 499/632 (78%), Gaps = 14/632 (2%)
Query: 1 MAKSITPNAVSTLIXXXXXXXXXXLPELIVQVLDLKQSGMNRYMFAANDGKLKLKAILPS 60
M S+TP+A+ST++ E++VQV+DLK G NRY F+ANDGK K+KA+ +
Sbjct: 1 MQTSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIG-NRYTFSANDGKTKVKAMFTA 59
Query: 61 SMYSEVLSGNIQNLGLIRILDYTVNDIPNKPEKYLIVTKCEAVSPALEMEIKTEQTAAGI 120
S+ E++SG IQNLGLIR++D+TVNDI +K KY +VTKCEAV L+ EI + +
Sbjct: 60 SLTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFLVTKCEAVGSVLDSEINLDSKSGE- 118
Query: 121 VLKPREDGGVKSE----------AAAGIVLKPKQEMVTKSAAQIVHEQHGNVAPAARMAM 170
+ RE K E + GI LKPKQE V KSA+QI+ EQ GN APAARMAM
Sbjct: 119 -EEAREPKKQKLEHSPVSPLNDVVSTGITLKPKQEFVAKSASQIMSEQRGNAAPAARMAM 177
Query: 171 TRRVRPLVSLNPYQANWTIKVSVTSKGNMRTYKNARGEGCVFNVELTDEEGTQIQATMFN 230
TRRV PLVSLNPYQ NWTIKV VT+KG MR YKNARGEGCVFNVELTDEEGTQIQATMFN
Sbjct: 178 TRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFN 237
Query: 231 DAARKFYDKFVLGKVYYISKGTLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPET 290
DAARKF+D+F LGKVYYIS+G+LK+ANKQFKTVQNDYEMTL F+PET
Sbjct: 238 DAARKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPET 297
Query: 291 KFNFVQIDQLGPFVNKNELVDVVGVVQNVSASTSIRRKINNETIPKRDITIADETKKTVV 350
KFNFV I++LG +VN+ EL+D++GVVQ+VS + SIRR+ +NE IPKRDIT+ADE++KTVV
Sbjct: 298 KFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVV 357
Query: 351 VSLWNDLATNIGQELLDMADKSPVVAIKALRVGDFQGVSLSTISKSLVLINPDIPEAKRL 410
VSLWNDLAT IGQELLDMAD+SPV+AIK+L+VGDFQGVSLSTIS+S V+INP+ PEAK+L
Sbjct: 358 VSLWNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKL 417
Query: 411 KCWYDAEGKDAPLASVGSGSSATSPNGARSVYADRVPLSHITTNTSLGQDKPVFFSVRGH 470
K W+D+EGK+ ++S+GSG S ++ NG+RS+Y DRV LSHIT+N SL ++KPVFFS R +
Sbjct: 418 KSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAY 477
Query: 471 IRFIKPDQTMTYRACKNSNKKVTESFGAGYWCEACQKNDEQCSLRYIMVVKVSDASGEAY 530
I FIKPDQTM Y+ACK NKKVTE+ +GYWCE CQ+ E+CSLRYIM VKV+D+SGE +
Sbjct: 478 ISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETW 537
Query: 531 ISVFNDEAEKIVGCSADELDNLKQQEGEDNPYQLKLKQATWVPHLFRVSVSQNEYNNEKR 590
IS FNDEAEKI+GCSADEL+ LK +EGE N YQ KLK+ATW H+FRVSV+QNEYN EKR
Sbjct: 538 ISSFNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKR 597
Query: 591 QRITARAVVPVDFAAESRLLLEEIS-KMKAAQ 621
QR+T + V P+DFAAE+RLLL++IS K K +Q
Sbjct: 598 QRVTVKGVAPLDFAAETRLLLQDISNKNKTSQ 629
>AT2G06510.1 | Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A |
replication protein A 1A | chr2:2585215-2587601 FORWARD
LENGTH=640
Length = 640
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 202/652 (30%), Positives = 332/652 (50%), Gaps = 56/652 (8%)
Query: 1 MAKSITPNAVSTLIXXXXXXXXXXLPELIVQVLDLKQSGMN------RYMFAANDGKLKL 54
M S+TPNA++ + + ++QVL++K G + RY F +DG
Sbjct: 1 MPVSLTPNAITAIHDGDVNL------KPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQ 54
Query: 55 KAILPSSMYSEVLSGNIQNLGLIRILDYTVNDIPNKPEKYLIVTKCEAV--------SPA 106
A++ + V SG + +++++DY +D+ K K ++V E + +P
Sbjct: 55 HAMVAVQLNDRVKSGQFEKGSIVQLIDYICSDV--KGRKLIVVLNMETIVQQSETIGNPT 112
Query: 107 LEMEIKTE--QTAAG----------IVLKPREDGGVKSEAAAGIVLKPKQEMVTKSAAQI 154
+ E TE +T +G + +P V G+ ++ Q T S
Sbjct: 113 IFGETDTEAQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRGVNIQ-NQANNTPSFRPS 171
Query: 155 VHEQHG------NVAPAARMAMTRRVRPLVSLNPYQANWTIKVSVTSKGNMRTYKNARGE 208
V + N P + RV P+ +LNPYQ W IK VT+KG++R Y NA+G+
Sbjct: 172 VQPSYQPPASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGD 231
Query: 209 GCVFNVELTDEEGTQIQATMFNDAARKFYDKFVLGKVYYISKGTLKVANKQFKTVQNDYE 268
G VF+ +L D +G +I+ T FN +FYD +GKVY ISKG+LK A K F ++N++E
Sbjct: 232 GKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWE 291
Query: 269 MTLXXXXXXXXXXXXXXFVPETKFNFVQIDQLGPFVNKNELVDVVGVVQNVSASTSIRRK 328
+ L +P+ +F+F I + N N ++DV+GVV +V+ S I RK
Sbjct: 292 IFLESTSTVELCPDEDGSIPKQQFSFRPISDIENAEN-NTILDVIGVVTSVNPSVPILRK 350
Query: 329 INNETIPKRDITIADETKKTVVVSLWNDLATNIGQELLDMADKS--PVVAIKALRVGDFQ 386
ET +R + + DE+ K V V+LW + G++L +M D + PV+AIKA +V DF
Sbjct: 351 NGMET-HRRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFS 409
Query: 387 GVSLSTISKSLVLINPDIPEAKRLKCWYDAEGKDAPLASVGSGSSATSPNGARSVYADRV 446
G S+ TIS + + INPD PEA +L+ W+D GKD S+ S T P G S R
Sbjct: 410 GKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSI---SRDTMPGGV-SRNEIRK 465
Query: 447 PLSHITTNTSLGQDKPVFFSVRGHIRFIKPDQTMTYRAC------KNSNKKVTESFGAGY 500
+S I DKP + +V+ I FIK D + Y AC K NKKVT S +
Sbjct: 466 NVSQIKEEGLGRSDKPDWITVKATISFIKTD-SFCYTACPLMIGDKQCNKKVTRSGTNRW 524
Query: 501 WCEACQKNDEQCSLRYIMVVKVSDASGEAYISVFNDEAEKIVGCSADELDNLKQQEGEDN 560
C+ C + ++C RY++ V++ D +G +I+ F + E+I+GC A +L +K + ++
Sbjct: 525 LCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEE 584
Query: 561 PYQLKLKQATWVPHLFRVSVSQNEYNNEKRQRITARAVVPVDFAAESRLLLE 612
+ ++ + ++ ++ + + Y +E+R ++T V V++ +ES+ +L+
Sbjct: 585 EFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLD 636
>AT2G06510.2 | Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A |
replication protein A 1A | chr2:2585215-2587601 FORWARD
LENGTH=617
Length = 617
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 195/631 (30%), Positives = 322/631 (51%), Gaps = 61/631 (9%)
Query: 25 LPELIVQVLDLKQS-GMNRYMFAANDGKLKLKAILPSSMYSEVLSGNIQNLGLIRILDYT 83
+P L ++++ Q RY F +DG A++ + V SG + +++++DY
Sbjct: 1 MPVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDYI 60
Query: 84 VNDIPNKPEKYLIVTKCEAV--------SPALEMEIKTE--QTAAG-------------- 119
+D+ K K ++V E + +P + E TE +T +G
Sbjct: 61 CSDV--KGRKLIVVLNMETIVQQSETIGNPTIFGETDTEAQKTFSGTGNIPPPNRVVFNE 118
Query: 120 ------IVLKPREDGGVKSEAAAGIVLKPKQEMVTKSAAQIVHEQHG----NVAPAARMA 169
+ P ++++A +P + + A + HG N APA
Sbjct: 119 PMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPAS--YRNHGPIMKNEAPA---- 172
Query: 170 MTRRVRPLVSLNPYQANWTIKVSVTSKGNMRTYKNARGEGCVFNVELTDEEGTQIQATMF 229
RV P+ +LNPYQ W IK VT+KG++R Y NA+G+G VF+ +L D +G +I+ T F
Sbjct: 173 ---RVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCF 229
Query: 230 NDAARKFYDKFVLGKVYYISKGTLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPE 289
N +FYD +GKVY ISKG+LK A K F ++N++E+ L +P+
Sbjct: 230 NALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPK 289
Query: 290 TKFNFVQIDQLGPFVNKNELVDVVGVVQNVSASTSIRRKINNETIPKRDITIADETKKTV 349
+F+F I + N N ++DV+GVV +V+ S I RK ET +R + + DE+ K V
Sbjct: 290 QQFSFRPISDIENAEN-NTILDVIGVVTSVNPSVPILRKNGMET-HRRILNLKDESGKAV 347
Query: 350 VVSLWNDLATNIGQELLDMADKS--PVVAIKALRVGDFQGVSLSTISKSLVLINPDIPEA 407
V+LW + G++L +M D + PV+AIKA +V DF G S+ TIS + + INPD PEA
Sbjct: 348 EVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEA 407
Query: 408 KRLKCWYDAEGKDAPLASVGSGSSATSPNGARSVYADRVPLSHITTNTSLGQDKPVFFSV 467
+L+ W+D GKD S+ S T P G S R +S I DKP + +V
Sbjct: 408 HKLRTWFDYGGKDTASFSI---SRDTMPGGV-SRNEIRKNVSQIKEEGLGRSDKPDWITV 463
Query: 468 RGHIRFIKPDQTMTYRAC------KNSNKKVTESFGAGYWCEACQKNDEQCSLRYIMVVK 521
+ I FIK D + Y AC K NKKVT S + C+ C + ++C RY++ V+
Sbjct: 464 KATISFIKTD-SFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQ 522
Query: 522 VSDASGEAYISVFNDEAEKIVGCSADELDNLKQQEGEDNPYQLKLKQATWVPHLFRVSVS 581
+ D +G +I+ F + E+I+GC A +L +K + ++ + ++ + ++ ++ +
Sbjct: 523 IQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIK 582
Query: 582 QNEYNNEKRQRITARAVVPVDFAAESRLLLE 612
+ Y +E+R ++T V V++ +ES+ +L+
Sbjct: 583 EESYGDEQRVKMTVVKVDKVNYTSESKYMLD 613
>AT5G45400.1 | Symbols: RPA70C, ATRPA70C | Replication factor-A
protein 1-related | chr5:18398990-18401644 FORWARD
LENGTH=853
Length = 853
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 256/468 (54%), Gaps = 22/468 (4%)
Query: 161 NVAPAARMAMTRRVRPLVSLNPYQANWTIKVSVTSKGNMRTYKNARGEGCVFNVELTDEE 220
N P AR R+ P+ +LNPYQ WTIKV VTSK ++R + N RGEG +F+ +L D +
Sbjct: 286 NRGPVARNEAPPRINPIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDAD 345
Query: 221 GTQIQATMFNDAARKFYDKFVLGKVYYISKGTLKVANKQFKTVQNDYEMTLXXXXXXXXX 280
G +I+ T FNDA +F+DK V+G VY IS+G LK A K F + NDYE+ L
Sbjct: 346 GGEIRVTCFNDAVDQFFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPC 405
Query: 281 XXXXXFVPETKFNFVQIDQLGPFVNKNELVDVVGVVQNVSASTSIRRKINNETIPKRDIT 340
+P F+F I + N N DV+G+V ++S + +I RK N + KR +
Sbjct: 406 EDDGT-IPRYHFHFRNIGDIENMEN-NSTTDVIGIVSSISPTVAIMRK-NLTEVQKRSLQ 462
Query: 341 IADETKKTVVVSLWNDLATNIGQELLDMADKS--PVVAIKALRVGDFQGVSLSTISKSLV 398
+ D + ++V V++W + GQ+L ++ D PV+A+KA R+G+F G +STI S
Sbjct: 463 LKDMSGRSVEVTMWGNFCNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQF 522
Query: 399 LINPDIPEAKRLKCWYDAEGKDAPLASVGSGSSATSPNGARSVYADRVPLSHITTNTSLG 458
I PD PEA+ L+ WY+ EG++A S+ S R V A + LG
Sbjct: 523 FIEPDFPEARELRQWYEREGRNAHFTSISREFSGVGRQEVRKVIAQ-------IKDEKLG 575
Query: 459 -QDKPVFFSVRGHIRFIKPDQTMTYRAC------KNSNKKVTESFGAGYW-CEACQKNDE 510
+KP + +V I F+K + Y AC + +KKVT + G G W CE C K +
Sbjct: 576 TSEKPDWITVCATISFMKV-ENFCYTACPIMNGDRPCSKKVTNN-GDGTWRCEKCDKCVD 633
Query: 511 QCSLRYIMVVKVSDASGEAYISVFNDEAEKIVGCSADELDNLKQQEGEDNPYQLKLKQAT 570
+C RYI+ +++ D + + + F + E+I+G SA +L +K + ++ ++ ++
Sbjct: 634 ECDYRYILQIQLQDHTDLTWATAFQEAGEEIMGMSAKDLYYVKYENQDEEKFEDIIRSVA 693
Query: 571 WVPHLFRVSVSQNEYNNEKRQRITARAVVPVDFAAESRLLLEEISKMK 618
+ ++F++ + + Y++E+R + T +++++ +R +LE I K+K
Sbjct: 694 FTKYIFKLKIKEETYSDEQRVKATVVKAEKLNYSSNTRFMLEAIDKLK 741
>AT4G19130.1 | Symbols: | Replication factor-A protein 1-related |
chr4:10466618-10469092 REVERSE LENGTH=784
Length = 784
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 262/469 (55%), Gaps = 19/469 (4%)
Query: 159 HGNVAPAARMAMTRRVRPLVSLNPYQANWTIKVSVTSKGNMRTYKNARGEGCVFNVELTD 218
+ N P AR ++ P+ +L+PY WTIK VT+K ++ Y N RGEG VFN +L D
Sbjct: 213 YANRGPVARNEAPPKIIPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLD 272
Query: 219 EEGTQIQATMFNDAARKFYDKFVLGKVYYISKGTLKVANKQFKTVQNDYEMTLXXXXXXX 278
+G +I+ T FN A +FYD+ V+G +Y IS+G+L+ A K F ++NDYE+ L
Sbjct: 273 ADGGEIRVTCFNAVADQFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIK 332
Query: 279 XXXXXXXFVPETKFNFVQIDQLGPFVNKNELVDVVGVVQNVSASTSIRRKINNETIPKRD 338
+P +F+F I + N N +VDV+G+V ++S + +I RK N PKR
Sbjct: 333 QCYEEDAAIPRHQFHFRTIGDIESMEN-NCIVDVIGIVSSISPTVTITRK-NGTATPKRS 390
Query: 339 ITIADETKKTVVVSLWNDLATNIGQELLDMADKS--PVVAIKALRVGDFQGVSLSTISKS 396
+ + D + ++V V++W D GQ L + D PV+A+KA R+ +F G ++STI S
Sbjct: 391 LQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGSS 450
Query: 397 LVLINPDIPEAKRLKCWYDAEGKDAPLASVGSGSSATSPNGARSVYADRVPLSHITTNTS 456
+ I+PD EA++LK W++ EGK P S+ S S +G V R +S I
Sbjct: 451 QLFIDPDFVEAEKLKNWFEREGKSVPCISL---SREFSGSGKVDV---RKTISQIKDEKL 504
Query: 457 LGQDKPVFFSVRGHIRFIKPDQTMTYRAC------KNSNKKVTESFGAGYW-CEACQKND 509
+KP + +V I ++K D Y AC + +KKVT++ G G W CE C K+
Sbjct: 505 GTSEKPDWITVSATILYLKFDN-FCYTACPIMNGDRPCSKKVTDN-GDGTWRCEKCDKSV 562
Query: 510 EQCSLRYIMVVKVSDASGEAYISVFNDEAEKIVGCSADELDNLKQQEGEDNPYQLKLKQA 569
++C RYI+ +++ D + ++ F + E+I+G SA +L +K + ++ ++ +++
Sbjct: 563 DECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKV 622
Query: 570 TWVPHLFRVSVSQNEYNNEKRQRITARAVVPVDFAAESRLLLEEISKMK 618
+ + F++ V + +++E+R + T V ++++A++R +L + K++
Sbjct: 623 AFTKYNFKLKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDKLR 671
>AT1G52950.1 | Symbols: | Nucleic acid-binding, OB-fold-like
protein | chr1:19725483-19728007 FORWARD LENGTH=566
Length = 566
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 170/416 (40%), Gaps = 24/416 (5%)
Query: 179 SLNPYQANWTIKVSVTSKGNMRTYKNARGEGCVFNVELTDEEGTQIQATMFNDAARKFYD 238
+L P++ +W I+V + N T +G G + + L DE+G +IQA + + K
Sbjct: 12 NLKPFKTSWCIQVKILHAWNHYT----KGSGMSYEMMLADEDGNKIQAGIKKEHLLKLQR 67
Query: 239 KFVLGKVYYISKGTLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVQID 298
+G I + ++ A+ +++ + Y + + + NF D
Sbjct: 68 YVKIGHWTIIEEFSVTKASGLYRSTTHPYRINIQSSTRFSNSPTISDEIWLDLVNFN--D 125
Query: 299 QLGPFVNKNELVDVVGVVQNVSASTSIRRKINNETIPKRDITIADETKKTVVVSLWNDLA 358
L +++N+LV+V+G + NV + + + K D + D + SLW A
Sbjct: 126 VLSGTLDQNKLVNVIGQLVNVGEIQLL--DVQGKPTKKIDFQLRDTDDNRLPCSLWGKFA 183
Query: 359 TNIGQELLDMADKSPVVAIKALRVGDFQGV-SLST-ISKSLVLINPDIPEAKRLKCWYDA 416
I + + + I+ ++G ++ + S+S S V INP + E + K +
Sbjct: 184 DQIHKVSKESVGGIVICLIRWAKLGHYKEIRSISNAFDASEVFINPILTEVEEFKNLLPS 243
Query: 417 EGKDAPLASVGSGSSATSPNGARSVYADRVPLSHITTNTSLGQDKPVFFSVRGHIRFIKP 476
+G + RS +R ++ + + + + K + I I
Sbjct: 244 DGLALTIMEPKPRFQPLRVREERSKQFERKTIAELKASFEVEKVKII-----CSILSIDL 298
Query: 477 DQTMTYRACKNSNKKV-----TESFGAG---YWCEACQKNDEQCSLRYIMVVKVSDASGE 528
D + Y A NKKV T S GA Y C+ C + RY + + + D +GE
Sbjct: 299 DYSWYYYAHIKCNKKVFKSKKTLSSGAKKIIYRCDKCATDVTSIEARYWLHLDIMDNTGE 358
Query: 529 AYISVFNDEAEKIVGCSADE-LDNLKQQEGEDNPYQLKLKQATWVPHLFRVSVSQN 583
+ + +F+ E I+GC A E LD +Q E P +K + F V V Q+
Sbjct: 359 SKLMLFDSFVEPIIGCPATELLDVTNEQIDEPQPLPDVVKNIIGKTYQFLVCVEQD 414