Miyakogusa Predicted Gene

Lj4g3v1709680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1709680.1 Non Chatacterized Hit- tr|F6H2Z9|F6H2Z9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.95,3e-19,BURP,BURP domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.49617.1
         (77 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G25610.1 | Symbols: RD22, ATRD22 | BURP domain-containing pro...   115   6e-27
AT1G49320.1 | Symbols: ATUSPL1, USPL1 | unknown seed protein lik...    80   3e-16
AT1G70370.2 | Symbols: PG2 | polygalacturonase 2 | chr1:26513003...    59   8e-10
AT1G70370.1 | Symbols: PG2 | polygalacturonase 2 | chr1:26513003...    59   8e-10
AT1G60390.1 | Symbols: PG1 | polygalacturonase 1 | chr1:22247611...    55   9e-09
AT1G23760.1 | Symbols: JP630, PG3 | BURP domain-containing prote...    51   1e-07

>AT5G25610.1 | Symbols: RD22, ATRD22 | BURP domain-containing
           protein | chr5:8914498-8916684 REVERSE LENGTH=392
          Length = 392

 Score =  115 bits (288), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 47/74 (63%), Positives = 61/74 (82%)

Query: 3   YPYVVFRCQESQNSTAYFVPLEGDDGVRIKSVAVCHRNTSTWNPDHVAFQALKVKPGTVP 62
           YP+ VF C ++  +T Y VPLEG++G+R K+VAVCH+NTS WNP+H+AF+ LKVKPGTVP
Sbjct: 318 YPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVP 377

Query: 63  VCHFFPEGHLLWLS 76
           VCHF PE H++W S
Sbjct: 378 VCHFLPETHVVWFS 391


>AT1G49320.1 | Symbols: ATUSPL1, USPL1 | unknown seed protein like 1
           | chr1:18246441-18247817 FORWARD LENGTH=280
          Length = 280

 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 2/79 (2%)

Query: 1   MTYPYVVFRCQESQNSTAYF-VPLEGDDG-VRIKSVAVCHRNTSTWNPDHVAFQALKVKP 58
           M YPY V+ C   +  +  F V L  DDG  R+   AVCH +TSTW+ DHVAF+ LK++P
Sbjct: 202 MPYPYAVYYCHGHKGGSRVFEVNLVTDDGRQRVVGPAVCHMDTSTWDADHVAFKVLKMEP 261

Query: 59  GTVPVCHFFPEGHLLWLSK 77
            + PVCHFFP  +++W++K
Sbjct: 262 RSAPVCHFFPLDNIVWVTK 280


>AT1G70370.2 | Symbols: PG2 | polygalacturonase 2 |
           chr1:26513003-26514998 REVERSE LENGTH=626
          Length = 626

 Score = 58.5 bits (140), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 3   YPYVVFRCQESQNSTAYFVPL-EGDDGVRIK-SVAVCHRNTSTWNPDHVAFQALKVKPGT 60
           YPY+++ C        Y   L E +   +I   +A+CH +TS+W P H AF AL  KPG 
Sbjct: 549 YPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGR 608

Query: 61  VPVCHFFPEGHLLW 74
           + VCH+  E  + W
Sbjct: 609 IEVCHWIFENDMNW 622


>AT1G70370.1 | Symbols: PG2 | polygalacturonase 2 |
           chr1:26513003-26514998 REVERSE LENGTH=626
          Length = 626

 Score = 58.5 bits (140), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 3   YPYVVFRCQESQNSTAYFVPL-EGDDGVRIK-SVAVCHRNTSTWNPDHVAFQALKVKPGT 60
           YPY+++ C        Y   L E +   +I   +A+CH +TS+W P H AF AL  KPG 
Sbjct: 549 YPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGR 608

Query: 61  VPVCHFFPEGHLLW 74
           + VCH+  E  + W
Sbjct: 609 IEVCHWIFENDMNW 622


>AT1G60390.1 | Symbols: PG1 | polygalacturonase 1 |
           chr1:22247611-22249556 REVERSE LENGTH=624
          Length = 624

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 3   YPYVVFRCQESQNSTAYFVPLEGDDGVRI--KSVAVCHRNTSTWNPDHVAFQALKVKPGT 60
           YPY+++ C        Y   L     +      VA+CH +TS W+P H AF AL   PG 
Sbjct: 547 YPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQ 606

Query: 61  VPVCHFFPEGHLLW 74
           + VCH+  E  + W
Sbjct: 607 IEVCHWIFENDMTW 620


>AT1G23760.1 | Symbols: JP630, PG3 | BURP domain-containing protein
           | chr1:8402142-8404147 FORWARD LENGTH=622
          Length = 622

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 3   YPYVVFRCQESQNSTAYFVPL-EGDDGVRIK-SVAVCHRNTSTWNPDHVAFQALKVKPGT 60
           YPY+++ C        Y   L +     +I   +A+CH +TS W  +H AF  L  +PG 
Sbjct: 545 YPYLLYYCHSVPKVRVYESDLLDPKSKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQ 604

Query: 61  VPVCHFFPEGHLLW 74
           + VCH+  E  + W
Sbjct: 605 IEVCHWIFENDMNW 618