Miyakogusa Predicted Gene

Lj4g3v1719780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1719780.1 tr|Q010E4|Q010E4_OSTTA A84702 probable presenilin
(ISS) (Fragment) OS=Ostreococcus tauri
GN=Ot10g013,47.86,1e-17,PRESENILIN,Peptidase A22A, presenilin;
PRESENILIN HOMOLOG,NULL; Presenilin, signal peptide
peptidase,CUFF.49627.1
         (464 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G29900.1 | Symbols: PS2 | Presenilin-2 | chr2:12749837-127510...   443   e-124
AT1G08700.1 | Symbols: PS1 | Presenilin-1 | chr1:2769885-2771348...   353   1e-97

>AT2G29900.1 | Symbols: PS2 | Presenilin-2 | chr2:12749837-12751030
           FORWARD LENGTH=397
          Length = 397

 Score =  443 bits (1140), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/447 (57%), Positives = 309/447 (69%), Gaps = 61/447 (13%)

Query: 20  ILDHLGEELVRIIAPVSICMFLVVILVSILNTGSSFERPTSIATIA--YDESTIDSSWDK 77
           ILD LGEEL+ I+ PVSICMF VV+LV ILN+  S    +  +     Y ES  DSSWDK
Sbjct: 10  ILDSLGEELIAILTPVSICMFTVVLLVCILNSDPSSSSASFSSIATAAYSESDSDSSWDK 69

Query: 78  FLGALLNSLAFVAMVTFATFILVLLFYFRCTRFLKLYMAFSSFVVLAFLGGAVSLFLIQH 137
           F+GALLNS+ FVA +T ATF+LVLLFY RC +FLK YM FS+F+VL  LGG + + LI  
Sbjct: 70  FVGALLNSVVFVAAITVATFVLVLLFYLRCVKFLKFYMGFSAFIVLGNLGGEILVLLIDR 129

Query: 138 FGTPIDCVTFFLVLCNFAVVGVMAVFMSKFAIVVTQGYLVVIGILVAYWCTMLPEWTTWA 197
           F  PID +TF ++L NF+VVGV AVFMSKF+I++TQGYLV IG+LVAY+ T+LPEWTTW 
Sbjct: 130 FRFPIDSITFLILLFNFSVVGVFAVFMSKFSILITQGYLVWIGVLVAYFFTLLPEWTTWV 189

Query: 198 MLVAMALYDLAAVLLPVGPLRILVELAITRDEEIPALVYEARPVNHDNVDPREVVAQRRM 257
           +LVA+ALYD+AAVLLPVGPLR+LVE+AI+RDE+IPALVYEARPV  +  D R V  QRR+
Sbjct: 190 LLVALALYDIAAVLLPVGPLRLLVEMAISRDEDIPALVYEARPVIRN--DSRSV--QRRV 245

Query: 258 WRDRRIQNSDGRGLSAEQSHFNSDASTVLXXXXXXXVPVGTSLDREXXXXXXXXXXXXXX 317
           WR++R          + Q++ N +   V+         VG+S                  
Sbjct: 246 WREQR----------SSQNNANRNEVRVVESAEVEEEHVGSS------------------ 277

Query: 318 XXXXDRNLVRAEEGRLPIRETNSELSTPLIGNAANVQLRRAEDELDESLMLEGIGLGSSG 377
                                 +E+S PLI        RR E   +    LEGIGLGSSG
Sbjct: 278 --------------------ERAEISVPLID-------RRPEQAENSETFLEGIGLGSSG 310

Query: 378 AIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITLMLLALYQKALPALPVSVA 437
           AIKLGLGDFIFYSVLVGRAAMYD MTVYACYLAIIAGLGITLMLL++YQKALPALPVS+ 
Sbjct: 311 AIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIIAGLGITLMLLSVYQKALPALPVSIM 370

Query: 438 LGVLFYFLTRLLLEVFVVQCSLNLLMF 464
           LGV+FYFL RLLLEVFVVQCS NL+MF
Sbjct: 371 LGVVFYFLARLLLEVFVVQCSSNLVMF 397


>AT1G08700.1 | Symbols: PS1 | Presenilin-1 | chr1:2769885-2771348
           REVERSE LENGTH=453
          Length = 453

 Score =  353 bits (906), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 211/465 (45%), Positives = 282/465 (60%), Gaps = 36/465 (7%)

Query: 20  ILDHLGEELVRIIAPVSICMFLVVILVSILNTGSSFERPTSIATIAYDESTIDSSWDKFL 79
           ILD LG E++ ++APVSICMFLVV+L   L+  +S  +  S A + Y E+  DS+  K  
Sbjct: 5   ILDSLGVEIIGVMAPVSICMFLVVLLTYSLSV-TSDPQIRSAANLIYIENPSDSTTVKLE 63

Query: 80  GALLNSLAFVAMVTFATFILVLLFYFRCTRFLKLYMAFSSFVVLAFLGGAVSLFLIQHFG 139
           G+L N++ FV ++   TFILVLLFY+  T FLK YM FS+F VL  +GGA+ L +IQHF 
Sbjct: 64  GSLANAIVFVVLIAAVTFILVLLFYYNFTNFLKHYMRFSAFFVLGTMGGAIFLSIIQHFS 123

Query: 140 TPIDCVTFFLVLCNFAVVGVMAVFMSKFAIVVTQGYLVVIGILVAYWCTMLPEWTTWAML 199
            P+D +T F++L NF ++G ++VF     IV+ Q Y+VV+GI+VA W T LPEWTTW +L
Sbjct: 124 IPVDSITCFILLFNFTILGTLSVFAGGIPIVLRQCYMVVMGIVVAAWFTKLPEWTTWFIL 183

Query: 200 VAMALYDLAAVLLPVGPLRILVELAITRDEEIPALVYEARPVNHDNVDPREVVAQRRMWR 259
           VA+ALYDL AVL P GPL++LVELA +RDEE+PA+VYEARP        R   +  R   
Sbjct: 184 VALALYDLVAVLAPGGPLKLLVELASSRDEELPAMVYEARPTVSSGNQRRNRGSSLRALV 243

Query: 260 D------------RRIQNSDGRGLSAEQSHFNSDASTVLXXXXXXXVPVGT----SLDRE 303
                        + ++N D   L  E SH     +  +         +G      L+R 
Sbjct: 244 GGGGVSDSGSVELQAVRNHDVNQLGRENSHNMDYNAIAVRDIDNVDDGIGNGSRGGLERS 303

Query: 304 XXXXXXXXXXXXXXXXXXDRNLVRAEEGRLPIRET--NSELS--TPLIGNAANVQLRRAE 359
                             + +      G +  RE+  + E+S    L+G   N +  R  
Sbjct: 304 ---------PLVGSPSASEHSTSVGTRGNMEDRESVMDEEMSPLVELMGWGDNREEARGL 354

Query: 360 DELDESLMLEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITL 419
           +E D  + +      S+  IKLGLGDFIFYSVLVGRAAMYD MTVYACYLAII+GLG TL
Sbjct: 355 EESDNVVDI------SNRGIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIISGLGCTL 408

Query: 420 MLLALYQKALPALPVSVALGVLFYFLTRLLLEVFVVQCSLNLLMF 464
           +LL++Y +ALPALP+S+ LGV+FYFLTRLL+E FVV  + NL+MF
Sbjct: 409 ILLSVYNRALPALPISIMLGVVFYFLTRLLMEPFVVGVTTNLMMF 453