Miyakogusa Predicted Gene

Lj4g3v1683090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1683090.1 tr|G7JGQ4|G7JGQ4_MEDTR Eukaryotic translation
initiation factor 5A-1 OS=Medicago truncatula
GN=MTR_4,43.75,5e-16,eIF-5a,Translation elongation factor, IF5A
C-terminal; TRANSLATION INITIATION FACTOR 5A-RELATED,Tran,CUFF.49625.1
         (160 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13950.1 | Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A | eukar...   293   3e-80
AT1G69410.1 | Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongatio...   278   1e-75
AT1G26630.1 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic tr...   265   1e-71
AT1G26630.2 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic tr...   222   7e-59

>AT1G13950.1 | Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A |
           eukaryotic elongation factor 5A-1 | chr1:4773631-4774668
           FORWARD LENGTH=158
          Length = 158

 Score =  293 bits (750), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 143/159 (89%), Positives = 148/159 (93%), Gaps = 1/159 (0%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFES +DAGASKTYPQQAGTIRKNGYI IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV RTDYQLIDISEDG+VSLLT++G TKDDLKLP D
Sbjct: 60  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPND 119

Query: 121 DALLTQIKEGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
           D LL QIK GF +GKDLVVSVMSAMGEEQINALKDIGPK
Sbjct: 120 DTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158


>AT1G69410.1 | Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongation
           factor 5A-3 | chr1:26089301-26090194 FORWARD LENGTH=158
          Length = 158

 Score =  278 bits (711), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 135/159 (84%), Positives = 146/159 (91%), Gaps = 1/159 (0%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFES +DAGASKTYPQQAG IRK G+I IK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV R DYQLIDISEDGFVSLLT++G TKDDLKLPTD
Sbjct: 60  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 119

Query: 121 DALLTQIKEGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
           +ALLTQ+K GF EGKD+VVSVMSAMGEEQ+ ALK++GPK
Sbjct: 120 EALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158


>AT1G26630.1 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic
           translation initiation factor 5A-1 (eIF-5A 1) protein |
           chr1:9205968-9207098 FORWARD LENGTH=159
          Length = 159

 Score =  265 bits (676), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 127/157 (80%), Positives = 142/157 (90%), Gaps = 1/157 (0%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+I IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV R DYQLIDI+EDGFVSLLT+SGGTKDDLKLPTD
Sbjct: 60  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 119

Query: 121 DALLTQIKEGFAEGKDLVVSVMSAMGEEQINALKDIG 157
           D L  Q++ GF EGKD+VVSVMS+MGEEQI A+K++G
Sbjct: 120 DGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156


>AT1G26630.2 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic
           translation initiation factor 5A-1 (eIF-5A 1) protein |
           chr1:9205968-9207013 FORWARD LENGTH=138
          Length = 138

 Score =  222 bits (566), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 106/127 (83%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+I IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV R DYQLIDI+EDGFVSLLT+SGGTKDDLKLPTD
Sbjct: 60  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 119

Query: 121 DALLTQI 127
           D L  Q+
Sbjct: 120 DGLTAQL 126