Miyakogusa Predicted Gene

Lj4g3v1719690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1719690.1 CUFF.49702.1
         (645 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase...   797   0.0  
AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 | chr5:2456...   791   0.0  
AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of t...   535   e-152
AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |...   265   9e-71
AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |...   263   2e-70
AT5G61050.1 | Symbols:  | histone deacetylase-related / HD-relat...   245   8e-65
AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |...   183   4e-46
AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase...   166   6e-41
AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone ...   105   1e-22
AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |...   105   1e-22
AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 | h...    99   1e-20
AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 | chr...    94   4e-19
AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 | chr5:137701...    78   2e-14
AT5G26040.2 | Symbols: HDA2 | histone deacetylase 2 | chr5:90993...    70   5e-12
AT5G26040.1 | Symbols: HDA2 | histone deacetylase 2 | chr5:90993...    53   7e-07

>AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase 5
           | chr5:24567137-24570917 REVERSE LENGTH=660
          Length = 660

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/633 (60%), Positives = 479/633 (75%), Gaps = 15/633 (2%)

Query: 5   QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
           QR+VGL+YDE MCKH  PD   HPE PDRIRVIW KLQ  G++ RCV+L + KAED+ L 
Sbjct: 24  QRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHLQ 83

Query: 65  SVHTKKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASR 124
            VHTK HV+L+  IS+K  D RR +IA +L+S+Y N GSSEAAYLAAGS +++ ++VA  
Sbjct: 84  LVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAGSVVKLAEKVAEG 143

Query: 125 ELHSAVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGN 184
           EL    A+VRPPGHHAE +EA GFCLFNNVAVAAS+LL++RPDLGVKKILIVDWD+HHGN
Sbjct: 144 ELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGN 203

Query: 185 GTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDAD 244
           GTQK+F  D RVLFFSVHRHE+G FYP+ DDG Y M+G+G G G+NINVPW+ GRCGDAD
Sbjct: 204 GTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQGRCGDAD 263

Query: 245 YIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRV 304
           Y+A WDHIL+PVA+EF+PD+I +SAGFDAA+ DPLGGC VTP+GYSV+LKKL+  A+G++
Sbjct: 264 YLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKLMEFAQGKI 323

Query: 305 VLVLEGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRVIQAVRQELSPFWPTL 364
           VL LEGGYNLDSIAKS  AC++VLLEDK + G  EAYPFESTWRVIQAVR+ L  +WP+L
Sbjct: 324 VLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFESTWRVIQAVRKRLCTYWPSL 383

Query: 365 ACELPQKLISQIAPPPXXXXXXXXXXXXXXKGQINSEKLAELLEDVIKPLSKLN-----V 419
           A EL  KLI+Q  P P                   +E  A+ L D +  LS  N     +
Sbjct: 384 ADELSWKLINQKTPTPIILISSSDS---------ETEDNAQGLLDQMSKLSIENPQGTLL 434

Query: 420 DADEETDASSSWRSELSNVCIWYASYGSNMWKSRLSCYIAGGQVEGMQKHCPGSVNKTLP 479
           +  +   AS+SWR++L+ V +WYAS+GSNMWK R  CYI GGQV+G++K C GS++K+ P
Sbjct: 435 ENHQVEPASTSWRADLAKVDVWYASFGSNMWKPRFLCYIQGGQVDGLKKVCVGSMDKSPP 494

Query: 480 KEILWKTFPCHIFFGRDFSRSWGPGGVAFLNPERNMQHSTYLCLYKISLEQFNDILFHEN 539
           KE +W+TFP  +FFGR+ S  WG GGVAF NP  N+   T++CLY+I+LEQFND+L  EN
Sbjct: 495 KETVWETFPHRLFFGRESSVGWGVGGVAFTNPLANLIDQTHMCLYRITLEQFNDVLSQEN 554

Query: 540 GLSLNAGSPLFDTTTLNTISVKEFDSQEIVKGGWYGNVVYLGKEQDIPIITMTCSLHDIE 599
           GL++++ SP+FD   L  +  K     E     WYGNVV LGKE+DIPI+TMTC+L  +E
Sbjct: 555 GLNVDSDSPVFDLAALQLVDNKG-SILEAPLNSWYGNVVCLGKERDIPILTMTCTLSAVE 613

Query: 600 RFKSGKLPLRAPNKAYANTLIKGLVEGEQLSED 632
           +FKSG++P+R P KAYANTLI+GLVEG +LS++
Sbjct: 614 KFKSGEIPIRPPAKAYANTLIRGLVEGGRLSKE 646


>AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 |
           chr5:24567137-24570917 REVERSE LENGTH=664
          Length = 664

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/637 (59%), Positives = 479/637 (75%), Gaps = 19/637 (2%)

Query: 5   QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
           QR+VGL+YDE MCKH  PD   HPE PDRIRVIW KLQ  G++ RCV+L + KAED+ L 
Sbjct: 24  QRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHLQ 83

Query: 65  SVHTKKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASR 124
            VHTK HV+L+  IS+K  D RR +IA +L+S+Y N GSSEAAYLAAGS +++ ++VA  
Sbjct: 84  LVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAGSVVKLAEKVAEG 143

Query: 125 ELHSAVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGN 184
           EL    A+VRPPGHHAE +EA GFCLFNNVAVAAS+LL++RPDLGVKKILIVDWD+HHGN
Sbjct: 144 ELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGN 203

Query: 185 GTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDAD 244
           GTQK+F  D RVLFFSVHRHE+G FYP+ DDG Y M+G+G G G+NINVPW+ GRCGDAD
Sbjct: 204 GTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQGRCGDAD 263

Query: 245 YIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKK----LLHLA 300
           Y+A WDHIL+PVA+EF+PD+I +SAGFDAA+ DPLGGC VTP+GYSV+LKK    L+  A
Sbjct: 264 YLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKVGVELMEFA 323

Query: 301 EGRVVLVLEGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRVIQAVRQELSPF 360
           +G++VL LEGGYNLDSIAKS  AC++VLLEDK + G  EAYPFESTWRVIQAVR+ L  +
Sbjct: 324 QGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFESTWRVIQAVRKRLCTY 383

Query: 361 WPTLACELPQKLISQIAPPPXXXXXXXXXXXXXXKGQINSEKLAELLEDVIKPLSKLN-- 418
           WP+LA EL  KLI+Q  P P                   +E  A+ L D +  LS  N  
Sbjct: 384 WPSLADELSWKLINQKTPTPIILISSSDS---------ETEDNAQGLLDQMSKLSIENPQ 434

Query: 419 ---VDADEETDASSSWRSELSNVCIWYASYGSNMWKSRLSCYIAGGQVEGMQKHCPGSVN 475
              ++  +   AS+SWR++L+ V +WYAS+GSNMWK R  CYI GGQV+G++K C GS++
Sbjct: 435 GTLLENHQVEPASTSWRADLAKVDVWYASFGSNMWKPRFLCYIQGGQVDGLKKVCVGSMD 494

Query: 476 KTLPKEILWKTFPCHIFFGRDFSRSWGPGGVAFLNPERNMQHSTYLCLYKISLEQFNDIL 535
           K+ PKE +W+TFP  +FFGR+ S  WG GGVAF NP  N+   T++CLY+I+LEQFND+L
Sbjct: 495 KSPPKETVWETFPHRLFFGRESSVGWGVGGVAFTNPLANLIDQTHMCLYRITLEQFNDVL 554

Query: 536 FHENGLSLNAGSPLFDTTTLNTISVKEFDSQEIVKGGWYGNVVYLGKEQDIPIITMTCSL 595
             ENGL++++ SP+FD   L  +  K     E     WYGNVV LGKE+DIPI+TMTC+L
Sbjct: 555 SQENGLNVDSDSPVFDLAALQLVDNKG-SILEAPLNSWYGNVVCLGKERDIPILTMTCTL 613

Query: 596 HDIERFKSGKLPLRAPNKAYANTLIKGLVEGEQLSED 632
             +E+FKSG++P+R P KAYANTLI+GLVEG +LS++
Sbjct: 614 SAVEKFKSGEIPIRPPAKAYANTLIRGLVEGGRLSKE 650


>AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of the
           RPD3/HDA1 superfamily 18 | chr5:24571297-24574372
           REVERSE LENGTH=682
          Length = 682

 Score =  535 bits (1377), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 247/360 (68%), Positives = 292/360 (81%)

Query: 5   QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
           QR+VGL+YDE MCKH  P+     E PDRIRVIW KLQ  G+T RCV+L   KAED+ L 
Sbjct: 57  QRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKLQLAGVTQRCVVLGGSKAEDKHLK 116

Query: 65  SVHTKKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASR 124
            VHTKKHV+L+  IS+K  DSRR KIA +LDS+Y N GSSEAAYLAAGS ++V ++VA  
Sbjct: 117 LVHTKKHVNLVKSISTKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAGSVVKVAEKVAEG 176

Query: 125 ELHSAVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGN 184
           EL    A+VRPPGHHAE +EA GFCLFNNVAVAAS+LL++RPDL VKKILIVDWDIHHGN
Sbjct: 177 ELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIVDWDIHHGN 236

Query: 185 GTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDAD 244
           GTQK+F  DSRVL FSVHRH+ GSFYP  DDG + M+G+G G G+NINVPWE G CGDAD
Sbjct: 237 GTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWEQGGCGDAD 296

Query: 245 YIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRV 304
           Y+AVW+HIL+PV KEF PDII++SAGFDAA+GDPLGGC VTP+GYSV+LKKL+  A G++
Sbjct: 297 YLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKKLMEFAHGKI 356

Query: 305 VLVLEGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRVIQAVRQELSPFWPTL 364
           VL LEGGYNL+S+ KS  AC++VLLEDK + GSSE YP EST RVIQAVR+ L  +WP+L
Sbjct: 357 VLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLESTRRVIQAVRERLCTYWPSL 416


>AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
           chr3:6361605-6365399 FORWARD LENGTH=564
          Length = 564

 Score =  265 bits (676), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 161/373 (43%), Positives = 219/373 (58%), Gaps = 26/373 (6%)

Query: 12  YDERMCKHHVPDDGY--HPETPDRIRVIWNKLQSTGI-TDRCVILEAKKAEDEQLLSVHT 68
           +DERM  H   +     HPE PDR+R I   L + G+   RC+ + A++   ++L  VHT
Sbjct: 154 FDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHT 213

Query: 69  KKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHS 128
            +HVD ++  S  LY       ++     Y NE S+ AA LAAG   ++   + +  + +
Sbjct: 214 SEHVDAVDTTSQLLY-------SYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKN 266

Query: 129 AVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQK 188
             A+VRPPGHHA    A GFCL NN AVAA            KK+LIVDWD+HHGNGTQ+
Sbjct: 267 GFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAG----AKKVLIVDWDVHHGNGTQE 322

Query: 189 IFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAV 248
           IF  +  VL+ S+HRHE G+FYP +  G    +G   G GY +NVPW  G  GD DYI  
Sbjct: 323 IFEQNKSVLYISLHRHEGGNFYPGT--GAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFA 380

Query: 249 WDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRVVLVL 308
           + H++LP+A  FSPD +I+SAGFDAA GDPLG C VTP GYS + + L  L  G+++++L
Sbjct: 381 FQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVIL 440

Query: 309 EGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRV--IQAVRQELS---PFWPT 363
           EGGYNL SI+ S  A ++VLL + P        P  +T  V  +Q V   L+    FWP+
Sbjct: 441 EGGYNLRSISASATAVIKVLLGENP----ENELPIATTPSVAGLQTVLDVLNIQLEFWPS 496

Query: 364 LACELPQKLISQI 376
           LA     KL+S++
Sbjct: 497 LAISY-SKLLSEL 508


>AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
           chr3:6361605-6365367 FORWARD LENGTH=552
          Length = 552

 Score =  263 bits (673), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 161/373 (43%), Positives = 219/373 (58%), Gaps = 26/373 (6%)

Query: 12  YDERMCKHHVPDDGY--HPETPDRIRVIWNKLQSTGI-TDRCVILEAKKAEDEQLLSVHT 68
           +DERM  H   +     HPE PDR+R I   L + G+   RC+ + A++   ++L  VHT
Sbjct: 154 FDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHT 213

Query: 69  KKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHS 128
            +HVD ++  S  LY       ++     Y NE S+ AA LAAG   ++   + +  + +
Sbjct: 214 SEHVDAVDTTSQLLY-------SYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKN 266

Query: 129 AVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQK 188
             A+VRPPGHHA    A GFCL NN AVAA            KK+LIVDWD+HHGNGTQ+
Sbjct: 267 GFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAG----AKKVLIVDWDVHHGNGTQE 322

Query: 189 IFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAV 248
           IF  +  VL+ S+HRHE G+FYP +  G    +G   G GY +NVPW  G  GD DYI  
Sbjct: 323 IFEQNKSVLYISLHRHEGGNFYPGT--GAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFA 380

Query: 249 WDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRVVLVL 308
           + H++LP+A  FSPD +I+SAGFDAA GDPLG C VTP GYS + + L  L  G+++++L
Sbjct: 381 FQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVIL 440

Query: 309 EGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRV--IQAVRQELS---PFWPT 363
           EGGYNL SI+ S  A ++VLL + P        P  +T  V  +Q V   L+    FWP+
Sbjct: 441 EGGYNLRSISASATAVIKVLLGENP----ENELPIATTPSVAGLQTVLDVLNIQLEFWPS 496

Query: 364 LACELPQKLISQI 376
           LA     KL+S++
Sbjct: 497 LAISY-SKLLSEL 508


>AT5G61050.1 | Symbols:  | histone deacetylase-related / HD-related
           | chr5:24565482-24566615 REVERSE LENGTH=252
          Length = 252

 Score =  245 bits (625), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 114/212 (53%), Positives = 151/212 (71%)

Query: 419 VDADEETDASSSWRSELSNVCIWYASYGSNMWKSRLSCYIAGGQVEGMQKHCPGSVNKTL 478
           V+ ++   AS+SWR +L+ V +WYASYGSNMWK R  CYI GGQ EGM K C GS++K+ 
Sbjct: 25  VEKEQVDTASTSWRIDLAKVDVWYASYGSNMWKPRFICYIQGGQAEGMIKACVGSMDKSP 84

Query: 479 PKEILWKTFPCHIFFGRDFSRSWGPGGVAFLNPERNMQHSTYLCLYKISLEQFNDILFHE 538
           PKEI+WKTFP  + FGR+ S  WG GGVA+ NP  N+   T++CLY+I+LEQFND+LF E
Sbjct: 85  PKEIMWKTFPHRLLFGRETSMFWGVGGVAYTNPLTNLNDQTHMCLYRITLEQFNDLLFQE 144

Query: 539 NGLSLNAGSPLFDTTTLNTISVKEFDSQEIVKGGWYGNVVYLGKEQDIPIITMTCSLHDI 598
           N L++++  P FD   L     +   S +      YGNVV LGKE  IPI+T+TC+L  +
Sbjct: 145 NELNVDSDYPFFDLAALRLAEKEGSISLQTASDSLYGNVVCLGKEGVIPILTLTCTLSVV 204

Query: 599 ERFKSGKLPLRAPNKAYANTLIKGLVEGEQLS 630
           E+FKSG++P+R P KAYANTLI+GLV+G + S
Sbjct: 205 EKFKSGEIPIRPPAKAYANTLIRGLVKGGRFS 236


>AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |
           chr4:16102774-16105439 REVERSE LENGTH=423
          Length = 423

 Score =  183 bits (464), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/347 (36%), Positives = 182/347 (52%), Gaps = 27/347 (7%)

Query: 27  HPETPDRIRVIWNKLQSTGITDR---CVILEA---KKAEDEQLLSVHTKKHVDLINKISS 80
           HPE   R+  I N L+   +T +     ILE    K A  E + +VH K +V  + K   
Sbjct: 80  HPECSARVPAIVNALEMNELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKAMD 139

Query: 81  KLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHS-----AVAVVRP 135
           +  DS  + I       Y    + + + +AAG+ + +V  V +   +S       A++RP
Sbjct: 140 EASDSGLIFIEGS-GPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIRP 198

Query: 136 PGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQKIFLDDSR 195
           PGHHA P    GFC+F NVA+AA +   QR   G+K+I I+D+D+HHGNGT   F +D  
Sbjct: 199 PGHHAVPKGPMGFCVFGNVAIAARHA--QRTH-GLKRIFIIDFDVHHGNGTNDAFTEDPD 255

Query: 196 VLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAVWDHILLP 255
           + F S H+   GS YP +  G  + IGKG G G  +N+P   G  GD     V++ I++P
Sbjct: 256 IFFLSTHQD--GS-YPGT--GKISDIGKGKGEGTTLNLPLPGGS-GDIAMRTVFEEIIVP 309

Query: 256 VAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAE----GRVVLVLEGG 311
            A+ F PDII+VSAG+DA V DPL   + T   Y  L K +  LA+    GR V  LEGG
Sbjct: 310 CAQRFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFLEGG 369

Query: 312 YNLDSIAKSMHACLEVLLEDKPLIG--SSEAYPFESTWRVIQAVRQE 356
           YNL+S++ S+      LL +  L     + AY ++   R ++   Q 
Sbjct: 370 YNLESLSSSVADSFRALLGEDSLASEFDNPAYLYDEPMRKVRDAIQR 416


>AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase 8
           | chr1:2672527-2674469 FORWARD LENGTH=377
          Length = 377

 Score =  166 bits (419), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 188/381 (49%), Gaps = 39/381 (10%)

Query: 7   RVGLLYDERMCKHH----VPDDGY----------HPETPDRIRVIWNKLQSTGITDRCVI 52
           RV + + E M +H     V D GY          HPE  DR+R + + L+   I      
Sbjct: 5   RVDVFWHEGMLRHDAVEGVFDTGYDPGFLDVLEKHPENADRVRNMLSILRRGPIAPHVNW 64

Query: 53  LEAKKAEDEQLLSVHTKKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAG 112
                A   +LL  HT ++++   K+        R +IA      + + GS EAA LAAG
Sbjct: 65  FTGLPAIVSELLMFHTSEYIE---KLVEADKSGERCEIA---AGTFMSPGSWEAALLAAG 118

Query: 113 SAIEVVKRVASRELHSAVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKK 172
           + +  ++ +       A A+VRPPGHH++P +A G+C  NN A+A    L+        +
Sbjct: 119 TTLSAMQHILDCHGKIAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSG---SCSR 175

Query: 173 ILIVDWDIHHGNGTQKIFLDDSRVLFFSVHRHE--FGSFYPSSDDGFYTMIGKGAGAGYN 230
           + ++D D+H+GNGT + F    +VL  S+H +   +GS +P    G    +G+  G GYN
Sbjct: 176 VAVIDIDVHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQK--GSIDELGEDVGLGYN 233

Query: 231 INVPWENGRCGDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYS 290
           +NVP  NG  GD  Y    + +++P  + F PD++++  G D++  DP G   +T  GY 
Sbjct: 234 LNVPLPNG-TGDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYR 292

Query: 291 VLLKKLLHLAE----GRVVLVLEGGYNLDSIAKSMHACLEVLLE-DKPLIGSSEAYPFES 345
            + + +  +AE    GR+++V EGGY++   A  +HA LE +L+  +P +    AY  E 
Sbjct: 293 RIGQIMRGVAEEHSHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLSDPIAYYPEE 352

Query: 346 TWRVIQAVRQ------ELSPF 360
               + AV        E  PF
Sbjct: 353 EANAVAAVESIKTYHTEFVPF 373


>AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone
           deacetylase 1 | chr4:17896663-17899057 REVERSE
           LENGTH=469
          Length = 469

 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 23/296 (7%)

Query: 5   QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
           +R+V   YD  +  ++      HP  P RIR+    L   G+     +L+   A D  L 
Sbjct: 16  KRKVCYFYDPEVGNYYYGQG--HPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLC 73

Query: 65  SVHTKKHVDLINKIS-----SKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVK 119
             H   +V  +  I+      ++   +R  +    D   F+   S     A GS    VK
Sbjct: 74  RFHADDYVSFLRSITPETQQDQIRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGSVK 131

Query: 120 RVASRELHSAVAVVRPPG-HHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDW 178
                     +A+    G HHA+  EA GFC  N++ +A   LL Q      +++L VD 
Sbjct: 132 LNHGL---CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-----ERVLYVDI 183

Query: 179 DIHHGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENG 238
           DIHHG+G ++ F    RV+  S H+  FG ++P +  G    IG G+G  Y++NVP ++G
Sbjct: 184 DIHHGDGVEEAFYATDRVMTVSFHK--FGDYFPGT--GHIQDIGYGSGKYYSLNVPLDDG 239

Query: 239 RCGDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLK 294
              D  Y  ++  I+  V + F P  +++  G D+  GD LG   ++  G++  +K
Sbjct: 240 -IDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVK 294


>AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |
           histone deacetylase 1 | chr4:17896493-17899057 REVERSE
           LENGTH=501
          Length = 501

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 23/296 (7%)

Query: 5   QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
           +R+V   YD  +  ++      HP  P RIR+    L   G+     +L+   A D  L 
Sbjct: 16  KRKVCYFYDPEVGNYYYGQG--HPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLC 73

Query: 65  SVHTKKHVDLINKIS-----SKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVK 119
             H   +V  +  I+      ++   +R  +    D   F+   S     A GS    VK
Sbjct: 74  RFHADDYVSFLRSITPETQQDQIRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGSVK 131

Query: 120 RVASRELHSAVAVVRPPG-HHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDW 178
                     +A+    G HHA+  EA GFC  N++ +A   LL Q      +++L VD 
Sbjct: 132 LNHGL---CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-----ERVLYVDI 183

Query: 179 DIHHGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENG 238
           DIHHG+G ++ F    RV+  S H+  FG ++P +  G    IG G+G  Y++NVP ++G
Sbjct: 184 DIHHGDGVEEAFYATDRVMTVSFHK--FGDYFPGT--GHIQDIGYGSGKYYSLNVPLDDG 239

Query: 239 RCGDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLK 294
              D  Y  ++  I+  V + F P  +++  G D+  GD LG   ++  G++  +K
Sbjct: 240 -IDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVK 294


>AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 |
           histone deacetylase 6 | chr5:25315834-25318227 REVERSE
           LENGTH=471
          Length = 471

 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 154/323 (47%), Gaps = 26/323 (8%)

Query: 5   QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
           +RRV   Y+  +  ++      HP  P RIR+  + +    +  R  I     A+   + 
Sbjct: 18  KRRVSYFYEPTIGDYYYGQG--HPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIG 75

Query: 65  SVHTKKHVDLINKIS-------SKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEV 117
             H+ ++VD +  +S       S   + RR  +    D   F +G  +    +AG +I  
Sbjct: 76  RFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGE--DCPVF-DGLFDFCRASAGGSIGA 132

Query: 118 VKRVASRELHSAVAVVRPPG-HHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIV 176
             ++  ++  + +A+    G HHA+ +EA GFC  N++ +    LL        K++L +
Sbjct: 133 AVKLNRQD--ADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKM-----FKRVLYI 185

Query: 177 DWDIHHGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWE 236
           D D+HHG+G ++ F    RV+  S H+  FG F+P +  G    +G   G  Y +NVP  
Sbjct: 186 DIDVHHGDGVEEAFYTTDRVMTVSFHK--FGDFFPGT--GHIRDVGAEKGKYYALNVPLN 241

Query: 237 NGRCGDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKL 296
           +G   D  + +++  ++  V + + P+ +++  G D+  GD LG   ++  G++  L + 
Sbjct: 242 DG-MDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCL-RF 299

Query: 297 LHLAEGRVVLVLEGGYNLDSIAK 319
           L      ++++  GGY + ++A+
Sbjct: 300 LRSYNVPLMVLGGGGYTIRNVAR 322


>AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 |
           chr3:16226769-16229752 REVERSE LENGTH=426
          Length = 426

 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 150/311 (48%), Gaps = 23/311 (7%)

Query: 27  HPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLLSVHTKKHVDLINKIS---SKLY 83
           HP  P R+ +  + + + G+  +  +    KA   ++   H+  +V+ + +I+     L+
Sbjct: 24  HPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVEFLQRINPENQNLF 83

Query: 84  DSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHSAVAVVRPPG-HHAEP 142
            +   +     D   F E   E   L AG  I+  +R+ ++     +A+    G HHA+ 
Sbjct: 84  PNEMARYNLGEDCPVF-EDLFEFCQLYAGGTIDAARRLNNKL--CDIAINWAGGLHHAKK 140

Query: 143 NEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQKIFLDDSRVLFFSVH 202
            +A GFC  N++ +    LL   P     ++L +D D+HHG+G ++ F    RV+  +V 
Sbjct: 141 CDASGFCYINDLVLGILELLKHHP-----RVLYIDIDVHHGDGVEEAFYFTDRVM--TVS 193

Query: 203 RHEFGS-FYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAVWDHILLPVAKEFS 261
            H+FG  F+P + D     IG+  G  Y INVP ++G   D+ +  ++  I+  V + + 
Sbjct: 194 FHKFGDKFFPGTGD--VKEIGEREGKFYAINVPLKDG-IDDSSFNRLFRTIISKVVEIYQ 250

Query: 262 PDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLK--KLLHLAEGRVVLVLEGGYNLDSIAK 319
           P  I++  G D+   D LG   ++  G++  +K  K  +L    +++   GGY  +++A+
Sbjct: 251 PGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLP---LLVTGGGGYTKENVAR 307

Query: 320 SMHACLEVLLE 330
                  +LL+
Sbjct: 308 CWTVETGILLD 318


>AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 |
           chr5:13770121-13771712 REVERSE LENGTH=409
          Length = 409

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 32/329 (9%)

Query: 2   ESGQRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDE 61
           + G+RRV   Y+  +  ++   +   P  P RIRV  N + S  +     I     A+  
Sbjct: 6   DGGKRRVSYFYEPMIGDYYYGVN--QPTKPQRIRVTHNLILSYNLHRHMEINHPDLADAS 63

Query: 62  QLLSVHTKKHVDLINKISSKLYDSRRLKIAHKLDS----------VYFNEGSSEAAYLAA 111
                H+ ++++ +  ++ +        ++  L            V+ N      AY  A
Sbjct: 64  DFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAY--A 121

Query: 112 GSAIEVVKRVASRELHSAVAVVRPPG-HHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGV 170
           G +I    ++  +E  + +A+    G HH + ++A GF   N+V +A   LL        
Sbjct: 122 GGSISAAAKLNRQE--ADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKS-----F 174

Query: 171 KKILIVDWDIHHGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYN 230
           K++L ++    HG+  ++ F D  RV+  S H+          D G  +  G+G G  Y+
Sbjct: 175 KRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHK--------VGDTGDISDYGEGKGQYYS 226

Query: 231 INVPWENGRCGDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYS 290
           +N P ++G   D     ++  ++    + + P++I++  G D+  GDP G   ++  G+ 
Sbjct: 227 LNAPLKDG-LDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHG 285

Query: 291 VLLKKLLHLAEGRVVLVLEGGYNLDSIAK 319
             L+ +       ++L   GGY L ++A+
Sbjct: 286 DCLQYVRSFNVPLMILG-GGGYTLPNVAR 313


>AT5G26040.2 | Symbols: HDA2 | histone deacetylase 2 |
           chr5:9099321-9101598 REVERSE LENGTH=387
          Length = 387

 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 20/194 (10%)

Query: 138 HHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQKIFLDDSRVL 197
           HH       GFC F ++++   +   +   L + +++I+D D H GNG +    DD+RV 
Sbjct: 200 HHCTAERGGGFCAFADISLCIHFAFLR---LRISRVMIIDLDAHQGNGHETDLGDDNRVY 256

Query: 198 FFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAVWDHILLPVA 257
              ++  E    YP             A    +  V   +G   D +Y+   D  L   +
Sbjct: 257 ILDMYNPEI---YP---------FDYRARRFIDQKVEVMSGTTTD-EYLRKLDEALEVAS 303

Query: 258 KEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGR---VVLVLEGGYNL 314
           + F P+++I +AG D   GDPLG  +++P G +   +K+   A  +   +V++  GGY +
Sbjct: 304 RNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGY-M 362

Query: 315 DSIAKSMHACLEVL 328
            S A+ +   +E L
Sbjct: 363 KSSARVIADSIENL 376


>AT5G26040.1 | Symbols: HDA2 | histone deacetylase 2 |
           chr5:9099321-9101598 REVERSE LENGTH=359
          Length = 359

 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 17/155 (10%)

Query: 177 DWDIHHGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWE 236
           D D H GNG +    DD+RV    ++  E    YP             A    +  V   
Sbjct: 208 DLDAHQGNGHETDLGDDNRVYILDMYNPEI---YP---------FDYRARRFIDQKVEVM 255

Query: 237 NGRCGDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKL 296
           +G   D +Y+   D  L   ++ F P+++I +AG D   GDPLG  +++P G +   +K+
Sbjct: 256 SGTTTD-EYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKV 314

Query: 297 LHLAEGR---VVLVLEGGYNLDSIAKSMHACLEVL 328
              A  +   +V++  GGY + S A+ +   +E L
Sbjct: 315 FRFAREKNIPLVMLTSGGY-MKSSARVIADSIENL 348