Miyakogusa Predicted Gene

Lj4g3v1686520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1686520.1 tr|C4WL33|C4WL33_9RHIZ Alcohol dehydrogenase
OS=Ochrobactrum intermedium LMG 3301 GN=OINT_2000726
PE,62.9,2e-19,GroES-like,GroES-like; seg,NULL; QUINONE OXIDOREDUCTASE,
BACTERIA AND PLANT,NULL; ALCOHOL DEHYDROGEN,gene.g55456.t1.1
         (132 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61510.1 | Symbols:  | GroES-like zinc-binding alcohol dehydr...   123   3e-29

>AT5G61510.1 | Symbols:  | GroES-like zinc-binding alcohol
           dehydrogenase family protein | chr5:24737084-24738975
           REVERSE LENGTH=406
          Length = 406

 Score =  123 bits (309), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 60/64 (93%)

Query: 60  EMVKAIRVHELGGPQVLKWEDVEIGEPKEGEVRVKNKAIGVNFIDVYFRKGVYKASSTPF 119
           +MVK IRV+E GGP+VLKWEDVE+GEPKEGE+RVKNKAIG+NFIDVYFRKGVYK +S PF
Sbjct: 82  KMVKGIRVYEHGGPEVLKWEDVEVGEPKEGEIRVKNKAIGLNFIDVYFRKGVYKPASMPF 141

Query: 120 TPGM 123
           TPGM
Sbjct: 142 TPGM 145