Miyakogusa Predicted Gene
- Lj4g3v1658740.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1658740.1 Non Chatacterized Hit- tr|A5BYV5|A5BYV5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,24.2,9e-18,PROKAR_LIPOPROTEIN,NULL; PPR,Pentatricopeptide repeat;
PPR: pentatricopeptide repeat domain,Pentatri,CUFF.49550.1
(550 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 351 1e-96
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 1e-94
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 1e-90
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 329 3e-90
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 4e-90
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 1e-89
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 322 3e-88
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 322 3e-88
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 9e-86
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 5e-85
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 308 7e-84
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 306 3e-83
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 4e-83
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 5e-82
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 300 2e-81
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 299 3e-81
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 299 4e-81
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 299 4e-81
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 298 9e-81
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 8e-80
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 3e-79
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 5e-79
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 3e-78
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 5e-78
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 6e-78
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 286 3e-77
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 5e-77
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 6e-77
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 282 4e-76
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 1e-75
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 280 2e-75
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 7e-75
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 8e-75
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 5e-74
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 275 7e-74
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 272 4e-73
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 271 7e-73
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 266 2e-71
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 9e-71
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 265 9e-71
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 9e-71
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 2e-69
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 5e-69
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 258 9e-69
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 257 2e-68
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 256 2e-68
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 255 5e-68
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 7e-68
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 254 1e-67
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 253 3e-67
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 251 1e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 8e-65
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 244 9e-65
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 2e-64
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 4e-64
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 5e-63
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 239 5e-63
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 5e-62
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 235 7e-62
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 8e-62
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 9e-62
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 233 2e-61
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 2e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 232 4e-61
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 6e-61
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 1e-60
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 225 6e-59
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 7e-58
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 8e-57
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 8e-56
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 4e-55
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 206 3e-53
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 205 6e-53
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 7e-53
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 9e-53
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 1e-52
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 2e-52
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 6e-52
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 6e-50
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 191 1e-48
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 8e-47
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 179 5e-45
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 6e-45
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 5e-43
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 6e-41
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 6e-40
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 9e-30
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 114 2e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 93 4e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 90 4e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 88 2e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 87 4e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 86 5e-17
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 76 8e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 9e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 70 4e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 7e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 2e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 6e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 63 5e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 58 2e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 57 2e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 55 1e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 3e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 51 3e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/502 (39%), Positives = 283/502 (56%), Gaps = 15/502 (2%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS---DQLQHAHKLFSTID 75
+ LQ C+ + L QIH++++ GL Q + ITK LSF I+S D L +A +F D
Sbjct: 17 TMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD 76
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
P T +WN +IRG++ S P +S+ Y++M+ + A N +T+ LL AC E Q
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H + GY ++V+ +LIN YA G + A +FD + + VSWNS++ GYV G
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
D A +F +M +N +SWTTMI+G Q K+AL LF EM+ + VE
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
G L+ G+WIH Y+ + + + SV L LI MYA CG + +A +VF + ++
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRI----RMDSV-LGCVLIDMYAKCGEMEEALEVFKNIKKK 311
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
S +WT++I +A G G+EA+ F M G++P+ IT VL AC + G V+E
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQK-----MGIKPNVITFTAVLTACSYTGLVEE 366
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G+ IF SM R + + P IEHYGC+VDLL RAG LDEA I+ MPLKPN +WGALL C
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
+IHKN EL + L+A G G V +NI+A K+W R+ M E GV K
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHG--GRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 484
Query: 496 PGQSWIQINGVVHDFVAGDMTH 517
PG S I + G H+F+AGD +H
Sbjct: 485 PGCSTISLEGTTHEFLAGDRSH 506
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/551 (36%), Positives = 298/551 (54%), Gaps = 33/551 (5%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD----QLQHAHKLFSTI 74
+F + +C I++L QIH+ + +G + T ++L F SD L +AHK+F+ +
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 75 DNPSTTVWNHIIRGYARSHTPWK--SVECYRQMVSTE-AEPNGFTYSFLLSACVRGGLLR 131
+ WN IIRG++ S ++ + +M+S E EPN FT+ +L AC + G ++
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG---------MGQR---- 178
EG+Q+HG+ L G+ + FV +NL+ Y G ++ AR +F M R
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 179 -SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+V WN ++ GY+ GD AR +FD+M R+VVSW TMI+G + G K A+ +F EM
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 238 RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
++ + G L+LG W+H Y + + + L +ALI MY+
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-----LGSALIDMYS 320
Query: 298 SCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
CG+I A VF ++P+ + ++W++MI FA G +A+ F M G VRP
Sbjct: 321 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG-----VRPSD 375
Query: 358 ITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
+ I +L AC H G V+EGRR F+ M G+ PRIEHYGCMVDLL R+G LDEA I
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 418 NMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRW 477
NMP+KP+D +W ALLG C++ N E+ V L+ + D +G V LSN+YA W
Sbjct: 436 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHD--SGAYVALSNMYASQGNW 493
Query: 478 QDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVD 537
+V +R +M E ++K PG S I I+GV+H+FV D +H + I +L EI + +
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Query: 538 SYEPDITGAFL 548
Y P T L
Sbjct: 554 GYRPITTQVLL 564
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 295/518 (56%), Gaps = 12/518 (2%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L +C+ + ++ +Q+HS + + I + L+ Y + A ++F + +
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ WN +I + ++ ++++ ++ M+ + EP+ T + ++SAC ++ G++VH
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 138 GIVLVKGYCSNVFVETN-LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
G V+ N + +N ++ YA +++AR +FD M R+V++ S+++GY
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
AR +F +M RNVVSW +IAG Q G ++ALSLF ++R V
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 257 XXXGDLKLGRWIHWYV-QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
+L LG H +V + ++ ++ + + N+LI MY CG + + Y VF KM +R
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
VSW +MI+ FA+ G G EAL LF+ M+ G +PD IT+I VL AC HAGFV+E
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGE-----KPDHITMIGVLSACGHAGFVEE 511
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
GR F+SM R +G++P +HY CMVDLL RAGFL+EA +IE MP++P+ +WG+LL C
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
++H+N L V KL+ E++ + Y VLLSN+YA +W+DV+ VR+ M + GV K
Sbjct: 572 KVHRNITLGKYVAEKLL-EVEPSNSGPY-VLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 629
Query: 496 PGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
PG SWI+I G H F+ D +H I+ +L +I +
Sbjct: 630 PGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAE 667
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 159/325 (48%), Gaps = 15/325 (4%)
Query: 103 RQMVSTEAEPNGFT----YSFLLSACVRGGLLR-EGEQVHGIVLVKGYCSNVFVETNLIN 157
+ + A+ + FT ++ LL +C++ L VH V+ G+ + +F++ LI+
Sbjct: 4 KSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLID 63
Query: 158 FYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTM 217
Y+ G +E R VFD M QR++ +WNS++ G G D A +F MP R+ +W +M
Sbjct: 64 AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
++G AQ RC++AL F M + D+ G +H ++
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH-----SLI 178
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEAL 337
A++ V + +AL+ MY+ CG + DA +VF +M R+ VSW S+I F + G EAL
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG 397
+F+ M+ V PD +TL V+ AC + G+ + + + + I
Sbjct: 239 DVFQMMLE-----SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSN 293
Query: 398 CMVDLLSRAGFLDEAHGLIENMPLK 422
VD+ ++ + EA + ++MP++
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 153/347 (44%), Gaps = 48/347 (13%)
Query: 5 RFVPASGRRS-------IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSF 57
R+V AS +S IQ + C ++++ Q+ ++ + +++T L
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFT 116
L A LF ++ WN ++ G+A+ H + CY M+ E N ++
Sbjct: 100 GF----LDEADSLFRSMPERDQCTWNSMVSGFAQ-HDRCEEALCYFAMMHKEGFVLNEYS 154
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
++ +LSAC + +G QVH ++ + S+V++ + L++ Y+ G V A+ VFD MG
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
R+VVSWNS++ + Q G +AL +F
Sbjct: 215 DRNVVSWNSLITCF-------------------------------EQNGPAVEALDVFQM 243
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M +RVE +K+G+ +H R+V ++ + + L+NA + MY
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVH----GRVVKNDKLRNDIILSNAFVDMY 299
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
A C I +A +F MP R+ ++ TSMI +A K A +F M
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/537 (37%), Positives = 299/537 (55%), Gaps = 17/537 (3%)
Query: 2 LIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS 61
+I+R S + V +L NN++ L Q H +++ GL++ + K + +
Sbjct: 1 MIQRINALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNA 60
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWK---SVECYRQMVSTEAEPNGFTYS 118
L++A+ +F+ P+T + N +IR + P ++ YR++ + A+P+ FT+
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 119 FLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
F+L VR + G Q+HG V+V G+ S+V V T LI Y GG+ AR +FD M +
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK 180
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMP--IRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
V WN++LAGY G+ D AR + + MP +RN VSWT +I+G A+ GR +A+ +F
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M VE G L+LG I YV R + R +V LNNA+I MY
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNR-----AVSLNNAVIDMY 295
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
A G I A VF + +R+ V+WT++I A G G EAL +F MV G VRP+
Sbjct: 296 AKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG-----VRPN 350
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
+T I +L AC H G+VD G+R+F SM +GI P IEHYGCM+DLL RAG L EA +I
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKR 476
++MP K N A+WG+LL +H + EL +L+ +L+ + + Y+ LL+N+Y+ R
Sbjct: 411 KSMPFKANAAIWGSLLAASNVHHDLELGERALSELI-KLEPNNSGNYM-LLANLYSNLGR 468
Query: 477 WQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
W + +R M +GVKK G+S I++ V+ F++GD+TH I+EIL E+ Q
Sbjct: 469 WDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQ 525
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 297/540 (55%), Gaps = 50/540 (9%)
Query: 17 QHVFTLLQS--CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS----DQLQHAHKL 70
+ LLQ+ ++I L QIH+ + +G+S + K L FY+ S + +AHK+
Sbjct: 16 EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKV 75
Query: 71 FSTIDNP-STTVWNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRGG 128
FS I+ P + +WN +IRGYA + YR+M VS EP+ TY FL+ A
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
+R GE +H +V+ G+ S ++V+ +L++ YA
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA---------------------------- 167
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
+CGD A +VFD+MP +++V+W ++I G A+ G+ ++AL+L+ EM ++
Sbjct: 168 ---NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G L LG+ +H Y+ + + RN +N L+ +YA CG + +A +
Sbjct: 225 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS-----SNVLLDLYARCGRVEEAKTL 279
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F +M +++VSWTS+I+ A G GKEA+ LFK M S +G+ P IT + +L AC
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES----TEGLLPCEITFVGILYACS 335
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
H G V EG F M + I PRIEH+GCMVDLL+RAG + +A+ I++MP++PN +W
Sbjct: 336 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 395
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
LLG C +H +S+LA +++ +L+ + + Y VLLSN+YA +RW DV +R++M+
Sbjct: 396 RTLLGACTVHGDSDLAEFARIQIL-QLEPNHSGDY-VLLSNMYASEQRWSDVQKIRKQML 453
Query: 489 EMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
GVKK PG S +++ VH+F+ GD +H S IY L E+ + + Y P I+ ++
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 281/512 (54%), Gaps = 15/512 (2%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H V + + + L+ Y + L A K+F+TI WN +I G+ + +
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
P K++E +++M S + + + T +LSAC + L G QV + N+ +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
+++ Y G +E A+ +FD M ++ V+W ++L GY D++ AR V + MP +++V+W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 215 TTMIAGCAQKGRCKQALSLFGEMR-RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
+I+ Q G+ +AL +F E++ + ++ G L+LGRWIH Y++
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + N + +ALIHMY+ CG + + +VF + +R W++MI A G G
Sbjct: 393 KHGIRMN-----FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
EA+ +F M V+P+ +T V CAC H G VDE +F M +GI P
Sbjct: 448 NEAVDMFYKMQE-----ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
+HY C+VD+L R+G+L++A IE MP+ P+ ++WGALLG C+IH N LA + +L+
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 454 -ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
E DGA VLLSNIYA +W++V +R+ M G+KK PG S I+I+G++H+F++
Sbjct: 563 LEPRNDGAH---VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 619
Query: 513 GDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
GD H S +Y L E++++ + YEP+I+
Sbjct: 620 GDNAHPMSEKVYGKLHEVMEKLKSNGYEPEIS 651
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 204/453 (45%), Gaps = 78/453 (17%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFSTIDNPS 78
+L++ C +++ L Q H ++ G +KL + S L++A K+F I P+
Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN 94
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ WN +IR YA P S+ + MVS ++ PN +T+ FL+ A L G+ +H
Sbjct: 95 SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G+ + S+VFV +LI+ Y G ++ A VF + ++ VVSWNS++ G+V G D
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 198 GARRVFDEMPIRNV-VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
A +F +M +V S TM+ LS ++R
Sbjct: 215 KALELFKKMESEDVKASHVTMVG----------VLSACAKIR------------------ 246
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF------- 309
+L+ GR + Y+++ V N + L NA++ MY CG I DA ++F
Sbjct: 247 ----NLEFGRQVCSYIEENRVNVN-----LTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 310 ------------------------TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVS 345
MPQ+ V+W ++I A+ + G EAL +F +
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 346 DGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSR 405
++ + ITL+ L AC G ++ GR I + + + GI ++ + S+
Sbjct: 358 Q----KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH-GIRMNFHVTSALIHMYSK 412
Query: 406 AGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
G L+++ + ++ K + +W A++GG +H
Sbjct: 413 CGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 39/256 (15%)
Query: 22 LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+L +C I+NL Q+ S + N ++ + +L Y ++ A +LF ++
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 79 TTVWNHIIRGYARSHT-----------PWKSVECYRQMVST---EAEPNGFTYSF----- 119
W ++ GYA S P K + + ++S +PN F
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 120 -------------LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVE 166
LSAC + G L G +H + G N V + LI+ Y+ G +E
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 167 QARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCA 222
++R VF+ + +R V W++++ G G + A +F +M NV V++T + C+
Sbjct: 418 KSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 223 QKGRCKQALSLFGEMR 238
G +A SLF +M
Sbjct: 478 HTGLVDEAESLFHQME 493
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 329 bits (843), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 202/568 (35%), Positives = 292/568 (51%), Gaps = 50/568 (8%)
Query: 17 QHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIA---SDQLQHAHKLFST 73
H +LL SC N++ L QIH + G+ + KL+ + A SD L +A +L
Sbjct: 6 HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLC 64
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE-AEPNGFTYSFLLSACVRGGLLRE 132
P ++N ++RGY+ S P SV + +M+ P+ F+++F++ A LR
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI------ 186
G Q+H L G S++FV T LI Y G G VE AR VFD M Q ++V+WN++
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 187 -------------------------LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGC 221
LAGY+ G+ + A+R+F EMP R+ VSW+TMI G
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 222 AQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQ 281
A G ++ F E++RA + G + G+ +H +V+ +
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVE-----KAG 299
Query: 282 QQPSVRLNNALIHMYASCGVIGDAYQVFTKM-PQRSTVSWTSMIMAFAKQGLGKEALGLF 340
V +NNALI MY+ CG + A VF M +R VSWTSMI A G G+EA+ LF
Sbjct: 300 YSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLF 359
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
M + G V PD I+ I +L AC HAG ++EG F+ M R + I P IEHYGCMV
Sbjct: 360 NEMTAYG-----VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMV 414
Query: 401 DLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGA 460
DL R+G L +A+ I MP+ P +W LLG C H N ELA V+ +L ELD +
Sbjct: 415 DLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL-NELDPNN- 472
Query: 461 AGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHS 520
+G LVLLSN YA A +W+DV ++R+ MI +KK S +++ ++ F AG+
Sbjct: 473 SGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGID 532
Query: 521 YFIYEILSEIIKQSHVDS-YEPDITGAF 547
+E L EII + ++ Y P++ A
Sbjct: 533 IEAHEKLKEIILRLKDEAGYTPEVASAL 560
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 181/528 (34%), Positives = 297/528 (56%), Gaps = 16/528 (3%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQ--LQHAHKLFSTIDNPS 78
LL S + + QIH+++ ++G + +++ + SD L +A+++ + P+
Sbjct: 11 ALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPT 70
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVST--EAEPNGFTYSFLLSACVRGGLLREGEQV 136
N +IR + +S P KS + YR+++S+ + +P+ +T +FL+ AC + G QV
Sbjct: 71 LFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQV 130
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG+ + +G+ ++ V+T LI+ YA G ++ VF+ + V +++ CGD
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
AR++F+ MP R+ ++W MI+G AQ G ++AL++F M+ V+
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
G L GRW H Y++ RN+ + +VRL L+ +YA CG + A +VF M +++
Sbjct: 251 TQLGALDQGRWAHSYIE-----RNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
+W+S + A G G++ L LF M DG V P+A+T + VL C GFVDEG
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDG-----VTPNAVTFVSVLRGCSVVGFVDEG 360
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
+R F SM +GI P++EHYGC+VDL +RAG L++A +I+ MP+KP+ A+W +LL +
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASR 420
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
++KN EL + K++ EL+T Y VLLSNIYA + W +V VRQ M GV+K P
Sbjct: 421 MYKNLELGVLASKKML-ELETANHGAY-VLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 497 GQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
G S +++NG VH+F GD +H I + +I ++ + Y+ D T
Sbjct: 479 GCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTT 526
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/511 (35%), Positives = 271/511 (53%), Gaps = 12/511 (2%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++H VV GL + L+ Y + A +F WN +I GY R
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+S+E +M P T +LSAC + ++VH V ++ +E
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
L+N YA G ++ A +F M R V+SW SI+ GYV G+ AR FD+MP+R+ +S
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRIS 335
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT MI G + G ++L +F EM+ A + G L++G WI Y+
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+N+ + V + NALI MY CG A +VF M QR +WT+M++ A G G
Sbjct: 396 -----KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+EA+ +F M ++PD IT + VL AC H+G VD+ R+ FA M I P +
Sbjct: 451 QEAIKVFFQMQDMS-----IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSL 505
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
HYGCMVD+L RAG + EA+ ++ MP+ PN +WGALLG ++H + +A + K++
Sbjct: 506 VHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL- 564
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
EL+ D A Y LL NIYA KRW+D+ VR+K++++ +KK PG S I++NG H+FVAG
Sbjct: 565 ELEPDNGAVY-ALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAG 623
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
D +H S IY L E+ ++S +Y PD +
Sbjct: 624 DKSHLQSEEIYMKLEELAQESTFAAYLPDTS 654
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 203/453 (44%), Gaps = 87/453 (19%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIA--SDQLQHAHKLFSTIDNPS 78
++L C Q+HSQ + G++ KL F+ + + +A+KLF I P
Sbjct: 39 SILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPD 98
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR-GGLLREGEQVH 137
VWN++I+G+++ + V Y M+ P+ T+ FLL+ R GG L G+++H
Sbjct: 99 VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLH 158
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
V+ G SN++V+ L+ Y+ G ++ AR VFD + V SWN +++GY +++
Sbjct: 159 CHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYE 218
Query: 198 GARRVFDEMPIRNVVSWTT-----MIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
+ + EM RN+VS T+ +++ C++
Sbjct: 219 ESIELLVEME-RNLVSPTSVTLLLVLSACSK----------------------------- 248
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV---- 308
D L + +H YV + + +PS+RL NAL++ YA+CG + A ++
Sbjct: 249 ------VKDKDLCKRVHEYVSE-----CKTEPSLRLENALVNAYAACGEMDIAVRIFRSM 297
Query: 309 ---------------------------FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFK 341
F +MP R +SWT MI + + G E+L +F+
Sbjct: 298 KARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFR 357
Query: 342 TMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVD 401
M S G+ PD T++ VL AC H G ++ G I +++ I + ++D
Sbjct: 358 EMQS-----AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN-KIKNDVVVGNALID 411
Query: 402 LLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ + G ++A + +M + + W A++ G
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQR-DKFTWTAMVVG 443
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 297/589 (50%), Gaps = 79/589 (13%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK 69
S RR ++ + L C N+ + Q+H+Q++ L + +I KL+S Q A +
Sbjct: 14 SSRRIFEERLQDL-PKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVR 72
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
+F+ + P+ + N +IR +A++ P+++ + +M + FTY FLL AC
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW 132
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGV------------------------ 165
L + +H + G S+++V LI+ Y+ GG+
Sbjct: 133 LPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSML 192
Query: 166 ---------EQARHVFDGMGQRSVVSWNSILAGYVSC----------------------- 193
AR +FD M QR ++SWN++L GY C
Sbjct: 193 GGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWST 252
Query: 194 --------GDFDGARRVFDEMPI--RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
GD + AR +FD+MP+ +NVV+WT +IAG A+KG K+A L +M + ++
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
G L LG IH I+ R+ + + NAL+ MYA CG +
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIH-----SILKRSNLGSNAYVLNALLDMYAKCGNLK 367
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
A+ VF +P++ VSW +M+ G GKEA+ LF M +G +RPD +T I V
Sbjct: 368 KAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREG-----IRPDKVTFIAV 422
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
LC+C HAG +DEG F SM + + + P++EHYGC+VDLL R G L EA +++ MP++P
Sbjct: 423 LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEP 482
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAV 483
N +WGALLG C++H ++A V LV +LD Y LLSNIYA A+ W+ V +
Sbjct: 483 NVVIWGALLGACRMHNEVDIAKEVLDNLV-KLDPCDPGNY-SLLSNIYAAAEDWEGVADI 540
Query: 484 RQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIK 532
R KM MGV+KP G S +++ +H+F D +H S IY++L +I+
Sbjct: 541 RSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 190/537 (35%), Positives = 286/537 (53%), Gaps = 20/537 (3%)
Query: 20 FTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLL-------SFYIASDQLQHAHKLFS 72
LLQSC++ +L IH ++ L + ++LL +F ++ L +A+ +FS
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
I NP+ V+N +IR ++ P K+ Y QM+ + P+ T+ FL+ A +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
GEQ H ++ G+ ++V+VE +L++ YA G + A +F MG R VVSW S++AGY
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
CG + AR +FDEMP RN+ +W+ MI G A+ ++A+ LF M+R V
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G L+ G + Y V ++ ++ L AL+ M+ CG I A VF +
Sbjct: 256 ISSCAHLGALEFGERAYEY-----VVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
P+ ++SW+S+I A G +A+ F M+S G P +T VL AC H G
Sbjct: 311 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMIS-----LGFIPRDVTFTAVLSACSHGGL 365
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
V++G I+ +M + GI PR+EHYGC+VD+L RAG L EA I M +KPN + GALL
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
G C+I+KN+E+A V L+ +GY VLLSNIYA A +W + ++R M E V
Sbjct: 426 GACKIYKNTEVAERVGNMLIKV--KPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLV 483
Query: 493 KKPPGQSWIQINGVVHDFVAG-DMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
KKPPG S I+I+G ++ F G D H I EI+ + + Y+ + AF
Sbjct: 484 KKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFF 540
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 277/505 (54%), Gaps = 13/505 (2%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKL 70
G R ++ + LQ + +I++ ++++GLSQ + ++TK++ F + + +A +L
Sbjct: 5 GIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRL 64
Query: 71 FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE-PNGFTYSFLLSACVRGGL 129
F+ + NP+ ++N IIR Y + + Y+Q++ E P+ FT+ F+ +C G
Sbjct: 65 FNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGS 124
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
G+QVHG + G +V E LI+ Y + A VFD M +R V+SWNS+L+G
Sbjct: 125 CYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSG 184
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y G A+ +F M + +VSWT MI+G G +A+ F EM+ A +E
Sbjct: 185 YARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISL 244
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G L+LG+WIH Y ++R + + NALI MY+ CGVI A Q+F
Sbjct: 245 ISVLPSCAQLGSLELGKWIHLYAERRGFLKQ-----TGVCNALIEMYSKCGVISQAIQLF 299
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+M + +SW++MI +A G A+ F M V+P+ IT + +L AC H
Sbjct: 300 GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAK-----VKPNGITFLGLLSACSH 354
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G EG R F M + + I P+IEHYGC++D+L+RAG L+ A + + MP+KP+ +WG
Sbjct: 355 VGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWG 414
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
+LL C+ N ++A V LV EL+ + Y VLL+NIYA +W+DV +R+ +
Sbjct: 415 SLLSSCRTPGNLDVALVAMDHLV-ELEPEDMGNY-VLLANIYADLGKWEDVSRLRKMIRN 472
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGD 514
+KK PG S I++N +V +FV+GD
Sbjct: 473 ENMKKTPGGSLIEVNNIVQEFVSGD 497
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 171/536 (31%), Positives = 286/536 (53%), Gaps = 16/536 (2%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
R S ++ + ++L+SC NI ++ IH++++ Q ++ +L+ D + +A+ +F
Sbjct: 25 RLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVF 84
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
S + NP+ ++ +I G+ S V Y +M+ P+ + + +L AC L+
Sbjct: 85 SYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LK 140
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
++H VL G+ S+ V ++ Y G + A+ +FD M R V+ ++ Y
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 192 SCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
CG A +F ++ I++ V WT MI G + +AL LF EM+ V
Sbjct: 201 ECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
G L+LGRW+H +V+ + + + S + NALI+MY+ CG I +A +VF
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQ-----RMELSNFVGNALINMYSRCGDINEARRVFRV 315
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
M + +S+ +MI A G EA+ F+ MV+ G RP+ +TL+ +L AC H G
Sbjct: 316 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG-----FRPNQVTLVALLNACSHGG 370
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
+D G +F SM R + + P+IEHYGC+VDLL R G L+EA+ IEN+P++P+ + G L
Sbjct: 371 LLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTL 430
Query: 432 LGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMG 491
L C+IH N EL + +L + D +G VLLSN+YA + +W++ +R+ M + G
Sbjct: 431 LSACKIHGNMELGEKIAKRLFESENPD--SGTYVLLSNLYASSGKWKESTEIRESMRDSG 488
Query: 492 VKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
++K PG S I+++ +H+F+ GD+ H H IY+ L E+ + + DI F
Sbjct: 489 IEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKENQIDIIMGF 544
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/528 (34%), Positives = 284/528 (53%), Gaps = 18/528 (3%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFY--IASDQLQHAHKLFSTIDNPSTT 80
L C N+ + QIH V+ GL Q I+TKL+ + +A ++ + +
Sbjct: 56 LDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
+W +IRGYA +++ Y M E P FT+S LL AC L G Q H
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 141 L-VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
++G+C V+V +I+ Y ++ AR VFD M +R V+SW ++A Y G+ + A
Sbjct: 176 FRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECA 234
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
+F+ +P +++V+WT M+ G AQ + ++AL F M ++ +
Sbjct: 235 AELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQL 294
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPS--VRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G ++ VQ I ++ PS V + +ALI MY+ CG + +A VF M ++
Sbjct: 295 G---ASKYADRAVQ--IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNV 349
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+++SMI+ A G +EAL LF MV+ ++P+ +T + L AC H+G VD+GR
Sbjct: 350 FTYSSMILGLATHGRAQEALHLFHYMVTQTE----IKPNTVTFVGALMACSHSGLVDQGR 405
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
++F SM +T+G+ P +HY CMVDLL R G L EA LI+ M ++P+ +WGALLG C+I
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRI 465
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H N E+A + L EL+ D Y +LLSN+YA A W V+ VR+ + E G+KK P
Sbjct: 466 HNNPEIAEIAAEHLF-ELEPDIIGNY-ILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPA 523
Query: 498 QSW-IQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
SW + NG +H F G++ H S I + L E++++ V Y+PD++
Sbjct: 524 VSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLS 571
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 287/576 (49%), Gaps = 52/576 (9%)
Query: 12 RRSIQQHVFTL---LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH 68
++S Q+ VF L L + +I+ L +HS+++L L +++ KL+ Y + + A
Sbjct: 35 QKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASAR 94
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
K+F I + + N +IR Y + + V+ + M P+ +T+ +L AC G
Sbjct: 95 KVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
+ G ++HG G S +FV L++ Y G + +AR V D M +R VVSWNS++
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 189 GYVSCGDFDGARRV-------------------------------------FDEMPIRNV 211
GY FD A V F +M +++
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL 274
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
VSW MI + +A+ L+ M E L LG+ IH Y
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
++ R + P++ L NALI MYA CG + A VF M R VSWT+MI A+ G
Sbjct: 335 IE-----RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
G +A+ LF + G + PD+I + L AC HAG ++EGR F M + I+P
Sbjct: 390 RGCDAVALFSKLQDSG-----LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKL 451
R+EH CMVDLL RAG + EA+ I++M ++PN+ +WGALLG C++H ++++ + KL
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 452 VAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFV 511
+L + +GY VLLSNIYA A RW++V +R M G+KK PG S +++N ++H F+
Sbjct: 505 F-QLAPE-QSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFL 562
Query: 512 AGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
GD +H S IY L ++K+ Y PD A
Sbjct: 563 VGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESAL 598
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 36/296 (12%)
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
D++ R +H RI+ + + S L L+ YAS + A +VF ++P+R+ +
Sbjct: 54 DIRTLRTVH----SRIILEDLRCNS-SLGVKLMRAYASLKDVASARKVFDEIPERNVIII 108
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
MI ++ G E + +F TM G + VRPD T VL AC +G + GR+I
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTM----CGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIH 163
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL-LGGCQIHK 439
S + G+S + +V + + GFL EA +++ M + + W +L +G Q +
Sbjct: 164 GSATKV-GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVVGYAQNQR 221
Query: 440 NSELASVVEPKLVAELDTDGA--AGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
+ V ++ D A L +SN ++V+ V+ +MG K
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTT-----ENVMYVKDMFFKMG--KKSL 274
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD---ITGAFLGC 550
SW + GV K++ + + E+ + D +EPD IT C
Sbjct: 275 VSWNVMIGVY---------MKNAMPVEAV--ELYSRMEADGFEPDAVSITSVLPAC 319
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 314 bits (805), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 184/512 (35%), Positives = 272/512 (53%), Gaps = 20/512 (3%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI--ASDQLQHAHKLFSTIDNPST 79
L C ++ L +IH+ ++ GLS++ +++ LSF +S + +A+K S + +P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN 73
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
WN +IRG++ S P KS+ Y QM+ P+ TY FL+ + R + G +H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
V+ G ++F+ LI+ Y AR +FD M +++V+WNSIL Y GD A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE-MRRARVEXXXXXXXXXXXXXXX 258
R VFDEM R+VV+W++MI G ++G +AL +F + MR +
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQP-SVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G L G+ +H Y+ + P +V L +LI MYA CG IGDA+ VF + + T
Sbjct: 254 LGALNRGKTVHRYIL------DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKET 307
Query: 318 --VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ W ++I A G +E+L LF M + PD IT + +L AC H G V E
Sbjct: 308 DALMWNAIIGGLASHGFIRESLQLFHKMRE-----SKIDPDEITFLCLLAACSHGGLVKE 362
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
F S+ + G P+ EHY CMVD+LSRAG + +AH I MP+KP ++ GALL GC
Sbjct: 363 AWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGC 421
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
H N ELA V KL+ EL Y V L+N+YA K+++ ++R+ M + GVKK
Sbjct: 422 INHGNLELAETVGKKLI-ELQPHNDGRY-VGLANVYAINKQFRAARSMREAMEKKGVKKI 479
Query: 496 PGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
G S + ++G H F+A D TH HS IY +L
Sbjct: 480 AGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 311 bits (798), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 281/524 (53%), Gaps = 15/524 (2%)
Query: 7 VPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS-DQLQ 65
+P+SG S ++ + C+ ++ L QIH+ ++ GL T +++L+F AS +
Sbjct: 16 MPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN 75
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV--STEAEPNGFTYSFLLSA 123
+A+ +F+ I++ + VWN IIRG++RS P ++ + M+ S +P TY + A
Sbjct: 76 YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
R G R+G Q+HG+V+ +G + F+ +++ Y G + +A +F GM VV+W
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
NS++ G+ CG D A+ +FDEMP RN VSW +MI+G + GR K AL +F EM+ V+
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
G + GRWIH Y + RN+ + + + ALI MY CG I
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEY-----IVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
+ VF P++ W SMI+ A G + A+ LF + G+ PD+++ I V
Sbjct: 311 EGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELER-----SGLEPDSVSFIGV 365
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L AC H+G V F M + I P I+HY MV++L AG L+EA LI+NMP++
Sbjct: 366 LTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEE 425
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAV 483
+ +W +LL C+ N E+A K + +LD D GY VLLSN YA +++ +
Sbjct: 426 DTVIWSSLLSACRKIGNVEMAKRA-AKCLKKLDPDETCGY-VLLSNAYASYGLFEEAVEQ 483
Query: 484 RQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
R M E ++K G S I+++ VH+F++ TH S IY +L
Sbjct: 484 RLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLL 527
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 261/492 (53%), Gaps = 14/492 (2%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T + Y + ++ +A +F + + WN +I Y R ++ + + +M +
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
P+ ++SAC R G +R ++ ++ + + T L+ YAG G ++ AR
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
F M R++ ++++GY CG D A+ +FD+ +++V WTTMI+ + ++AL
Sbjct: 270 FRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
+F EM + ++ G L +W+H + N + + +NNA
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV-----NGLESELSINNA 384
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
LI+MYA CG + VF KMP+R+ VSW+SMI A + G +AL LF M +
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN---- 440
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
V P+ +T + VL C H+G V+EG++IFASM + I+P++EHYGCMVDL RA L E
Sbjct: 441 -VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLRE 499
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA-ELDTDGAAGYLVLLSNI 470
A +IE+MP+ N +WG+L+ C+IH EL +++ E D DGA LVL+SNI
Sbjct: 500 ALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGA---LVLMSNI 556
Query: 471 YAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
YA +RW+DV +R+ M E V K G S I NG H+F+ GD HK S IY L E+
Sbjct: 557 YAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEV 616
Query: 531 IKQSHVDSYEPD 542
+ + + Y PD
Sbjct: 617 VSKLKLAGYVPD 628
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 205/425 (48%), Gaps = 21/425 (4%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP- 77
+ L C ++ ++ Q+H+ ++ ++ K N LS +S L +A +FS+I +P
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPP 74
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ V+N +R +RS P ++ Y+++ + F++ +L A + L EG ++H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G+ + FVET ++ YA G + AR+VFD M R VV+WN+++ Y G D
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 198 GARRVFDEMPIRNVVS----WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
A ++F+EM NV+ +++ C + G + +++ + V
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
G + + R +++ RN + ++ A++ Y+ CG + DA +F +
Sbjct: 255 TMYAGAGCMDMAREFF----RKMSVRN-----LFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
++ V WT+MI A+ + +EAL +F+ M G++PD +++ V+ AC + G +
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMC-----CSGIKPDVVSMFSVISACANLGIL 360
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
D+ + + + ++ G+ + ++++ ++ G LD + E MP + N W +++
Sbjct: 361 DKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMIN 418
Query: 434 GCQIH 438
+H
Sbjct: 419 ALSMH 423
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 4/192 (2%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
+ T ++S Y +L A +F + W +I Y S P +++ + +M +
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQAR 169
+P+ + ++SAC G+L + + VH + V G S + + LIN YA GG++ R
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 170 HVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKG 225
VF+ M +R+VVSW+S++ G+ A +F M NV V++ ++ GC+ G
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
Query: 226 RCKQALSLFGEM 237
++ +F M
Sbjct: 460 LVEEGKKIFASM 471
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 19 VFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+F+++ +C N+ L + +HS + +NGL + +I L++ Y L +F +
Sbjct: 347 MFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ W+ +I + ++ + +M EPN T+ +L C GL+ EG++
Sbjct: 407 RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 136 VHGIVLVKGYCSNVFVETN--LINFYAGRGGVEQARHVFDGMGQRS-VVSWNSILA---- 188
+ + Y +E +++ + + +A V + M S VV W S+++
Sbjct: 467 IFA-SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRI 525
Query: 189 -GYVSCGDFDGARRVFDEMP 207
G + G F A+R+ + P
Sbjct: 526 HGELELGKF-AAKRILELEP 544
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 284/535 (53%), Gaps = 20/535 (3%)
Query: 14 SIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
S+ + ++ C + +L+ +V L + T +++ Y+ + +L
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 74 ID-NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
+D N +N +I GY +++E R+MVS+ E + FTY ++ AC GLL+
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G+QVH VL + S F + +L++ Y G ++AR +F+ M + +VSWN++L+GYVS
Sbjct: 305 GKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS 363
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
G A+ +F EM +N++SW MI+G A+ G ++ L LF M+R E
Sbjct: 364 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G G+ H Q + + S+ NALI MYA CGV+ +A QVF M
Sbjct: 424 IKSCAVLGAYCNGQQYH--AQLLKIGFDS---SLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
P +VSW ++I A + G G EA+ +++ M+ G +RPD ITL+ VL AC HAG
Sbjct: 479 PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG-----IRPDRITLLTVLTACSHAGL 533
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
VD+GR+ F SM + I P +HY ++DLL R+G +A +IE++P KP +W ALL
Sbjct: 534 VDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALL 593
Query: 433 GGCQIHKNSELASVVEPK---LVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
GC++H N EL + K L+ E D G +LLSN++A +W++V VR+ M +
Sbjct: 594 SGCRVHGNMELGIIAADKLFGLIPEHD-----GTYMLLSNMHAATGQWEEVARVRKLMRD 648
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
GVKK SWI++ VH F+ D +H + +Y L ++ K+ Y PD +
Sbjct: 649 RGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTS 703
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 171/399 (42%), Gaps = 61/399 (15%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP----------------- 77
+H ++ G + +I+ +L+ Y S +L +A +LF I P
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 78 ----------------STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
T ++N +I G++ ++ + ++ + +M +P+ FT++ +L
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 122 SACVRGGLLREGE----QVHGIVLVKGYCSNVFVETNLINFYAGRGG----VEQARHVFD 173
+ L+ + E Q H L G V L++ Y+ + AR VFD
Sbjct: 156 AGL---ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-NVVSWTTMIAGCAQKGRCKQALS 232
+ ++ SW +++ GYV G FD + + M +V++ MI+G +G ++AL
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
+ M + +E G L+LG+ +H YV +R + S +N+L
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR------EDFSFHFDNSL 326
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
+ +Y CG +A +F KMP + VSW +++ + G EA +FK M
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM--------- 377
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
+ ++ ++++ GF +EG ++F+ M R G P
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEP 415
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 150/361 (41%), Gaps = 52/361 (14%)
Query: 113 NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVF 172
N + + L +R L+ VHG ++ G+ + LI+ Y + AR +F
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72
Query: 173 DGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI--RNVVSWTTMIAGCAQKGRCKQA 230
D + + ++ ++++GY + GD AR VF++ P+ R+ V + MI G + A
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV-RLN 289
++LF +M+ + D + VQ A + ++
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGLALVADDE-----KQCVQFHAAALKSGAGYITSVS 187
Query: 290 NALIHMYASCG----VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG---LG--------- 333
NAL+ +Y+ C ++ A +VF ++ ++ SWT+M+ + K G LG
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 334 --------------------KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+EAL + + MVS G+ D T V+ AC AG +
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVS-----SGIELDEFTYPSVIRACATAGLL 302
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
G+++ A + R S ++ +V L + G DEA + E MP K + W ALL
Sbjct: 303 QLGKQVHAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLS 359
Query: 434 G 434
G
Sbjct: 360 G 360
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 308 bits (789), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 276/531 (51%), Gaps = 47/531 (8%)
Query: 17 QHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS---DQLQHAHKLFST 73
Q+ L+ CN+++ L+QI + + + + + + + KL++F S + +A LF
Sbjct: 30 QNPILLISKCNSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLFEA 88
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+ P ++N + RGY+R P + + +++ P+ +T+ LL AC L EG
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
Q+H + + G NV+V LIN Y C
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYT-------------------------------EC 177
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
D D AR VFD + VV + MI G A++ R +ALSLF EM+ ++
Sbjct: 178 EDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVL 237
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
G L LG+WIH Y ++ + V++N ALI M+A CG + DA +F KM
Sbjct: 238 SSCALLGSLDLGKWIHKYAKKHSFCK-----YVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+ T +W++MI+A+A G ++++ +F+ M S+ V+PD IT + +L AC H G V
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN-----VQPDEITFLGLLNACSHTGRV 347
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
+EGR+ F+ M +GI P I+HYG MVDLLSRAG L++A+ I+ +P+ P LW LL
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLA 407
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
C H N +LA V ++ ELD D G V+LSN+YA K+W+ V ++R+ M +
Sbjct: 408 ACSSHNNLDLAEKVSERIF-ELD-DSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAV 465
Query: 494 KPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
K PG S I++N VVH+F +GD + ++ L E++K+ + Y PD +
Sbjct: 466 KVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTS 516
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 271/512 (52%), Gaps = 19/512 (3%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H+ + G+ + +++ +LL L +A KLF N T ++N +I+ Y H
Sbjct: 6 QLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVHH 61
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P +S+ Y + P+ T++F+ +A R +H G+ S+ F T
Sbjct: 62 QPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCT 121
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
LI YA G + AR VFD M +R V WN+++ GY GD A +FD MP +NV S
Sbjct: 122 TLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTS 181
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRAR-VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
WTT+I+G +Q G +AL +F M + + V+ G+L++GR + Y
Sbjct: 182 WTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYA 241
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM-PQRSTVSWTSMIMAFAKQG 331
++ N + + NA I MY+ CG+I A ++F ++ QR+ SW SMI + A G
Sbjct: 242 RENGFFDN-----IYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
EAL LF M+ +G +PDA+T + +L AC H G V +G+ +F SM ISP
Sbjct: 297 KHDEALTLFAQMLREGE-----KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISP 351
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKL 451
++EHYGCM+DLL R G L EA+ LI+ MP+KP+ +WG LLG C H N E+A + L
Sbjct: 352 KLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEAL 411
Query: 452 VAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGV-VHDF 510
T+ G V++SNIYA ++W V+ +R+ M + + K G S+ GV VH F
Sbjct: 412 FKLEPTN--PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKF 469
Query: 511 VAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
D +H SY IY++L EI ++ ++ D
Sbjct: 470 TVEDKSHPRSYEIYQVLEEIFRRMKLEKSRFD 501
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 286/547 (52%), Gaps = 54/547 (9%)
Query: 16 QQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIIT---KLLSFYIASDQLQHAHKLFS 72
Q +F+L ++C+++ L Q+H+ + ++ + K+L + + +A ++F
Sbjct: 48 HQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 73 TIDNPSTTVWNHIIRGYARSHT-PWKSVECYRQMVST-EAEPNGFTYSFLLSACVRGGLL 130
+I+N S+ +WN +IR A + ++ YR+M+ E+ P+ T+ F+L AC
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
EG+QVH ++ G+ +V+V LI+ Y
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYG------------------------------ 197
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
SCG D AR+VFDEMP R++VSW +MI + G AL LF EM+R+ E
Sbjct: 198 -SCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQ 255
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRI---VARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
G L LG W H ++ ++ VA + V + N+LI MY CG + A Q
Sbjct: 256 SVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD-----VLVKNSLIEMYCKCGSLRMAEQ 310
Query: 308 VFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
VF M +R SW +MI+ FA G +EA+ F MV + VRP+++T + +L AC
Sbjct: 311 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR---ENVRPNSVTFVGLLIAC 367
Query: 368 CHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL 427
H GFV++GR+ F M R + I P +EHYGC+VDL++RAG++ EA ++ +MP+KP+ +
Sbjct: 368 NHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVI 427
Query: 428 WGALLGGC-----QIHKNSELA-SVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVI 481
W +LL C + + E+A +++ K E +G VLLS +YA A RW DV
Sbjct: 428 WRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVG 487
Query: 482 AVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
VR+ M E G++K PG S I+ING+ H+F AGD +H + IY+ L I + Y P
Sbjct: 488 IVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLP 547
Query: 542 DITGAFL 548
D + A L
Sbjct: 548 DRSQAPL 554
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/525 (34%), Positives = 271/525 (51%), Gaps = 45/525 (8%)
Query: 13 RSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS----DQLQHAH 68
R+ + L Q+C NI+ L QIH+ +V+NGL +++ +L+ Y AS L++AH
Sbjct: 9 RTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAH 66
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
KLF I P ++ NH++RG A+S P K+V Y +M P+ +T++F+L AC +
Sbjct: 67 KLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLE 126
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINF------------------------------ 158
G HG V+ G+ N +V+ LI F
Sbjct: 127 WRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTS 186
Query: 159 -YAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTM 217
YA RG +++A +FD M + V+WN ++ G + C + D AR +FD ++VV+W M
Sbjct: 187 GYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAM 246
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
I+G G K+AL +F EMR A GDL+ G+ +H Y+ +
Sbjct: 247 ISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETAS 306
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEAL 337
+ + NALI MYA CG I A +VF + R +W ++I+ A + ++
Sbjct: 307 VSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSI 365
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG 397
+F+ M V P+ +T I V+ AC H+G VDEGR+ F+ M + I P I+HYG
Sbjct: 366 EMFEEMQRLK-----VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYG 420
Query: 398 CMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDT 457
CMVD+L RAG L+EA +E+M ++PN +W LLG C+I+ N EL KL++ +
Sbjct: 421 CMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS-MRK 479
Query: 458 DGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
D + Y VLLSNIYA +W V VR+ + VKKP G S I+
Sbjct: 480 DESGDY-VLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/525 (34%), Positives = 279/525 (53%), Gaps = 19/525 (3%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGL---SQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L+ ++ ++QIH+ ++ + L + + KL Y + +++H+ LF +P
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
++ I + + ++ Y Q++S+E PN FT+S LL +C + G+ +H
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHT 150
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
VL G + +V T L++ YA G V A+ VFD M +RS+VS +++ Y G+ +
Sbjct: 151 HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA 210
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXXX 257
AR +FD M R++VSW MI G AQ G AL LF ++ + +
Sbjct: 211 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 270
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G L+ GRWIH +V+ + N V++ LI MY+ CG + +A VF P++
Sbjct: 271 QIGALETGRWIHVFVKSSRIRLN-----VKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
V+W +MI +A G ++AL LF M G+ G++P IT I L AC HAG V+EG
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEM----QGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
RIF SM + +GI P+IEHYGC+V LL RAG L A+ I+NM + + LW ++LG C++
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKL 441
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H + L + L+ L+ +G VLLSNIYA ++ V VR M E G+ K PG
Sbjct: 442 HGDFVLGKEIAEYLIG-LNIKN-SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG 499
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
S I+I VH+F AGD H S IY +L +I ++ Y P+
Sbjct: 500 ISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPN 544
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/516 (30%), Positives = 275/516 (53%), Gaps = 45/516 (8%)
Query: 29 IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRG 88
++ L Q+H+ +++ G + +++TKL++ ++ + + H LF ++ P ++N +I+
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 89 YARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN 148
++ P V YR+M+S+ P+ +T++ ++ +C LR G+ VH +V G+ +
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
+V+ L+ FY+ CGD +GAR+VFD MP
Sbjct: 142 TYVQAALVTFYS-------------------------------KCGDMEGARQVFDRMPE 170
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
+++V+W ++++G Q G +A+ +F +MR + E G + LG W+
Sbjct: 171 KSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWV 230
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
H Y+ + N V+L ALI++Y+ CG +G A +VF KM + + +WT+MI A+
Sbjct: 231 HQYIISEGLDLN-----VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG 285
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWG 388
G G++A+ LF M D + P+ +T + VL AC HAG V+EGR ++ M +++
Sbjct: 286 THGYGQQAVELFNKMEDDCGPI----PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYR 341
Query: 389 ISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPN---DALWGALLGGCQIHKNSELAS 445
+ P +EH+ CMVD+L RAGFLDEA+ I + ALW A+LG C++H+N +L
Sbjct: 342 LIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGV 401
Query: 446 VVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQING 505
+ +L+A L+ D G+ V+LSNIYA + + +V +R M+ ++K G S I++
Sbjct: 402 EIAKRLIA-LEPDN-PGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVEN 459
Query: 506 VVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
+ F GD +H+ + IY L +I + Y P
Sbjct: 460 KTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAP 495
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 126/240 (52%), Gaps = 9/240 (3%)
Query: 10 SGRRSIQQHVFT-LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
S S + FT +++SC ++ L +H V++G T + L++FY ++
Sbjct: 100 SSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDME 159
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A ++F + S WN ++ G+ ++ ++++ + QM + EP+ T+ LLSAC
Sbjct: 160 GARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACA 219
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
+ G + G VH ++ +G NV + T LIN Y+ G V +AR VFD M + +V +W +
Sbjct: 220 QTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTA 279
Query: 186 ILAGYVSCGDFDGARRVFDEM-----PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
+++ Y + G A +F++M PI N V++ +++ CA G ++ S++ M ++
Sbjct: 280 MISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 301 bits (772), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 181/528 (34%), Positives = 273/528 (51%), Gaps = 47/528 (8%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS--DQLQHAHKLFSTID- 75
+ +LQ CN+++ L +IHS V++NGL +I LL F S L HA LF D
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECY-RQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
+PST+ WN++IRG++ S +P S+ Y R ++S+ + P+ FT++F L +C R + +
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
++HG V+ G+ + V T+L+ Y+ G VE A
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIAS------------------------- 162
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
+VFDEMP+R++VSW MI + G QALS++ M V
Sbjct: 163 ------KVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLS 216
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
L +G +H RI + + V ++NALI MYA CG + +A VF M +
Sbjct: 217 SCAHVSALNMGVMLH-----RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRK 271
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R ++W SMI+ + G G EA+ F+ MV+ G VRP+AIT + +L C H G V
Sbjct: 272 RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG-----VRPNAITFLGLLLGCSHQGLVK 326
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
EG F M+ + ++P ++HYGCMVDL RAG L+ + +I + LW LLG
Sbjct: 327 EGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGS 386
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C+IH+N EL V KLV +L+ A Y VL+++IY+ A Q ++R+ + ++
Sbjct: 387 CKIHRNLELGEVAMKKLV-QLEAFNAGDY-VLMTSIYSAANDAQAFASMRKLIRSHDLQT 444
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
PG SWI+I VH FV D H S IY L E+I ++ + Y+P+
Sbjct: 445 VPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPE 492
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 301 bits (770), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 260/483 (53%), Gaps = 32/483 (6%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
LL ++ ++ A + F +++ WN II GYA+S ++ RQ+ +
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS----GKIDEARQLFDESPVQD 280
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGG------VEQ 167
FT++ ++S ++ ++ E ++ + E N +++ A G +E
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELF----------DKMPERNEVSWNAMLAGYVQGERMEM 330
Query: 168 ARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRC 227
A+ +FD M R+V +WN+++ GY CG A+ +FD+MP R+ VSW MIAG +Q G
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 228 KQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVR 287
+AL LF +M R L+LG+ +H R+V + +
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLH----GRLV-KGGYETGCF 445
Query: 288 LNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
+ NAL+ MY CG I +A +F +M + VSW +MI +++ G G+ AL F++M +G
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 348 AGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAG 407
++PD T++ VL AC H G VD+GR+ F +M + +G+ P +HY CMVDLL RAG
Sbjct: 506 -----LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
Query: 408 FLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLL 467
L++AH L++NMP +P+ A+WG LLG ++H N+ELA K+ A + +G VLL
Sbjct: 561 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN--SGMYVLL 618
Query: 468 SNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
SN+YA + RW DV +R +M + GVKK PG SWI+I H F GD H I+ L
Sbjct: 619 SNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL 678
Query: 528 SEI 530
E+
Sbjct: 679 EEL 681
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 176/433 (40%), Gaps = 64/433 (14%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
++S Y+ + + + A KLF + WN +I+GY R+ K+ E + M E +
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERD 156
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
+++ +LS + G + + V + K N L++ Y +E+A +F
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
++VSWN +L G+V AR+ FD M +R+VVSW T+I G AQ G+ +A L
Sbjct: 213 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 234 FGE----------------MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
F E ++ VE + L ++ +
Sbjct: 273 FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 332
Query: 278 ARNQQQP--SVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKE 335
P +V N +I YA CG I +A +F KMP+R VSW +MI +++ G E
Sbjct: 333 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 336 ALGLFKTMVSDGAGVD--------GVRPDAITLIV----------------------VLC 365
AL LF M +G ++ D + L + +L
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LK 422
C G ++E +F M I + M+ SR GF + A E+M LK
Sbjct: 453 MYCKCGSIEEANDLFKEM-----AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK 507
Query: 423 PNDALWGALLGGC 435
P+DA A+L C
Sbjct: 508 PDDATMVAVLSAC 520
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 170/412 (41%), Gaps = 54/412 (13%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFY----IASDQLQHAH-KLFSTIDNPSTTVWNHIIRG 88
Q+H LNGL ++ N +F+ Q+Q + K + WN I
Sbjct: 15 QLH-YTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISS 73
Query: 89 YARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN 148
Y R+ +++ +++M + +Y+ ++S G LR GE L
Sbjct: 74 YMRTGRCNEALRVFKRM----PRWSSVSYNGMIS-----GYLRNGEFELARKLFDEMPER 124
Query: 149 VFVETN-LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP 207
V N +I Y + +AR +F+ M +R V SWN++L+GY G D AR VFD MP
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
+N VSW +++ Q + ++A LF + LG +
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLF---------------KSRENWALVSWNCLLGGF 229
Query: 268 IHWYVQQRIVARNQQQPSVRLN-----NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTS 322
+ +++IV Q S+ + N +I YA G I +A Q+F + P + +WT+
Sbjct: 230 VK---KKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 286
Query: 323 MIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFAS 382
M+ + + + +EA LF M + ++ +L ++ + +F
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPE---------RNEVSWNAMLAGYVQGERMEMAKELFDV 337
Query: 383 MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
M + + M+ ++ G + EA L + MP K + W A++ G
Sbjct: 338 MP-----CRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 259/473 (54%), Gaps = 12/473 (2%)
Query: 55 LSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNG 114
+ + + +++A K+F WN +I GY + K++ Y+ M S +P+
Sbjct: 198 IHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDD 257
Query: 115 FTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
T L+S+C G L G++ + V G + + L++ ++ G + +AR +FD
Sbjct: 258 VTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN 317
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF 234
+ +R++VSW ++++GY CG D +R++FD+M ++VV W MI G Q R + AL+LF
Sbjct: 318 LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALF 377
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
EM+ + + G L +G WIH Y+++ ++ N V L +L+
Sbjct: 378 QEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLN-----VALGTSLVD 432
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MYA CG I +A VF + R+++++T++I A G A+ F M+ G+
Sbjct: 433 MYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMID-----AGIA 487
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
PD IT I +L ACCH G + GR F+ M + ++P+++HY MVDLL RAG L+EA
Sbjct: 488 PDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADR 547
Query: 415 LIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFA 474
L+E+MP++ + A+WGALL GC++H N EL KL+ ELD + Y VLL +Y A
Sbjct: 548 LMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLL-ELDPSDSGIY-VLLDGMYGEA 605
Query: 475 KRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
W+D R+ M E GV+K PG S I++NG+V +F+ D + S IY+ L
Sbjct: 606 NMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 209/470 (44%), Gaps = 87/470 (18%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQ--LQHAHKLFS 72
+ + +LL+ C + +L QI +Q+++NGL ++L++F S+ L ++ K+
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVS---TEAEPNGFTYSFLLSACVRGGL 129
I+NP+ WN IRG++ S P +S Y+QM+ E+ P+ FTY L C L
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
G + G VL V I+ +A G +E AR VFD R +VSWN ++ G
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 190 YVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
Y G+ + A V+ M V V+ +++ C+
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSM---------------------- 269
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
GDL G+ + YV++ N + ++ L NAL+ M++ CG I +A
Sbjct: 270 -------------LGDLNRGKEFYEYVKE-----NGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGL-------------------------------GK 334
++F + +R+ VSWT+MI +A+ GL G+
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
+AL LF+ M + +PD IT+I L AC G +D G I + + + +S +
Sbjct: 372 DALALFQEMQT-----SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVA 425
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
+VD+ ++ G + EA + + + N + A++GG +H ++ A
Sbjct: 426 LGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTA 474
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 163/380 (42%), Gaps = 54/380 (14%)
Query: 116 TYSF-----LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARH 170
T+SF LLS + LL +Q+ +++ G + F + LI F A + ++R+
Sbjct: 47 THSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCA----LSESRY 102
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA 230
+ D + ++ + N+ SW I G ++ K++
Sbjct: 103 L-------------------------DYSVKILKGIENPNIFSWNVTIRGFSESENPKES 137
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNN 290
L+ +M R DL+L H + + R + V +N
Sbjct: 138 FLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHV--HN 195
Query: 291 ALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
A IHM+ASCG + +A +VF + P R VSW +I + K G ++A+ ++K M S
Sbjct: 196 ASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES----- 250
Query: 351 DGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLD 410
+GV+PD +T+I ++ +C G ++ G+ + + G+ I ++D+ S+ G +
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRMTIPLVNALMDMFSKCGDIH 309
Query: 411 EAHGLIENMPLKPNDALWGALLGG---CQIHKNSELASVVEPKLVAELDTDGAAGYLVLL 467
EA + +N+ K W ++ G C + V KL +++ + ++
Sbjct: 310 EARRIFDNLE-KRTIVSWTTMISGYARCGLLD-------VSRKLFDDMEEKDVVLWNAMI 361
Query: 468 SNIYAFAKRWQDVIAVRQKM 487
AKR QD +A+ Q+M
Sbjct: 362 GGSVQ-AKRGQDALALFQEM 380
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 105/225 (46%), Gaps = 10/225 (4%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNP 77
+ + C +I ++ + + L ++T + T ++S Y L + KLF ++
Sbjct: 298 LMDMFSKCGDIH-----EARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+WN +I G ++ ++ +++M ++ +P+ T LSAC + G L G +H
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
+ NV + T+L++ YA G + +A VF G+ R+ +++ +I+ G GD
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAS 472
Query: 198 GARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMR 238
A F+EM + +++ +++ C G + F +M+
Sbjct: 473 TAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 252/456 (55%), Gaps = 14/456 (3%)
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC--VRGGLLREGEQ 135
+T W I R+ ++ + + M EPN T+ LLS C G G+
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 136 VHGIVLVKGYCSN-VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
+HG G N V V T +I Y+ RG ++AR VFD M ++ V+WN+++ GY+ G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
D A ++FD+MP R+++SWT MI G +KG ++AL F EM+ + V+
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G L G W+H YV + N VR++N+LI +Y CG + A QVF M +
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNN-----VRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R+ VSW S+I+ FA G E+L F+ M G +PDA+T L AC H G V+
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG-----FKPDAVTFTGALTACSHVGLVE 324
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
EG R F M + ISPRIEHYGC+VDL SRAG L++A L+++MP+KPN+ + G+LL
Sbjct: 325 EGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAA 384
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C H N+ + + K + +L+ + Y V+LSN+YA +W+ +R+KM +G+KK
Sbjct: 385 CSNHGNNIVLAERLMKHLTDLNVKSHSNY-VILSNMYAADGKWEGASKMRRKMKGLGLKK 443
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
PG S I+I+ +H F+AGD H + +I E+L I
Sbjct: 444 QPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELI 479
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 37 SQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTP 95
+++V + + K ++ ++ Y+ S Q+ +A K+F + W +I G+ +
Sbjct: 128 ARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQ 187
Query: 96 WKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNL 155
+++ +R+M + +P+ L+AC G L G VH VL + + +NV V +L
Sbjct: 188 EEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSL 247
Query: 156 INFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NV 211
I+ Y G VE AR VF M +R+VVSWNS++ G+ + G+ + F +M + +
Sbjct: 248 IDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDA 307
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMR 238
V++T + C+ G ++ L F M+
Sbjct: 308 VTFTGALTACSHVGLVEEGLRYFQIMK 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 5 RFVPASGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIAS 61
R + SG + + L +C N+ L + +H V+ + L+ Y
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
++ A ++F ++ + WN +I G+A + +S+ +R+M +P+ T++ L
Sbjct: 255 GCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGAL 314
Query: 122 SACVRGGLLREG 133
+AC GL+ EG
Sbjct: 315 TACSHVGLVEEG 326
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 279/531 (52%), Gaps = 16/531 (3%)
Query: 22 LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
++ +C +++L ++++ + +G+ +++ L+ Y+ + + A +LF +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
+ N + Y R +++ + M+ + P+ + +S+C + + G+ HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
VL G+ S + LI+ Y + A +FD M ++VV+WNSI+AGYV G+ D
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR-VEXXXXXXXXXXXXXX 257
A F+ MP +N+VSW T+I+G Q ++A+ +F M+ V
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G L L +WI++Y++ +N Q VRL L+ M++ CG A +F + R
Sbjct: 482 HLGALDLAKWIYYYIE-----KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+WT+ I A A G + A+ LF M+ G ++PD + + L AC H G V +G+
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQG-----LKPDGVAFVGALTACSHGGLVQQGK 591
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
IF SM + G+SP HYGCMVDLL RAG L+EA LIE+MP++PND +W +LL C++
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
N E+A+ K+ ++ G VLLSN+YA A RW D+ VR M E G++KPPG
Sbjct: 652 QGNVEMAAYAAEKI--QVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPG 709
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
S IQI G H+F +GD +H I +L E+ +++ + PD++ +
Sbjct: 710 TSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLM 760
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 164/350 (46%), Gaps = 46/350 (13%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI---ASDQLQHAHKLFSTIDNPST 79
L++C I L H + GL + ITKL++ + L A ++F ++ T
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 80 T-VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
++N +IRGYA S +++ + +M+++ P+ +T+ F LSAC + G Q+HG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+++ GY ++FV+ +L++FYA G ++ AR VFD M +R+VVSW S++ GY
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY-------- 210
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXXX 257
ARR F K A+ LF M R V
Sbjct: 211 ARRDF-----------------------AKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
DL+ G ++ +++ + N S AL+ MY C I A ++F + +
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVS-----ALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
+M + +QGL +EALG+F M+ GVRPD I+++ + +C
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMD-----SGVRPDRISMLSAISSC 347
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 194/437 (44%), Gaps = 21/437 (4%)
Query: 31 NLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYA 90
N IQIH +V G ++ + L+ FY +L A K+F + + W +I GYA
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 91 RSHTPWKSVECYRQMV-STEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNV 149
R +V+ + +MV E PN T ++SAC + L GE+V+ + G N
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 150 FVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR 209
+ + L++ Y ++ A+ +FD G ++ N++ + YV G A VF+ M
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 210 NV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
V +S + I+ C+Q S G + R E +K
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY-----MKCH 386
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
R + RI R + V N+++ Y G + A++ F MP+++ VSW ++I
Sbjct: 387 RQDTAF---RIFDRMSNKTVVTW-NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
+ L +EA+ +F +M S +GV D +T++ + AC H G +D + I+ + +
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQ----EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELAS 445
GI + +VD+ SR G + A + ++ + A W A +G + N+E A
Sbjct: 499 N-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA-WTAAIGAMAMAGNAERAI 556
Query: 446 VVEPKLVAE-LDTDGAA 461
+ ++ + L DG A
Sbjct: 557 ELFDDMIEQGLKPDGVA 573
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
+ ++I G A G C +A+ LF M + + G IH +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ A++ + + N+L+H YA CG + A +VF +M +R+ VSWTSMI +A++
Sbjct: 162 KMGYAKD-----LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
K+A+ LF MV D + V P+++T++ V+ AC ++ G +++A + R GI
Sbjct: 217 KDAVDLFFRMVRD----EEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVND 271
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIE 417
+VD+ + +D A L +
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFD 295
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 279/531 (52%), Gaps = 16/531 (3%)
Query: 22 LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
++ +C +++L ++++ + +G+ +++ L+ Y+ + + A +LF +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
+ N + Y R +++ + M+ + P+ + +S+C + + G+ HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
VL G+ S + LI+ Y + A +FD M ++VV+WNSI+AGYV G+ D
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR-VEXXXXXXXXXXXXXX 257
A F+ MP +N+VSW T+I+G Q ++A+ +F M+ V
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G L L +WI++Y++ +N Q VRL L+ M++ CG A +F + R
Sbjct: 482 HLGALDLAKWIYYYIE-----KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+WT+ I A A G + A+ LF M+ G ++PD + + L AC H G V +G+
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQG-----LKPDGVAFVGALTACSHGGLVQQGK 591
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
IF SM + G+SP HYGCMVDLL RAG L+EA LIE+MP++PND +W +LL C++
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
N E+A+ K+ ++ G VLLSN+YA A RW D+ VR M E G++KPPG
Sbjct: 652 QGNVEMAAYAAEKI--QVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPG 709
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
S IQI G H+F +GD +H I +L E+ +++ + PD++ +
Sbjct: 710 TSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLM 760
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 164/350 (46%), Gaps = 46/350 (13%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI---ASDQLQHAHKLFSTIDNPST 79
L++C I L H + GL + ITKL++ + L A ++F ++ T
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 80 T-VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
++N +IRGYA S +++ + +M+++ P+ +T+ F LSAC + G Q+HG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+++ GY ++FV+ +L++FYA G ++ AR VFD M +R+VVSW S++ GY
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY-------- 210
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXXX 257
ARR F K A+ LF M R V
Sbjct: 211 ARRDF-----------------------AKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
DL+ G ++ +++ + N S AL+ MY C I A ++F + +
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVS-----ALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
+M + +QGL +EALG+F M+ GVRPD I+++ + +C
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMD-----SGVRPDRISMLSAISSC 347
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 194/437 (44%), Gaps = 21/437 (4%)
Query: 31 NLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYA 90
N IQIH +V G ++ + L+ FY +L A K+F + + W +I GYA
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 91 RSHTPWKSVECYRQMV-STEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNV 149
R +V+ + +MV E PN T ++SAC + L GE+V+ + G N
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 150 FVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR 209
+ + L++ Y ++ A+ +FD G ++ N++ + YV G A VF+ M
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 210 NV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
V +S + I+ C+Q S G + R E +K
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY-----MKCH 386
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
R + RI R + V N+++ Y G + A++ F MP+++ VSW ++I
Sbjct: 387 RQDTAF---RIFDRMSNKTVVTW-NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
+ L +EA+ +F +M S +GV D +T++ + AC H G +D + I+ + +
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQ----EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELAS 445
GI + +VD+ SR G + A + ++ + A W A +G + N+E A
Sbjct: 499 N-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA-WTAAIGAMAMAGNAERAI 556
Query: 446 VVEPKLVAE-LDTDGAA 461
+ ++ + L DG A
Sbjct: 557 ELFDDMIEQGLKPDGVA 573
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
+ ++I G A G C +A+ LF M + + G IH +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ A++ + + N+L+H YA CG + A +VF +M +R+ VSWTSMI +A++
Sbjct: 162 KMGYAKD-----LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
K+A+ LF MV D + V P+++T++ V+ AC ++ G +++A + R GI
Sbjct: 217 KDAVDLFFRMVRD----EEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVND 271
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIE 417
+VD+ + +D A L +
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFD 295
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 282/544 (51%), Gaps = 46/544 (8%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
+++ C+ + L + ++ L+Q ++ + ++ + +L A + + P+ V
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFV 838
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
+N + +G+ P +S+E Y +M+ P+ +TYS L+ A R GE + +
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIW 896
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW------------------ 183
G+ +V ++T LI+FY+ G + +AR VFD M +R ++W
Sbjct: 897 KFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANS 956
Query: 184 -------------NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA 230
N ++ GY+ G+ + A +F++MP+++++SWTTMI G +Q R ++A
Sbjct: 957 LANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREA 1016
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNN 290
+++F +M + G L++G+ +H Y Q + V + +
Sbjct: 1017 IAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLD-----VYIGS 1071
Query: 291 ALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
AL+ MY+ CG + A VF +P+++ W S+I A G +EAL +F M +
Sbjct: 1072 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM-----EM 1126
Query: 351 DGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLD 410
+ V+P+A+T + V AC HAG VDEGRRI+ SM + I +EHYG MV L S+AG +
Sbjct: 1127 ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIY 1186
Query: 411 EAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNI 470
EA LI NM +PN +WGALL GC+IHKN +A + KL+ + +GY LL ++
Sbjct: 1187 EALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMN--SGYYFLLVSM 1244
Query: 471 YAFAKRWQDVIAVRQKMIEMGVKKP-PGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSE 529
YA RW+DV +R +M E+G++K PG S I+I+ H F A D +H S + +L E
Sbjct: 1245 YAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDE 1304
Query: 530 IIKQ 533
I Q
Sbjct: 1305 IYDQ 1308
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 257/480 (53%), Gaps = 26/480 (5%)
Query: 81 VWNHIIRGYARS------HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
+WN IIR + H+P + Y +M + P+ T+ FLL + L G+
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSP---ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
+ H +L+ G + FV T+L+N Y+ G + A+ VFD G + + +WNS++ Y G
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR-----RARVEXXXXXX 249
D AR++FDEMP RNV+SW+ +I G G+ K+AL LF EM+ A V
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G L+ G+W+H Y+ + V + + L ALI MYA CG + A +VF
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHV-----EIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 310 TKMPQRSTV-SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
+ + V ++++MI A GL E LF M + D + P+++T + +L AC
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTS----DNINPNSVTFVGILGACV 313
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
H G ++EG+ F M +GI+P I+HYGCMVDL R+G + EA I +MP++P+ +W
Sbjct: 314 HRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
G+LL G ++ + + +L+ ELD + Y VLLSN+YA RW +V +R +M
Sbjct: 374 GSLLSGSRMLGDIKTCEGALKRLI-ELDPMNSGAY-VLLSNVYAKTGRWMEVKCIRHEME 431
Query: 489 EMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
G+ K PG S++++ GVVH+FV GD + + S IY +L EI+++ Y D L
Sbjct: 432 VKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLL 491
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 46/272 (16%)
Query: 12 RRSIQQHVFT-LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
R S H F LL S +N +L + H+Q++L GL + + T LL+ Y + L+ A
Sbjct: 57 RVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSA 116
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARS-----------HTPWKSV----------------- 99
++F + WN ++ YA++ P ++V
Sbjct: 117 QRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYK 176
Query: 100 ---ECYRQM---VSTEA--EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
+ +R+M EA PN FT S +LSAC R G L +G+ VH + ++ +
Sbjct: 177 EALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVL 236
Query: 152 ETNLINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR- 209
T LI+ YA G +E+A+ VF+ +G ++ V ++++++ G D ++F EM
Sbjct: 237 GTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD 296
Query: 210 ----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
N V++ ++ C +G + S F M
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMM 328
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 275/529 (51%), Gaps = 51/529 (9%)
Query: 51 ITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA 110
+ K+++ + S + A ++F + +T WN ++ G ++ P + +E + Q+
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD--PSRMMEAH-QLFDEIP 120
Query: 111 EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARH 170
EP+ F+Y+ +LS VR + + + K S +I YA RG +E+AR
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAAS----WNTMITGYARRGEMEKARE 176
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMI------------ 218
+F M +++ VSWN++++GY+ CGD + A F P+R VV+WT MI
Sbjct: 177 LFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELA 236
Query: 219 --------------------AGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
+G + R + L LF M +
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
L+LGR IH +IV+++ V +LI MY CG +GDA+++F M ++ V
Sbjct: 297 LSALQLGRQIH-----QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W +MI +A+ G +AL LF+ M+ + +RPD IT + VL AC HAG V+ G
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNK-----IRPDWITFVAVLLACNHAGLVNIGMA 406
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F SM R + + P+ +HY CMVDLL RAG L+EA LI +MP +P+ A++G LLG C++H
Sbjct: 407 YFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVH 466
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
KN ELA KL+ +L++ AAGY V L+NIYA RW+DV VR++M E V K PG
Sbjct: 467 KNVELAEFAAEKLL-QLNSQNAAGY-VQLANIYASKNRWEDVARVRKRMKESNVVKVPGY 524
Query: 499 SWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
SWI+I VH F + D H I++ L E+ K+ + Y+P++ A
Sbjct: 525 SWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFAL 573
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH V + L +T L+S Y +L A KLF + WN +I GYA+
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
K++ +R+M+ + P+ T+ +L AC GL+ G
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 279/533 (52%), Gaps = 17/533 (3%)
Query: 18 HVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
H LQ C + L +H+ +V G+ Q + L++ Y HA ++F +
Sbjct: 5 HYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEM 64
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREG 133
+ W ++ +++ K++ + + S+ P+ F +S L+ AC G + G
Sbjct: 65 PHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
QVH +V Y ++ V+++L++ YA G + A+ VFD + ++ +SW ++++GY
Sbjct: 125 RQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKS 184
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
G + A +F +P++N+ SWT +I+G Q G+ +A S+F EMRR RV+
Sbjct: 185 GRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSI 244
Query: 254 XXXXXXGDLKL-GRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
+ GR +H +V V ++NALI MYA C + A +F++M
Sbjct: 245 VGACANLAASIAGRQVHG-----LVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
R VSWTS+I+ A+ G ++AL L+ MVS G V+P+ +T + ++ AC H GF
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG-----VKPNEVTFVGLIYACSHVGF 354
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
V++GR +F SM + +GI P ++HY C++DLL R+G LDEA LI MP P++ W ALL
Sbjct: 355 VEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALL 414
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
C+ ++ + LV+ + Y +LLSNIYA A W V R+K+ EM V
Sbjct: 415 SACKRQGRGQMGIRIADHLVSSFKLKDPSTY-ILLSNIYASASLWGKVSEARRKLGEMEV 473
Query: 493 KKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHV-DSYEPDIT 544
+K PG S +++ F AG+ +H I+ +L ++ ++ + + Y PD +
Sbjct: 474 RKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTS 526
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 274/523 (52%), Gaps = 15/523 (2%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSF-YIASDQLQHAHKLFST 73
+ Q + ++ ++ +L Q+ S ++++GLS + KLL F + L +A +F
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKS--VECYRQMVS-TEAEPNGFTYSFLLSACVRGGLL 130
P+T ++ ++ Y+ S S +R MV+ + PN F Y +L +
Sbjct: 83 FSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA 142
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGR-GGVEQARHVFDGMGQRSVVSWNSILAG 189
VH + G+ V V+T L++ YA + AR +FD M +R+VVSW ++L+G
Sbjct: 143 FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSG 202
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXX 248
Y GD A +F++MP R+V SW ++A C Q G +A+SLF M +
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVT 262
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G L+L + IH + +R ++ + V ++N+L+ +Y CG + +A V
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSD-----VFVSNSLVDLYGKCGNLEEASSV 317
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F ++S +W SMI FA G +EA+ +F+ M+ ++ ++PD IT I +L AC
Sbjct: 318 FKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK--LNINDIKPDHITFIGLLNACT 375
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
H G V +GR F M +GI PRIEHYGC++DLL RAG DEA ++ M +K ++A+W
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
G+LL C+IH + +LA V LVA +G GY+ +++N+Y W++ R+ +
Sbjct: 436 GSLLNACKIHGHLDLAEVAVKNLVALNPNNG--GYVAMMANLYGEMGNWEEARRARKMIK 493
Query: 489 EMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEII 531
KPPG S I+I+ VH F + D +H + IY IL +I
Sbjct: 494 HQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 266/528 (50%), Gaps = 45/528 (8%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
L S + + L +IH+ V+ G S+K +++T+LL + + +A ++F + P +
Sbjct: 17 LRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFL 76
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
WN + +GY R+ P++S+ Y++M P+ FTY F++ A + G G +H V+
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
G+ V T L+ Y + G+ A
Sbjct: 137 KYGFGCLGIVATELVMMY-------------------------------MKFGELSSAEF 165
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD 261
+F+ M ++++V+W +A C Q G AL F +M V+ G
Sbjct: 166 LFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGS 225
Query: 262 LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWT 321
L++G I+ ++ + N + + NA + M+ CG A +F +M QR+ VSW+
Sbjct: 226 LEIGEEIYDRARKEEIDCN-----IIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWS 280
Query: 322 SMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
+MI+ +A G +EAL LF TM ++G +RP+ +T + VL AC HAG V+EG+R F+
Sbjct: 281 TMIVGYAMNGDSREALTLFTTMQNEG-----LRPNYVTFLGVLSACSHAGLVNEGKRYFS 335
Query: 382 SM--NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK 439
M + + PR EHY CMVDLL R+G L+EA+ I+ MP++P+ +WGALLG C +H+
Sbjct: 336 LMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHR 395
Query: 440 NSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQS 499
+ L V LV G+ Y VLLSNIYA A +W V VR KM ++G KK S
Sbjct: 396 DMILGQKVADVLVETAPDIGS--YHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYS 453
Query: 500 WIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
++ G +H F GD +H S IYE L EI+K+ Y PD F
Sbjct: 454 SVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 257/516 (49%), Gaps = 43/516 (8%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
I +HS VV G + +T LLS Y S +L AHKLF I + S W + GY S
Sbjct: 131 IDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS 190
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
++++ +++MV +P+ + +LSACV G L GE + + N FV
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
T L+N YA CG + AR VFD M +++V
Sbjct: 251 TTLVNLYA-------------------------------KCGKMEKARSVFDSMVEKDIV 279
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
+W+TMI G A K+ + LF +M + ++ G L LG W
Sbjct: 280 TWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW----- 334
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
++ R++ ++ + NALI MYA CG + ++VF +M ++ V + I AK G
Sbjct: 335 GISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGH 394
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
K + +F G + PD T + +LC C HAG + +G R F +++ + +
Sbjct: 395 VKLSFAVFGQTEKLG-----ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
+EHYGCMVDL RAG LD+A+ LI +MP++PN +WGALL GC++ K+++LA V +L+
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
A L+ A Y V LSNIY+ RW + VR M + G+KK PG SWI++ G VH+F+A
Sbjct: 510 A-LEPWNAGNY-VQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLA 567
Query: 513 GDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
D +H S IY L ++ + + + P F
Sbjct: 568 DDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFF 603
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 185/404 (45%), Gaps = 53/404 (13%)
Query: 7 VPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
VP++ + Q + TL+ + +L QIH ++ + L T ++ LL + Q ++
Sbjct: 6 VPSATSKV--QQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKY 63
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
++ LFS P+ ++N +I G+ +H ++++ + + +GFT+ +L AC R
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 127 GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
+ G +H +V+ G+ +V T+L++ Y+G G +
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL--------------------- 162
Query: 187 LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
+ A ++FDE+P R+VV+WT + +G GR ++A+ LF +M V+
Sbjct: 163 ----------NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDS 212
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
GDL G WI Y+++ + Q + + L+++YA CG + A
Sbjct: 213 YFIVQVLSACVHVGDLDSGEWIVKYMEEM-----EMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
VF M ++ V+W++MI +A KE + LF M+ + ++PD +++ L +
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ-----ENLKPDQFSIVGFLSS 322
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLD 410
C G +D G WGIS I+ + + +L +D
Sbjct: 323 CASLGALDLGE---------WGIS-LIDRHEFLTNLFMANALID 356
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 12/233 (5%)
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD 261
+F N+ + ++I G + L LF +R+ +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 262 LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWT 321
KLG +H +V + V +L+ +Y+ G + DA+++F ++P RS V+WT
Sbjct: 127 RKLGIDLH-----SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWT 181
Query: 322 SMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
++ + G +EA+ LFK MV GV+PD+ ++ VL AC H G +D G I
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVE-----MGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 236
Query: 382 SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
M + +V+L ++ G +++A + ++M ++ + W ++ G
Sbjct: 237 YMEEM-EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 274/525 (52%), Gaps = 22/525 (4%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
+ H+ + C + ++ Q+ L L N++ S Y+ S L A +F ++
Sbjct: 84 LSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMV----SGYVKSGMLVRARVVFDSM 139
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
WN ++ GYA+ +++ Y++ + + N F+++ LL+ACV+ L+
Sbjct: 140 PERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNR 199
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
Q HG VLV G+ SNV + ++I+ YA G +E A+ FD M + + W ++++GY G
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLG 259
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
D + A ++F EMP +N VSWT +IAG ++G +AL LF +M V+
Sbjct: 260 DMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
L+ G+ IH Y + R +P+ + ++LI MY+ G + + +VF
Sbjct: 320 ASASIASLRHGKEIHGY-----MIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 315 R-STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+ V W +MI A A+ GLG +AL + M+ V+P+ TL+V+L AC H+G V
Sbjct: 375 KHDCVFWNTMISALAQHGLGHKALRMLDDMIK-----FRVQPNRTTLVVILNACSHSGLV 429
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
+EG R F SM GI P EHY C++DLL RAG E IE MP +P+ +W A+LG
Sbjct: 430 EEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILG 489
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
C+IH N EL +L+ +LD + +A Y +LLS+IYA +W+ V +R M + V
Sbjct: 490 VCRIHGNEELGKKAADELI-KLDPESSAPY-ILLSSIYADHGKWELVEKLRGVMKKRRVN 547
Query: 494 KPPGQSWIQINGVVHDFVAGDMTHKHS-----YFIYEILSEIIKQ 533
K SWI+I V F D +H H+ YFI L+ +I++
Sbjct: 548 KEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEE 592
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 155/346 (44%), Gaps = 33/346 (9%)
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYC-SNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
LL C L++G+ +H + + G+ N + +LI Y G A VFD M R
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
++ SWN++++GYV G AR VFD MP R+VVSW TM+ G AQ G +AL + E R
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV-----------------------QQR 275
R+ ++ L+L R H V Q
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 276 IVARNQQQPSVR---LNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
R + +V+ + LI YA G + A ++F +MP+++ VSWT++I + +QG
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
G AL LF+ M++ GV+P+ T LCA + G+ I M RT + P
Sbjct: 292 GNRALDLFRKMIA-----LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPN 345
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
++D+ S++G L+ + + K + W ++ H
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQH 391
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 192/647 (29%), Positives = 298/647 (46%), Gaps = 118/647 (18%)
Query: 6 FVPASGR---RSIQQH-VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS 61
F+P+S SI+ H +LL +C +Q+L IH+Q++ GL ++KL+ F I S
Sbjct: 19 FLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILS 78
Query: 62 ---DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYS 118
+ L +A +F TI P+ +WN + RG+A S P +++ Y M+S PN +T+
Sbjct: 79 PHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFP 138
Query: 119 FLLSACVRGGLLREG--------------------------------EQVHGI------- 139
F+L +C + +EG E H +
Sbjct: 139 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 198
Query: 140 ------VLVKGYCSNVFVETN-----------------LINFYAGRGGVEQARHVFDGMG 176
L+KGY S ++E +I+ YA G ++A +F M
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 177 Q--------------------------RSVVSW-------------NSILAGYVSCGDFD 197
+ R V W N+++ Y CG+ +
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 318
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A +F+ +P ++V+SW T+I G K+AL LF EM R+
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G + +GRWIH Y+ +R+ L +LI MYA CG I A+QVF + +S
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNAS---SLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
SW +MI FA G + LF M G ++PD IT + +L AC H+G +D GR
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIG-----IQPDDITFVGLLSACSHSGMLDLGR 490
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
IF +M + + ++P++EHYGCM+DLL +G EA +I M ++P+ +W +LL C++
Sbjct: 491 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 550
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H N EL L+ +++ + Y VLLSNIYA A RW +V R + + G+KK PG
Sbjct: 551 HGNVELGESFAENLI-KIEPENPGSY-VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 608
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
S I+I+ VVH+F+ GD H + IY +L E+ + PD +
Sbjct: 609 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTS 655
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/539 (31%), Positives = 274/539 (50%), Gaps = 19/539 (3%)
Query: 17 QHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQ--KTNIITKLLSFYIASDQLQHAHKLF 71
Q V LL+ C + L ++H+ + +GL + ++ + L FY +S ++ A KLF
Sbjct: 7 QKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLF 66
Query: 72 STI--DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
I W ++ ++R S++ + +M E + + L C +
Sbjct: 67 DEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLED 126
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
L +Q HG+ + G ++V V L++ Y G V + + +F+ + ++SVVSW +L
Sbjct: 127 LGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDT 186
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR-RARVEXXXXX 248
V + R VF EMP RN V+WT M+AG G ++ L L EM R
Sbjct: 187 VVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVT 246
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYV--QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
G+L +GRW+H Y ++ ++ V + AL+ MYA CG I +
Sbjct: 247 LCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSM 306
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
VF M +R+ V+W ++ A G G+ + +F M+ + V+PD +T VL A
Sbjct: 307 NVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE------VKPDDLTFTAVLSA 360
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
C H+G VDEG R F S+ R +G+ P+++HY CMVDLL RAG ++EA L+ MP+ PN+
Sbjct: 361 CSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEV 419
Query: 427 LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQK 486
+ G+LLG C +H E+A ++ +L+ + G Y +L+SN+Y R +R
Sbjct: 420 VLGSLLGSCSVHGKVEIAERIKRELIQM--SPGNTEYQILMSNMYVAEGRSDIADGLRGS 477
Query: 487 MIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITG 545
+ + G++K PG S I +N VH F +GD +H + IY L+E+I++ Y PD++G
Sbjct: 478 LRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSG 536
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 275/545 (50%), Gaps = 75/545 (13%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK-LFSTIDNPST 79
TL + C + +L QIH++++ GL Q N+I+ +S +S +F + +P T
Sbjct: 15 TLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGT 74
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTE-AEPNGFTYSFLLSACVRGGLLREGEQVHG 138
+WNH+I+GY+ +++V +M+ T A P+ +T+ ++ C G +R G VHG
Sbjct: 75 YLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHG 134
Query: 139 IVLVKGYCSNVFVETNLINFYAG-------------------------------RGGVEQ 167
+VL G+ +V V T+ ++FY G +E+
Sbjct: 135 LVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEE 194
Query: 168 ARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMI--------- 218
A+ +FD M +R++ SWN+++ G V GD A+++FDEMP R+++S+T+MI
Sbjct: 195 AKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDM 254
Query: 219 ----------------------AGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
G AQ G+ +A +F EM V+
Sbjct: 255 VSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSAC 314
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
G +L + Y+ QR+ + S + ALI M A CG + A ++F +MPQR
Sbjct: 315 SQMGCFELCEKVDSYLHQRM----NKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRD 370
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
VS+ SM+ A G G EA+ LF+ MV +G + PD + V+L C + V+EG
Sbjct: 371 LVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG-----IVPDEVAFTVILKVCGQSRLVEEG 425
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
R F M + + I +HY C+V+LLSR G L EA+ LI++MP + + + WG+LLGGC
Sbjct: 426 LRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCS 485
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
+H N+E+A VV L EL+ A Y VLLSNIYA RW DV +R KM E G+ K
Sbjct: 486 LHGNTEIAEVVARHLF-ELEPQSAGSY-VLLSNIYAALDRWTDVAHLRDKMNENGITKIC 543
Query: 497 GQSWI 501
G+SWI
Sbjct: 544 GRSWI 548
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 275/528 (52%), Gaps = 46/528 (8%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
LL +C + + L ++H+ ++ T + T+LL FY D L+ A K+ +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ W +I Y+++ +++ + +M+ ++ +PN FT++ +L++C+R L G+Q+H
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G+++ Y S++FV ++L++ YA G +++
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKE------------------------------ 206
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
AR +F+ +P R+VVS T +IAG AQ G ++AL +F + +
Sbjct: 207 -AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
L G+ H +V +R + L N+LI MY+ CG + A ++F MP+R+
Sbjct: 266 GLALLDHGKQAHCHVLRR-----ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTA 320
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+SW +M++ ++K GLG+E L LF+ M + V+PDA+TL+ VL C H D G
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLMRDEKR----VKPDAVTLLAVLSGCSHGRMEDTGL 376
Query: 378 RIFASM-NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
IF M +G P EHYGC+VD+L RAG +DEA I+ MP KP + G+LLG C+
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACR 436
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
+H + ++ V +L+ E++ + A Y V+LSN+YA A RW DV VR M++ V K P
Sbjct: 437 VHLSVDIGESVGRRLI-EIEPENAGNY-VILSNLYASAGRWADVNNVRAMMMQKAVTKEP 494
Query: 497 GQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
G+SWIQ +H F A D TH + + EI + Y PD++
Sbjct: 495 GRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLS 542
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 148/323 (45%), Gaps = 45/323 (13%)
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
Y LL+AC+ LR+G++VH ++ Y ++ T L+ FY +E AR V D M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
+++VVSW ++++ Y +Q G +AL++F E
Sbjct: 115 EKNVVSWTAMISRY-------------------------------SQTGHSSEALTVFAE 143
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M R+ + L LG+ IH ++ + + + ++L+ MY
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG-----LIVKWNYDSHIFVGSSLLDMY 198
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
A G I +A ++F +P+R VS T++I +A+ GL +EAL +F + S +G+ P+
Sbjct: 199 AKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS-----EGMSPN 253
Query: 357 AITLIVVLCACCHAGFVDEGRRIFAS-MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
+T +L A +D G++ + R +++ ++D+ S+ G L A L
Sbjct: 254 YVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYARRL 311
Query: 416 IENMPLKPNDALWGALLGGCQIH 438
+NMP + + W A+L G H
Sbjct: 312 FDNMPERTAIS-WNAMLVGYSKH 333
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 275/506 (54%), Gaps = 20/506 (3%)
Query: 16 QQHVFTLLQSCNNIQNLIQIHSQVVLNG-LSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
+Q L+++ + + + QIH ++++G LS + L+ FY+ A K+F+ +
Sbjct: 133 RQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARM 192
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
+P + +N +I GYA+ ++++ Y +MVS EP+ +T LL C +R G+
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 135 QVHGIVLVKG--YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
VHG + +G Y SN+ + L++ Y A+ FD M ++ + SWN+++ G+V
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVR 312
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ--ALSLFGEMR-RARVEXXXXXX 249
GD + A+ VFD+MP R++VSW +++ G ++KG C Q LF EM +V+
Sbjct: 313 LGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG-CDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G+L GRW+H +V R Q + L++ALI MY CG+I A+ VF
Sbjct: 372 VSLISGAANNGELSHGRWVHG-----LVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF 426
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
++ WTSMI A G G++AL LF M +G V P+ +TL+ VL AC H
Sbjct: 427 KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG-----VTPNNVTLLAVLTACSH 481
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE-NMPLKPNDALW 428
+G V+EG +F M +G P EHYG +VDLL RAG ++EA +++ MP++P+ ++W
Sbjct: 482 SGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMW 541
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
G++L C+ ++ E A + +L+ +L+ + GY VLLSNIYA RW R+ M
Sbjct: 542 GSILSACRGGEDIETAELALTELL-KLEPEKEGGY-VLLSNIYATVGRWGYSDKTREAME 599
Query: 489 EMGVKKPPGQSWIQINGVVHDFVAGD 514
GVKK G S + +H FVA +
Sbjct: 600 NRGVKKTAGYSSVVGVEGLHRFVAAE 625
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 261/524 (49%), Gaps = 45/524 (8%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+LL S + +NL QIH ++ + +S + + L+ Y + A +FS ++
Sbjct: 345 SLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
V+ +I GY + S+E +R +V + PN T +L L+ G ++H
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G ++ KG+ + + +I+ YA CG +
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYA-------------------------------KCGRMN 493
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A +F+ + R++VSW +MI CAQ A+ +F +M + +
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G+ IH ++ + +A + V + LI MYA CG + A VF M +++
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASD-----VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSW S+I A G K++L LF MV G+RPD IT + ++ +CCH G VDEG
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKS----GIRPDQITFLEIISSCCHVGDVDEGV 664
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
R F SM +GI P+ EHY C+VDL RAG L EA+ +++MP P+ +WG LLG C++
Sbjct: 665 RFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRL 724
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
HKN ELA V KL+ +LD +GY VL+SN +A A+ W+ V VR M E V+K PG
Sbjct: 725 HKNVELAEVASSKLM-DLDPSN-SGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPG 782
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
SWI+IN H FV+GD+ H S IY +L+ ++ + ++ Y P
Sbjct: 783 YSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 176/406 (43%), Gaps = 43/406 (10%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+Q+H VV++G+ + +I LLS Y + A KLF + T WN +I GY +S
Sbjct: 259 VQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+S+ + +M+S+ P+ T+S LL + + L +Q+H ++ ++F+
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
+ LI+ Y GV A+++F C D VV
Sbjct: 379 SALIDAYFKCRGVSMAQNIFS------------------QCNSVD-------------VV 407
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
+T MI+G G +L +F + + ++ LKLGR +H ++
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
++ + A+I MYA CG + AY++F ++ +R VSW SMI A+
Sbjct: 468 IKKGFDNR-----CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
A+ +F+ M GV G+ D +++ L AC + G+ I M + ++
Sbjct: 523 PSAAIDIFRQM-----GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKH-SLASD 576
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
+ ++D+ ++ G L A + + M K N W +++ C H
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNH 621
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 162/363 (44%), Gaps = 56/363 (15%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLI----QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
+I + + LLQ+C+N NL+ Q+H+ +++N +S + ++L Y
Sbjct: 31 EETIPRRLSLLLQACSN-PNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDC 89
Query: 68 HKLFSTIDNPSTTV--WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
K+F +D +++ WN II + R+ +++ Y +M+ P+ T+ L+ ACV
Sbjct: 90 GKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV 149
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
+ + + V G N FV ++LI Y G ++ +FD + Q+ V WN
Sbjct: 150 ALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNV 209
Query: 186 ILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
+L GY CG D + F M + N V++ +++ CA K
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL--------------- 254
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
+ LG +H V +V+ + S++ N+L+ MY+ CG
Sbjct: 255 --------------------IDLGVQLHGLV---VVSGVDFEGSIK--NSLLSMYSKCGR 289
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
DA ++F M + TV+W MI + + GL +E+L F M+S GV PDAIT
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS-----SGVLPDAITFS 344
Query: 362 VVL 364
+L
Sbjct: 345 SLL 347
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 273/538 (50%), Gaps = 48/538 (8%)
Query: 16 QQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIA----SDQLQHAHKLF 71
+Q LL+ C+NI Q+H++ + L ++ + A + + +A +F
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
ID+P T +N +IRGY + +++ Y +M+ EP+ FTY LL AC R +R
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
EG+Q+HG V G ++VFV+ +LIN Y GR
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMY-GR----------------------------- 179
Query: 192 SCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF-GEMRRARVEXXXXXXX 250
CG+ + + VF+++ + SW++M++ A G + L LF G ++
Sbjct: 180 -CGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV 238
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
G L LG IH ++ RN + ++ + +L+ MY CG + A +F
Sbjct: 239 SALLACANTGALNLGMSIHGFL-----LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQ 293
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
KM +R+ +++++MI A G G+ AL +F M+ +G + PD + + VL AC H+
Sbjct: 294 KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEG-----LEPDHVVYVSVLNACSHS 348
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G V EGRR+FA M + + P EHYGC+VDLL RAG L+EA I+++P++ ND +W
Sbjct: 349 GLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRT 408
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
L C++ +N EL + +L+ +L + YL L+SN+Y+ + W DV R ++
Sbjct: 409 FLSQCRVRQNIELGQIAAQELL-KLSSHNPGDYL-LISNLYSQGQMWDDVARTRTEIAIK 466
Query: 491 GVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
G+K+ PG S +++ G H FV+ D +H IY++L ++ Q + Y PD+T L
Sbjct: 467 GLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILL 524
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 274/516 (53%), Gaps = 53/516 (10%)
Query: 24 QSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI----ASDQLQHAHKLFSTIDNPST 79
Q CN ++ + HS +++GL + T I+KLL+ ++ + +A +F +I+ P++
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAE---PNGFTYSFLLSACVRGGLLREGEQV 136
V++ +IR +RS P + + MV E E P+ T+ FL+ AC++ G+Q+
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 137 HGIVLVKG-YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
H V+ G + S+ V+T ++ Y + + +FD
Sbjct: 139 HCWVVKNGVFLSDGHVQTGVLRIYV------EDKLLFD---------------------- 170
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
AR+VFDE+P +VV W ++ G + G + L +F EM +E
Sbjct: 171 ---ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTA 227
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
G L G+WIH +V+++ + V + AL+ MYA CG I A +VF K+ +R
Sbjct: 228 CAQVGALAQGKWIHEFVKKK----RWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRR 283
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ SW ++I +A G K+A + + DG++PD++ L+ VL AC H GF++E
Sbjct: 284 NVFSWAALIGGYAAYGYAKKATTCLDRIERE----DGIKPDSVVLLGVLAACAHGGFLEE 339
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
GR + +M +GI+P+ EHY C+VDL+ RAG LD+A LIE MP+KP ++WGALL GC
Sbjct: 340 GRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGC 399
Query: 436 QIHKNSELASVVEPKLV----AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMG 491
+ HKN EL + L+ ++ + AA LV LSNIY +R + VR + + G
Sbjct: 400 RTHKNVELGELAVQNLLDLEKGNVEEEEAA--LVQLSNIYFSVQRNPEAFKVRGMIEQRG 457
Query: 492 VKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
++K PG S ++++G+V FV+GD++H + I+ ++
Sbjct: 458 IRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/546 (30%), Positives = 264/546 (48%), Gaps = 54/546 (9%)
Query: 1 MLIERFVPASGRRSIQQHVF-TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLS 56
M IE VP Q+ + ++L++C + +L QIHSQ++ + + L+
Sbjct: 481 MQIEEIVP-------NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
Y +L A + W +I GY + + K++ +RQM+ +
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+ +SAC L+EG+Q+H V G+ S++ + L+ Y+
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS---------------- 637
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
CG + + F++ + ++W +++G Q G ++AL +F
Sbjct: 638 ---------------RCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M R ++ ++K G+ +H ++ + + NALI MY
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQGKQVH-----AVITKTGYDSETEVCNALISMY 737
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
A CG I DA + F ++ ++ VSW ++I A++K G G EAL F M+ VRP+
Sbjct: 738 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN-----VRPN 792
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
+TL+ VL AC H G VD+G F SMN +G+SP+ EHY C+VD+L+RAG L A I
Sbjct: 793 HVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFI 852
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKR 476
+ MP+KP+ +W LL C +HKN E+ L+ EL+ + +A Y VLLSN+YA +K+
Sbjct: 853 QEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL-ELEPEDSATY-VLLSNLYAVSKK 910
Query: 477 WQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHV 536
W RQKM E GVKK PGQSWI++ +H F GD H + I+E ++ K++
Sbjct: 911 WDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASE 970
Query: 537 DSYEPD 542
Y D
Sbjct: 971 IGYVQD 976
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 187/431 (43%), Gaps = 54/431 (12%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L +C I++L Q+H V+ G S T + L+S Y L A +FS +
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+N +I G ++ K++E +++M EP+ T + L+ AC G L G+Q+H
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 412
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G+ SN +E L+N YA +E A F +VV WN +L Y D
Sbjct: 413 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR 472
Query: 198 GARRVFDEMPIRNVV----SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
+ R+F +M I +V ++ +++ C +
Sbjct: 473 NSFRIFRQMQIEEIVPNQYTYPSILKTCIR------------------------------ 502
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
GDL+LG IH +I+ N Q + + + LI MYA G + A+ + +
Sbjct: 503 -----LGDLELGEQIH----SQIIKTNFQL-NAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+ VSWT+MI + + +AL F+ M+ G+R D + L + AC +
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-----RGIRSDEVGLTNAVSACAGLQAL 607
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
EG++I A + G S + +V L SR G ++E++ E N A W AL+
Sbjct: 608 KEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVS 665
Query: 434 GCQIHKNSELA 444
G Q N+E A
Sbjct: 666 GFQQSGNNEEA 676
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 191/433 (44%), Gaps = 52/433 (12%)
Query: 7 VPASGRRSIQQHVFTLLQSCNNIQNLI----QIHSQVVLNGLSQKTNIITKLLSFYIASD 62
V G R Q + LL+ C + ++HSQ++ GL + KL FY+
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
L A K+F + + WN +I+ A + + + +MVS PN T+S +L
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 123 ACVRGGLLREG--EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
AC RGG + EQ+H +L +G + V LI+ Y+ G V+ AR VFDG+ +
Sbjct: 195 AC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL-FGEMRR 239
SW ++++G A R+F +M + ++ T A + CK+ SL GE
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMP--TPYAFSSVLSACKKIESLEIGEQLH 311
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
V LKLG YV NAL+ +Y
Sbjct: 312 GLV-------------------LKLGFSSDTYV----------------CNALVSLYFHL 336
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G + A +F+ M QR V++ ++I ++ G G++A+ LFK M +DG+ PD+ T
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-----HLDGLEPDSNT 391
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
L ++ AC G + G+++ A + G + + G +++L ++ ++ A
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 420 PLKPNDALWGALL 432
++ N LW +L
Sbjct: 451 EVE-NVVLWNVML 462
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 272/510 (53%), Gaps = 23/510 (4%)
Query: 20 FTL---LQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
FTL L+S ++ +I+ +H V GL + + L+ Y + +++ HK+F
Sbjct: 47 FTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDE 106
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV-STEAEPNGFTYSFLLSACVRGGLLRE 132
+ WN +I Y + ++ +++M + + + T LSAC L
Sbjct: 107 MPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEI 166
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
GE+++ V+ + + +V + L++ + G +++AR VFD M ++V W S++ GYVS
Sbjct: 167 GERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVS 225
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
G D AR +F+ P+++VV WT M+ G Q R +AL LF M+ A +
Sbjct: 226 TGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSL 285
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G L+ G+WIH Y+ + V ++ + AL+ MYA CG I A +VF ++
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDKV-----VGTALVDMYAKCGCIETALEVFYEI 340
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
+R T SWTS+I A G+ AL L+ M + G VR DAIT + VL AC H GF
Sbjct: 341 KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVG-----VRLDAITFVAVLTACNHGGF 395
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL---WG 429
V EGR+IF SM + P+ EH C++DLL RAG LDEA LI+ M + ++ L +
Sbjct: 396 VAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYC 455
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
+LL + + N ++A V KL +D +A LL+++YA A RW+DV VR+KM +
Sbjct: 456 SLLSAARNYGNVKIAERVAEKLEKVEVSDSSAH--TLLASVYASANRWEDVTNVRRKMKD 513
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKH 519
+G++K PG S I+I+GV H+F+ GD H
Sbjct: 514 LGIRKFPGCSSIEIDGVGHEFIVGDDLLSH 543
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 166/394 (42%), Gaps = 64/394 (16%)
Query: 71 FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLL 130
S + PS ++N +++ A + K + + ++ P+ FT +L + R +
Sbjct: 3 MSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV 62
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
EGE+VHG + G + +V +L+ YA G +E VFD M QR VVSWN +++ Y
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
V G F+ A VF M + + + +G LS ++
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKF--------DEGTIVSTLSACSALK------------ 162
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
+L++G I+ +V + SVR+ NAL+ M+ CG + A VF
Sbjct: 163 ----------NLEIGERIYRFVVTEF------EMSVRIGNALVDMFCKCGCLDKARAVFD 206
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFK----------TMVSDG------------- 347
M ++ WTSM+ + G EA LF+ T + +G
Sbjct: 207 SMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALEL 266
Query: 348 ---AGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS 404
G+RPD L+ +L C G +++G+ I +N ++ +VD+ +
Sbjct: 267 FRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA-LVDMYA 325
Query: 405 RAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
+ G ++ A + + + + A W +L+ G ++
Sbjct: 326 KCGCIETALEVFYEIK-ERDTASWTSLIYGLAMN 358
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 158/512 (30%), Positives = 254/512 (49%), Gaps = 42/512 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H+ V G S+ ++ ++L FY D++ LF + +N +I Y+++
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD 330
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
S+ +R+M + F ++ +LS L+ G Q+H L+ S + V
Sbjct: 331 QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN 390
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+L++ YA C F+ A +F +P R VS
Sbjct: 391 SLVDMYA-------------------------------KCEMFEEAELIFKSLPQRTTVS 419
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT +I+G QKG L LF +MR + + L LG+ +H ++
Sbjct: 420 WTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI- 478
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
R+ +V + L+ MYA CG I DA QVF +MP R+ VSW ++I A A G G
Sbjct: 479 ----IRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+ A+G F M+ G ++PD+++++ VL AC H GFV++G F +M+ +GI+P+
Sbjct: 535 EAAIGAFAKMIESG-----LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKK 589
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
+HY CM+DLL R G EA L++ MP +P++ +W ++L C+IHKN LA KL +
Sbjct: 590 KHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 649
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
AA Y V +SNIYA A W+ V V++ M E G+KK P SW+++N +H F +
Sbjct: 650 MEKLRDAAAY-VSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSN 708
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEPDITG 545
D TH + I ++E+ + + Y+PD +
Sbjct: 709 DQTHPNGDEIVRKINELTAEIEREGYKPDTSS 740
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 185/429 (43%), Gaps = 48/429 (11%)
Query: 21 TLLQSCNNI--QNLI-QIHSQVVLNGLSQKT--NIITKLLSFYIASDQLQHAHKLFSTID 75
TLL CN+ QN + Q+H+ V G + LL Y +L A LF I
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ +N +I GY + +S+ + +M + +P+ FT+S +L A V G+Q
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H + + G+ + V +++FY+ V + R
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETR-------------------------- 305
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
+FDEMP + VS+ +I+ +Q + + +L F EM+ +
Sbjct: 306 -----MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L++GR +H Q ++A + + N+L+ MYA C + +A +F +PQR
Sbjct: 361 AANLSSLQMGRQLHC---QALLA--TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+TVSWT++I + ++GL L LF M +R D T VL A +
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRG-----SNLRADQSTFATVLKASASFASLLL 470
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G+++ A + R+ + G +VD+ ++ G + +A + E MP + N W AL+
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAH 528
Query: 436 QIHKNSELA 444
+ + E A
Sbjct: 529 ADNGDGEAA 537
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 17/278 (6%)
Query: 146 CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDE 205
C + F+ +L+ RG V AR V+D M ++ VS N++++G+V GD AR +FD
Sbjct: 49 CRSNFIVEDLLR----RGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDA 104
Query: 206 MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR---VEXXXXXXXXXXXXXXXXGDL 262
MP R VV+WT ++ A+ +A LF +M R+ +
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 263 KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTS 322
+G+ +H + + N P + ++N L+ Y + A +F ++P++ +V++ +
Sbjct: 165 AVGQ-VHAFAVKLGFDTN---PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNT 220
Query: 323 MIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFAS 382
+I + K GL E++ LF M G +P T VL A G+++ A
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGH-----QPSDFTFSGVLKAVVGLHDFALGQQLHA- 274
Query: 383 MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
++ T G S ++D S+ + E L + MP
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 11/226 (4%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
T+L N+ +L Q+H Q +L ++ L+ Y + + A +F ++
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+T W +I GY + ++ + +M + + T++ +L A L G+Q+H
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
++ G NVF + L++ YA G ++ A VF+ M R+ VSWN++++ + GD +
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGE 535
Query: 198 GARRVFDEM------PIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
A F +M P + VS ++ C+ G +Q F M
Sbjct: 536 AAIGAFAKMIESGLQP--DSVSILGVLTACSHCGFVEQGTEYFQAM 579
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/561 (29%), Positives = 281/561 (50%), Gaps = 66/561 (11%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
H+QV+ GL + +++ +LL+ Y + ++ A+ LF + + WN +I+G+++ +
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLL--------------------------------- 121
+V+ + M E +P+ T++ +L
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV 299
Query: 122 --SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
S C L E+VHG V+ G+ + LI+ Y +G V+ A H+F + +
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMP--------IRNVVSWTTMIAGCAQKGRCKQAL 231
+ SWNS++ +V G D A +F E+ NVV+WT++I GC +GR +L
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
F +M+ ++V L LGR IH + V R ++ + NA
Sbjct: 420 EYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGH-----VIRTSMSENILVQNA 474
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
L++MYA CG++ + VF + + +SW S+I + G ++AL +F M+S
Sbjct: 475 LVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMIS-----S 529
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
G PD I L+ VL AC HAG V++GR IF SM++ +G+ P+ EHY C+VDLL R GFL E
Sbjct: 530 GFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKE 589
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIY 471
A +++NMP++P + GALL C++HKN ++A + +L + L+ + Y+ LLSNIY
Sbjct: 590 ASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQL-SVLEPERTGSYM-LLSNIY 647
Query: 472 AFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEII 531
+ RW++ VR + +KK G SWI++ + F +G + IY +L +++
Sbjct: 648 SAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLV 707
Query: 532 KQSHV---------DSYEPDI 543
SH+ ++YE D+
Sbjct: 708 --SHMLKKGPTHDGNNYEDDL 726
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 206/504 (40%), Gaps = 52/504 (10%)
Query: 7 VPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKT-NIITKLLSFYIASDQLQ 65
+ ++ +S+ + LL C Q Q+H+QV+L+ ++ ++ L+S Y L
Sbjct: 47 LTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLL 106
Query: 66 HAHKLFSTIDN---PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
A +F T+ +WN I++ ++E YR M +G+ +L
Sbjct: 107 DARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILR 166
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC G H V+ G N+ V L+ Y G + A ++F M R+ +S
Sbjct: 167 ACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMS 226
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMR 238
WN ++ G+ D + A ++F+ M V+WT++++ +Q G+ + L F MR
Sbjct: 227 WNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
+ L + +H YV + + PS NALIH+Y
Sbjct: 287 MSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKG--GFEEYLPS---RNALIHVYGK 341
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFK----------------- 341
G + DA +F ++ + SW S+I +F G EAL LF
Sbjct: 342 QGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVT 401
Query: 342 -TMVSDGAGVDG----------------VRPDAITLIVVLCACCHAGFVDEGRRIFASMN 384
T V G V G V +++T+ +L C ++ GR I +
Sbjct: 402 WTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVI 461
Query: 385 RTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGCQIHKNSEL 443
RT +S I +V++ ++ G L E + E ++ D + W +++ G +H +E
Sbjct: 462 RT-SMSENILVQNALVNMYAKCGLLSEGSLVFE--AIRDKDLISWNSIIKGYGMHGFAEK 518
Query: 444 A-SVVEPKLVAELDTDGAAGYLVL 466
A S+ + + + DG A VL
Sbjct: 519 ALSMFDRMISSGFHPDGIALVAVL 542
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH V+ +S+ + L++ Y L +F I + WN II+GY
Sbjct: 455 EIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHG 514
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
K++ + +M+S+ P+G +LSAC GL+ +G ++
Sbjct: 515 FAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI 557
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 276/548 (50%), Gaps = 53/548 (9%)
Query: 10 SGRRSIQQHVFTLLQSC----NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
S S Q + LL C +++ + +++H ++ NG Q + TKL+ Y +
Sbjct: 70 SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVD 129
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
+A K+F + VWN + R + + + Y +M E + FTY+++L ACV
Sbjct: 130 YARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
Query: 126 RGGL----LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
L +G+++H + +GY S+V++ T L++ YA G V+ A +VF GM
Sbjct: 190 ASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM------ 243
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
P+RNVVSW+ MIA A+ G+ +AL F EM R
Sbjct: 244 -------------------------PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 242 VEXXXXXXXXXXXXXX--XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
+ L+ G+ IH Y+ +R + P + +AL+ MY C
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR--GLDSILPVI---SALVTMYGRC 333
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G + +VF +M R VSW S+I ++ G GK+A+ +F+ M+++GA P +T
Sbjct: 334 GKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS-----PTPVT 388
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+ VL AC H G V+EG+R+F +M R GI P+IEHY CMVDLL RA LDEA ++++M
Sbjct: 389 FVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
+P +WG+LLG C+IH N ELA +L A L+ A Y VLL++IYA A+ W +
Sbjct: 449 RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFA-LEPKNAGNY-VLLADIYAEAQMWDE 506
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
V V++ + G++K PG+ W+++ ++ FV+ D + I+ L ++ + Y
Sbjct: 507 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGY 566
Query: 540 EPDITGAF 547
P G
Sbjct: 567 IPQTKGVL 574
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 142/339 (41%), Gaps = 45/339 (13%)
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRG 163
+++S E+ P+ TY L+ C L + +VH +L G + F+ T LI Y+ G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQ 223
V+ AR VFD +R++ WN++ G +
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE-------------------------- 160
Query: 224 KGRCKQALSLFGEMRRARVE----XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
+ L L+ +M R VE L G+ IH ++ +R +
Sbjct: 161 -----EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
+ V + L+ MYA G + A VF MP R+ VSW++MI +AK G EAL
Sbjct: 216 H-----VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRT 270
Query: 340 FKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCM 399
F+ M+ + P+++T++ VL AC +++G+ I + R G+ + +
Sbjct: 271 FREMMRE---TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR-GLDSILPVISAL 326
Query: 400 VDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
V + R G L+ + + M + + W +L+ +H
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDR-DVVSWNSLISSYGVH 364
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 272/514 (52%), Gaps = 49/514 (9%)
Query: 24 QSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI----ASDQLQHAHKLFSTIDNPST 79
Q CN ++ + HS +++GL + T I+KLL+ ++ + +A +F +I+ P++
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAE---PNGFTYSFLLSACVRGGLLREGEQV 136
V++ +IR +RS P + + MV E E P+ T+ FL+ AC++ G+Q+
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 137 HGIVLVKG-YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
H V+ G + S+ V+T ++ Y + + + D
Sbjct: 139 HCWVVKNGVFLSDSHVQTGVLRIYV------EDKLLLD---------------------- 170
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
AR+VFDE+P +VV W ++ G + G + L +F EM +E
Sbjct: 171 ---ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTA 227
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
G L G+WIH +V+++ + + V + AL+ MYA CG I A +VF K+ +R
Sbjct: 228 CAQVGALAQGKWIHEFVKKK----SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRR 283
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ SW ++I +A G K+A+ + + + DG++PD++ L+ VL AC H GF++E
Sbjct: 284 NVFSWAALIGGYAAYGYAKKAMTCLERLERE----DGIKPDSVVLLGVLAACAHGGFLEE 339
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
GR + +M + I+P+ EHY C+VDL+ RAG LD+A LIE MP+KP ++WGALL GC
Sbjct: 340 GRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGC 399
Query: 436 QIHKNSELASVVEPKL--VAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
+ HKN EL + L + + + + LV LSNIY +R + VR + + GV+
Sbjct: 400 RTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVR 459
Query: 494 KPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
K PG S ++++G V FV+GD++H + I+ ++
Sbjct: 460 KTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 493
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/505 (31%), Positives = 254/505 (50%), Gaps = 49/505 (9%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQ---LQHAHKLFSTID 75
+ + + ++ + Q H+ ++ GL T +KL++F + + + +AH + + I
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+P+ N +IR YA S TP ++ +R+M+ P+ ++++F+L AC EG Q
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGG------------------------------- 164
+HG+ + G ++VFVE L+N Y GR G
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVY-GRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 165 -VEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQ 223
V++AR +FD M +R+V SWN +++GY + G A+ VFD MP+R+VVSW M+ A
Sbjct: 221 LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAH 280
Query: 224 KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX-XXXGDLKLGRWIHWYVQQRIVARNQQ 282
G + L +F +M E G L G W+H Y+ + +
Sbjct: 281 VGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGI----- 335
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
+ L AL+ MY+ CG I A +VF +R +W S+I + GLGK+AL +F
Sbjct: 336 EIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSE 395
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
MV +G +P+ IT I VL AC H G +D+ R++F M+ + + P IEHYGCMVDL
Sbjct: 396 MV-----YEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDL 450
Query: 403 LSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAG 462
L R G ++EA L+ +P L +LLG C+ E A + +L+ EL+ ++G
Sbjct: 451 LGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLL-ELNLRDSSG 509
Query: 463 YLVLLSNIYAFAKRWQDVIAVRQKM 487
Y +SN+YA RW+ VI R+ M
Sbjct: 510 Y-AQMSNLYASDGRWEKVIDGRRNM 533
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 263/516 (50%), Gaps = 52/516 (10%)
Query: 22 LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+L+SC ++ + Q+H V G + ++T L+S Y + A K+F +NP
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFE--ENPQ 116
Query: 79 TT----VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
++ +N +I GY + + +R+M T + T L+ C L G
Sbjct: 117 SSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGR 176
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
+HG + +GG++ V NS + Y+ CG
Sbjct: 177 SLHGQCV--------------------KGGLDS-----------EVAVLNSFITMYMKCG 205
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
+ RR+FDEMP++ +++W +I+G +Q G L L+ +M+ + V
Sbjct: 206 SVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLS 265
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G K+G + ++V N P+V ++NA I MYA CG + A VF MP
Sbjct: 266 SCAHLGAKKIGHEV-----GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+S VSWT+MI + G+G+ L LF M+ G +RPD ++VL AC H+G D
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG-----IRPDGAVFVMVLSACSHSGLTD 375
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+G +F +M R + + P EHY C+VDLL RAG LDEA IE+MP++P+ A+WGALLG
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C+IHKN ++A + K++ E + + GY VL+SNIY+ +K + + +R M E +K
Sbjct: 436 CKIHKNVDMAELAFAKVI-EFEPNN-IGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRK 493
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
PG S+++ G VH F+AGD +H+ + ++ +L E+
Sbjct: 494 KPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 175/398 (43%), Gaps = 46/398 (11%)
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
S + ++T WN +R A +S+ YR M+ + + P+ F++ F+L +C L
Sbjct: 11 SAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPV 70
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS--WNSILAG 189
G+Q+H V G + FV T LI+ Y G V AR VF+ Q S +S +N++++G
Sbjct: 71 SGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISG 130
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y + A +F M + G ++++ G + V
Sbjct: 131 YTANSKVTDAAYMFRRM---------------KETGVSVDSVTMLGLVPLCTVPEY---- 171
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
L LGR +H + V + N+ I MY CG + ++F
Sbjct: 172 ------------LWLGRSLHGQ-----CVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+MP + ++W ++I +++ GL + L L++ M S GV PD TL+ VL +C H
Sbjct: 215 DEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS-----SGVCPDPFTLVSVLSSCAH 269
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G G + + + G P + + + +R G L +A + + MP+K + W
Sbjct: 270 LGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWT 327
Query: 430 ALLGGCQIHKNSELASVVEPKLVAE-LDTDGAAGYLVL 466
A++G +H E+ ++ ++ + DGA +VL
Sbjct: 328 AMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVL 365
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 258/523 (49%), Gaps = 56/523 (10%)
Query: 21 TLLQSCN---NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
TL +SC+ + +Q+HSQ+ G + T ++ Y ++ A F + +
Sbjct: 83 TLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHR 142
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
S W +I GY R + + + QM
Sbjct: 143 SEVSWTALISGYIRCGELDLASKLFDQM-------------------------------- 170
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
+ +V + +++ + G + AR +FD M ++V++W +++ GY + D D
Sbjct: 171 ------PHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDID 224
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR-RARVEXXXXXXXXXXXXX 256
AR++FD MP RN+VSW TMI G Q + ++ + LF EM+ ++
Sbjct: 225 AARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAI 284
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
G L LG W H +VQ R + V++ A++ MY+ CG I A ++F +MP++
Sbjct: 285 SDTGALSLGEWCHCFVQ-----RKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ 339
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
SW +MI +A G + AL LF TM+ + +PD IT++ V+ AC H G V+EG
Sbjct: 340 VASWNAMIHGYALNGNARAALDLFVTMMIEE------KPDEITMLAVITACNHGGLVEEG 393
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
R+ F M R G++ +IEHYGCMVDLL RAG L EA LI NMP +PN + + L C
Sbjct: 394 RKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACG 452
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
+K+ E A + K V EL+ Y VLL N+YA KRW D V+ M + KK
Sbjct: 453 QYKDIERAERILKKAV-ELEPQNDGNY-VLLRNLYAADKRWDDFGMVKNVMRKNQAKKEV 510
Query: 497 GQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
G S I+IN +V +F++GD TH H I+ +L +++ + + Y
Sbjct: 511 GCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 184/406 (45%), Gaps = 53/406 (13%)
Query: 42 NGLSQKTNIITKLLSFYIASDQLQHAHKLFST-IDNPSTTVWNHIIRGYARSHTPWKSVE 100
+ + I TK L ++ + +A KLF + + N +I+ Y + S
Sbjct: 4 HAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFA 63
Query: 101 CYRQM-VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFY 159
YR + T P+ FT++ L +C + +G Q+H + G+C++++V T +++ Y
Sbjct: 64 LYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMY 123
Query: 160 AGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP-IRNVVSWTTMI 218
A G + AR+ FD M RS VSW ++++GY+ CG+ D A ++FD+MP +++VV + M+
Sbjct: 124 AKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMM 183
Query: 219 AGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVA 278
G + G A LF EM V I W
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTV-------------------------ITW-------- 210
Query: 279 RNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALG 338
+IH Y + I A ++F MP+R+ VSW +MI + + +E +
Sbjct: 211 -----------TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIR 259
Query: 339 LFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGC 398
LF+ M + PD +T++ VL A G + G + R + +++
Sbjct: 260 LFQEM----QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK-KLDKKVKVCTA 314
Query: 399 MVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
++D+ S+ G +++A + + MP K A W A++ G ++ N+ A
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEK-QVASWNAMIHGYALNGNARAA 359
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 258/512 (50%), Gaps = 50/512 (9%)
Query: 31 NLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYA 90
NLI H + NG ++ L++ Y+ + L AH+LF + + W +I Y+
Sbjct: 81 NLICRH--LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138
Query: 91 RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
+ K++E M+ PN +TYS +L +C + + +H ++ +G S+VF
Sbjct: 139 KCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVF 195
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN 210
V + LI+ +A G E A VF DEM +
Sbjct: 196 VRSALIDVFAKLGEPEDALSVF-------------------------------DEMVTGD 224
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
+ W ++I G AQ R AL LF M+RA L+LG H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
+ IV +Q + LNNAL+ MY CG + DA +VF +M +R ++W++MI A+
Sbjct: 285 H----IVKYDQ---DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G +EAL LF+ M S G +P+ IT++ VL AC HAG +++G F SM + +GI
Sbjct: 338 GYSQEALKLFERMKSSGT-----KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
P EHYGCM+DLL +AG LD+A L+ M +P+ W LLG C++ +N LA K
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 452
Query: 451 LVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDF 510
++A LD + A Y LLSNIYA +++W V +R +M + G+KK PG SWI++N +H F
Sbjct: 453 VIA-LDPEDAGTY-TLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510
Query: 511 VAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
+ GD +H + + L+++I + Y P+
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPE 542
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 112/235 (47%), Gaps = 9/235 (3%)
Query: 12 RRSIQQHVFT---LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH 68
R +++ +V+T +L+SCN + ++ +H ++ GL + + L+ + + + A
Sbjct: 155 RDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
+F + VWN II G+A++ ++E +++M T + +L AC
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
LL G Q H V + Y ++ + L++ Y G +E A VF+ M +R V++W+++++
Sbjct: 275 LLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 189 GYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
G G A ++F+ M N ++ ++ C+ G + F M++
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 235/419 (56%), Gaps = 42/419 (10%)
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
+R GE +H +V+ G+ S ++V+ +L++ YA
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYA----------------------------- 34
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
+CGD A +VFD+MP +++V+W ++I G A+ G+ ++AL+L+ EM ++
Sbjct: 35 --NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G L LG+ +H Y+ + + RN +N L+ +YA CG + +A +F
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS-----SNVLLDLYARCGRVEEAKTLF 147
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+M +++VSWTS+I+ A G GKEA+ LFK M S +G+ P IT + +L AC H
Sbjct: 148 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES----TEGLLPCEITFVGILYACSH 203
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G V EG F M + I PRIEH+GCMVDLL+RAG + +A+ I++MP++PN +W
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 263
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
LLG C +H +S+LA +++ +L+ + + Y VLLSN+YA +RW DV +R++M+
Sbjct: 264 TLLGACTVHGDSDLAEFARIQIL-QLEPNHSGDY-VLLSNMYASEQRWSDVQKIRKQMLR 321
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
GVKK PG S +++ VH+F+ GD +H S IY L E+ + + Y P I+ ++
Sbjct: 322 DGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 380
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 100/179 (55%), Gaps = 12/179 (6%)
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
D++LG IH +V R+ + + N+L+H+YA+CG + AY+VF KMP++ V+
Sbjct: 2 ADVRLGETIH-----SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 56
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
W S+I FA+ G +EAL L+ M S G++PD T++ +L AC G + G+R+
Sbjct: 57 WNSVINGFAENGKPEEALALYTEMNS-----KGIKPDGFTIVSLLSACAKIGALTLGKRV 111
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
M + G++ + ++DL +R G ++EA L + M + N W +L+ G ++
Sbjct: 112 HVYMIKV-GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVN 168
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IHS V+ +G + LL Y + A+K+F + WN +I G+A +
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
P +++ Y +M S +P+GFT LLSAC + G L G++VH ++ G N+
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP-----IR 209
L++ YA G VE+A+ +FD M ++ VSW S++ G G A +F M +
Sbjct: 130 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 189
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
+++ ++ C+ G K+ F MR
Sbjct: 190 CEITFVGILYACSHCGMVKEGFEYFRRMRE 219
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ +LL +C I L ++H ++ GL++ + LL Y +++ A LF +
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGE 134
+ ++ W +I G A + +++E ++ M STE P T+ +L AC G+++EG
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 135 QVHGIVLVKGYCSNVFVET--NLINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAGYV 191
+ + + + Y +E +++ A G V++A M Q +VV W ++L
Sbjct: 212 E-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 270
Query: 192 SCGDFDGAR 200
GD D A
Sbjct: 271 VHGDSDLAE 279
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/540 (30%), Positives = 267/540 (49%), Gaps = 51/540 (9%)
Query: 16 QQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLS---FYIASDQLQHAHKLFS 72
H+ +L+ S +L QIH+ ++ L + +++ LS + + ++ ++FS
Sbjct: 11 DDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFS 70
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEP-NGFTYSFLLSACVRGGLLR 131
NP+ + N +IR ++ S TP + +R + + P N + SF L C++ G L
Sbjct: 71 QRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLL 130
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
G Q+HG + G+ S+ + T L++ Y+
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYS------------------------------- 159
Query: 192 SCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR---ARVEXXXXX 248
+C + A +VFDE+P R+ VSW + + + R + L LF +M+ V+
Sbjct: 160 TCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVT 219
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G L G+ +H ++ + N ++ L+N L+ MY+ CG + AYQV
Sbjct: 220 CLLALQACANLGALDFGKQVHDFIDE-----NGLSGALNLSNTLVSMYSRCGSMDKAYQV 274
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F M +R+ VSWT++I A G GKEA+ F M+ G + P+ TL +L AC
Sbjct: 275 FYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG-----ISPEEQTLTGLLSACS 329
Query: 369 HAGFVDEGRRIFASMNR-TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL 427
H+G V EG F M + I P + HYGC+VDLL RA LD+A+ LI++M +KP+ +
Sbjct: 330 HSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTI 389
Query: 428 WGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKM 487
W LLG C++H + EL V L+ EL + A Y++LL N Y+ +W+ V +R M
Sbjct: 390 WRTLLGACRVHGDVELGERVISHLI-ELKAEEAGDYVLLL-NTYSTVGKWEKVTELRSLM 447
Query: 488 IEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
E + PG S I++ G VH+F+ D++H IY++L+EI +Q + Y +IT
Sbjct: 448 KEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSEL 507
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 262/544 (48%), Gaps = 56/544 (10%)
Query: 6 FVPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASD 62
++PA R TLL+ C + LIQ +H+ ++ + + LL+ Y
Sbjct: 55 YIPADRR-----FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
L+ A K+F + W +I GY++ P ++ + QM+ PN FT S ++
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 123 ACV--RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
A R G G Q+HG + G+ SNV V + L++ Y G +
Sbjct: 170 AAAAERRGCC--GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM--------------- 212
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
D A+ VFD + RN VSW +IAG A++ ++AL LF M R
Sbjct: 213 ----------------DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD 256
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
G L+ G+W+H Y+ ++ ++ N L+ MYA G
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYM-----IKSGEKLVAFAGNTLLDMYAKSG 311
Query: 301 VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
I DA ++F ++ +R VSW S++ A+A+ G GKEA+ F+ M G +RP+ I+
Sbjct: 312 SIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-----IRPNEISF 366
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
+ VL AC H+G +DEG + M + GI P HY +VDLL RAG L+ A IE MP
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Query: 421 LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDV 480
++P A+W ALL C++HKN+EL + + V ELD D G V+L NIYA RW D
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYA-AEHVFELDPDDP-GPHVILYNIYASGGRWNDA 483
Query: 481 IAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYE 540
VR+KM E GVKK P SW++I +H FVA D H I E++ + Y
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543
Query: 541 PDIT 544
PD +
Sbjct: 544 PDTS 547
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 249/508 (49%), Gaps = 44/508 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+HS V S++ LL Y L A +F + + S + +I GYAR
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++V+ + +M P+ +T + +L+ C R LL EG++VH + ++FV
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ YA CG A VF EM +++++SW
Sbjct: 438 LMDMYA-------------------------------KCGSMQEAELVFSEMRVKDIISW 466
Query: 215 TTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
T+I G ++ +ALSLF + R GR IH Y+
Sbjct: 467 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
RN + N+L+ MYA CG + A+ +F + + VSWT MI + G G
Sbjct: 527 -----RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 581
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
KEA+ LF M G + D I+ + +L AC H+G VDEG R F M I P +
Sbjct: 582 KEAIALFNQMRQAG-----IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
EHY C+VD+L+R G L +A+ IENMP+ P+ +WGALL GC+IH + +LA V K V
Sbjct: 637 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK-VF 695
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
EL+ + GY VL++NIYA A++W+ V +R+++ + G++K PG SWI+I G V+ FVAG
Sbjct: 696 ELEPEN-TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEP 541
D ++ + I L ++ + + Y P
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSP 782
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 203/438 (46%), Gaps = 55/438 (12%)
Query: 5 RFVPASGRRSIQQHVF-TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIA 60
+ + SG+ I ++LQ C + ++L ++ + + NG +N+ +KL Y
Sbjct: 82 KLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTN 141
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
L+ A ++F + WN ++ A+S S+ +++M+S+ E + +T+S +
Sbjct: 142 CGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV 201
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
+ + GEQ+HG +L G+ V +L+ FY V+ AR VFD M +R V
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGE 236
+SWNSI+ GYVS G + VF +M + ++ + ++ AGCA
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD------------- 308
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
+R+ + LGR +H + +R R N L+ MY
Sbjct: 309 ---SRL-------------------ISLGRAVHSIGVKACFSRED-----RFCNTLLDMY 341
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
+ CG + A VF +M RS VS+TSMI +A++GL EA+ LF+ M +G+ PD
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-----EGISPD 396
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
T+ VL C +DEG+R+ + + I ++D+ ++ G + EA +
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKEN-DLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 417 ENMPLKPNDALWGALLGG 434
M +K + W ++GG
Sbjct: 456 SEMRVK-DIISWNTIIGG 472
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++H + N L + L+ Y +Q A +FS + WN II GY+++
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 94 TPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+++ + ++ + P+ T + +L AC +G ++HG ++ GY S+ V
Sbjct: 478 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 537
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV- 211
+L++ YA G + A +FD + + +VSW ++AGY G A +F++M +
Sbjct: 538 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 212 ---VSWTTMIAGCAQKGRCKQALSLFGEMR 238
+S+ +++ C+ G + F MR
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/534 (30%), Positives = 263/534 (49%), Gaps = 48/534 (8%)
Query: 17 QHVFT-LLQSCNNIQ--NLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
+H F LL++ ++ N Q H+ +V GL + L+S Y +S A +LF
Sbjct: 104 RHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDG 163
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
++ W +I G+ R+ + +++ + +M T N T +L A + +R G
Sbjct: 164 AEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFG 223
Query: 134 EQVHGIVLVKGYCS-NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
VHG+ L G +VF+ ++L++ Y G S
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMY-----------------------------GKCS 254
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
C +D A++VFDEMP RNVV+WT +IAG Q + + +F EM ++ V
Sbjct: 255 C--YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G L GR +H Y+ +N + + LI +Y CG + +A VF ++
Sbjct: 313 LSACAHVGALHRGRRVHCYM-----IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL 367
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
+++ +WT+MI FA G ++A LF TM+S V P+ +T + VL AC H G
Sbjct: 368 HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSH-----VSPNEVTFMAVLSACAHGGL 422
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
V+EGRR+F SM + + P+ +HY CMVDL R G L+EA LIE MP++P + +WGAL
Sbjct: 423 VEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
G C +HK+ EL +++ +G LL+N+Y+ ++ W +V VR++M + V
Sbjct: 483 GSCLLHKDYELGKYAASRVIKL--QPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQV 540
Query: 493 KKPPGQSWIQINGVVHDFVA-GDMTHKHSYFIYEILSEIIKQSHVDSYEPDITG 545
K PG SWI++ G + +F+A D S +Y+ L + Q + D+T
Sbjct: 541 VKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDELEDVTA 594
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 257/493 (52%), Gaps = 16/493 (3%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV-STEAEP 112
+++ ++ Q+ A F + WN +I G+ + ++++ + +M+ + P
Sbjct: 218 MIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP 277
Query: 113 NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVF 172
+ FT + +LSAC L G+Q+H ++ G+ + V LI+ Y+ GGVE AR +
Sbjct: 278 DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
Query: 173 DGMGQRS--VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA 230
+ G + + + ++L GY+ GD + A+ +F + R+VV+WT MI G Q G +A
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEA 397
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNN 290
++LF M L G+ IH ++ + SV ++N
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA-----VKSGEIYSVSVSN 452
Query: 291 ALIHMYASCGVIGDAYQVFTKMP-QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
ALI MYA G I A + F + +R TVSWTSMI+A A+ G +EAL LF+TM+
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML----- 507
Query: 350 VDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
++G+RPD IT + V AC HAG V++GR+ F M I P + HY CMVDL RAG L
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 410 DEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSN 469
EA IE MP++P+ WG+LL C++HKN +L V +L+ L+ + + Y L+N
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL-LEPENSGAYSA-LAN 625
Query: 470 IYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSE 529
+Y+ +W++ +R+ M + VKK G SWI++ VH F D TH IY + +
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK 685
Query: 530 IIKQSHVDSYEPD 542
I + Y PD
Sbjct: 686 IWDEIKKMGYVPD 698
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 214/515 (41%), Gaps = 88/515 (17%)
Query: 21 TLLQSCNNI-QNLIQ----------IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK 69
TLL+ C N+ Q + +H +V+ +GL ++ L++ Y + HA K
Sbjct: 11 TLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARK 70
Query: 70 LFSTIDNPSTTVWNHIIRGYA-----------------RSHTPW--------------KS 98
LF + + WN ++ Y+ R W K+
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKA 130
Query: 99 VECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINF 158
+ MV EP FT + +L++ + G++VH ++ G NV V +L+N
Sbjct: 131 IRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNM 190
Query: 159 YAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMI 218
YA G A+ VFD M R + SWN+++A ++ G D A F++M R++V+W +MI
Sbjct: 191 YAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMI 250
Query: 219 AGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
+G Q+G +AL +F +M R + + L +G+ IH IV
Sbjct: 251 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH----SHIV 306
Query: 278 ARNQQQPSVRLNNALIHMYASCG------------------------------VIGD--- 304
+ L NALI MY+ CG +GD
Sbjct: 307 TTGFDISGIVL-NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQ 365
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A +F + R V+WT+MI+ + + G EA+ LF++MV G RP++ TL +L
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-----RPNSYTLAAML 420
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPN 424
+ G++I S ++ I + ++ + ++AG + A + + + +
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERD 479
Query: 425 DALWGALLGGCQIHKNSELA-SVVEPKLVAELDTD 458
W +++ H ++E A + E L+ L D
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 258/520 (49%), Gaps = 49/520 (9%)
Query: 13 RSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLL---SFYIASDQLQHAHK 69
+S + L+ C++I++L+QIH Q+ L+ L + II++L+ S +A D L A
Sbjct: 10 KSRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKD-LAFART 68
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
L + + + WN + RGY+ S +P +S+ Y +M +PN T+ FLL AC
Sbjct: 69 LLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLG 128
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
L G Q+ VL G+ +V+V NLI+ Y
Sbjct: 129 LTAGRQIQVEVLKHGFDFDVYVGNNLIHLYG----------------------------- 159
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
+C AR+VFDEM RNVVSW +++ + G+ F EM R
Sbjct: 160 --TCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRF--CPDET 215
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G+L LG+ +H V R + N RL AL+ MYA G + A VF
Sbjct: 216 TMVVLLSACGGNLSLGKLVHSQVMVRELELN-----CRLGTALVDMYAKSGGLEYARLVF 270
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+M ++ +W++MI+ A+ G +EAL LF M+ + + VRP+ +T + VLCAC H
Sbjct: 271 ERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESS----VRPNYVTFLGVLCACSH 326
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G VD+G + F M + I P + HYG MVD+L RAG L+EA+ I+ MP +P+ +W
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWR 386
Query: 430 ALLGGCQIHKNSELASVVE--PKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKM 487
LL C IH + + + E K + EL+ +G LV+++N +A A+ W + VR+ M
Sbjct: 387 TLLSACSIHHDEDDEGIGEKVKKRLIELEPK-RSGNLVIVANRFAEARMWAEAAEVRRVM 445
Query: 488 IEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
E +KK G+S +++ G H F +G IYE+L
Sbjct: 446 KETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELL 485
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 261/523 (49%), Gaps = 55/523 (10%)
Query: 23 LQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
+++C+++ ++ Q H Q + G + + L+ Y +L+ A K+F I +
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY------SFLLSACVRGGLLREG 133
W +IRGY + +V ++ ++ E + + + ++SAC R
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYA--GRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
E +H V+ +G+ V V L++ YA G GGV AR
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVAR---------------------- 240
Query: 192 SCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV-EXXXXXXX 250
++FD++ ++ VS+ ++++ AQ G +A +F + + +V
Sbjct: 241 ---------KIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLS 291
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
G L++G+ IH V R + V + ++I MY CG + A + F
Sbjct: 292 TVLLAVSHSGALRIGKCIH-----DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFD 346
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+M ++ SWT+MI + G +AL LF M+ G VRP+ IT + VL AC HA
Sbjct: 347 RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-----VRPNYITFVSVLAACSHA 401
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G EG R F +M +G+ P +EHYGCMVDLL RAGFL +A+ LI+ M +KP+ +W +
Sbjct: 402 GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSS 461
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
LL C+IHKN ELA + +L ELD+ GY +LLS+IYA A RW+DV VR M
Sbjct: 462 LLAACRIHKNVELAEISVARLF-ELDSSN-CGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 491 GVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
G+ KPPG S +++NG VH F+ GD H IYE L+E+ ++
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 182/426 (42%), Gaps = 68/426 (15%)
Query: 63 QLQHAHKLFST-IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
+ Q+ LF+ +D WN +I ARS +++ + M P ++ +
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
AC + G+Q H V GY S++FV + LI Y+ G +E AR VFD + +R++V
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 182 SWNSILAGYVSCGDFDGARRVF----------DEMPIRNVVSWTTMIAGCAQ---KGRCK 228
SW S++ GY G+ A +F D+ + + ++I+ C++ KG
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG--- 200
Query: 229 QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRL 288
L IH +V +R R V +
Sbjct: 201 -----------------------------------LTESIHSFVIKRGFDRG-----VSV 220
Query: 289 NNALIHMYASCGV--IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
N L+ YA G + A ++F ++ + VS+ S++ +A+ G+ EA +F+ +V +
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
V +AITL VL A H+G + G+ I + R G+ + ++D+ +
Sbjct: 281 KV----VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIIDMYCKC 335
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVL 466
G ++ A + M K N W A++ G +H ++ A + P ++ D+ Y+
Sbjct: 336 GRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAAKALELFPAMI---DSGVRPNYITF 391
Query: 467 LSNIYA 472
+S + A
Sbjct: 392 VSVLAA 397
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 242/516 (46%), Gaps = 44/516 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH + +G NI T L+ Y L+ A +LF + + WN +I Y ++
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P +++ +++M+ +P + L AC G L G +H + + G NV
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV---- 372
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
SVV NS+++ Y C + D A +F ++ R +VS
Sbjct: 373 -------------------------SVV--NSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W MI G AQ GR AL+ F +MR V+ +WIH V
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + +N V + AL+ MYA CG I A +F M +R +W +MI + G G
Sbjct: 466 RSCLDKN-----VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
K AL LF+ M ++P+ +T + V+ AC H+G V+ G + F M + I +
Sbjct: 521 KAALELFEEMQKGT-----IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
+HYG MVDLL RAG L+EA I MP+KP ++GA+LG CQIHKN A +L
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLF- 634
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
EL+ D GY VLL+NIY A W+ V VR M+ G++K PG S ++I VH F +G
Sbjct: 635 ELNPDD-GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSG 693
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFLG 549
H S IY L ++I Y PD T LG
Sbjct: 694 STAHPDSKKIYAFLEKLICHIKEAGYVPD-TNLVLG 728
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 186/380 (48%), Gaps = 47/380 (12%)
Query: 2 LIER-FVPASGRRSIQQH-VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI 59
L ER ++PA+ + +H LL+ C++++ L QI V NGL Q+ TKL+S +
Sbjct: 25 LSERNYIPAN----VYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC 80
Query: 60 ASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSF 119
+ A ++F ID+ +++ +++G+A+ K+++ + +M + EP + +++
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
LL C LR G+++HG+++ G+ ++F T L N YA
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA------------------- 181
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
C + AR+VFD MP R++VSW T++AG +Q G + AL + M
Sbjct: 182 ------------KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
++ + +G+ IH Y R+ V ++ AL+ MYA C
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM-----RSGFDSLVNISTALVDMYAKC 284
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G + A Q+F M +R+ VSW SMI A+ + KEA+ +F+ M+ +GV+P ++
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-----EGVKPTDVS 339
Query: 360 LIVVLCACCHAGFVDEGRRI 379
++ L AC G ++ GR I
Sbjct: 340 VMGALHACADLGDLERGRFI 359
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSF 57
MLI + + G + V L +C ++ +L + IH V GL + +++ L+S
Sbjct: 322 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 381
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
Y ++ A +F + + + WN +I G+A++ P ++ + QM S +P+ FTY
Sbjct: 382 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 118 SFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ 177
+++A + + +HG+V+ NVFV T L++ YA G + AR +FD M +
Sbjct: 442 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 501
Query: 178 RSVVSWNSILAGYVSCGDFDGARRVFDEM---PIR-NVVSWTTMIAGCAQKGRCKQALSL 233
R V +WN+++ GY + G A +F+EM I+ N V++ ++I+ C+ G + L
Sbjct: 502 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 561
Query: 234 FGEMRR 239
F M+
Sbjct: 562 FYMMKE 567
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 12/261 (4%)
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
G D A RVF+ + + V + TM+ G A+ +AL F MR VE
Sbjct: 83 GSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL 142
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
+L++G+ IH ++ ++ + L +MYA C + +A +VF +MP
Sbjct: 143 KVCGDEAELRVGKEIHG-----LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+R VSW +++ +++ G+ + AL + K+M + ++P IT++ VL A +
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCE-----ENLKPSFITIVSVLPAVSALRLI 252
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
G+ I R+ G + +VD+ ++ G L+ A L + M L+ N W +++
Sbjct: 253 SVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMID 310
Query: 434 GCQIHKNSELASVVEPKLVAE 454
++N + A ++ K++ E
Sbjct: 311 AYVQNENPKEAMLIFQKMLDE 331
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 250/527 (47%), Gaps = 49/527 (9%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ +L + +Q L +QIHS G ++T +S Y +++ LF
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR 283
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
P +N +I GY + S+ +++++ + A T L+S G L
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST---LVSLVPVSGHLMLIYA 340
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+HG L + S+ V T L Y+ +E
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIE----------------------------- 371
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
AR++FDE P +++ SW MI+G Q G + A+SLF EM+++
Sbjct: 372 --SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
G L LG+W+H +V + S+ ++ ALI MYA CG I +A ++F M ++
Sbjct: 430 CAQLGALSLGKWVH-----DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ V+W +MI + G G+EAL +F M++ G + P +T + VL AC HAG V E
Sbjct: 485 NEVTWNTMISGYGLHGQGQEALNIFYEMLNSG-----ITPTPVTFLCVLYACSHAGLVKE 539
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G IF SM +G P ++HY CMVD+L RAG L A IE M ++P ++W LLG C
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
+IHK++ LA V KL ELD D GY VLLSNI++ + + VRQ + + K
Sbjct: 600 RIHKDTNLARTVSEKLF-ELDPDN-VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKA 657
Query: 496 PGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
PG + I+I H F +GD +H IYE L ++ + Y+P+
Sbjct: 658 PGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPE 704
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 4/232 (1%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK 69
SG R + +L+ ++ + IH + + ++ T L + Y ++++ A K
Sbjct: 316 SGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARK 375
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
LF S WN +I GY ++ ++ +R+M +E PN T + +LSAC + G
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGA 435
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
L G+ VH +V + S+++V T LI YA G + +AR +FD M +++ V+WN++++G
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISG 495
Query: 190 YVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEM 237
Y G A +F EM + V++ ++ C+ G K+ +F M
Sbjct: 496 YGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 36/328 (10%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
+ +I +L Q H+Q++L+G +++TKL + +A +F ++ P +
Sbjct: 26 FFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFL 85
Query: 82 WNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
+N ++RG++ + +P S+ + + ST+ +PN TY+F +SA R G +HG
Sbjct: 86 FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
+V G S + + +N++ Y VE AR VFD M ++ + WN++++GY R
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY---------R 196
Query: 201 RVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
+ +EM + ++ + +I + L + + +
Sbjct: 197 K--NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ------------------- 235
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
+L+LG IH + + + I +Y+ CG I +F + + V++
Sbjct: 236 ELRLGMQIH-----SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAY 290
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGA 348
+MI + G + +L LFK ++ GA
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGA 318
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 127/311 (40%), Gaps = 43/311 (13%)
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
Q H +++ G+ +++ + T L + G + AR +F + + V +N ++ G+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFS--- 94
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR-VEXXXXXXXXXX 253
+E P +LS+F +R++ ++
Sbjct: 95 --------VNESP--------------------HSSLSVFAHLRKSTDLKPNSSTYAFAI 126
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
D + GR IH Q +V + + L + ++ MY + DA +VF +MP
Sbjct: 127 SAASGFRDDRAGRVIHG---QAVV--DGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP 181
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
++ T+ W +MI + K + E++ +F+ ++++ R D TL+ +L A +
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLINESC----TRLDTTTLLDILPAVAELQEL 237
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
G +I + +T S G + L S+ G + L KP+ + A++
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTG-FISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIH 295
Query: 434 GCQIHKNSELA 444
G + +EL+
Sbjct: 296 GYTSNGETELS 306
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 224/404 (55%), Gaps = 10/404 (2%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
L++C+N L QIH++++ + L+ ++ +L+S + + Q+A +F+ + +PST
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFT 85
Query: 82 WNHIIRGYARSHTPWKSVECY-RQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
WN +IR + +H P +++ + M+S +++ + FT+ F++ AC+ +R G QVHG+
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
+ G+ ++VF + L++ Y G + R VFD M RS+VSW ++L G VS D A
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 201 RVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
VF++MP+RNVVSWT MI + R +A LF M+ V+ G
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
L +GRW+H Y +N L ALI MY+ CG + DA +VF M +S +W
Sbjct: 266 SLSMGRWVHDYAH-----KNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
SMI + G G+EAL LF+ M + + V PDAIT + VL AC + G V +G R F
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEAS----VEPDAITFVGVLSACANTGNVKDGLRYF 376
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPN 424
M + +GISP EH CM+ LL +A +++A L+E+M P+
Sbjct: 377 TRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 252/487 (51%), Gaps = 10/487 (2%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
I++ + LL N L +IH+ ++ + L ++ +S + +A+++FS I
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHI 62
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
NP+ V+N +I+ Y+ P +S+ + M S + +TY+ LL +C LR G+
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK 122
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
VHG ++ G+ + ++ Y G + A+ VFD M +R+VV WN ++ G+ G
Sbjct: 123 CVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSG 182
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
D + +F +M R++VSW +MI+ ++ GR ++AL LF EM +
Sbjct: 183 DVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLP 242
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G L G+WIH + + ++ + + NAL+ Y G + A +F KM +
Sbjct: 243 ISASLGVLDTGKWIHSTAESSGLFKD----FITVGNALVDFYCKSGDLEAATAIFRKMQR 298
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R+ VSW ++I A G G+ + LF M+ +G V P+ T + VL C + G V+
Sbjct: 299 RNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGK----VAPNEATFLGVLACCSYTGQVE 354
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G +F M + + R EHYG MVDL+SR+G + EA ++NMP+ N A+WG+LL
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C+ H + +LA V +LV G +G VLLSN+YA RWQDV VR M + ++K
Sbjct: 415 CRSHGDVKLAEVAAMELVK--IEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRK 472
Query: 495 PPGQSWI 501
GQS I
Sbjct: 473 STGQSTI 479
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 262/494 (53%), Gaps = 24/494 (4%)
Query: 44 LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYR 103
+++ N I +L+ +I SD +++AHK+F I +I + + ++ + ++
Sbjct: 24 VTKSPNSIPELVK-HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFK 82
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRG 163
+++ PN FT+ ++ + ++ G+Q+H L G SNVFV + ++N Y
Sbjct: 83 RLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLS 142
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQ 223
+ AR FD +VVS ++++GY+ +F+ A +F MP R+VV+W +I G +Q
Sbjct: 143 TLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQ 202
Query: 224 KGRCKQALSLFGEMRRARV----EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
GR ++A++ F +M R V E G G+ IH + + R
Sbjct: 203 TGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHG---AGKSIHACAIKFLGKR 259
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP--QRSTVSWTSMIMAFAKQGLGKEAL 337
+V + N+LI Y+ CG + D+ F K+ QR+ VSW SMI +A G G+EA+
Sbjct: 260 ----FNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAV 315
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP---RIE 394
+F+ MV D +RP+ +T++ VL AC HAG + EG F + P +E
Sbjct: 316 AMFEKMVKDT----NLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELE 370
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY CMVD+LSR+G EA LI++MPL P W ALLGGCQIH N LA + K++ E
Sbjct: 371 HYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKIL-E 429
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
LD + Y V+LSN Y+ + WQ+V +R+KM E G+K+ G SWI++ + FV D
Sbjct: 430 LDPRDVSSY-VMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNAD 488
Query: 515 MTHKHSYFIYEILS 528
++ +Y +L+
Sbjct: 489 KNNELKDEVYRMLA 502
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 16/214 (7%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H + GL+ + + +L+ Y+ L A + F +P+ ++I GY + H
Sbjct: 114 QLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKH 173
Query: 94 TPWKSVECYRQM-----VSTEAEPNGFTYSFLLSACVRG--GLLREGEQVHGIVLVKGYC 146
+++ +R M V+ A GF+ + V +LREG V++
Sbjct: 174 EFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREG------VVIPNES 227
Query: 147 SNVFVETNLINFYAGRGGVEQARHVFDGMGQR-SVVSWNSILAGYVSCGDFDGARRVFD- 204
+ T + N + G +G+R +V WNS+++ Y CG+ + + F+
Sbjct: 228 TFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNK 287
Query: 205 -EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
E RN+VSW +MI G A GR ++A+++F +M
Sbjct: 288 LEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM 321
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 260/541 (48%), Gaps = 53/541 (9%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYI---ASDQ 63
SG S + + ++ +C ++NL Q+HS + +GL ++ L+ Y A
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSADGS 320
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARS-HTPWKSVECYRQMVST-EAEPNGFTYSFLL 121
+ K+F +++ S W +I GY ++ + +++ + +M++ EPN FT+S
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
AC R G+QV G +G SN V
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVA----------------------------- 411
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
NS+++ +V + A+R F+ + +N+VS+ T + G + +QA L E+
Sbjct: 412 --NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
+ G ++ G IH V + ++ NQ + NALI MY+ CG
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP-----VCNALISMYSKCGS 524
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
I A +VF M R+ +SWTSMI FAK G L F M+ +G V+P+ +T +
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG-----VKPNEVTYV 579
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
+L AC H G V EG R F SM I P++EHY CMVDLL RAG L +A I MP
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF 639
Query: 422 KPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVI 481
+ + +W LG C++H N+EL + K++ ELD + A Y + LSNIYA A +W++
Sbjct: 640 QADVLVWRTFLGACRVHSNTELGKLAARKIL-ELDPNEPAAY-IQLSNIYACAGKWEEST 697
Query: 482 AVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
+R+KM E + K G SWI++ +H F GD H +++ IY+ L +I + Y P
Sbjct: 698 EMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVP 757
Query: 542 D 542
D
Sbjct: 758 D 758
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 190/458 (41%), Gaps = 61/458 (13%)
Query: 11 GRRSIQQHVFT-LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
G R + F+ LL+SC ++ +H++++ + + + L+S Y S
Sbjct: 56 GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAK 115
Query: 67 AHKLFSTID---NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSA 123
A +F T+ W+ ++ Y + +++ + + + PN + Y+ ++ A
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA 175
Query: 124 CVRGGLLREGEQVHGIVLVKG-YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
C + G G ++ G + S+V V +LI+ + G+ S
Sbjct: 176 CSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK--------------GENS--- 218
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
F+ A +VFD+M NVV+WT MI C Q G ++A+ F +M +
Sbjct: 219 -------------FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF 265
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIH-WYVQQRIVARNQQQPSVRLNNALIHMYASC-- 299
E +L LG+ +H W ++ +V + +L+ MYA C
Sbjct: 266 ESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD--------DVECSLVDMYAKCSA 317
Query: 300 -GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ-GLGKEALGLFKTMVSDGAGVDGVRPDA 357
G + D +VF +M S +SWT++I + K L EA+ LF M++ G V P+
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH----VEPNH 373
Query: 358 ITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
T AC + G+++ + G++ ++ + ++ +++A E
Sbjct: 374 FTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 418 NMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAEL 455
++ K N + L G + N E A KL++E+
Sbjct: 433 SLSEK-NLVSYNTFLDGTCRNLNFEQAF----KLLSEI 465
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 264 bits (675), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 270/542 (49%), Gaps = 26/542 (4%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFST 73
+Q +F + C + + ++ V + +S K + + LL Y L+ ++ S
Sbjct: 153 VQGSMFHMYMRCGRMGD-----ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSE 207
Query: 74 IDN----PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
+++ + WN I+ G+ RS ++V ++++ P+ T S +L + +
Sbjct: 208 MESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
L G +HG V+ +G + V + +I+ Y G V +F+ N+ + G
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 190 YVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
G D A +F+ + NVVSWT++IAGCAQ G+ +AL LF EM+ A V+
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
L GR H + R +V + +ALI MYA CG I +
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFA-----VRVHLLDNVHVGSALIDMYAKCGRINLS 442
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
VF MP ++ V W S++ F+ G KE + +F++++ ++PD I+ +L
Sbjct: 443 QIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR-----LKPDFISFTSLLS 497
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC G DEG + F M+ +GI PR+EHY CMV+LL RAG L EA+ LI+ MP +P+
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDS 557
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQ 485
+WGALL C++ N +LA + KL L+ + Y VLLSNIYA W +V ++R
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAEKLF-HLEPENPGTY-VLLSNIYAAKGMWTEVDSIRN 615
Query: 486 KMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITG 545
KM +G+KK PG SWIQ+ V+ +AGD +H I E + EI K+ + P++
Sbjct: 616 KMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDF 675
Query: 546 AF 547
A
Sbjct: 676 AL 677
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 201/466 (43%), Gaps = 54/466 (11%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q H++++ +G I KL++ Y + A + +I +P+ ++ +I ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+S+ + +M S P+ L C + G+Q+H + V G + FV+
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR---- 209
++ + Y G + AR VFD M + VV+ +++L Y G + R+ EM
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
N+VSW +++G + G K+A+ +F ++ L +GR IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 270 WYVQQRIVARNQQQPSVRLN--------------------------NALIHMYASCGVIG 303
YV ++ + +++ S ++ NA I + G++
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 304 DAYQVFTKMPQRS----TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
A ++F +++ VSWTS+I A+ G EAL LF+ M V GV+P+ +T
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-----QVAGVKPNHVT 390
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE-----HYG-CMVDLLSRAGFLDEAH 413
+ +L AC + + GR T G + R+ H G ++D+ ++ G ++ +
Sbjct: 391 IPSMLPACGNIAALGHGR-------STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQ 443
Query: 414 GLIENMPLKPNDALWGALLGGCQIH-KNSELASVVEPKLVAELDTD 458
+ MP K N W +L+ G +H K E+ S+ E + L D
Sbjct: 444 IVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 254/519 (48%), Gaps = 50/519 (9%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L SC ++ L Q+H+ + L + + L+ Y D L A K+F
Sbjct: 355 SILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA 414
Query: 78 STTVWNHIIRGYARSHTPWK---SVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
++N +I GY+R T W+ ++ +R M P+ T+ LL A L +
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
Q+HG++ G ++F + LI+ Y+ +C
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYS-------------------------------NCY 503
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
+R VFDEM ++++V W +M AG Q+ ++AL+LF E++ +R
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
++LG+ H + +R + N + NAL+ MYA CG DA++ F
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPY-----ITNALLDMYAKCGSPEDAHKAFDSAAS 618
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R V W S+I ++A G GK+AL + + M+S+G + P+ IT + VL AC HAG V+
Sbjct: 619 RDVVCWNSVISSYANHGEGKKALQMLEKMMSEG-----IEPNYITFVGVLSACSHAGLVE 673
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+G + F M R +GI P EHY CMV LL RAG L++A LIE MP KP +W +LL G
Sbjct: 674 DGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C N ELA +A L +G +LSNIYA W + VR++M GV K
Sbjct: 733 CAKAGNVELAE--HAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVK 790
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
PG+SWI IN VH F++ D +H + IYE+L +++ Q
Sbjct: 791 EPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQ 829
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 182/431 (42%), Gaps = 52/431 (12%)
Query: 21 TLLQSCNNIQN-----LIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ +Q+C+ + + Q+ S +V +G + + T L+ FY+ + +A +F +
Sbjct: 151 SFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP 210
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
ST W +I G + + S++ + Q++ P+G+ S +LSAC L G+Q
Sbjct: 211 EKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQ 270
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H +L G + + LI+ Y G V A +F+GM ++++SW ++L+GY
Sbjct: 271 IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGY----- 325
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
Q K+A+ LF M + ++
Sbjct: 326 --------------------------KQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L G +H Y + + + + N+LI MYA C + DA +VF
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSY-----VTNSLIDMYAKCDCLTDARKVFDIFAAA 414
Query: 316 STVSWTSMIMAFAKQGLG---KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
V + +MI +++ G EAL +F+ M +RP +T + +L A
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDM-----RFRLIRPSLLTFVSLLRASASLTS 469
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
+ ++I M + +G++ I ++D+ S L ++ + + M +K + +W ++
Sbjct: 470 LGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMF 527
Query: 433 GG-CQIHKNSE 442
G Q +N E
Sbjct: 528 AGYVQQSENEE 538
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 51/346 (14%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H Q+++ GL T + L++ Y + + +A K+F + + W+ ++
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 95 PWKSVECYRQMVSTEAE-PNGFTYSFLLSACVRGGLLREGE----QVHGIVLVKGYCSNV 149
+S+ + + T + PN + S + AC GL G Q+ ++ G+ +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 150 FVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR 209
+V T LI+FY G + D AR VFD +P +
Sbjct: 184 YVGTLLIDFYLKDGNI-------------------------------DYARLVFDALPEK 212
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
+ V+WTTMI+GC + GR +L LF ++ V L+ G+ IH
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
+ + R + L N LI Y CG + A+++F MP ++ +SWT+++ + +
Sbjct: 273 AH-----ILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPD--AITLIVVLCACCHA-GF 372
L KEA+ LF +M G++PD A + I+ CA HA GF
Sbjct: 328 NALHKEAMELFTSMSK-----FGLKPDMYACSSILTSCASLHALGF 368
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 146/328 (44%), Gaps = 43/328 (13%)
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
++ LL LL VHG ++V G + ++ LIN Y+ GG+ V+
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGM-----VY---- 97
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
AR+VF++MP RN+VSW+TM++ C G +++L +F E
Sbjct: 98 ----------------------ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
R R + D + GRW+ + +Q +V ++ V + LI Y
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGR-GRWMVFQLQSFLV-KSGFDRDVYVGTLLIDFY 193
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
G I A VF +P++STV+WT+MI K G +L LF ++ D V PD
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN-----VVPD 248
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
L VL AC F++ G++I A + R +G+ ++D + G + AH L
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 417 ENMPLKPNDALWGALLGGCQ---IHKNS 441
MP K N W LL G + +HK +
Sbjct: 308 NGMPNK-NIISWTTLLSGYKQNALHKEA 334
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 240/468 (51%), Gaps = 43/468 (9%)
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
W+ I GYA+ ++++ RQM+S+ +PN T +LS C G L G+++H
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH--- 388
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
YA + ++ + +G G ++V N ++ Y C D AR
Sbjct: 389 -----------------CYAIKYPIDLRK---NGHGDENMV-INQLIDMYAKCKKVDTAR 427
Query: 201 RVFDEMPI--RNVVSWTTMIAGCAQKGRCKQALSLFGEM--RRARVEXXXXXXXXXXXXX 256
+FD + R+VV+WT MI G +Q G +AL L EM +
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQP-SVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L++G+ IH Y RNQQ + ++N LI MYA CG I DA VF M +
Sbjct: 488 ASLAALRIGKQIHAYA-----LRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ V+WTS++ + G G+EALG+F M G +DGV TL+VVL AC H+G +D+
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV-----TLLVVLYACSHSGMIDQ 597
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G F M +G+SP EHY C+VDLL RAG L+ A LIE MP++P +W A L C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
+IH EL K + EL ++ Y LLSN+YA A RW+DV +R M GVKK
Sbjct: 658 RIHGKVELGEYAAEK-ITELASNHDGSY-TLLSNLYANAGRWKDVTRIRSLMRHKGVKKR 715
Query: 496 PGQSWIQ-INGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
PG SW++ I G FV GD TH H+ IY++L + +++ Y P+
Sbjct: 716 PGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLLDHMQRIKDIGYVPE 762
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 192/418 (45%), Gaps = 13/418 (3%)
Query: 36 HSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTP 95
H+ ++ G + L++ Y L A K+F + WN II YA+ P
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 96 WKSVECYRQMVST-EAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++E + +M + P+ T +L C G G+Q+H + N+FV
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----N 210
L++ YA G +++A VF M + VVSWN+++AGY G F+ A R+F++M +
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
VV+W+ I+G AQ+G +AL + +M + ++ G L G+ IH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 271 YVQQRIVA--RNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM--PQRSTVSWTSMIMA 326
Y + + +N + N LI MYA C + A +F + +R V+WT MI
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
+++ G +AL L M + RP+A T+ L AC + G++I A R
Sbjct: 450 YSQHGDANKALELLSEMFEEDC---QTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
+ + C++D+ ++ G + +A + +NM K N+ W +L+ G +H E A
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK-NEVTWTSLMTGYGMHGYGEEA 563
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 192/473 (40%), Gaps = 97/473 (20%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
+ C I + IH +++ G+ N+ + L+S YI+ L HA L V
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGV 92
Query: 82 --WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
WN +IR Y + K + + M S P+ +T+ F+ AC +R GE H +
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
LV G+ SNVFV L+ Y+ + AR VFD M VVSWNSI+ Y G A
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212
Query: 200 RRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
+F M + ++ ++ CA
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCAS------------------------------- 241
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G LG+ +H + + +N + + N L+ MYA CG++ +A VF+ M
Sbjct: 242 ----LGTHSLGKQLHCFAVTSEMIQN-----MFVGNCLVDMYAKCGMMDEANTVFSNMSV 292
Query: 315 RSTVSWTSM-----------------------------------IMAFAKQGLGKEALGL 339
+ VSW +M I +A++GLG EALG+
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 340 FKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG-- 397
+ M+S G++P+ +TLI VL C G + G+ I + + I R +G
Sbjct: 353 CRQMLS-----SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK-YPIDLRKNGHGDE 406
Query: 398 -----CMVDLLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGCQIHKNSELA 444
++D+ ++ +D A + +++ K D + W ++GG H ++ A
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 243/479 (50%), Gaps = 43/479 (8%)
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
++F + +N II GYA+S ++ R+M +T+ +P+ FT S +L
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
+ +G+++HG V+ KG S+V++ ++L++ YA +E +
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE------------------- 297
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
RVF + R+ +SW +++AG Q GR +AL LF +M A+V+
Sbjct: 298 ------------RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
L LG+ +H YV + N + + +AL+ MY+ CG I A ++
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSN-----IFIASALVDMYSKCGNIKAARKI 400
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F +M VSWT++IM A G G EA+ LF+ M G V+P+ + + VL AC
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG-----VKPNQVAFVAVLTACS 455
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
H G VDE F SM + +G++ +EHY + DLL RAG L+EA+ I M ++P ++W
Sbjct: 456 HVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVW 515
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
LL C +HKN ELA V K+ +D++ Y VL+ N+YA RW+++ +R +M
Sbjct: 516 STLLSSCSVHKNLELAEKVAEKIFT-VDSENMGAY-VLMCNMYASNGRWKEMAKLRLRMR 573
Query: 489 EMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
+ G++K P SWI++ H FV+GD +H I E L +++Q + Y D +G
Sbjct: 574 KKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVL 632
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 191/411 (46%), Gaps = 20/411 (4%)
Query: 34 QIHSQVV-LNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
Q+H+Q + LS + I ++S Y L A LF T+ +P W +IR +
Sbjct: 26 QLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
K++ + +M ++ P+ + +L +C LR GE VHG ++ G +++
Sbjct: 84 SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143
Query: 153 TNLINFYA---GRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF--DGARRVFDEMP 207
L+N YA G G +VFD M QR+ S + + F D RRVF+ MP
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
++VVS+ T+IAG AQ G + AL + EM ++ D+ G+
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
IH Y V R V + ++L+ MYA I D+ +VF+++ R +SW S++ +
Sbjct: 264 IHGY-----VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
+ G EAL LF+ MV+ V+P A+ V+ AC H + G+++ + R
Sbjct: 319 VQNGRYNEALRLFRQMVT-----AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG- 372
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
G I +VD+ S+ G + A + + M + ++ W A++ G +H
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALH 422
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 4/210 (1%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH V+ G+ I + L+ Y S +++ + ++FS + WN ++ GY ++
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+++ +RQMV+ + +P +S ++ AC L G+Q+HG VL G+ SN+F+ +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR---- 209
L++ Y+ G ++ AR +FD M VSW +I+ G+ G A +F+EM +
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
N V++ ++ C+ G +A F M +
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTK 472
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 235/480 (48%), Gaps = 47/480 (9%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+HS + GL + +I L+ Y Q+ +A KLF I T WN +I GY+ +
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+++ +R+M EP+ T +L AC G LR G + + + K + F+ +
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
LI+ Y CGD D ARRVF++M ++ V+W
Sbjct: 274 LISMYG-------------------------------KCGDLDSARRVFNQMIKKDRVAW 302
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
T MI +Q G+ +A LF EM + V G L+LG+ I + +
Sbjct: 303 TAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASE 362
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
+ N + + L+ MY CG + +A +VF MP ++ +W +MI A+A QG K
Sbjct: 363 LSLQHN-----IYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAK 417
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EAL LF M V P IT I VL AC HAG V +G R F M+ +G+ P+IE
Sbjct: 418 EALLLFDRM--------SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIE 469
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEP-KLVA 453
HY ++DLLSRAG LDEA +E P KP++ + A+LG C HK ++A + +++
Sbjct: 470 HYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGAC--HKRKDVAIREKAMRMLM 527
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
E+ AG V+ SN+ A K W + +R M + GV K PG SWI+I G + +F+AG
Sbjct: 528 EMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 194/422 (45%), Gaps = 48/422 (11%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
R +++ LL+ C ++ L QI +Q++L+ + + +I K + ++ LF
Sbjct: 33 RGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLF 88
Query: 72 STIDNPSTTVWNHIIRGYARS-HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLL 130
S + P+ +N++IRG + + ++ YR+M + +P+ FTY+F+ AC + +
Sbjct: 89 SVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEI 148
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
G VH + G +V + +LI YA G V AR +FD + +R VSWNS+++GY
Sbjct: 149 GVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGY 208
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
++ G K A+ LF +M E
Sbjct: 209 -------------------------------SEAGYAKDAMDLFRKMEEEGFEPDERTLV 237
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
GDL+ GR + + + + S L + LI MY CG + A +VF
Sbjct: 238 SMLGACSHLGDLRTGRLL-----EEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFN 292
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+M ++ V+WT+MI +++ G EA LF M GV PDA TL VL AC
Sbjct: 293 QMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK-----TGVSPDAGTLSTVLSACGSV 347
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G ++ G++I + + I +VD+ + G ++EA + E MP+K N+A W A
Sbjct: 348 GALELGKQI-ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNA 405
Query: 431 LL 432
++
Sbjct: 406 MI 407
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 4/237 (1%)
Query: 5 RFVPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIAS 61
R + G ++ + ++L +C+++ +L + + + T + +KL+S Y
Sbjct: 222 RKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKC 281
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
L A ++F+ + W +I Y+++ ++ + + +M T P+ T S +L
Sbjct: 282 GDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVL 341
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
SAC G L G+Q+ N++V T L++ Y G VE+A VF+ M ++
Sbjct: 342 SACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA 401
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPI-RNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+WN+++ Y G A +FD M + + +++ +++ C G Q F EM
Sbjct: 402 TWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEM 458
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/617 (28%), Positives = 277/617 (44%), Gaps = 89/617 (14%)
Query: 5 RFVPASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIAS 61
R + SG ++ + LLQ C+N + QIH V+ GL ++ L+ Y +
Sbjct: 78 REMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRN 137
Query: 62 DQLQHAHKLFSTIDN-----------------------------------PSTTVWNHII 86
+L+ + K+F+++ + P WN ++
Sbjct: 138 GKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLL 197
Query: 87 RGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYC 146
GYA ++ ++M +P+ + S LL A G L+ G+ +HG +L
Sbjct: 198 SGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLW 257
Query: 147 SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG----------------- 189
+V+VET LI+ Y G + AR VFD M +++V+WNS+++G
Sbjct: 258 YDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRM 317
Query: 190 ------------------YVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRC 227
Y + G + A V +M + NVVSWT + +GC++ G
Sbjct: 318 EKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNF 377
Query: 228 KQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVR 287
+ AL +F +M+ V L G+ +H + R
Sbjct: 378 RNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC-----LRKNLICDAY 432
Query: 288 LNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
+ AL+ MY G + A ++F + +S SW M+M +A G G+E + F M+ G
Sbjct: 433 VATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAG 492
Query: 348 AGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAG 407
+ PDAIT VL C ++G V EG + F M +GI P IEH CMVDLL R+G
Sbjct: 493 -----MEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 408 FLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLL 467
+LDEA I+ M LKP+ +WGA L C+IH++ ELA + +L L+ +A Y++++
Sbjct: 548 YLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQV-LEPHNSANYMMMI 606
Query: 468 SNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
N+Y+ RW+DV +R M V+ SWIQI+ VH F A TH IY L
Sbjct: 607 -NLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665
Query: 528 SEIIKQSHVDSYEPDIT 544
+++ + Y PD +
Sbjct: 666 YKLVSEMKKSGYVPDTS 682
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 188/413 (45%), Gaps = 21/413 (5%)
Query: 33 IQIHSQVVLNGL-SQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYAR 91
+ IH ++ GL + T +++ + FY L A+KLF + WN I+ R
Sbjct: 7 LTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLR 66
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
S K+VE +R+M + A+ T LL C EG Q+HG VL G SNV +
Sbjct: 67 SGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI--- 208
+LI Y+ G +E +R VF+ M R++ SWNSIL+ Y G D A + DEM I
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 209 -RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
++V+W ++++G A KG K A+++ M+ A ++ G LKLG+
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
IH Y + RNQ V + LI MY G + A VF M ++ V+W S++
Sbjct: 247 IHGY-----ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
+ L K+A L M +G++PDAIT + G ++ + M
Sbjct: 302 SYACLLKDAEALMIRMEK-----EGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK- 355
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALLG--GC 435
G++P + + + S+ G A + M + PN A LL GC
Sbjct: 356 GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGC 408
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 56/277 (20%)
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
R++ + ++ R R+ +A + Y C +G A ++F +MP+R ++W ++M
Sbjct: 3 RFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVM 62
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
+ G ++A+ LF+ M GA + T++ +L C + EGR+I + R
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGA-----KAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR 117
Query: 386 TWGISPRIEHYGCMVDLLSR-------------------------------AGFLDEAHG 414
G+ + ++ + SR G++D+A G
Sbjct: 118 L-GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIG 176
Query: 415 LIENMP---LKPNDALWGALLGGCQIHKNSELASVVEPKL-VAELDTDGAA--------- 461
L++ M LKP+ W +LL G S+ A V ++ +A L ++
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 462 --GYLVLLSNIYAFAKR---WQDVIAVRQKMIEMGVK 493
G+L L I+ + R W DV V +I+M +K
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVY-VETTLIDMYIK 272
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 250/507 (49%), Gaps = 61/507 (12%)
Query: 9 ASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH 68
S S L+ C ++QNL QIH+Q++ GLS T ++KLL ++ L +A
Sbjct: 2 TSPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLS-STVCLSYAL 60
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKS---VECYRQMVSTEAE---PNGFTYSFLLS 122
+ I NPS ++N +I +H ++ Y Q++S+ + PN FTY L
Sbjct: 61 SILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFK 120
Query: 123 AC-VRGGLLREGEQVHGIVL--VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
A R G +H VL ++ + FV+ L+ FYA G + +AR +F+ + +
Sbjct: 121 ASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPD 180
Query: 180 VVSWNSILAGYVSCGDFDGARRV---FDEMPIR-NVVSWTTMIAGCAQKGRCKQALSLFG 235
+ +WN++LA Y + + D V F M +R N +S +I CA G
Sbjct: 181 LATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCAN----------LG 230
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
E R G W H YV + + NQ + +LI +
Sbjct: 231 EFVR-------------------------GVWAHVYVLKNNLTLNQ-----FVGTSLIDL 260
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y+ CG + A +VF +M QR + +MI A G G+E + L+K+++S G + P
Sbjct: 261 YSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQG-----LVP 315
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
D+ T +V + AC H+G VDEG +IF SM +GI P++EHYGC+VDLL R+G L+EA
Sbjct: 316 DSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEEC 375
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK 475
I+ MP+KPN LW + LG Q H + E + L+ L+ + + Y VLLSNIYA
Sbjct: 376 IKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLG-LEFENSGNY-VLLSNIYAGVN 433
Query: 476 RWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
RW DV R+ M + V K PG S +
Sbjct: 434 RWTDVEKTRELMKDHRVNKSPGISTLN 460
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/509 (30%), Positives = 251/509 (49%), Gaps = 45/509 (8%)
Query: 37 SQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTP 95
++ V GL + ++ L+ +A ++ A +LF ++ S + W +I+G A++
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLA 251
Query: 96 WKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNL 155
+++EC+R+M + + + + +L AC G + EG+Q+H ++ + +++V + L
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 156 INFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWT 215
I+ Y C A+ VFD M +NVVSWT
Sbjct: 312 IDMYC-------------------------------KCKCLHYAKTVFDRMKQKNVVSWT 340
Query: 216 TMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR 275
M+ G Q GR ++A+ +F +M+R+ ++ L+ G H
Sbjct: 341 AMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS 400
Query: 276 IVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKE 335
+ V ++N+L+ +Y CG I D+ ++F +M R VSWT+M+ A+A+ G E
Sbjct: 401 GLIH-----YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 336 ALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEH 395
+ LF MV G ++PD +TL V+ AC AG V++G+R F M +GI P I H
Sbjct: 456 TIQLFDKMVQHG-----LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 396 YGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAEL 455
Y CM+DL SR+G L+EA I MP P+ W LL C+ N E+ L+ EL
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLI-EL 569
Query: 456 DTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDM 515
D AGY LLS+IYA +W V +R+ M E VKK PGQSWI+ G +H F A D
Sbjct: 570 DPHHPAGY-TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDE 628
Query: 516 THKHSYFIYEILSEIIKQSHVDSYEPDIT 544
+ + IY L E+ + + Y+PD +
Sbjct: 629 SSPYLDQIYAKLEELNNKIIDNGYKPDTS 657
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 188/409 (45%), Gaps = 17/409 (4%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVST-EAEP 112
LL Y + + F + + WN +I GY+ S +V+ Y M+ A
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137
Query: 113 NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVF 172
T +L G + G+Q+HG V+ G+ S + V + L+ YA G + A+ VF
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 173 DGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALS 232
G+ R+ V +NS++ G ++CG + A ++F M ++ VSW MI G AQ G K+A+
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
F EM+ ++ G + G+ IH + R Q + + +AL
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIH-----ACIIRTNFQDHIYVGSAL 311
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
I MY C + A VF +M Q++ VSWT+M++ + + G +EA+ +F M G
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR-----SG 366
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
+ PD TL + AC + ++EG + F T G+ + +V L + G +D++
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 413 HGLIENMPLKPNDAL-WGALLGG-CQIHKNSELASVVEPKLVAELDTDG 459
L M ++ DA+ W A++ Q + E + + + L DG
Sbjct: 426 TRLFNEMNVR--DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG 472
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 144/348 (41%), Gaps = 38/348 (10%)
Query: 117 YSFLLSACVRGGLLREG---EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
YS + C+ G + + +HG ++ F+ N+++ YA AR VFD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
+ Q ++ SWN++L Y G F+++P R+ V+W +I G + G A+
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 234 FGEMRRA-RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV-------------------- 272
+ M R G + LG+ IH V
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 273 ------QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
+ V + + N+L+ +CG+I DA Q+F M ++ +VSW +MI
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKG 244
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
A+ GL KEA+ F+ M V G++ D VL AC G ++EG++I A + RT
Sbjct: 245 LAQNGLAKEAIECFREM-----KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
I ++D+ + L A + + M K N W A++ G
Sbjct: 300 -NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVG 345
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 7/240 (2%)
Query: 5 RFVPASGRRSIQQHVFTLLQSCNN---IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS 61
R + G + Q ++L +C I QIH+ ++ + + L+ Y
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
L +A +F + + W ++ GY ++ ++V+ + M + +P+ +T +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
SAC L EG Q HG + G V V +L+ Y G ++ + +F+ M R V
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEM 237
SW ++++ Y G ++FD+M + V+ T +I+ C++ G ++ F M
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 166/540 (30%), Positives = 258/540 (47%), Gaps = 47/540 (8%)
Query: 9 ASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
ASG + TLL+S N + L QIH+ V+ GL T+I T +++ Y+ L
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A ++F + ++ GY ++ +++ + +V+ E + F +S +L AC
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
L G+Q+H V G S V V T L++FY
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFY-------------------------- 330
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
+ C F+ A R F E+ N VSW+ +I+G Q + ++A+ F +R
Sbjct: 331 -----IKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL 385
Query: 246 XXXXXXXXXXX-XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
D +G +H +R + +Q S ALI MY+ CG + D
Sbjct: 386 NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES-----ALITMYSKCGCLDD 440
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A +VF M V+WT+ I A G EAL LF+ MVS G ++P+++T I VL
Sbjct: 441 ANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG-----MKPNSVTFIAVL 495
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPN 424
AC HAG V++G+ +M R + ++P I+HY CM+D+ +R+G LDEA ++NMP +P+
Sbjct: 496 TACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPD 555
Query: 425 DALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVR 484
W L GC HKN EL + +L +LD + AGY VL N+Y +A +W++ +
Sbjct: 556 AMSWKCFLSGCWTHKNLELGEIAGEEL-RQLDPEDTAGY-VLPFNLYTWAGKWEEAAEMM 613
Query: 485 QKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
+ M E +KK SWIQ G +H F+ GD H + IYE L E D ++ ++T
Sbjct: 614 KLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMT 673
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 186/437 (42%), Gaps = 49/437 (11%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L ++C +++L +H ++ + + + +L Y L+ A KLF + +
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN 148
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
+I YA K+V + M+++ +P Y+ LL + V L G Q+H
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V+ G CSN +ET ++N Y V CG G
Sbjct: 209 HVIRAGLCSNTSIETGIVNMY-------------------------------VKCGWLVG 237
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
A+RVFD+M ++ V+ T ++ G Q GR + AL LF ++ VE
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
+L LG+ IH VA+ + V + L+ Y C A + F ++ + + V
Sbjct: 298 LEELNLGKQIH-----ACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 352
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
SW+++I + + +EA+ FK++ S A + ++ T + AC + G +
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASI----LNSFTYTSIFQACSVLADCNIGGQ 408
Query: 379 IFASMNRTWGISPRIEHYG--CMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
+ A + I + YG ++ + S+ G LD+A+ + E+M P+ W A + G
Sbjct: 409 VHADAIKRSLIGSQ---YGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHA 464
Query: 437 IHKNSELASVVEPKLVA 453
+ N+ A + K+V+
Sbjct: 465 YYGNASEALRLFEKMVS 481
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 16/234 (6%)
Query: 226 RCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPS 285
+ +A EM +A V L GR +H ++ I + PS
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGI-----ENPS 117
Query: 286 VRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVS 345
V L N ++ MY C + DA ++F +M + + VS T+MI A+A+QG+ +A+GLF M++
Sbjct: 118 VLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 346 DGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSR 405
G +P + +L + + +D GR+I A + R G+ +V++ +
Sbjct: 178 SGD-----KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRA-GLCSNTSIETGIVNMYVK 231
Query: 406 AGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDG 459
G+L A + + M +K A G ++G Q + + KL +L T+G
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDAL-----KLFVDLVTEG 280
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 252/529 (47%), Gaps = 59/529 (11%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFSTIDNPS 78
T++Q C + + Q+ S + G Q + + ++LL S L A ++F I P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTE------AEPNGFTYSFLLSACVRGGLLRE 132
T WN IIRG+A S P + YR M+ + T SF L AC R
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
+Q+H + +G ++ + T L++ Y+ G
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNG----------------------------- 158
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
D A ++FDEMP+R+V SW +IAG R +A+ L+ M +
Sbjct: 159 --DLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAA 216
Query: 253 XXXXXXXGDLKLGRWI-HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
GD+K G I H Y ++ ++NA I MY+ CG + AYQVF +
Sbjct: 217 LGACSHLGDVKEGENIFHGYSNDNVI----------VSNAAIDMYSKCGFVDKAYQVFEQ 266
Query: 312 MP-QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
++S V+W +MI FA G AL +F + +G ++PD ++ + L AC HA
Sbjct: 267 FTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG-----IKPDDVSYLAALTACRHA 321
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G V+ G +F +M G+ ++HYGC+VDLLSRAG L EAH +I +M + P+ LW +
Sbjct: 322 GLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQS 380
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
LLG +I+ + E+A + + + E+ + G VLLSN+YA RW+DV VR M
Sbjct: 381 LLGASEIYSDVEMAEIA-SREIKEMGVNN-DGDFVLLSNVYAAQGRWKDVGRVRDDMESK 438
Query: 491 GVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
VKK PG S+I+ G +H+F D +H+ IYE + EI + D Y
Sbjct: 439 QVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGY 487
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 262/549 (47%), Gaps = 53/549 (9%)
Query: 3 IERFVPASGRRSIQQHVFTLLQSCNNIQNLI------QIHSQVVLNGLSQKTNIITKLLS 56
+ER+ + R I FTL+ S ++ +L QIH + + G+ ++ L++
Sbjct: 400 VERY-KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMT 458
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPW-KSVECYRQMVSTEAEPNGF 115
Y + L K+FS++ WN II ARS ++V C+ + N
Sbjct: 459 LYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRI 518
Query: 116 TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
T+S +LSA G+Q+HG+ L E
Sbjct: 519 TFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE----------------------- 555
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-NVVSWTTMIAGCAQKGRCKQALSLF 234
N+++A Y CG+ DG ++F M R + V+W +MI+G +AL L
Sbjct: 556 --------NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLV 607
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
M + L+ G +H R + V + +AL+
Sbjct: 608 WFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH-----ACSVRACLESDVVVGSALVD 662
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MY+ CG + A + F MP R++ SW SMI +A+ G G+EAL LF+TM DG
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ----TP 718
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
PD +T + VL AC HAG ++EG + F SM+ ++G++PRIEH+ CM D+L RAG LD+
Sbjct: 719 PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLED 778
Query: 415 LIENMPLKPNDALWGALLGGC--QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYA 472
IE MP+KPN +W +LG C + +EL +++ +L+ + A Y VLL N+YA
Sbjct: 779 FIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKA-AEMLFQLEPENAVNY-VLLGNMYA 836
Query: 473 FAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIK 532
RW+D++ R+KM + VKK G SW+ + VH FVAGD +H + IY+ L E+ +
Sbjct: 837 AGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNR 896
Query: 533 QSHVDSYEP 541
+ Y P
Sbjct: 897 KMRDAGYVP 905
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 165/379 (43%), Gaps = 40/379 (10%)
Query: 71 FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY-SFLLSAC-VRGG 128
F I+ ++ WN II Y+++ + + M + P +T+ S + +AC +
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEP 222
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
+R EQ+ + G +++FV + L++ +A G + AR VF+ M R+ V+ N ++
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMV 282
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
G V + A ++F +M VS + + LS F E A
Sbjct: 283 GLVRQKWGEEATKLFMDMNSMIDVSPESYVI----------LLSSFPEYSLAE------- 325
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
LK GR +H +V + V + N L++MYA CG I DA +V
Sbjct: 326 ----------EVGLKKGREVHGHV----ITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F M + +VSW SMI + G EA+ +K+M + P + TLI L +C
Sbjct: 372 FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-----HDILPGSFTLISSLSSCA 426
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
+ G++I + GI + ++ L + G+L+E + +MP + + W
Sbjct: 427 SLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSW 484
Query: 429 GALLGGCQIHKNSELASVV 447
+++G + S +VV
Sbjct: 485 NSIIGALARSERSLPEAVV 503
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 178/428 (41%), Gaps = 52/428 (12%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIR 87
+++ L QI + +GL + + L+S + S L +A K+F+ ++ + N ++
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMV 282
Query: 88 GYARSHTPWKSVECYRQMVST-EAEPNGFTYSFLLSACVRGGL-----LREGEQVHGIVL 141
G R ++ + + M S + P +Y LLS+ L L++G +VHG V+
Sbjct: 283 GLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVI 340
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
G L++F G G N ++ Y CG ARR
Sbjct: 341 TTG----------LVDFMVGIG--------------------NGLVNMYAKCGSIADARR 370
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD 261
VF M ++ VSW +MI G Q G +A+ + MRR +
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 262 LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWT 321
KLG+ IH + + N V ++NAL+ +YA G + + ++F+ MP+ VSW
Sbjct: 431 AKLGQQIHGESLKLGIDLN-----VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN 485
Query: 322 SMIMAFAKQGLG-KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
S+I A A+ EA+ F A G + + IT VL A F + G++I
Sbjct: 486 SIIGALARSERSLPEAVVCFLN-----AQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
+ I+ ++ + G +D + M + ++ W +++ G IH N
Sbjct: 541 GLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG-YIH-N 597
Query: 441 SELASVVE 448
LA ++
Sbjct: 598 ELLAKALD 605
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 20/307 (6%)
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
+ V N+++ Y+ GD AR+VFDEMP+RN VSW +++G ++ G K+AL +
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKL--GRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
M + + G + + GR IH + + A + ++N LI
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD-----AVVSNVLIS 147
Query: 295 MYASC-GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
MY C G +G A F + +++VSW S+I +++ G + A +F +M DG+
Sbjct: 148 MYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS----- 202
Query: 354 RPDAITLIVVLCACCHAGFVDEG--RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
RP T ++ C D +I ++ ++ ++ G +V +++G L
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSG-LVSAFAKSGSLSY 261
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNI- 470
A + M + L G ++G + K E A+ + + + +D + Y++LLS+
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVR-QKWGEEATKLFMDMNSMIDVSPES-YVILLSSFP 319
Query: 471 -YAFAKR 476
Y+ A+
Sbjct: 320 EYSLAEE 326
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 134/330 (40%), Gaps = 38/330 (11%)
Query: 20 FTLLQSCNNIQNLIQI-HSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ +QSC + + HS++ N L + + L++ Y+ + A K+F + +
Sbjct: 7 LSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL--LREGEQV 136
W I+ GY+R+ +++ R MV N + + +L AC G + G Q+
Sbjct: 67 CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 137 HGIVLVKGYCSNVFVETNLINFY-AGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
HG++ Y + V LI+ Y G V A F + ++ VSWNSI++ Y GD
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
A R+F M Q + FG +
Sbjct: 187 QRSAFRIFSSM----------------QYDGSRPTEYTFGSL-------------VTTAC 217
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
D++L I +Q+ + + + + + L+ +A G + A +VF +M R
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTD-----LFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVS 345
+ V+ +++ +Q G+EA LF M S
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 279 RNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALG 338
+N+ V L N LI+ Y G A +VF +MP R+ VSW ++ +++ G KEAL
Sbjct: 29 KNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALV 88
Query: 339 LFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+ MV +G+ + + VL AC G V
Sbjct: 89 FLRDMVK-----EGIFSNQYAFVSVLRACQEIGSV 118
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 248/503 (49%), Gaps = 52/503 (10%)
Query: 12 RRSIQQHVFT---LLQSCNNIQNLIQ----IHSQVVLNGLSQKTNIITKLLSFYIASDQL 64
R+ FT +L++C+ +++ IQ +H VV G + T LL Y+ ++
Sbjct: 100 RKGYSPDYFTFPYVLKACSGLRD-IQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEV 158
Query: 65 QHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC 124
+ ++F I + W +I G+ ++ ++E +R+M S + N LL AC
Sbjct: 159 NYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC 218
Query: 125 VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWN 184
R + G+ HG F G G FD Q S V +N
Sbjct: 219 GRCKDIVTGKWFHG-------------------FLQGLG--------FDPYFQ-SKVGFN 250
Query: 185 SILAG-----YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
ILA Y CGD AR +FD MP R +VSW ++I G +Q G ++AL +F +M
Sbjct: 251 VILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLD 310
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
+ G +LG+ IH YV + ++ + AL++MYA
Sbjct: 311 LGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAA-----IVCALVNMYAKT 365
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G A + F + ++ T++WT +I+ A G G EAL +F+ M G PD IT
Sbjct: 366 GDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNAT----PDGIT 421
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+ VL AC H G V+EG+R FA M G+ P +EHYGCMVD+LSRAG +EA L++ M
Sbjct: 422 YLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTM 481
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
P+KPN +WGALL GC IH+N EL + +VAE + G +G VLLSNIYA A RW D
Sbjct: 482 PVKPNVNIWGALLNGCDIHENLELTDRIR-SMVAEPEELG-SGIYVLLSNIYAKAGRWAD 539
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQ 502
V +R+ M V K G S ++
Sbjct: 540 VKLIRESMKSKRVDKVLGHSSVE 562
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 203/427 (47%), Gaps = 46/427 (10%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQ---LQHAHKLFSTID 75
+ + L++C ++ L Q+H ++ + + + +++L+ F + L +A +F +ID
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID 68
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
PS +WN +IRGY+ S P K++ Y++M+ P+ FT+ ++L AC ++ G
Sbjct: 69 CPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
VHG V+ G+ N++V T L++ Y G V VF+ + Q +VV+W S+++G+V+
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 196 FDGARRVFDEMPIRNV-VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
F A F EM V + T M+ GRCK
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCK-------------------------- 222
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQP---SVRLNNALIHMYASCGVIGDAYQVFTK 311
D+ G+W H ++Q Q +V L +LI MYA CG + A +F
Sbjct: 223 ------DIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDG 276
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
MP+R+ VSW S+I +++ G +EAL +F M+ G+ PD +T + V+ A G
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLD-----LGIAPDKVTFLSVIRASMIQG 331
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
G+ I A +++T G +V++ ++ G + A E++ K A W +
Sbjct: 332 CSQLGQSIHAYVSKT-GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIA-WTVV 389
Query: 432 LGGCQIH 438
+ G H
Sbjct: 390 IIGLASH 396
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 23/278 (8%)
Query: 178 RSVVSWNSILAGYVSCGD---FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF 234
R+V+ + ++ +C + AR VF+ + +V W +MI G + +AL +
Sbjct: 36 RNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFY 95
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
EM R D++ G +H + V + + ++ ++ L+H
Sbjct: 96 QEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGF-----VVKTGFEVNMYVSTCLLH 150
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MY CG + +VF +PQ + V+W S+I F +A+ F+ M S +GV+
Sbjct: 151 MYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS-----NGVK 205
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHY--------GCMVDLLSRA 406
+ ++ +L AC + G+ F + G P + ++D+ ++
Sbjct: 206 ANETIMVDLLVACGRCKDIVTGKW-FHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKC 264
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
G L A L + MP + + W +++ G + ++E A
Sbjct: 265 GDLRTARYLFDGMPERTLVS-WNSIITGYSQNGDAEEA 301
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/504 (30%), Positives = 242/504 (48%), Gaps = 53/504 (10%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
IH+ V+ G + ++ L Y+ + + A KLFS ++ W +I GY +
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P K+++ YR M +P+ T + +LSAC G L G ++H + + S V V
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
NLIN Y+ C D A +F +P +NV+S
Sbjct: 438 NLINMYS-------------------------------KCKCIDKALDIFHNIPRKNVIS 466
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT++IAG RC +AL +M+ ++ G L G+ IH +V
Sbjct: 467 WTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVL 525
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ V + P NAL+ MY CG + A+ F ++ SW ++ ++++G G
Sbjct: 526 RTGVGLDDFLP-----NALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQG 579
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+ LF MV VRPD IT I +LC C + V +G F+ M +G++P +
Sbjct: 580 SMVVELFDRMVKSR-----VRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNL 633
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
+HY C+VDLL RAG L EAH I+ MP+ P+ A+WGALL C+IH +L + + +
Sbjct: 634 KHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE-LSAQHIF 692
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
ELD + GY +LL N+YA +W++V VR+ M E G+ G SW+++ G VH F++
Sbjct: 693 ELDKK-SVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSD 751
Query: 514 DMTHKHSYFI-------YEILSEI 530
D H + I YE +SE+
Sbjct: 752 DKYHPQTKEINTVLEGFYEKMSEV 775
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 197/438 (44%), Gaps = 60/438 (13%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKL----LSFYIASDQLQHA 67
R ++ + VF L + + S+V LS +++ +L L+ ++ L A
Sbjct: 89 RVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDA 148
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVR 126
+F + + WN ++ GYA+ +++ Y +M+ +P+ +T+ +L C
Sbjct: 149 WYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTC-- 206
Query: 127 GGL--LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWN 184
GG+ L G++VH V+ GY ++ V N
Sbjct: 207 GGIPDLARGKEVHVHVVRYGYELDIDVV-------------------------------N 235
Query: 185 SILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEX 244
+++ YV CGD AR +FD MP R+++SW MI+G + G C + L LF MR V+
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
GD +LGR IH YV A + + + N+L MY + G +
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD-----ISVCNSLTQMYLNAGSWRE 350
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A ++F++M ++ VSWT+MI + L +A+ ++ M D V+PD IT+ VL
Sbjct: 351 AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMM-----DQDSVKPDEITVAAVL 405
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHY----GCMVDLLSRAGFLDEAHGLIENMP 420
AC G +D G + I R+ Y ++++ S+ +D+A + N+P
Sbjct: 406 SACATLGDLDTGVEL-----HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 421 LKPNDALWGALLGGCQIH 438
K N W +++ G +++
Sbjct: 461 RK-NVISWTSIIAGLRLN 477
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 25/224 (11%)
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR-- 275
+ G G+ ++A+ L M+ RV + L R W Q
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVF------------VALVRLCEWKRAQEEG 113
Query: 276 -----IVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
I + V L NA + M+ G + DA+ VF KM +R+ SW ++ +AKQ
Sbjct: 114 SKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQ 173
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G EA+ L+ M+ V GV+PD T VL C + G+ + + R +G
Sbjct: 174 GYFDEAMCLYHRML----WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYE 228
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
I+ ++ + + G + A L + MP + + W A++ G
Sbjct: 229 LDIDVVNALITMYVKCGDVKSARLLFDRMP-RRDIISWNAMISG 271
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 259/513 (50%), Gaps = 45/513 (8%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVW 82
++SC +I+ +H +VV + + I +L+ Y+ A KLF + W
Sbjct: 41 VKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSW 100
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEA--EPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
N +I GY+ K E +M+ +E PN T+ ++SACV GG EG +HG+V
Sbjct: 101 NSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLV 160
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
+ G V V IN+Y GD +
Sbjct: 161 MKFGVLEEVKVVNAFINWYG-------------------------------KTGDLTSSC 189
Query: 201 RVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
++F+++ I+N+VSW TMI Q G ++ L+ F RR E G
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMG 249
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
++L + IH + + N+ + AL+ +Y+ G + D+ VF ++ +++W
Sbjct: 250 VVRLAQGIHGLIMFGGFSGNKC-----ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAW 304
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
T+M+ A+A G G++A+ F+ MV G + PD +T +L AC H+G V+EG+ F
Sbjct: 305 TAMLAAYATHGFGRDAIKHFELMVHYG-----ISPDHVTFTHLLNACSHSGLVEEGKHYF 359
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
+M++ + I PR++HY CMVDLL R+G L +A+GLI+ MP++P+ +WGALLG C+++K+
Sbjct: 360 ETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 419
Query: 441 SELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
++L + +L EL+ Y V+LSNIY+ + W+D +R M + G+ + G S+
Sbjct: 420 TQLGTKAAERLF-ELEPRDGRNY-VMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSY 477
Query: 501 IQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
I+ +H FV GD +H S I + L EI K+
Sbjct: 478 IEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKK 510
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/510 (30%), Positives = 251/510 (49%), Gaps = 46/510 (9%)
Query: 34 QIHSQVV-LNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
Q+H + +N +S + + T L+ Y + ++ A LF N WN ++ GY +S
Sbjct: 438 QVHVHAIKINNVSD-SFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
H K+++ + M + FT + + C + +G+QVH + GY +++V
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
+ +++ Y V CGD A+ FD +P+ + V
Sbjct: 556 SGILDMY-------------------------------VKCGDMSAAQFAFDSIPVPDDV 584
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
+WTTMI+GC + G ++A +F +MR V L+ GR IH
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH--- 641
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+ P V +L+ MYA CG I DAY +F ++ + +W +M++ A+ G
Sbjct: 642 ANALKLNCTNDPFV--GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
GKE L LFK M S G ++PD +T I VL AC H+G V E + SM+ +GI P
Sbjct: 700 GKETLQLFKQMKSLG-----IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
IEHY C+ D L RAG + +A LIE+M ++ + +++ LL C++ ++E V KL+
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL 814
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
EL+ ++ Y VLLSN+YA A +W ++ R M VKK PG SWI++ +H FV
Sbjct: 815 -ELEPLDSSAY-VLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVV 872
Query: 513 GDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
D +++ + IY + ++I+ + Y P+
Sbjct: 873 DDRSNRQTELIYRKVKDMIRDIKQEGYVPE 902
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 172/448 (38%), Gaps = 67/448 (14%)
Query: 36 HSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS--- 92
H++++ + + +I L+S Y L +A ++F + + WN I+ YA+S
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 93 --HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
++ +R + + T S +L C+ G + E HG G + F
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG---------------- 194
V L+N Y G V++ + +F+ M R VV WN +L Y+ G
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 195 -----------------DFD-GARRVF----DEMPIRNVVSWTTMIAGCAQKGRCKQALS 232
D D G + F D + ++ ++ G+ L
Sbjct: 242 LNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLK 301
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
F +M + VE L LG+ +H + + + ++N+L
Sbjct: 302 CFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC-----MALKLGLDLMLTVSNSL 356
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
I+MY G A VF M +R +SW S+I A+ GL EA+ LF ++ G
Sbjct: 357 INMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-----CG 411
Query: 353 VRPDAITLIVVLCACCHAGFVDEG----RRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
++PD T+ VL A A + EG +++ + +S ++D SR
Sbjct: 412 LKPDQYTMTSVLKA---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTA-LIDAYSRNRC 467
Query: 409 LDEAHGLIE--NMPLKPNDALWGALLGG 434
+ EA L E N L W A++ G
Sbjct: 468 MKEAEILFERHNFDL----VAWNAMMAG 491
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 45/338 (13%)
Query: 99 VECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINF 158
++C+ MV ++ E + T+ +L+ V+ L G+QVH + L G + V +LIN
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 159 YAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMI 218
Y F AR VFD M R+++SW ++I
Sbjct: 360 YC-------------------------------KLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 219 AGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD-LKLGRWIHWYVQQRIV 277
AG AQ G +A+ LF ++ R ++ + L L + +H + +
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHA----I 444
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEAL 337
N S ++ ALI Y+ + +A +F + V+W +M+ + + G + L
Sbjct: 445 KINNVSDSF-VSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTL 502
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG 397
LF M G R D TL V C +++G+++ A ++ G +
Sbjct: 503 KLFALMHKQGE-----RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSS 556
Query: 398 CMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
++D+ + G + A +++P+ P+D W ++ GC
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 23/223 (10%)
Query: 144 GYCSNVFVETNLINFYAGRGGVEQARHV-FDGMGQRSVVSWNSILAGYVSCGDFDGARRV 202
G+ N ++L+ G AR + F+ +R ++ N++++ Y CG ARRV
Sbjct: 44 GFLRNAITSSDLM-----LGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRV 96
Query: 203 FDEMPIRNVVSWTTMIAGCAQKGRC-----KQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
FD+MP R++VSW +++A AQ C +QA LF +R+ V
Sbjct: 97 FDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCL 156
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G + H Y + + ++ + AL+++Y G + + +F +MP R
Sbjct: 157 HSGYVWASESFHGYACKIGLDGDE-----FVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
V W M+ A+ + G +EA+ L S G+ P+ ITL
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDL-----SSAFHSSGLNPNEITL 249
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
DL LG+ H RI+ ++ P L N LI MY+ CG + A +VF KMP R VS
Sbjct: 53 SDLMLGKCTH----ARILTF-EENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS 107
Query: 320 WTSMIMAFAKQGLG-----KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
W S++ A+A+ ++A LF+ + D V +TL +L C H+G+V
Sbjct: 108 WNSILAAYAQSSECVVENIQQAFLLFRILRQ-----DVVYTSRMTLSPMLKLCLHSGYV- 161
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
F G+ G +V++ + G + E L E MP + + LW +L
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLML 218
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 162/543 (29%), Positives = 267/543 (49%), Gaps = 60/543 (11%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNG-LSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
+ ++L +C++++ L ++H+ + NG L + + + + L+ Y Q+ ++F +
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE-PNGFTYSFLLSACVRGGLLREG 133
+ +WN +I GY+++ +++ + M + N T + ++ ACVR G
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
E +HG V+ +G + FV+ L++ Y+
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYS-------------------------------RL 453
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR-----------RARV 242
G D A R+F +M R++V+W TMI G + AL L +M+ R +
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
+ L G+ IH Y +N V + +AL+ MYA CG +
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYA-----IKNNLATDVAVGSALVDMYAKCGCL 568
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
+ +VF ++PQ++ ++W +IMA+ G G+EA+ L + M+ V GV+P+ +T I
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM-----VQGVKPNEVTFIS 623
Query: 363 VLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
V AC H+G VDEG RIF M +G+ P +HY C+VDLL RAG + EA+ L+ MP
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 423 PNDA-LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVI 481
N A W +LLG +IH N E+ + L+ +L+ + A+ Y VLL+NIY+ A W
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLI-QLEPNVASHY-VLLANIYSSAGLWDKAT 741
Query: 482 AVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
VR+ M E GV+K PG SWI+ VH FVAGD +H S + L + ++ + Y P
Sbjct: 742 EVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVP 801
Query: 542 DIT 544
D +
Sbjct: 802 DTS 804
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 188/448 (41%), Gaps = 54/448 (12%)
Query: 13 RSIQQHVFTLLQSCNNIQNL-----IQIHSQVVLNGLSQ---KTNIITKLLSFYIASDQL 64
+++ FTL+ NL + + QV GL + + II L++ Y +L
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKL 252
Query: 65 QHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC 124
+ L + WN ++ ++ +++E R+MV EP+ FT S +L AC
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 125 VRGGLLREGEQVHGIVLVKGYC-SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
+LR G+++H L G N FV + L++ Y V R VFDGM R + W
Sbjct: 313 SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF-GEMRRARV 242
N+++AGY +Q K+AL LF G A +
Sbjct: 373 NAMIAGY-------------------------------SQNEHDKEALLLFIGMEESAGL 401
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
G IH +V +R + R++ + N L+ MY+ G I
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR-----FVQNTLMDMYSRLGKI 456
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM------VSDGAGVDGVRPD 356
A ++F KM R V+W +MI + ++AL L M VS GA ++P+
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
+ITL+ +L +C + +G+ I A + ++ + +VD+ ++ G L + +
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELA 444
+ +P K N W ++ +H N + A
Sbjct: 576 DQIPQK-NVITWNVIIMAYGMHGNGQEA 602
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 172/439 (39%), Gaps = 51/439 (11%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLS-QKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
LL++ ++Q++ QIH+ V G + L++ Y +K+F I
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 77 PSTTVWNHIIRGYARSHTPWK-SVECYRQMVSTEAEPNGFTYSFLLSACVRGGL---LRE 132
+ WN +I S W+ ++E +R M+ EP+ FT +++AC + L
Sbjct: 162 RNQVSWNSLISSLC-SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G+QVH L KG N F+ L+ Y G + ++ + G R +V+WN++L+
Sbjct: 221 GKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL-- 277
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
Q + +AL EM VE
Sbjct: 278 -----------------------------CQNEQLLEALEYLREMVLEGVEPDEFTISSV 308
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
L+ G+ +H Y + + + +AL+ MY +C + +VF M
Sbjct: 309 LPACSHLEMLRTGKELHAYA----LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
R W +MI +++ KEAL LF M G+ ++ T+ V+ AC +G
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA----GLLANSTTMAGVVPACVRSGA 420
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
I + + G+ ++D+ SR G +D A + M + + W ++
Sbjct: 421 FSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
Query: 433 GGCQIHKNSELASVVEPKL 451
G ++ E A ++ K+
Sbjct: 479 TGYVFSEHHEDALLLLHKM 497
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 117/303 (38%), Gaps = 44/303 (14%)
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
W ++R RS+ ++V Y M+ +P+ + + LL A + G+Q+H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
GY G SV N+++ Y CGDF +
Sbjct: 125 KFGY------------------------------GVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG- 260
VFD + RN VSW ++I+ + + AL F M VE
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 261 --DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
L +G+ +H Y + + + + N L+ MY G + + + R V
Sbjct: 215 PEGLMMGKQVHAY------GLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W +++ + + EAL + MV ++GV PD T+ VL AC H + G+
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMV-----LEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 379 IFA 381
+ A
Sbjct: 324 LHA 326
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 150/500 (30%), Positives = 251/500 (50%), Gaps = 13/500 (2%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H V+ G + ++++Y D ++ A K+F + WN +I GY++S
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG 212
Query: 94 TPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+ + Y+ M++ ++ +PNG T + AC + L G +VH ++ ++ +
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
+I FYA G ++ AR +FD M ++ V++ +I++GY++ G A +F EM +
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
+W MI+G Q ++ ++ F EM R +LK G+ IH +
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
RN ++ + ++I YA G + A +VF RS ++WT++I A+A G
Sbjct: 393 -----IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGD 447
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
A LF M G +PD +TL VL A H+G D + IF SM + I P
Sbjct: 448 SDSACSLFDQM-----QCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPG 502
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
+EHY CMV +LSRAG L +A I MP+ P +WGALL G + + E+A +L
Sbjct: 503 VEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLF 562
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
E++ + Y +++N+Y A RW++ VR KM +G+KK PG SWI+ + F+A
Sbjct: 563 -EMEPENTGNY-TIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIA 620
Query: 513 GDMTHKHSYFIYEILSEIIK 532
D + + S +YEI+ +++
Sbjct: 621 KDSSCERSKEMYEIIEGLVE 640
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 193/457 (42%), Gaps = 88/457 (19%)
Query: 31 NLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYA 90
+++Q+H+++V+ + + +KL+SFY D+ + A +F I + +N ++ Y
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYT 99
Query: 91 RSHT---------PWKSVECYRQMVSTEAEPNGFTYSFLLSA---CVRGGLLREGEQVHG 138
W CY S A P+ + S +L A C L QVHG
Sbjct: 100 SREMYFDAFSLFLSWIGSSCYS---SDAARPDSISISCVLKALSGCDDFWLGSLARQVHG 156
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V+ G+ S+VFV +I +Y +E AR VFD M +R VVSWNS+++GY G F+
Sbjct: 157 FVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 199 ARRVFDEMPI-----RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
++++ M N V+ ++ C Q
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQS----------------------------- 247
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
DL G +H + + N Q + L NA+I YA CG + A +F +M
Sbjct: 248 ------SDLIFGLEVH-----KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDG-----AGVDGV--------------- 353
++ +V++ ++I + GL KEA+ LF M S G A + G+
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFRE 356
Query: 354 ------RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAG 407
RP+ +TL +L + ++ + G+ I A R G I ++D ++ G
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN-GADNNIYVTTSIIDNYAKLG 415
Query: 408 FLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
FL A + +N + A W A++ +H +S+ A
Sbjct: 416 FLLGAQRVFDNCKDRSLIA-WTAIITAYAVHGDSDSA 451
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 119/236 (50%), Gaps = 10/236 (4%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLIQI-----HSQVVLNGLSQKTNIIT-KLLSFYIASDQLQ 65
++ I+ H+ L CN + +++ + + +S+K ++ ++S Y+A ++
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A LFS +++ + WN +I G +++ + + +R+M+ + PN T S LL +
Sbjct: 318 EAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLT 377
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
L+ G+++H + G +N++V T++I+ YA G + A+ VFD RS+++W +
Sbjct: 378 YSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTA 437
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEM 237
I+ Y GD D A +FD+M V+ T +++ A G A +F M
Sbjct: 438 IITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSM 493
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 7/223 (3%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVW 82
L +N++ +IH+ + NG + T ++ Y L A ++F + S W
Sbjct: 376 LTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAW 435
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
II YA + + QM +P+ T + +LSA G + + +L
Sbjct: 436 TAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLT 495
Query: 143 KGYCSNVFVE--TNLINFYAGRGGVEQARHVFDGMGQRSVVS-WNSILAGYVSCGDFDGA 199
K Y VE +++ + G + A M + W ++L G GD + A
Sbjct: 496 K-YDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIA 554
Query: 200 RRVFD---EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
R D EM N ++T M Q GR ++A + +M+R
Sbjct: 555 RFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKR 597
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 270/539 (50%), Gaps = 45/539 (8%)
Query: 6 FVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
FVP I + + ++ + I+ L Q+H VV +GLS + L++FY S
Sbjct: 9 FVPCHNYNQICDLLLSSARTRSTIKGL-QLHGYVVKSGLSLIPLVANNLINFYSKSQLPF 67
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
+ + F S+T W+ II +A++ PW S+E ++M++ P+ +C
Sbjct: 68 DSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCA 127
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
G VH + + GY ++VFV ++L++ YA
Sbjct: 128 ILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYA------------------------- 162
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
CG+ AR++FDEMP RNVV+W+ M+ G AQ G ++AL LF E +
Sbjct: 163 ------KCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
L+LGR IH + ++ S + ++L+ +Y+ CGV A
Sbjct: 217 DYSFSSVISVCANSTLLELGRQIHG-----LSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
YQVF ++P ++ W +M+ A+A+ ++ + LFK M + G++P+ IT + VL
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM-----KLSGMKPNFITFLNVLN 326
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC HAG VDEGR F M + I P +HY +VD+L RAG L EA +I NMP+ P +
Sbjct: 327 ACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTE 385
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQ 485
++WGALL C +HKN+ELA+ K V EL ++G + LSN YA R++D R+
Sbjct: 386 SVWGALLTSCTVHKNTELAAFAADK-VFELGP-VSSGMHISLSNAYAADGRFEDAAKARK 443
Query: 486 KMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
+ + G KK G SW++ VH F AG+ H+ S IYE L+E+ ++ Y D +
Sbjct: 444 LLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTS 502
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 250/498 (50%), Gaps = 23/498 (4%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
LL Y+ ++Q + A +F + WN +I G+A + +++M+ +E +P+
Sbjct: 144 LLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPD 203
Query: 114 GFTYSFLLSAC-VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVF 172
+T+S L++AC + G VH ++L G+ S V + ++++FY G + A
Sbjct: 204 CYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMREL 263
Query: 173 DGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALS 232
+ + + VSWNSI+ + G+ + A VF P +N+V+WTTMI G + G +QAL
Sbjct: 264 ESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALR 323
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
F EM ++ V+ L G+ IH + Q + NAL
Sbjct: 324 FFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIH-----GCLIHCGFQGYAYVGNAL 378
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
+++YA CG I +A + F + + VSW +M+ AF GL +AL L+ M++ G
Sbjct: 379 VNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIA-----SG 433
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
++PD +T I +L C H+G V+EG IF SM + + I ++H CM+D+ R G L EA
Sbjct: 434 IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA 493
Query: 413 HGLIEN----MPLKPNDALWGALLGGCQIHKNSELASVVEPKL-VAELDTDGAAGYLVLL 467
L + N++ W LLG C H ++EL V L +AE + + VLL
Sbjct: 494 KDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMS---FVLL 550
Query: 468 SNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
SN+Y RW++ VR++M+E G+KK PG SWI++ V FV GD +H E L
Sbjct: 551 SNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPR----LEEL 606
Query: 528 SEIIKQSHVDSYEPDITG 545
SE + + P+ G
Sbjct: 607 SETLNCLQHEMRNPETFG 624
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 190/440 (43%), Gaps = 52/440 (11%)
Query: 51 ITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA 110
+T ++ S ++ A ++F + T WN ++ Y+R +++ + Q+ ++A
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 111 EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARH 170
+P+ ++++ +LS C G ++ G ++ +V+ G+C+++ V +LI+ Y A
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 171 VFDGM--GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK 228
VF M R+ V+W S+L Y++ F+ A VF EMP R +W MI+G A G+ +
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 229 QALSLFGEMRRARVE-XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVR 287
LSLF EM + + ++ GR +H ++ +N +V
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVH-----AVMLKNGWSSAVE 241
Query: 288 LNNALIHMYA----------------------------SCGVIGD---AYQVFTKMPQRS 316
N+++ Y +C IG+ A +VF P+++
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
V+WT+MI + + G G++AL F M+ GV D VL AC + G
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMK-----SGVDSDHFAYGAVLHACSGLALLGHG 356
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL---DEAHGLIENMPLKPNDALWGALLG 433
+ I + G +V+L ++ G + D A G I N L W +L
Sbjct: 357 KMIHGCLIHC-GFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVS----WNTMLF 411
Query: 434 GCQIHKNSELASVVEPKLVA 453
+H ++ A + ++A
Sbjct: 412 AFGVHGLADQALKLYDNMIA 431
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 46/290 (15%)
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
+V S +A G AR+VFD MP + V+W TM+ ++ G ++A++LF ++R
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
+ + G++K GR I Q +V R+ S+ +NN+LI MY C
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKI-----QSLVIRSGFCASLPVNNSLIDMYGKC 118
Query: 300 G-------VIGD--------------------------AYQVFTKMPQRSTVSWTSMIMA 326
V D A VF +MP+R +W MI
Sbjct: 119 SDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISG 178
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC-CHAGFVDEGRRIFASMNR 385
A G + L LFK M+ +PD T ++ AC + V GR + A M +
Sbjct: 179 HAHCGKLESCLSLFKEMLE-----SEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLK 233
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G S +E ++ ++ G D+A +E++ + + W +++ C
Sbjct: 234 N-GWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVS-WNSIIDAC 281
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 39/258 (15%)
Query: 21 TLLQSCN-NIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
+L+ +C+ + N++ +H+ ++ NG S +LSFY A + +I+
Sbjct: 209 SLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEV 268
Query: 77 PSTTVWNHI-------------------------------IRGYARSHTPWKSVECYRQM 105
+ WN I I GY R+ +++ + +M
Sbjct: 269 LTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM 328
Query: 106 VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGV 165
+ + + + F Y +L AC LL G+ +HG ++ G+ +V L+N YA G +
Sbjct: 329 MKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDI 388
Query: 166 EQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGC 221
++A F + + +VSWN++L + G D A +++D M + V++ ++ C
Sbjct: 389 KEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTC 448
Query: 222 AQKGRCKQALSLFGEMRR 239
+ G ++ +F M +
Sbjct: 449 SHSGLVEEGCMIFESMVK 466
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/510 (30%), Positives = 240/510 (47%), Gaps = 41/510 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH+ V G + Y + A KLF I + WN I
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P +++E + + + PN T+ L+AC L G Q+HG+VL G+ ++V V
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
LI+FY C + +F EM +N VS
Sbjct: 249 GLIDFYG-------------------------------KCKQIRSSEIIFTEMGTKNAVS 277
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W +++A Q ++A L+ R+ VE L+LGR IH +
Sbjct: 278 WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 337
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ V R ++ + +AL+ MY CG I D+ Q F +MP+++ V+ S+I +A QG
Sbjct: 338 KACVER-----TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQV 392
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
AL LF+ M G G P+ +T + +L AC AG V+ G +IF SM T+GI P
Sbjct: 393 DMALALFEEMAPRGCGPT---PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA 449
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
EHY C+VD+L RAG ++ A+ I+ MP++P ++WGAL C++H +L + L
Sbjct: 450 EHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLF- 508
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
+LD + + VLLSN +A A RW + VR+++ +G+KK G SWI + VH F A
Sbjct: 509 KLDPKDSGNH-VLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAK 567
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
D +H + I L+++ + Y+PD+
Sbjct: 568 DRSHILNKEIQTTLAKLRNEMEAAGYKPDL 597
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 138/330 (41%), Gaps = 51/330 (15%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
L +C++ +L +Q+H V+ +G ++ L+ FY Q++ + +F+ +
Sbjct: 214 AFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK 273
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ W ++ Y ++H K+ Y + E + F S +LSAC L G +H
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIH 333
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
+ +FV + L++ Y G +E + FD M ++++V+ NS++ GY G D
Sbjct: 334 AHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVD 393
Query: 198 GARRVFDEM------PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
A +F+EM P N +++ ++++ C++ G + + +F MR
Sbjct: 394 MALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR------------- 440
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
+ +P + ++ M G++ AY+ K
Sbjct: 441 --------------------------STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Query: 312 MPQRSTVS-WTSMIMAFAKQGLGKEALGLF 340
MP + T+S W ++ A GK LGL
Sbjct: 475 MPIQPTISVWGALQNACRMH--GKPQLGLL 502
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 158/402 (39%), Gaps = 46/402 (11%)
Query: 35 IHSQVVLNGLSQKTNIITK-LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS- 92
+H+++V S + L++ Y D + A + + W +I G A++
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
H VE + +M PN FT+ A L G+Q+H + + G +VFV
Sbjct: 88 HFSTALVEFF-EMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVG 146
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
+ + Y + AR +FD + +R++ +WN+ ++ V+ G A F E R +
Sbjct: 147 CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE--FRRID 204
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
I CA C L L LG +H
Sbjct: 205 GHPNSITFCAFLNACSDWLH-----------------------------LNLGMQLHG-- 233
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+V R+ V + N LI Y C I + +FT+M ++ VSW S++ A+ +
Sbjct: 234 ---LVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 290
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
++A L+ + D V + VL AC ++ GR I A + +
Sbjct: 291 DEKASVLYLR-----SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERT 344
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
I +VD+ + G ++++ + MP K N +L+GG
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGG 385
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 22/269 (8%)
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
N ++ Y + AR V P RNVVSWT++I+G AQ G AL F EMRR E
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR---E 102
Query: 244 XXXXXXXXXXXXXXXXGDLKL---GRWIHWYVQQ--RIVARNQQQPSVRLNNALIHMYAS 298
L+L G+ IH + RI+ V + + MY
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL-------DVFVGCSAFDMYCK 155
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
+ DA ++F ++P+R+ +W + I G +EA+ F +DG P++I
Sbjct: 156 TRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR----IDG-HPNSI 210
Query: 359 TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
T L AC ++ G ++ + R+ G + ++D + + + +
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRS-GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTE 269
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVV 447
M K N W +L+ + E ASV+
Sbjct: 270 MGTK-NAVSWCSLVAAYVQNHEDEKASVL 297
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 254/529 (48%), Gaps = 52/529 (9%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++++ C N++ L Q+H VV G NI T L+ Y + A +LF I
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 78 STTV-WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
V W +I G+ ++ ++V+ + +M PN FTYS +L+A + +V
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEV 415
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H V+ Y +RS ++L YV G
Sbjct: 416 HAQVVKTNY-------------------------------ERSSTVGTALLDAYVKLGKV 444
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX- 255
+ A +VF + +++V+W+ M+AG AQ G + A+ +FGE+ + ++
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
+ G+ H + +++ S+ +++AL+ MYA G I A +VF + ++
Sbjct: 505 AATNASMGQGKQFHGFA-----IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
VSW SMI +A+ G +AL +FK M +DGV T I V AC HAG V+E
Sbjct: 560 DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV-----TFIGVFAACTHAGLVEE 614
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G + F M R I+P EH CMVDL SRAG L++A +IENMP +W +L C
Sbjct: 615 GEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
++HK +EL + K++A D AA VLLSN+YA + WQ+ VR+ M E VKK
Sbjct: 675 RVHKKTELGRLAAEKIIAMKPEDSAA--YVLLSNMYAESGDWQERAKVRKLMNERNVKKE 732
Query: 496 PGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
PG SWI++ + F+AGD +H IY L ++ + YEPD +
Sbjct: 733 PGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTS 781
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 141/334 (42%), Gaps = 42/334 (12%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H Q + G ++ T L+ Y+ + K+F + + W +I GYAR+
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ + + +M + +PN FT++ L G+ G QVH +V+ G + V
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+LIN Y + CG+ AR +FD+ +++VV+
Sbjct: 234 SLINLY-------------------------------LKCGNVRKARILFDKTEVKSVVT 262
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W +MI+G A G +AL +F MR V +L+ +H V
Sbjct: 263 WNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV 322
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QRSTVSWTSMIMAFAKQGL 332
+ +Q + AL+ Y+ C + DA ++F ++ + VSWT+MI F +
Sbjct: 323 KYGFLFDQN-----IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
+EA+ LF M GVRP+ T V+L A
Sbjct: 378 KEEAVDLFSEMKR-----KGVRPNEFTYSVILTA 406
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 175/413 (42%), Gaps = 59/413 (14%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+Q+H+ VV NGL + + L++ Y+ ++ A LF + S WN +I GYA +
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+++ + M + +++ ++ C LR EQ+H V+ G+ + +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 153 TNLINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
T L+ Y+ + A +F +G +VVSW ++++G++
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL-------------------- 373
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
Q ++A+ LF EM+R V +
Sbjct: 374 -----------QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE-------- 414
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
V ++V N ++ S + AL+ Y G + +A +VF+ + + V+W++M+ +A+ G
Sbjct: 415 VHAQVVKTNYERSST-VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITL--IVVLCACCHAGFVDEGRRIFASMNRTWGI 389
+ A+ +F + G++P+ T I+ +CA +A + +G++ + I
Sbjct: 474 ETEAAIKMFGELTK-----GGIKPNEFTFSSILNVCAATNAS-MGQGKQFHG-----FAI 522
Query: 390 SPRIEHYGC----MVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
R++ C ++ + ++ G ++ A + + K + W +++ G H
Sbjct: 523 KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQH 574
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 40/287 (13%)
Query: 59 IASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM--VSTEAEPNGFT 116
++S +L +AH LF + ++ G++R ++ + + + E + + F+
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+SA + L G Q+H + G+ +V V T+L++ Y + R VFD M
Sbjct: 98 SVLKVSATLCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
+R+VV+W ++++GY A+ + L+LF
Sbjct: 156 ERNVVTWTTLISGY-------------------------------ARNSMNDEVLTLFMR 184
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M+ + G G +H +V +N ++ ++N+LI++Y
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH-----TVVVKNGLDKTIPVSNSLINLY 239
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
CG + A +F K +S V+W SMI +A GL EALG+F +M
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/501 (31%), Positives = 250/501 (49%), Gaps = 34/501 (6%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQ---KTNIITKLLSFYIAS---------DQLQHAHK 69
LL+ C +++L Q H+Q + +G K N + + F I S + + +A
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTP--WKSVECYRQMVSTEAEPNGFTYSFLLSACV-- 125
+F I NPST +N IIR H P S + +M P+ T+ F+ AC
Sbjct: 70 VFRFITNPSTFCFNTIIR-ICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAK 128
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
+ G L + +H L G S++F LI Y+ ++ A +FD QR VV++N
Sbjct: 129 KNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNV 188
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
++ G V + AR +FD MP+R++VSW ++I+G AQ C++A+ LF EM ++
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
GD + G+ IH Y +++ + + L L+ YA CG I A
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDS-----FLATGLVDFYAKCGFIDTA 303
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
++F ++ +W +MI A G G+ + F+ MVS G++PD +T I VL
Sbjct: 304 MEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVS-----SGIKPDGVTFISVLV 358
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL---- 421
C H+G VDE R +F M + ++ ++HYGCM DLL RAG ++EA +IE MP
Sbjct: 359 GCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGN 418
Query: 422 KPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVI 481
+ W LLGGC+IH N E+A ++ A DG G ++ +YA A+RW++V+
Sbjct: 419 REKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDG--GVYKVMVEMYANAERWEEVV 476
Query: 482 AVRQKMI-EMGVKKPPGQSWI 501
VR+ + + VKK G S +
Sbjct: 477 KVREIIDRDKKVKKNVGFSKV 497
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 217/424 (51%), Gaps = 41/424 (9%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
P +WN+I+R Y R +P +++ Y MV + P+ ++ ++ A V+ G+++
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H + + G+ + F E+ I Y G+F
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYC-------------------------------KAGEF 168
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
+ AR+VFDE P R + SW +I G GR +A+ +F +M+R+ +E
Sbjct: 169 ENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC 228
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
GDL L +H V Q A+ +++ + + N+LI MY CG + A +F +M QR+
Sbjct: 229 GGLGDLSLAFQLHKCVLQ---AKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN 285
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
VSW+SMI+ +A G EAL F+ M G VRP+ IT + VL AC H G V+EG
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMREFG-----VRPNKITFVGVLSACVHGGLVEEG 340
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
+ FA M + + P + HYGC+VDLLSR G L EA ++E MP+KPN +WG L+GGC+
Sbjct: 341 KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCE 400
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
+ E+A V P +V EL+ G V+L+N+YA W+DV VR+ M V K P
Sbjct: 401 KFGDVEMAEWVAPYMV-ELEP-WNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIP 458
Query: 497 GQSW 500
S+
Sbjct: 459 AYSY 462
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 122/247 (49%), Gaps = 20/247 (8%)
Query: 1 MLIERF-VPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI 59
+L +R+ +P + ++Q H FTL + ++HS V G + ++ Y
Sbjct: 113 VLPDRYSLPIVIKAAVQIHDFTLGK---------ELHSVAVRLGFVGDEFCESGFITLYC 163
Query: 60 ASDQLQHAHKLFSTIDNPSTTV--WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
+ + ++A K+F +NP + WN II G + ++VE + M + EP+ FT
Sbjct: 164 KAGEFENARKVFD--ENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTM 221
Query: 118 SFLLSACVRGGLLREGEQVHGIVLVKGY--CSNVFVETNLINFYAGRGGVEQARHVFDGM 175
+ ++C G L Q+H VL S++ + +LI+ Y G ++ A H+F+ M
Sbjct: 222 VSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM 281
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMP---IR-NVVSWTTMIAGCAQKGRCKQAL 231
QR+VVSW+S++ GY + G+ A F +M +R N +++ +++ C G ++
Sbjct: 282 RQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK 341
Query: 232 SLFGEMR 238
+ F M+
Sbjct: 342 TYFAMMK 348
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 40/237 (16%)
Query: 3 IERFVPASGRRSIQQHVFTLLQ---SCNNIQNL---IQIHSQVVLNGLSQKTNI--ITKL 54
+E FV R ++ FT++ SC + +L Q+H V+ +K++I + L
Sbjct: 203 VEMFVDMK-RSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 55 LSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNG 114
+ Y ++ A +F + + W+ +I GYA + +++EC+RQM PN
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Query: 115 FTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
T+ +LSACV GGL+ EG K Y + + E L G+ + D
Sbjct: 322 ITFVGVLSACVHGGLVEEG---------KTYFAMMKSEFEL------EPGLSHYGCIVDL 366
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-NVVSWTTMIAGCAQKGRCKQA 230
+ + G A++V +EMP++ NV+ W ++ GC + G + A
Sbjct: 367 LSRD---------------GQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/528 (28%), Positives = 257/528 (48%), Gaps = 51/528 (9%)
Query: 11 GRRSIQQHVFTL---LQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQL 64
GR+ I + FT L++C N ++ +QIH + G + L+ Y ++
Sbjct: 99 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 65 QHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM--VSTEAEPNGFTYSFLLS 122
A K+F I + S WN +I G+ + K+++ + M + + P+ FT + LL
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 123 ACVRGGLLREGEQVHGIVLVKGY-CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
AC G++ G+Q+HG ++ G+ C + S
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPS------------------------------SAT 248
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
S++ YV CG AR+ FD++ + ++SW+++I G AQ+G +A+ LF ++
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
+ L+ G+ + Q + + + N+++ MY CG+
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQM-----QALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
+ +A + F +M + +SWT +I + K GLGK+++ +F M+ + PD + +
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN-----IEPDEVCYL 418
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
VL AC H+G + EG +F+ + T GI PR+EHY C+VDLL RAG L EA LI+ MP+
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 422 KPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVI 481
KPN +W LL C++H + EL V K++ +D A Y V++SN+Y A W +
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEV-GKILLRIDAKNPANY-VMMSNLYGQAGYWNEQG 536
Query: 482 AVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSE 529
R+ G+KK G SW++I VH F +G+ +H + I E L E
Sbjct: 537 NARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKE 584
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 166/397 (41%), Gaps = 54/397 (13%)
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
+L C R GL +G QVH +L G N+ LI+ Y
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYC------------------- 52
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
C + A +VFD MP RNVVSW+ +++G G K +LSLF EM R
Sbjct: 53 ------------KCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR 100
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
+ L+ G IH + + + V + N+L+ MY+ C
Sbjct: 101 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFC-----LKIGFEMMVEVGNSLVDMYSKC 155
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G I +A +VF ++ RS +SW +MI F G G +AL F M A + RPD T
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE--ANIKE-RPDEFT 212
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHY-GCMVDLLSRAGFLDEAHGLIEN 418
L +L AC G + G++I + R+ P G +VDL + G+L A +
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 272
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVVE--PKLVAELDTDGAAGYLVLLSNIYAFAKR 476
+ K + +LG Q + E + + +L +++D+ L S I FA
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDS------FALSSIIGVFA-- 324
Query: 477 WQDVIAVRQ--KMIEMGVKKPPGQSWIQINGVVHDFV 511
D +RQ +M + VK P G +N VV ++
Sbjct: 325 --DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYL 359
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 180/419 (42%), Gaps = 68/419 (16%)
Query: 27 NNIQNLIQIHSQVVLNGLSQK--------------TNIITK--LLSFYIASDQLQHAHKL 70
N QNL+ I GLS + N+IT L+ Y + A+K+
Sbjct: 4 NQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKV 63
Query: 71 FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLL 130
F ++ + W+ ++ G+ + S+ + +M PN FT+S L AC L
Sbjct: 64 FDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNAL 123
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
+G Q+HG L G+ V V +L++ Y+ G + +A VF + RS++SWN+++AG+
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 191 VSCGDFDGARRVFDEMPIRNV------VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEX 244
V G A F M N+ + T+++ C+ G
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM------------------ 225
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
+ G+ IH ++ + + S + +L+ +Y CG +
Sbjct: 226 -----------------IYAGKQIHGFL---VRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A + F ++ +++ +SW+S+I+ +A++G EA+GLFK + + + D+ L ++
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI-----DSFALSSII 320
Query: 365 CACCHAGFVDEGRRIFA-SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
+ +G+++ A ++ G+ + +VD+ + G +DEA M LK
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQLK 377
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 247/502 (49%), Gaps = 56/502 (11%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH + V G + + L+ Y D L+ A ++F + S WN +I+GY
Sbjct: 229 EIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKG 288
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
VE +M+ P+ T + +L AC R L G+ +HG V+ ++++V
Sbjct: 289 DSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNC 348
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM------P 207
+LI+ Y G A VF + SWN +++ Y+S G++ A V+D+M P
Sbjct: 349 SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKP 408
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
+VV++T+++ C+Q L+ G+
Sbjct: 409 --DVVTFTSVLPACSQ-----------------------------------LAALEKGKQ 431
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
IH + + + ++ L +AL+ MY+ CG +A+++F +P++ VSWT MI A+
Sbjct: 432 IHLSISESRLETDEL-----LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
G +EAL F M G ++PD +TL+ VL AC HAG +DEG + F+ M +
Sbjct: 487 GSHGQPREALYQFDEMQKFG-----LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKY 541
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA-LWGALLGGCQIHKNSELASV 446
GI P IEHY CM+D+L RAG L EA+ +I+ P ++A L L C +H L
Sbjct: 542 GIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDR 601
Query: 447 VEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGV 506
+ +L+ E D A+ Y+VL N+YA + W VR KM EMG++K PG SWI+++
Sbjct: 602 I-ARLLVENYPDDASTYMVLF-NLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDK 659
Query: 507 VHDFVAGDMTHKHSYFIYEILS 528
V F A D +H + +YE L+
Sbjct: 660 VCHFFAEDRSHLRAENVYECLA 681
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 184/396 (46%), Gaps = 58/396 (14%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH+ VV +G + + L+ Y + +++ ++F + WN +I + +S
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
K++E + +M S+ EPN + + +SAC R L G+++H + KG+ + +V +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV--- 211
L++ Y +E AR VF M ++S+V+WNS++ GYV+ GD + + M I
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 212 -VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
+ T+++ C+ R+R +L G++IH
Sbjct: 309 QTTLTSILMACS----------------RSR-------------------NLLHGKFIHG 333
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
YV + +V + +N +LI +Y CG A VF+K + SW MI ++
Sbjct: 334 YVIRSVV-----NADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISV 388
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G +A+ ++ MVS GV+PD +T VL AC +++G++I S++ +
Sbjct: 389 GNWFKAVEVYDQMVS-----VGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES---- 439
Query: 391 PRIEH----YGCMVDLLSRAGFLDEAHGLIENMPLK 422
R+E ++D+ S+ G EA + ++P K
Sbjct: 440 -RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 172/380 (45%), Gaps = 59/380 (15%)
Query: 19 VFTLLQSCNN----IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
+ +LL+ C N ++ + +H +++ GL + + L++ Y A +F
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 75 DNPSTT-VWNHIIRGYARSHTPWKSVECYRQMVSTE-AEPNGFTYSFLLSACVRGGLLRE 132
D S +WN ++ GY+++ ++E ++++++ P+ FT+ ++ A G L RE
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA--YGALGRE 123
Query: 133 --GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
G +H +V+ GY +V V ++L+ YA E + VFD M +R V SWN++++ +
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 191 VSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
G+ + A +F M N VS T I+ C++ L
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSR---------LLW----------- 223
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
L+ G+ IH R + + +N+AL+ MY C + A
Sbjct: 224 ---------------LERGKEIH-----RKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
+VF KMP++S V+W SMI + +G K + + M+ ++G RP TL +L A
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI-----IEGTRPSQTTLTSILMA 318
Query: 367 CCHAGFVDEGRRIFASMNRT 386
C + + G+ I + R+
Sbjct: 319 CSRSRNLLHGKFIHGYVIRS 338
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-NVVSWTTMIAGCAQKGRCKQALSLFG 235
+R VV S++ Y +C D AR VF+ IR +V W ++++G ++ L +F
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 236 EMRRARVEXXXXXXXXXXXXXX-XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
+ + G LGR IH +V ++ V + ++L+
Sbjct: 96 RLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIH-----TLVVKSGYVCDVVVASSLVG 150
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MYA + ++ QVF +MP+R SW ++I F + G ++AL LF M S G
Sbjct: 151 MYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMES-----SGFE 205
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIF-ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
P++++L V + AC +++ G+ I + + + + + +VD+ + L+ A
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN--SALVDMYGKCDCLEVAR 263
Query: 414 GLIENMPLKPNDALWGALLGG 434
+ + MP K A W +++ G
Sbjct: 264 EVFQKMPRKSLVA-WNSMIKG 283
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 267/544 (49%), Gaps = 47/544 (8%)
Query: 4 ERFVPASGRRSIQQ-HVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYI 59
E ++G R++ V +LL +C + + IHS + +GL + + KL+ Y
Sbjct: 234 EALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 60 ASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSF 119
+L+ K+F + WN II+ Y + P +++ +++M + +P+ T
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
L S + G +R V G L KG+ F+E I
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGW----FLEDITIG---------------------- 387
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
N+++ Y G D AR VF+ +P +V+SW T+I+G AQ G +A+ ++ M
Sbjct: 388 ----NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 240 -ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
+ G L+ G +H R++ +N V + +L MY
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLH----GRLL-KNGLYLDVFVVTSLADMYGK 498
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
CG + DA +F ++P+ ++V W ++I G G++A+ LFK M+ +G V+PD I
Sbjct: 499 CGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG-----VKPDHI 553
Query: 359 TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
T + +L AC H+G VDEG+ F M +GI+P ++HYGCMVD+ RAG L+ A I++
Sbjct: 554 TFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKS 613
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQ 478
M L+P+ ++WGALL C++H N +L + L E++ + GY VLLSN+YA A +W+
Sbjct: 614 MSLQPDASIWGALLSACRVHGNVDLGKIASEHLF-EVEPE-HVGYHVLLSNMYASAGKWE 671
Query: 479 DVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDS 538
V +R G++K PG S ++++ V F G+ TH +Y L+ + + +
Sbjct: 672 GVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 731
Query: 539 YEPD 542
Y PD
Sbjct: 732 YVPD 735
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 195/463 (42%), Gaps = 45/463 (9%)
Query: 6 FVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
F+ +SG + ++L++C + + +IH + G + L+ Y +
Sbjct: 143 FMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
+A LF + WN +I GY +S +++ + + ++ T LLSAC
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS----VTVVSLLSACT 258
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
G G +H + G S +FV LI+ YA G + + VFD M R ++SWNS
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
I+ Y +E P+R A+SLF EMR +R++
Sbjct: 319 IIKAY-----------ELNEQPLR--------------------AISLFQEMRLSRIQPD 347
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
GD++ R VQ + + + + NA++ MYA G++ A
Sbjct: 348 CLTLISLASILSQLGDIRACR----SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
VF +P +SW ++I +A+ G EA+ ++ M +G + + T + VL
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE----IAANQGTWVSVLP 459
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC AG + +G ++ + + G+ + + D+ + G L++A L +P + N
Sbjct: 460 ACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNS 517
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
W L+ H + E A ++ +++ E ++ LLS
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 180/417 (43%), Gaps = 50/417 (11%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
V TL + C N+Q+ +H+++V++ Q I KL++ Y + A F I N
Sbjct: 57 VHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQ-MVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I GY R+ + + C+ M+S+ P+ T+ +L AC + +G ++H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIH 173
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
+ L G+ +V+V +LI+ Y+ V AR +FD M R + SWN++++GY G+
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A + + + + V+ ++++ C +
Sbjct: 234 EALTLSNGLRAMDSVTVVSLLSACTE---------------------------------- 259
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
GD G IH Y ++ + + ++N LI +YA G + D +VF +M R
Sbjct: 260 -AGDFNRGVTIHSY-----SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDL 313
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+SW S+I A+ A+ LF+ M + ++PD +TLI + G + R
Sbjct: 314 ISWNSIIKAYELNEQPLRAISLFQEM-----RLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ R I +V + ++ G +D A + +P + W ++ G
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISG 424
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 200/384 (52%), Gaps = 12/384 (3%)
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP 207
++ + +I+ Y G + +AR +FD M R V+SWN++L GY + GD + RVFD+MP
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXXXXXGDLKLGR 266
RNV SW +I G AQ GR + L F M V G G+
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 267 WIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
W+H Y + + V + NALI MY CG I A +VF + +R +SW +MI
Sbjct: 209 WVHKYGE----TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 264
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
A G G EAL LF M + G + PD +T + VLCAC H G V++G F SM
Sbjct: 265 LAAHGHGTEALNLFHEMKNSG-----ISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTD 319
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASV 446
+ I P IEH GC+VDLLSRAGFL +A I MP+K + +W LLG +++K ++ V
Sbjct: 320 FSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEV 379
Query: 447 VEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGV 506
+L+ +L+ A + V+LSNIY A R+ D ++ M + G KK G SWI+ +
Sbjct: 380 ALEELI-KLEPRNPANF-VMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDG 437
Query: 507 VHDFVAGDMTHKHSYFIYEILSEI 530
+ F + H + + IL E+
Sbjct: 438 LVKFYSSGEKHPRTEELQRILREL 461
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 120/278 (43%), Gaps = 53/278 (19%)
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCA 222
G + A VF M +++VV W S++ GY+ D ARR FD P R++V W TMI+G
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
+ G +A SLF +M V + W
Sbjct: 102 EMGNMLEARSLFDQMPCRDV-------------------------MSW------------ 124
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
N ++ YA+ G + +VF MP+R+ SW +I +A+ G E LG FK
Sbjct: 125 -------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKR 177
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP-RIEHYGCMVD 401
MV +G+ V P+ T+ +VL AC G D G+ + T G + + ++D
Sbjct: 178 MVDEGS----VVPNDATMTLVLSACAKLGAFDFGKWVH-KYGETLGYNKVDVNVKNALID 232
Query: 402 LLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGCQIH 438
+ + G ++ A + + +K D + W ++ G H
Sbjct: 233 MYGKCGAIEIAMEVFKG--IKRRDLISWNTMINGLAAH 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 44 LSQKTNII--TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYAR---------- 91
LS + +I+ ++S YI + A LF + WN ++ GYA
Sbjct: 84 LSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERV 143
Query: 92 -SHTPWKSVECYRQMVSTEAE---------------------PNGFTYSFLLSACVRGGL 129
P ++V + ++ A+ PN T + +LSAC + G
Sbjct: 144 FDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGA 203
Query: 130 LREGEQVHGIVLVKGYCS-NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
G+ VH GY +V V+ LI+ Y G +E A VF G+ +R ++SWN+++
Sbjct: 204 FDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 263
Query: 189 GYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEM 237
G + G A +F EM + V++ ++ C G + L+ F M
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 247/487 (50%), Gaps = 44/487 (9%)
Query: 29 IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRG 88
+ +L ++H + + ++ Y L +A ++F I + + WN +I G
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 89 YARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN 148
+A+S+ P S++ + QM + P+ FT LLSAC + LR G++VHG ++
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII------- 523
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
R +E R + + S+L+ Y+ CG+ + +FD M
Sbjct: 524 -------------RNWLE-----------RDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
+++VSW T+I G Q G +AL +F +M ++ L+LGR
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
H Y + ++ + + +LI MYA G I + +VF + ++ST SW +MIM +
Sbjct: 620 HAYALKHLL-----EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWG 388
GL KEA+ LF+ M G PD +T + VL AC H+G + EG R M ++G
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHN-----PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG 729
Query: 389 ISPRIEHYGCMVDLLSRAGFLDEAHGLI-ENMPLKPNDALWGALLGGCQIHKNSELASVV 447
+ P ++HY C++D+L RAG LD+A ++ E M + + +W +LL C+IH+N E+ V
Sbjct: 730 LKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKV 789
Query: 448 EPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVV 507
KL EL+ + Y VLLSN+YA +W+DV VRQ+M EM ++K G SWI++N V
Sbjct: 790 AAKLF-ELEPEKPENY-VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKV 847
Query: 508 HDFVAGD 514
FV G+
Sbjct: 848 FSFVVGE 854
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 172/392 (43%), Gaps = 50/392 (12%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVST- 108
+ T++++ Y + +F + + + WN +I Y+R+ + +E + +M+ST
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 109 EAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQA 168
+ P+ FTY ++ AC + G VHG+V+ G +VFV L++FY G V A
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 169 RHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK 228
++FD MP RN+VSW +MI + G +
Sbjct: 242 L-------------------------------QLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 229 QALSLFGEMRRARVEXXXXXXXXXXXXX----XXXGDLKLGRWIH-WYVQQRIVARNQQQ 283
++ L GEM + ++ LG+ +H W V+ R+
Sbjct: 271 ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL------D 324
Query: 284 PSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
+ LNNAL+ MY+ CG I +A +F ++ VSW +M+ F+ +G + G F +
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVL 381
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA-SMNRTWGISPRIEHYGCMVDL 402
AG + V+ D +T++ + C H F+ + + S+ + + + + + V
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN--AFVAS 439
Query: 403 LSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++ G L A + + K ++ W AL+GG
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNS-WNALIGG 470
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 113/229 (49%), Gaps = 7/229 (3%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V +LL +C+ +++L ++H ++ N L + + +LS YI +L LF ++
Sbjct: 499 VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAME 558
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ S WN +I GY ++ P +++ +RQMV + G + + AC LR G +
Sbjct: 559 DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
H L + F+ +LI+ YA G + Q+ VF+G+ ++S SWN+++ GY G
Sbjct: 619 AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 678
Query: 196 FDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
A ++F+EM + +++ ++ C G + L +M+ +
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 160/396 (40%), Gaps = 49/396 (12%)
Query: 2 LIERFVPASGRRSIQQHVFT---LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLL 55
++E F+ + FT ++++C + ++ + +H VV GL + + L+
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV 229
Query: 56 SFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE---- 111
SFY + A +LF + + WN +IR ++ + +S +M+ +
Sbjct: 230 SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
P+ T +L C R + G+ VHG + + + L++ Y+ G + A+ +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
F ++VVSWN+++ G+ + GD G V + M+AG
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ-----------MLAG----------- 387
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
GE +A E LK +H Y ++ N+ + NA
Sbjct: 388 ---GEDVKAD-EVTILNAVPVCFHESFLPSLK---ELHCYSLKQEFVYNEL-----VANA 435
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
+ YA CG + A +VF + ++ SW ++I A+ + +L M +
Sbjct: 436 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-----KIS 490
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
G+ PD+ T+ +L AC + G+ + + R W
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 258/527 (48%), Gaps = 46/527 (8%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L++C ++++L I++ ++ G ++ + L+ Y + A +F++++
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
T WN II GY +S ++++ ++ M+ E + + TY L+S R L+ G+
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H + G C ++ V LI+ YA CG+
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYA-------------------------------KCGE 458
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
+ ++F M + V+W T+I+ C + G L + +MR++ V
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
+LG+ IH + R + +++ NALI MY+ CG + ++ +VF +M +R
Sbjct: 519 CASLAAKRLGKEIHC-----CLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR 573
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
V+WT MI A+ G G++AL F M G + PD++ I ++ AC H+G VDE
Sbjct: 574 DVVTWTGMIYAYGMYGEGEKALETFADMEKSG-----IVPDSVVFIAIIYACSHSGLVDE 628
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G F M + I P IEHY C+VDLLSR+ + +A I+ MP+KP+ ++W ++L C
Sbjct: 629 GLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRAC 688
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
+ + E A V +++ EL+ D GY +L SN YA ++W V +R+ + + + K
Sbjct: 689 RTSGDMETAERVSRRII-ELNPDD-PGYSILASNAYAALRKWDKVSLIRKSLKDKHITKN 746
Query: 496 PGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
PG SWI++ VH F +GD + S IY+ L + + Y PD
Sbjct: 747 PGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPD 793
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 191/414 (46%), Gaps = 47/414 (11%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV- 81
L S +N+ L +IH+ V+ GL KL+ Y + + +F + +P+ V
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV-SPAKNVY 72
Query: 82 -WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
WN IIR ++++ +++E Y ++ ++ P+ +T+ ++ AC G+ V+ +
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
L G+ S++FV L++ Y+ G + +AR VFD M R +VSWNS+++GY S G ++ A
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 201 RVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
++ E+ +V + ++ L FG +
Sbjct: 193 EIYHELKNSWIVPDSFTVSS---------VLPAFGNLLV--------------------- 222
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
+K G+ +H + ++ V +NN L+ MY DA +VF +M R +VS+
Sbjct: 223 -VKQGQGLHGF-----ALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY 276
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
+MI + K + +E++ +F +D +PD +T+ VL AC H + + I+
Sbjct: 277 NTMICGYLKLEMVEESVRMFL------ENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIY 330
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
M + G ++D+ ++ G + A + +M K + W +++ G
Sbjct: 331 NYMLKA-GFVLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISG 382
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 178/404 (44%), Gaps = 50/404 (12%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
++ Q++ G + L+ Y L A ++F + WN +I GY+
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+++E Y ++ ++ P+ FT S +L A ++++G+ +HG L G S V V
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR---NV 211
L+ Y AR VFD M R VS+N+++ GY+ + + R+F E + ++
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL 307
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
++ ++++ C G +R DL L ++I+ Y
Sbjct: 308 LTVSSVLRAC-------------GHLR----------------------DLSLAKYIYNY 332
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
+ + A + +VR N LI +YA CG + A VF M + TVSW S+I + + G
Sbjct: 333 MLK---AGFVLESTVR--NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSG 387
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
EA+ LFK M+ + + D IT ++++ + G+ + ++ ++ GI
Sbjct: 388 DLMEAMKLFKMMM-----IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GICI 441
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
+ ++D+ ++ G + ++ + +M + W ++ C
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISAC 484
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/518 (29%), Positives = 258/518 (49%), Gaps = 52/518 (10%)
Query: 29 IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI-DNPSTTVWNHIIR 87
+ ++ ++H G + + L++ Y ++ A K+F + D + +WN ++
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 88 GYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCS 147
GY++ ++ + +M + T + +LSA G + G +HG+ + G S
Sbjct: 236 GYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGS 295
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM- 206
++ V LI+ Y +E+A +F+ M +R + +WNS+L + CGD DG +F+ M
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 207 --PIR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLK 263
IR ++V+ TT++ C + +Q
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQ---------------------------------- 381
Query: 264 LGRWIHWYVQQRIVA--RNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWT 321
GR IH Y+ IV+ N++ + ++N+L+ MY CG + DA VF M + + SW
Sbjct: 382 -GREIHGYM---IVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 437
Query: 322 SMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
MI + Q G+ AL +F M G V+PD IT + +L AC H+GF++EGR A
Sbjct: 438 IMINGYGVQSCGELALDMFSCMCRAG-----VKPDEITFVGLLQACSHSGFLNEGRNFLA 492
Query: 382 SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNS 441
M + I P +HY C++D+L RA L+EA+ L + P+ N +W ++L C++H N
Sbjct: 493 QMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNK 552
Query: 442 ELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWI 501
+LA +V K + EL+ + GY VL+SN+Y A ++++V+ VR M + VKK PG SWI
Sbjct: 553 DLA-LVAGKRLHELEPEHCGGY-VLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWI 610
Query: 502 QINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
+ VH F G+ TH I++ LS +I H Y
Sbjct: 611 VLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEY 648
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 183/430 (42%), Gaps = 52/430 (12%)
Query: 23 LQSCNNIQNLI---QIHSQVVLNG-LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LQ C ++ + QIH +V G L T L++ Y ++ A +F +
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSER-D 125
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
+N +I G+ + +P ++E YR+M + P+ +T+ LL L + ++VHG
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGS-DAMELSDVKKVHG 184
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+ G+ S+ +V + L+ Y+ VE A+
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQ----------------------------- 215
Query: 199 ARRVFDEMPIRN-VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
+VFDE+P R+ V W ++ G +Q R + AL +F +MR V
Sbjct: 216 --KVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFT 273
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
GD+ GR IH + + + ++NALI MY + +A +F M +R
Sbjct: 274 VSGDIDNGRSIHG-----LAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDL 328
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+W S++ G L LF+ M+ G+RPD +TL VL C + +GR
Sbjct: 329 FTWNSVLCVHDYCGDHDGTLALFERML-----CSGIRPDIVTLTTVLPTCGRLASLRQGR 383
Query: 378 RIFASMNRTWGISPRIEH---YGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
I M + ++ + + + ++D+ + G L +A + ++M +K + A W ++ G
Sbjct: 384 EIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK-DSASWNIMING 442
Query: 435 CQIHKNSELA 444
+ ELA
Sbjct: 443 YGVQSCGELA 452
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 16/232 (6%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
V + +I N IH V G + L+ Y S L+ A+ +F +D
Sbjct: 268 VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERD 327
Query: 79 TTVWNHI--IRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
WN + + Y H ++ + +M+ + P+ T + +L C R LR+G ++
Sbjct: 328 LFTWNSVLCVHDYCGDHD--GTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREI 385
Query: 137 HGIVLVKGY----CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY-- 190
HG ++V G SN F+ +L++ Y G + AR VFD M + SWN ++ GY
Sbjct: 386 HGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGV 445
Query: 191 VSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMR 238
SCG+ A +F M V +++ ++ C+ G + + +M
Sbjct: 446 QSCGEL--ALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQME 495
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 2 LIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGL----SQKTNIITKL 54
L ER + SG R + T+L +C + +L Q IH ++++GL S I L
Sbjct: 350 LFERML-CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSL 408
Query: 55 LSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNG 114
+ Y+ L+ A +F ++ + WN +I GY +++ + M +P+
Sbjct: 409 MDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDE 468
Query: 115 FTYSFLLSACVRGGLLREGEQ 135
T+ LL AC G L EG
Sbjct: 469 ITFVGLLQACSHSGFLNEGRN 489
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 255/526 (48%), Gaps = 50/526 (9%)
Query: 19 VFTLLQSCN---NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V TL+QS + +++ L +H+ + G+ + + +S Y L A +F ID
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 76 NPSTTV--WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
TV WN + + Y+ + + Y M+ E +P+ T+ L ++C L +G
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
+H +A G +Q + + N+ ++ Y
Sbjct: 276 RLIHS--------------------HAIHLGTDQ-----------DIEAINTFISMYSKS 304
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
D AR +FD M R VSWT MI+G A+KG +AL+LF M ++ +
Sbjct: 305 EDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI 364
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
G L+ G+WI R ++ +V + NALI MY+ CG I +A +F P
Sbjct: 365 SGCGKFGSLETGKWI----DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+++ V+WT+MI +A G+ EAL LF M+ +D +P+ IT + VL AC H+G +
Sbjct: 421 EKTVVTWTTMIAGYALNGIFLEALKLFSKMID----LD-YKPNHITFLAVLQACAHSGSL 475
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
++G F M + + ISP ++HY CMVDLL R G L+EA LI NM KP+ +WGALL
Sbjct: 476 EKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLN 535
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
C+IH+N ++A L L+ AA Y V ++NIYA A W +R M + +K
Sbjct: 536 ACKIHRNVKIAEQAAESLF-NLEPQMAAPY-VEMANIYAAAGMWDGFARIRSIMKQRNIK 593
Query: 494 KPPGQSWIQINGVVHDFVAGDMTHKHS---YFIYEILSEIIKQSHV 536
K PG+S IQ+NG H F G+ H + YF LS K HV
Sbjct: 594 KYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDKHV 639
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 166/412 (40%), Gaps = 64/412 (15%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H+ ++ + + T + ++ + + +A K+F + T WN ++ G+ +S
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
K+ +R+M E P+ T L+ + L+ E +H + + G V V
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 155 LINFYAGRGGVEQARHVFDGM--GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
I+ Y G ++ A+ VF+ + G R+VVSWNS+ Y G+ FD
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGE------AFD-------- 239
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
A L+ M R + L GR IH +
Sbjct: 240 -----------------AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+ +Q ++ N I MY+ A +F M R+ VSWT MI +A++G
Sbjct: 283 IH--LGTDQDIEAI---NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGD 337
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
EAL LF M+ G +PD +TL+ ++ C G ++ G+ W I R
Sbjct: 338 MDEALALFHAMIKSGE-----KPDLVTLLSLISGCGKFGSLETGK---------W-IDAR 382
Query: 393 IEHYGC----------MVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ YGC ++D+ S+ G + EA + +N P K W ++ G
Sbjct: 383 ADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK-TVVTWTTMIAG 433
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 128/304 (42%), Gaps = 43/304 (14%)
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
S WN IR + P +S+ +R+M EPN FT+ F+ AC R + E VH
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
++ + S+VFV T ++ + V+ A VF+ M +R +WN++L+G+ G D
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A +F EM + + + + Q +++L L M +
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI--------------- 180
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ--R 315
+LG + V + N I Y CG + A VF + + R
Sbjct: 181 -----RLGVDVQ----------------VTVANTWISTYGKCGDLDSAKLVFEAIDRGDR 219
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ VSW SM A++ G +A GL+ M+ + +PD T I + +C + + +
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLR-----EEFKPDLSTFINLAASCQNPETLTQ 274
Query: 376 GRRI 379
GR I
Sbjct: 275 GRLI 278
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
RR++ + +V +W I + ++L LF EM+R E
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
D+ +H + + ++ V + A + M+ C + A +VF +MP+R +
Sbjct: 66 ADVGCCEMVHAH-----LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATT 120
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
W +M+ F + G +A LF+ M ++ + PD++T++ ++
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREM-----RLNEITPDSVTVMTLI 160
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 149/508 (29%), Positives = 242/508 (47%), Gaps = 43/508 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH+ +L+G ++ ++ KL++ Y +F + + + +I G +
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+ + M PN TY L+AC + EG+Q+H ++ G S + +E+
Sbjct: 237 HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ Y+ CG + A +F+ + VS
Sbjct: 297 LMDMYS-------------------------------KCGSIEDAWTIFESTTEVDEVSM 325
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
T ++ G AQ G ++A+ F M +A VE L LG+ +H V +
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK 385
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
R + N +NN LI+MY+ CG + D+ VF +MP+R+ VSW SMI AFA+ G G
Sbjct: 386 RKFSGN-----TFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGL 440
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
AL L++ M + V+P +T + +L AC H G +D+GR + M GI PR E
Sbjct: 441 AALKLYEEMTTLE-----VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTE 495
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY C++D+L RAG L EA I+++PLKP+ +W ALLG C H ++E+ +L +
Sbjct: 496 HYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLF-Q 554
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
D ++ + +L++NIY+ +W++ ++M MGV K G S I+I H FV D
Sbjct: 555 TAPDSSSAH-ILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVED 613
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPD 542
H + IY++LS + + Y PD
Sbjct: 614 KLHPQAEAIYDVLSGLFPVMVDEGYRPD 641
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Query: 20 FTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST--- 73
+ L +C+ Q ++ QIH+ + G+ + I + L+ Y ++ A +F +
Sbjct: 260 LSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTE 319
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+D S TV I+ G A++ + ++++ + +M+ E + S +L L G
Sbjct: 320 VDEVSMTV---ILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLG 376
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
+Q+H +V+ + + N FV LIN Y+ G + ++ VF M +R+ VSWNS++A +
Sbjct: 377 KQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARH 436
Query: 194 GDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRR 239
G A ++++EM V V++ +++ C+ G + L EM+
Sbjct: 437 GHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKE 486
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 168/417 (40%), Gaps = 74/417 (17%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
LLS Y +L A KLF + N + G+ R+ ++M+ +
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS----G 151
Query: 114 GF---TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARH 170
GF T + +LS C + +H + ++ GY + V LI Y G R
Sbjct: 152 GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM------PIRNVVSWTTMIAGCAQK 224
VFDGM R+V++ ++++G + + R+F M P N V++ + +A C+
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHP--NSVTYLSALAACSGS 269
Query: 225 GRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQP 284
R + G+ IH + + + +
Sbjct: 270 QRIVE-----------------------------------GQQIHALLWKYGI-----ES 289
Query: 285 SVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMV 344
+ + +AL+ MY+ CG I DA+ +F + VS T +++ A+ G +EA+ F M+
Sbjct: 290 ELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Query: 345 SDGAGVDGVRPDAITLIVVLCACCHAGFVDE----GRRIFASMNRTWGISPRIEHYGCMV 400
G +D V+ A F+D G+++ + + + + G ++
Sbjct: 350 QAGVEIDA---------NVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNG-LI 399
Query: 401 DLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDT 457
++ S+ G L ++ + MP K N W +++ H + LA++ KL E+ T
Sbjct: 400 NMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHG-LAAL---KLYEEMTT 451
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 249/473 (52%), Gaps = 17/473 (3%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH+ ++ G NI KLL ++ L +A ++F + P+ + +N++I GY +
Sbjct: 55 KIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHG 114
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSAC-VRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+ + ++M + + +G+T S +L A RG + + +V + +V ++
Sbjct: 115 LVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELD 174
Query: 153 ----TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
T L++ Y G +E AR VF+ M +VV S+++GY++ G + A +F+ +
Sbjct: 175 DVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKV 234
Query: 209 RNVVSWTTMIAGCAQKGR-CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
+++V + M+ G ++ G K+++ ++ M+RA ++G+
Sbjct: 235 KDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQ 294
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
+H + + V + +++ ++L+ MYA CG I DA +VF +M +++ SWTSMI +
Sbjct: 295 VHAQIMKSGVYTH-----IKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
K G +EAL LF M + P+ +T + L AC H+G VD+G IF SM R +
Sbjct: 350 GKNGNPEEALELFTRMKEFR-----IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDY 404
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVV 447
+ P++EHY C+VDL+ RAG L++A MP +P+ +W ALL C +H N ELAS+
Sbjct: 405 SMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIA 464
Query: 448 EPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
+L +L+ D G + LSN+YA +W +V +R+ M + K G+SW
Sbjct: 465 ASELF-KLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 254/528 (48%), Gaps = 48/528 (9%)
Query: 21 TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFY-IASDQLQHAHKLFSTIDN 76
++L+SC N++ L +H VV G+ + +++ Y S ++ A +F I
Sbjct: 116 SVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKV 175
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
+ W +I G+ ++ Y+QM+ AE + + + A + G+Q+
Sbjct: 176 KNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQI 235
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H V+ +G+ SN+ V NSIL Y CG
Sbjct: 236 HASVIKRGFQSNLPV-------------------------------MNSILDLYCRCGYL 264
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
A+ F EM +++++W T+I+ ++ +AL +F
Sbjct: 265 SEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAAC 323
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM-PQR 315
L G+ +H + +R +N V L NALI MYA CG I D+ +VF ++ +R
Sbjct: 324 ANIAALNCGQQLHGRIFRRGFNKN-----VELANALIDMYAKCGNIPDSQRVFGEIVDRR 378
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ VSWTSM++ + G G EA+ LF MVS G +RPD I + VL AC HAG V++
Sbjct: 379 NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG-----IRPDRIVFMAVLSACRHAGLVEK 433
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G + F M +GI+P + Y C+VDLL RAG + EA+ L+E MP KP+++ WGA+LG C
Sbjct: 434 GLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
+ HK++ L S + + V EL Y V+LS IYA +W D VR+ M MG KK
Sbjct: 494 KAHKHNGLISRLAARKVMELKPKMVGTY-VMLSYIYAAEGKWVDFARVRKMMRMMGNKKE 552
Query: 496 PGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
G SWI + V F D ++ +Y +L +I+++ Y P++
Sbjct: 553 AGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPEL 600
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 170/392 (43%), Gaps = 48/392 (12%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
+ T L+ Y ++ A LF + + W +I GYA S+ ++ EC+ +MV
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRG-GVEQA 168
PN FT S +L +C +L G VHG+V+ G +++V+ ++N YA +E A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 169 RHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN--VVSWTTMIAGCAQKGR 226
+F + ++ V+W +++ G+ GD G +++ +M + N V + IA A
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS- 225
Query: 227 CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
+ G+ IH V +R Q ++
Sbjct: 226 --------------------------------IDSVTTGKQIHASVIKRGF-----QSNL 248
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
+ N+++ +Y CG + +A F +M + ++W ++I + EAL +F+ S
Sbjct: 249 PVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFES- 306
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
G P+ T ++ AC + ++ G+++ + R G + +E ++D+ ++
Sbjct: 307 ----QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-GFNKNVELANALIDMYAKC 361
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
G + ++ + + + N W +++ G H
Sbjct: 362 GNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSH 393
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 13/259 (5%)
Query: 185 SILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEX 244
+++ Y G + AR +FDEMP R+VV+WT MI G A +A F EM +
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
L G +H +V + + S+ ++NA+++MYA+C V +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHG-----VVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 305 AY-QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
A +F + ++ V+WT++I F G G L ++K M+ + A V P IT+ V
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVT---PYCITIAVR 221
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
A + V G++I AS+ + G + ++DL R G+L EA M K
Sbjct: 222 ASASIDS--VTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK- 277
Query: 424 NDALWGALLGGCQIHKNSE 442
+ W L+ + +SE
Sbjct: 278 DLITWNTLISELERSDSSE 296
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/499 (30%), Positives = 249/499 (49%), Gaps = 50/499 (10%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLN-GLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
LL +C + ++L I+I S ++ N L +++KL++ + +L A K+F + +
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 78 S---TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
S VW + GY+R+ +P ++ Y M+ + EP F+ S L ACV LR G
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGR 256
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
+H ++ + + V+Q V +N +L Y+ G
Sbjct: 257 GIHAQIVKR------------------KEKVDQ-------------VVYNVLLKLYMESG 285
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
FD AR+VFD M RNVV+W ++I+ ++K R + +LF +M+ +
Sbjct: 286 LFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILP 345
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
L G+ IH + +++++P V L N+L+ MY CG + + +VF M
Sbjct: 346 ACSRVAALLTGKEIHAQI-----LKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLT 400
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+ SW M+ +A G +E + LF+ M+ G V PD IT + +L C G +
Sbjct: 401 KDLASWNIMLNCYAINGNIEEVINLFEWMIESG-----VAPDGITFVALLSGCSDTGLTE 455
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G +F M + +SP +EHY C+VD+L RAG + EA +IE MP KP+ ++WG+LL
Sbjct: 456 YGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS 515
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C++H N + + +L L+ Y V++SNIYA AK W +V +R+ M + GVKK
Sbjct: 516 CRLHGNVSVGEIAAKELFV-LEPHNPGNY-VMVSNIYADAKMWDNVDKIREMMKQRGVKK 573
Query: 495 PPGQSWIQINGVVHDFVAG 513
G SW+Q+ + FVAG
Sbjct: 574 EAGCSWVQVKDKIQIFVAG 592
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 236/489 (48%), Gaps = 44/489 (8%)
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVST-EAEPNGFT 116
Y ++ A LF + + W +I GY ++ + +M + + N T
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+ + AC REG Q+HG+V ++F+ +L++ Y+ G + +A+ VF M
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG- 235
+ VSWNS++ G V A +F++MP +++VSWT MI G + KG + + LFG
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 236 ------------------------------EMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
+M + V DL G
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
IH R+V N + + N+L+ MY CG DAY++F+ + + + VS+ +MI
Sbjct: 458 LQIH----GRVVKMNIVN-DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMIS 512
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
++ G GK+AL LF + S G P+ +T + +L AC H G+VD G + F SM
Sbjct: 513 GYSYNGFGKKALKLFSMLESSGK-----EPNGVTFLALLSACVHVGYVDLGWKYFKSMKS 567
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELAS 445
++ I P +HY CMVDLL R+G LD+A LI MP KP+ +WG+LL + H +LA
Sbjct: 568 SYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAE 627
Query: 446 VVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQING 505
+ KL+ EL+ D A Y V+LS +Y+ + +D + +KK PG SWI + G
Sbjct: 628 LAAKKLI-ELEPDSATPY-VVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKG 685
Query: 506 VVHDFVAGD 514
VH+F+AGD
Sbjct: 686 EVHNFLAGD 694
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 154/357 (43%), Gaps = 34/357 (9%)
Query: 7 VPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQV---VLNGLSQKTNIITK---------- 53
+ S I Q L++ + Q +SQ+ NG Q+ I +
Sbjct: 25 LAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSW 84
Query: 54 --LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPW-KSVECYRQMVSTEA 110
++S Y + ++ A ++F + TT +N +I ++ K+ E + +
Sbjct: 85 IAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDI----P 140
Query: 111 EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVK---GYCSNVFVETNLINFYAGRGGVEQ 167
E N +Y+ +++ VR G E E ++ VK SNV L++ Y G +
Sbjct: 141 EKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNV-----LLSGYLRAGKWNE 195
Query: 168 ARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRC 227
A VF GM + VVS +S++ GY G AR +FD M RNV++WT MI G + G
Sbjct: 196 AVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFF 255
Query: 228 KQALSLFGEMRR-ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
+ LF MR+ V+ + G IH +V+R + +
Sbjct: 256 EDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIH-----GLVSRMPLEFDL 310
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
L N+L+ MY+ G +G+A VF M + +VSW S+I ++ EA LF+ M
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 136/318 (42%), Gaps = 49/318 (15%)
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
+F + I+ +A G +++A +F M RS+VSW ++++ Y G A +VFDEMP+
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 209 R--------------------------------NVVSWTTMIAGCAQKGRCKQALSLFGE 236
R N VS+ TMI G + GR +A L+ E
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
G L+ G+W + V + V ++++H Y
Sbjct: 170 -------TPVKFRDSVASNVLLSGYLRAGKW----NEAVRVFQGMAVKEVVSCSSMVHGY 218
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
G I DA +F +M +R+ ++WT+MI + K G ++ GLF M +G V+ +
Sbjct: 219 CKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG----DVKVN 274
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
+ TL V+ AC EG +I ++R + + ++ + S+ G++ EA +
Sbjct: 275 SNTLAVMFKACRDFVRYREGSQIHGLVSRM-PLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 417 ENMPLKPNDALWGALLGG 434
M K + W +L+ G
Sbjct: 334 GVMKNK-DSVSWNSLITG 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 89/193 (46%), Gaps = 4/193 (2%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T ++ + ++ +LF + W +I + + +++ + +M+ E
Sbjct: 376 TDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
PN +T+S +LSA L EG Q+HG V+ +++ V+ +L++ Y G A +
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRC 227
F + + ++VS+N++++GY G A ++F + N V++ +++ C G
Sbjct: 496 FSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYV 555
Query: 228 KQALSLFGEMRRA 240
F M+ +
Sbjct: 556 DLGWKYFKSMKSS 568
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L + ++ +LI QIH +VV + ++ L+S Y A+K+FS I P
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP 502
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+ +N +I GY+ + K+++ + + S+ EPNG T+ LLSACV G + G
Sbjct: 503 NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 238/475 (50%), Gaps = 42/475 (8%)
Query: 29 IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRG 88
++N I IH + NGL + + L+ Y ++ A K+F I ++ +W +++G
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKG 184
Query: 89 YARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN 148
Y + + + M T + T L+ AC + G+ VHG+ + + +
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF--- 241
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
++Q+ ++ SI+ YV C D AR++F+
Sbjct: 242 ----------------IDQSDYL-----------QASIIDMYVKCRLLDNARKLFETSVD 274
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
RNVV WTT+I+G A+ R +A LF +M R + G L+ G+ +
Sbjct: 275 RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
H Y+ RN + + I MYA CG I A VF MP+R+ +SW+SMI AF
Sbjct: 335 HGYM-----IRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFG 389
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWG 388
GL +EAL F M S V P+++T + +L AC H+G V EG + F SM R +G
Sbjct: 390 INGLFEEALDCFHKMKSQN-----VVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYG 444
Query: 389 ISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
+ P EHY CMVDLL RAG + EA I+NMP+KP + WGALL C+IHK +LA +
Sbjct: 445 VVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIA 504
Query: 449 PKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
KL++ ++ + ++ Y VLLSNIYA A W+ V VR+KM G +K GQS ++
Sbjct: 505 EKLLS-MEPEKSSVY-VLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 199/457 (43%), Gaps = 52/457 (11%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID--N 76
+ T+L + + Q+H++V+++G + + + L + YI S++L A F+ I
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 77 PSTTVWNHIIRGYARSHTPWKS--VECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
+ WN I+ GY++S T S + Y +M + F F + ACV GLL G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
+HG+ + G + +V +L+ YA G +E A+ VFD + R+ V W ++ GY+
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
R+F M G AL+L ++
Sbjct: 190 KDPEVFRLFCLM---------------RDTGLALDALTLICLVKAC-------------- 220
Query: 255 XXXXXGDL---KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
G++ K+G+ +H + R+ S L ++I MY C ++ +A ++F
Sbjct: 221 -----GNVFAGKVGKCVHGVS----IRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET 271
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
R+ V WT++I FAK EA LF+ M+ + + P+ TL +L +C G
Sbjct: 272 SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR-----ESILPNQCTLAAILVSCSSLG 326
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
+ G+ + M R GI ++ +D+ +R G + A + + MP + N W ++
Sbjct: 327 SLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSM 384
Query: 432 LGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
+ I+ E A K+ ++ + ++ LLS
Sbjct: 385 INAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLS 421
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 11/194 (5%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSF 57
ML E +P Q + +L SC+++ +L +H ++ NG+ T +
Sbjct: 303 MLRESILPN------QCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDM 356
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
Y +Q A +F + + W+ +I + + ++++C+ +M S PN T+
Sbjct: 357 YARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTF 416
Query: 118 SFLLSACVRGGLLREG-EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
LLSAC G ++EG +Q + G +++ G + +A+ D M
Sbjct: 417 VSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMP 476
Query: 177 QRSVVS-WNSILAG 189
+ + S W ++L+
Sbjct: 477 VKPMASAWGALLSA 490
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 251/510 (49%), Gaps = 41/510 (8%)
Query: 26 CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV-WNH 84
C+ + + Q+H V G +++ +++Y L+ A +F +D V WN
Sbjct: 151 CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNS 210
Query: 85 IIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKG 144
+I Y + K++ Y++M+ + + FT + +L+A L G Q HG ++ G
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 145 YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFD 204
+ N V + LI+FY+ GG DGM +D + +VF
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGC-------DGM--------------------YD-SEKVFQ 302
Query: 205 EMPIRNVVSWTTMIAGCAQKGR-CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLK 263
E+ ++V W TMI+G + ++A+ F +M+R
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 264 LGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSM 323
+ IH + + N+ + +NNALI +Y G + DA VF +MP+ + VS+ M
Sbjct: 363 QCKQIHGLAIKSHIPSNR----ISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCM 418
Query: 324 IMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASM 383
I +A+ G G EAL L++ M+ G + P+ IT + VL AC H G VDEG+ F +M
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLDSG-----IAPNKITFVAVLSACAHCGKVDEGQEYFNTM 473
Query: 384 NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSEL 443
T+ I P EHY CM+DLL RAG L+EA I+ MP KP W ALLG C+ HKN L
Sbjct: 474 KETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMAL 533
Query: 444 ASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
A +L+ AA V+L+N+YA A++W+++ +VR+ M ++K PG SWI++
Sbjct: 534 AERAANELMVMQPL--AATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEV 591
Query: 504 NGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
H FVA D +H + E L E++K+
Sbjct: 592 KKKKHVFVAEDWSHPMIREVNEYLEEMMKK 621
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 36/357 (10%)
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
+ TPWK ++ + AE + FT G+ +H + + S+ ++
Sbjct: 2 NQTPWKFKTFRDLLLKSVAERDLFT----------------GKSLHALYVKSIVASSTYL 45
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
+ +N Y+ G + AR F + +V S+N I+ Y AR++FDE+P +
Sbjct: 46 SNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDT 105
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
VS+ T+I+G A A+ LF MR+ E DL + +H +
Sbjct: 106 VSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCF 163
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ-RSTVSWTSMIMAFAKQ 330
+ SV NNA + Y+ G++ +A VF M + R VSW SMI+A+ +
Sbjct: 164 ---SVSGGFDSYSSV--NNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQH 218
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G +AL L+K M+ G + D TL VL A + GR+ + + G
Sbjct: 219 KEGAKALALYKEMI-----FKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA-GFH 272
Query: 391 PRIEHYGCMVDLLSRAGFLD---EAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
++D S+ G D ++ + + + L P+ +W ++ G + N EL+
Sbjct: 273 QNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGYSM--NEELS 326
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 157/378 (41%), Gaps = 53/378 (14%)
Query: 49 NIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVST 108
N+I K Y ++ A +LF I P T +N +I GYA + + ++ +++M
Sbjct: 78 NVIVKA---YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKL 134
Query: 109 EAEPNGFTYSFLLSACV-RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQ 167
E +GFT S L++AC R L++ Q+H + G+ S V + +Y+ G + +
Sbjct: 135 GFEVDGFTLSGLIAACCDRVDLIK---QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 168 ARHVFDGMGQ-RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGR 226
A VF GM + R VSWNS++ Y Q
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAY-------------------------------GQHKE 220
Query: 227 CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
+AL+L+ EM + L GR H +++ Q S
Sbjct: 221 GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH----GKLIKAGFHQNS- 275
Query: 287 RLNNALIHMYASCG---VIGDAYQVFTKMPQRSTVSWTSMIMAFA-KQGLGKEALGLFKT 342
+ + LI Y+ CG + D+ +VF ++ V W +MI ++ + L +EA+ F+
Sbjct: 276 HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQ 335
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
M G RPD + + V AC + + ++I ++ S RI ++ L
Sbjct: 336 MQRIGH-----RPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISL 390
Query: 403 LSRAGFLDEAHGLIENMP 420
++G L +A + + MP
Sbjct: 391 YYKSGNLQDARWVFDRMP 408
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 15/236 (6%)
Query: 19 VFTL---LQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYI---ASDQLQHAHK 69
+FTL L + ++ +LI Q H +++ G Q +++ + L+ FY D + + K
Sbjct: 240 MFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEK 299
Query: 70 LFSTIDNPSTTVWNHIIRGYA-RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
+F I +P VWN +I GY+ ++V+ +RQM P+ ++ + SAC
Sbjct: 300 VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLS 359
Query: 129 LLREGEQVHGIVLVKGYCSN-VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
+ +Q+HG+ + SN + V LI+ Y G ++ AR VFD M + + VS+N ++
Sbjct: 360 SPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMI 419
Query: 188 AGYVSCGDFDGA----RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
GY G A +R+ D N +++ +++ CA G+ + F M+
Sbjct: 420 KGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
R + ++P+V N ++ YA I A Q+F ++PQ TVS+ ++I +A
Sbjct: 63 RAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETF 122
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC---------HAGFVDEGRRIFASMNR 385
A+ LFK M G VDG TL ++ ACC H V G ++S+N
Sbjct: 123 AAMVLFKRMRKLGFEVDG-----FTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNN 177
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELAS 445
+ V S+ G L EA + M ++ W +++ HK A
Sbjct: 178 AF------------VTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 446 VVEPKLV 452
+ +++
Sbjct: 226 ALYKEMI 232
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 265/532 (49%), Gaps = 55/532 (10%)
Query: 21 TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+ L++C ++ L Q +H V GL + + + L+ Y ++ A K+FS++
Sbjct: 534 STLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
S N +I GY++++ ++V +++M++ P+ T++ ++ AC + L G Q H
Sbjct: 594 SVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 138 GIVLVKGYCSN-VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
G + +G+ S ++ +L+ Y G+ +A +F +
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP------------------ 694
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
+++V WT M++G +Q G ++AL + EMR V
Sbjct: 695 ------------KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
L+ GR IH + +A + + + +N LI MYA CG + + QVF +M +RS
Sbjct: 743 SVLSSLREGRAIHSLIFH--LAHDLDELT---SNTLIDMYAKCGDMKGSSQVFDEMRRRS 797
Query: 317 TV-SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
V SW S+I +AK G ++AL +F +M + PD IT + VL AC HAG V +
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSH-----IMPDEITFLGVLTACSHAGKVSD 852
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
GR+IF M +GI R++H CMVDLL R G+L EA IE LKP+ LW +LLG C
Sbjct: 853 GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
+IH + + KL+ EL+ ++ Y VLLSNIYA W+ A+R+ M + GVKK
Sbjct: 913 RIHGDDIRGEISAEKLI-ELEPQNSSAY-VLLSNIYASQGCWEKANALRKVMRDRGVKKV 970
Query: 496 PGQSWIQINGVVHDFVAGDMTH----KHSYFIYEILSEIIKQSHVDSYEPDI 543
PG SWI + H F AGD +H K F+ E L +++K V PDI
Sbjct: 971 PGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFL-EDLYDLMKDDAV--VNPDI 1019
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 188/429 (43%), Gaps = 47/429 (10%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
S +S + + ++L + + NL + +H++ + GL+ + + L+S Y ++++
Sbjct: 321 SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEA 380
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
A K+F ++ + WN +IRGYA + K +E + M S+ + FT++ LLS C
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 127 GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
L G Q H I++ K N+FV L++ YA
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA-------------------------- 474
Query: 187 LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
CG + AR++F+ M R+ V+W T+I Q +A LF M +
Sbjct: 475 -----KCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
L G+ +H + + R+ S +LI MY+ CG+I DA
Sbjct: 530 ACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGS-----SLIDMYSKCGIIKDAR 584
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
+VF+ +P+ S VS ++I +++ L +EA+ LF+ M++ GV P IT ++ A
Sbjct: 585 KVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLT-----RGVNPSEITFATIVEA 638
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYG-CMVDLLSRAGFLDEAHGLIENMPLKPND 425
C + G + + + G S E+ G ++ + + + EA L + +
Sbjct: 639 CHKPESLTLGTQFHGQITKR-GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSI 697
Query: 426 ALWGALLGG 434
LW ++ G
Sbjct: 698 VLWTGMMSG 706
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 195/462 (42%), Gaps = 49/462 (10%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+HS+ ++ G+ + + ++ Y Q+ +A K F ++ T WN ++ Y+
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSSIGK 140
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
P K + + + + PN FT+S +LS C R + G Q+H ++ G N +
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGA 200
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC--------------------- 193
L++ YA + AR VF+ + + V W + +GYV
Sbjct: 201 LVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPD 260
Query: 194 --------------GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
G AR +F EM +VV+W MI+G ++G A+ F MR+
Sbjct: 261 HLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK 320
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
+ V+ +L LG +H + +A N + + ++L+ MY+ C
Sbjct: 321 SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN-----IYVGSSLVSMYSKC 375
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
+ A +VF + +++ V W +MI +A G + + LF M S G +D T
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD-----FT 430
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+L C + ++ G + F S+ ++ + +VD+ ++ G L++A + E M
Sbjct: 431 FTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 420 PLKPNDALWGALLGG-CQIHKNSELASVVEPKLVAELDTDGA 460
+ N W ++G Q SE + + + + +DGA
Sbjct: 490 CDRDN-VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 190/437 (43%), Gaps = 49/437 (11%)
Query: 22 LLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+L +C N++ QIH ++ GL + + L+ Y D++ A ++F I +P+
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
T W + GY ++ P ++V + +M P+ + +++ +R G L++ + G
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFG 285
Query: 139 I----------VLVKGY----CSNVFVE-------TNLINFYAGRGGVEQARHVFDGMGQ 177
V++ G+ C V +E +++ + + G V A + +
Sbjct: 286 EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDL 345
Query: 178 RSVVSWNSILAG--------------YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQ 223
VV +I G Y C + A +VF+ + +N V W MI G A
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 224 KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQ 283
G + + LF +M+ + DL++G H + ++ +A+N
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN--- 462
Query: 284 PSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
+ + NAL+ MYA CG + DA Q+F +M R V+W ++I ++ + EA LFK M
Sbjct: 463 --LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
+ G+ D L L AC H + +G+++ ++ G+ + ++D+
Sbjct: 521 -----NLCGIVSDGACLASTLKACTHVHGLYQGKQVHC-LSVKCGLDRDLHTGSSLIDMY 574
Query: 404 SRAGFLDEAHGLIENMP 420
S+ G + +A + ++P
Sbjct: 575 SKCGIIKDARKVFSSLP 591
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 140/349 (40%), Gaps = 68/349 (19%)
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
LR G+ VH L+ G S + +++ YA V A FD + ++ V +WNS+L+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 190 YVSCGDFDGARR----VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
Y S G R +F+ N +++ +++ CA R VE
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCA---------------RETNVE-- 177
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
GR IH + + + RN AL+ MYA C I DA
Sbjct: 178 ------------------FGRQIHCSMIKMGLERNSY-----CGGALVDMYAKCDRISDA 214
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
+VF + +TV WT + + K GL +EA+ +F+ M +G RPD + + V+
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH-----RPDHLAFVTVIN 269
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM---PLK 422
G + + R +F M+ SP + + M+ + G A NM +K
Sbjct: 270 TYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 423 PNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIY 471
+ G++L I N +L VV + + L L SNIY
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLVVHAEAIK----------LGLASNIY 363
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 238/503 (47%), Gaps = 48/503 (9%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH + + L+ L Y L A ++F I+ P T WN II G A +
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++V + QM S+ P+ + LL A + L +G Q+H ++ G+ +++ V
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV-- 408
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN--- 210
NS+L Y C D +F++ RN
Sbjct: 409 -----------------------------CNSLLTMYTFCSDLYCCFNLFED--FRNNAD 437
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
VSW T++ C Q + + L LF M + E LKLG +H
Sbjct: 438 SVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHC 497
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
Y + +A P + N LI MYA CG +G A ++F M R VSW+++I+ +A+
Sbjct: 498 YSLKTGLA-----PEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQS 552
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G G+EAL LFK M S G+ P+ +T + VL AC H G V+EG +++A+M GIS
Sbjct: 553 GFGEEALILFKEMKS-----AGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
P EH C+VDLL+RAG L+EA I+ M L+P+ +W LL C+ N LA
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 451 LVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDF 510
++ ++D + + VLL +++A + W++ +R M + VKK PGQSWI+I +H F
Sbjct: 668 IL-KIDPFNSTAH-VLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIF 725
Query: 511 VAGDMTHKHSYFIYEILSEIIKQ 533
A D+ H IY +L I Q
Sbjct: 726 FAEDIFHPERDDIYTVLHNIWSQ 748
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV-WNHIIRGYAR 91
+QIHS ++ G + LL+ Y L LF N + +V WN I+ +
Sbjct: 391 MQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQ 450
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
P + + ++ M+ +E EP+ T LL CV L+ G QVH L G F+
Sbjct: 451 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFI 510
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-- 209
+ LI+ YA G + QAR +FD M R VVSW++++ GY G + A +F EM
Sbjct: 511 KNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGI 570
Query: 210 --NVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
N V++ ++ C+ G ++ L L+ M+
Sbjct: 571 EPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 181/442 (40%), Gaps = 45/442 (10%)
Query: 21 TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+L+ +C++ ++L Q IH ++ + T + +LS Y L+ A ++F +
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ + +I GY+++ +++ Y +M+ + P+ F + ++ AC + G+Q+H
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
V+ S++ + LI Y + A VF G+ + ++SW+SI+AG+ G
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A EM V I G + K C L
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKA-CSSLLR------------------------- 285
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G IH + +A N +L MYA CG + A +VF ++ + T
Sbjct: 286 ----PDYGSQIHGLCIKSELAGNAIAGC-----SLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
SW +I A G EA+ +F M S G PDAI+L +LCA + +G
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRS-----SGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
+I + + + WG + ++ + + L L E+ + W +L C
Sbjct: 392 QIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQ 450
Query: 438 HKNS-ELASVVEPKLVAELDTD 458
H+ E+ + + LV+E + D
Sbjct: 451 HEQPVEMLRLFKLMLVSECEPD 472
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 195/448 (43%), Gaps = 72/448 (16%)
Query: 1 MLIERFVPASGRRSIQQHVF-TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITK--L 54
ML E VP Q F +++++C + ++ Q+H+QV+ L +++I + L
Sbjct: 159 MLQEDLVP-------DQFAFGSIIKACASSSDVGLGKQLHAQVI--KLESSSHLIAQNAL 209
Query: 55 LSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPN 113
++ Y+ +Q+ A ++F I W+ II G+++ ++++ ++M+S PN
Sbjct: 210 IAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPN 269
Query: 114 GFTYSFLLSACVRGGLLRE--GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
+ + L AC LLR G Q+HG+ + N +L + YA G + AR V
Sbjct: 270 EYIFGSSLKAC--SSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRV 327
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP----IRNVVSWTTMIAGCAQKGRC 227
FD + + SWN I+AG + G D A VF +M I + +S +++ CAQ
Sbjct: 328 FDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQTK-- 383
Query: 228 KQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVR 287
ALS G IH Y+ + + +
Sbjct: 384 PMALS-------------------------------QGMQIHSYIIKWGFLAD-----LT 407
Query: 288 LNNALIHMYASCGVIGDAYQVFTKMPQRS-TVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
+ N+L+ MY C + + +F + +VSW +++ A + E L LFK M+
Sbjct: 408 VCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLML-- 465
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
V PD IT+ +L C + G ++ +T G++P ++D+ ++
Sbjct: 466 ---VSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKC 521
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGG 434
G L +A + ++M + + W L+ G
Sbjct: 522 GSLGQARRIFDSMDNR-DVVSWSTLIVG 548
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 165/569 (28%), Positives = 263/569 (46%), Gaps = 85/569 (14%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT 80
+L+ S + L QIH+++++ GL +ITKL+ + + A ++F + P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 85
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
WN IIRGY+R++ ++ Y M P+ FT+ LL AC L+ G VH V
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 141 LVKGYCSNVFVE---------------------------------TNLINFYAGRGGVEQ 167
G+ ++VFV+ T +++ YA G +
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 168 ARHVFDGMGQRSV----VSWNSILAG---------------------------------- 189
A +F M + V V+ S+L
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 190 -YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
Y CG A+ +FD+M N++ W MI+G A+ G ++A+ +F EM V
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G L+ R ++ YV R+ + V +++ALI M+A CG + A V
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYV-----GRSDYRDDVFISSALIDMFAKCGSVEGARLV 380
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F + R V W++MI+ + G +EA+ L++ M G V P+ +T + +L AC
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG-----VHPNDVTFLGLLMACN 435
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
H+G V EG F M I+P+ +HY C++DLL RAG LD+A+ +I+ MP++P +W
Sbjct: 436 HSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
GALL C+ H++ EL +L + +D G+ V LSN+YA A+ W V VR +M
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFS-IDPSN-TGHYVQLSNLYAAARLWDRVAEVRVRMK 552
Query: 489 EMGVKKPPGQSWIQINGVVHDFVAGDMTH 517
E G+ K G SW+++ G + F GD +H
Sbjct: 553 EKGLNKDVGCSWVEVRGRLEAFRVGDKSH 581
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 142/316 (44%), Gaps = 40/316 (12%)
Query: 19 VFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ ++L + +Q+L Q IH+ VV GL + +++ L + Y Q+ A LF +
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+P+ +WN +I GYA++ ++++ + +M++ + P+ + + +SAC + G L +
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
++ V Y +VF+ + LI+ +A G VE AR VFD R VV W++++ GY
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY----- 399
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
GR ++A+SL+ M R V
Sbjct: 400 --------------------------GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
G ++ G W+ R+ A ++ P + +I + G + AY+V MP +
Sbjct: 434 CNHSGMVREG----WWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 316 STVS-WTSMIMAFAKQ 330
V+ W +++ A K
Sbjct: 489 PGVTVWGALLSACKKH 504
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 259/529 (48%), Gaps = 54/529 (10%)
Query: 29 IQNLIQIHSQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIR 87
I+N ++++ +S+K + T ++ Y ++ A++LF + + W +I
Sbjct: 211 IENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMIS 270
Query: 88 GYARSHTPWKSVECYRQMVST--EAEPNGFTYSFLLSACVRGGL----LREGEQVHGIVL 141
G+A + +++ + +M PNG T L AC GGL R GEQ+H V+
Sbjct: 271 GFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC--GGLGVEFRRLGEQLHAQVI 328
Query: 142 VKG-----------------YCSNVFVETN---------------LINFYAGRGGVEQAR 169
G Y S+ + + +IN Y G +E+A
Sbjct: 329 SNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAE 388
Query: 170 HVFDGMGQ-RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK 228
+F+ + VSW S++ GY+ GD A +F ++ ++ V+WT MI+G Q
Sbjct: 389 TLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFA 448
Query: 229 QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRL 288
+A SL +M R ++ +L G+ IH + + + P + L
Sbjct: 449 EAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYD---PDLIL 505
Query: 289 NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
N+L+ MYA CG I DAY++F KM Q+ TVSW SMIM + GL +AL LFK M+ G
Sbjct: 506 QNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK 565
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
+P+++T + VL AC H+G + G +F +M T+ I P I+HY M+DLL RAG
Sbjct: 566 -----KPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGK 620
Query: 409 LDEAHGLIENMPLKPNDALWGALLGGCQIH---KNSELASVVEPKLVAELDTDGAAGYLV 465
L EA I +P P+ ++GALLG C ++ K++E + + ELD A G+ V
Sbjct: 621 LKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGH-V 679
Query: 466 LLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
L N+YA R +R++M GVKK PG SW+ +NG + F++GD
Sbjct: 680 ALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGD 728
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 208/500 (41%), Gaps = 107/500 (21%)
Query: 35 IHSQVVLNGLSQKTNI-----ITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGY 89
+H++ +L+ + Q+ +I T LLS Y + L A LF + + N ++ GY
Sbjct: 59 VHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGY 118
Query: 90 ARSHTPWKSVECYRQMV------------------STEA--------EPNGFTYSFLLSA 123
+ ++ +R+M S +A E N +++ L++
Sbjct: 119 VKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTG 178
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
+R G + + +QV + + +V +I Y G+E+A+ +F M +++VV+W
Sbjct: 179 LIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTW 234
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
S++ GY GD A R+F EMP RN+VSWT MI+G A ++AL LF EM++ V+
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKK-DVD 293
Query: 244 XXXXXXXXXXXXXXXXGDL-----KLGRWIHWYVQQRIVARNQQ--QPSVRLNNALIHMY 296
G L +LG +H ++++ + RL +L+HMY
Sbjct: 294 AVSPNGETLISLAYACGGLGVEFRRLGEQLH----AQVISNGWETVDHDGRLAKSLVHMY 349
Query: 297 ASCGVIGDAYQVFTK-------------------------MPQR-----STVSWTSMIMA 326
AS G+I A + + + +R VSWTSMI
Sbjct: 350 ASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDG 409
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVD---------------------------GVRPDAIT 359
+ + G A GLF+ + D GV G++P T
Sbjct: 410 YLEAGDVSRAFGLFQKL-HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNST 468
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGI-SPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
V+L + +D+G+ I + +T P + +V + ++ G +++A+ +
Sbjct: 469 YSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAK 528
Query: 419 MPLKPNDALWGALLGGCQIH 438
M ++ + W +++ G H
Sbjct: 529 M-VQKDTVSWNSMIMGLSHH 547
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 120/284 (42%), Gaps = 65/284 (22%)
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRS----VVSWNSILAGYVSCGDFDGARRVFDEMP 207
E LI GG+ ARH+ D + QR VV W S+L+ Y G D AR +F+ MP
Sbjct: 45 EEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP 104
Query: 208 IR------------------------------NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
R NVVSWT M+ GR + A+ LF EM
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEM 164
Query: 238 RRARVEXXXXXXXXXXXXXXXXGDLKLGR-------------W---IHWYVQQ------R 275
E GD++ + W I Y++ +
Sbjct: 165 P----ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAK 220
Query: 276 IVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKE 335
++ + + +V ++++ Y G + +AY++F +MP+R+ VSWT+MI FA L +E
Sbjct: 221 LLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE 280
Query: 336 ALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
AL LF M D VD V P+ TLI + AC G E RR+
Sbjct: 281 ALMLFLEMKKD---VDAVSPNGETLISLAYAC--GGLGVEFRRL 319
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 25/236 (10%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNII-------------TKLLSFYIASDQLQHAHK 69
LQSCN I N + + NG ++ + T ++ Y+ + + A
Sbjct: 368 LQSCNIIIN------RYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFG 421
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
LF + + W +I G ++ ++ MV +P TYS LLS+
Sbjct: 422 LFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 130 LREGEQVHGIVLVKGYC--SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
L +G+ +H ++ C ++ ++ +L++ YA G +E A +F M Q+ VSWNS++
Sbjct: 482 LDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMI 541
Query: 188 AGYVSCGDFDGARRVFDEM----PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
G G D A +F EM N V++ +++ C+ G + L LF M+
Sbjct: 542 MGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE 597
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITK--LLSFYIASDQLQ 65
G + + LL S NL Q IH + ++I + L+S Y ++
Sbjct: 461 GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A+++F+ + T WN +I G + K++ +++M+ + +PN T+ +LSAC
Sbjct: 521 DAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS 580
Query: 126 RGGLLREGEQV 136
GL+ G ++
Sbjct: 581 HSGLITRGLEL 591
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/524 (29%), Positives = 266/524 (50%), Gaps = 23/524 (4%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNG-LSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
+ ++L C + +L +IHS ++ + L + T++ L+SFY A+ FS +
Sbjct: 333 IISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM 392
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
WN I+ +A S ++ + +++ + T LL C+ + + +
Sbjct: 393 STKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVK 452
Query: 135 QVHGIVLVKGYCSN---VFVETNLINFYAGRGGVEQARHVFDGMGQR-SVVSWNSILAGY 190
+VHG + G + + L++ YA G VE A +F G+ +R ++VS+NS+L+GY
Sbjct: 453 EVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGY 512
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
V+ G D A+ +F EM ++ +W+ M+ A+ +A+ +F E++ +
Sbjct: 513 VNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIM 572
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
L L R H Y+ + + +RL L+ +YA CG + AY VF
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGGLG------DIRLKGTLLDVYAKCGSLKHAYSVFQ 626
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+R V +T+M+ +A G GKEAL ++ M ++PD + + +L ACCHA
Sbjct: 627 SDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESN-----IKPDHVFITTMLTACCHA 681
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G + +G +I+ S+ G+ P +E Y C VDL++R G LD+A+ + MP++PN +WG
Sbjct: 682 GLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGT 741
Query: 431 LLGGCQIHKNSELA-SVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
LL C + +L SV L AE D G VL+SN+YA +W+ V+ +R M +
Sbjct: 742 LLRACTTYNRMDLGHSVANHLLQAESDDTGNH---VLISNMYAADAKWEGVMELRNLMKK 798
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
+KKP G SW++++G + FV+GD +H I+++++ + Q
Sbjct: 799 KEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQ 842
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 160/391 (40%), Gaps = 46/391 (11%)
Query: 2 LIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFY 58
++ F SG + + ++++C ++ +L +H V G + + +L+ Y
Sbjct: 7 FVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMY 66
Query: 59 IASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTY 117
++ K+F +D+ VWN ++ G + S +++ ++ M + E +P+ T+
Sbjct: 67 AKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTF 125
Query: 118 SFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ 177
+ +L CVR G G+ +H ++ G + V L++ YA G +
Sbjct: 126 AIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI------------ 173
Query: 178 RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
F A FD + ++VVSW +IAG ++ A F M
Sbjct: 174 ------------------FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM 215
Query: 238 RRARVEXXXXXXXXXXXXXXXXGD---LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
+ E + GR IH YV QR + Q V + N+L+
Sbjct: 216 LKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQR----SWLQTHVFVCNSLVS 271
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
Y G I +A +FT+M + VSW +I +A +A LF +V G V
Sbjct: 272 FYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG----DVS 327
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
PD++T+I +L C + G+ I + + R
Sbjct: 328 PDSVTIISILPVCAQLTDLASGKEIHSYILR 358
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/472 (31%), Positives = 228/472 (48%), Gaps = 47/472 (9%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H G S + T +L Y S + +A ++F + W+ +I GY +
Sbjct: 227 VHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEM 286
Query: 95 PWKSVECYRQMVSTE--AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
++ E + QM+ + A +L C R G L G VH + G+ ++ V+
Sbjct: 287 IKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQ 346
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
+I+FYA G + C F R F E+ +++V+
Sbjct: 347 NTIISFYAKYGSL---------------------------CDAF----RQFSEIGLKDVI 375
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
S+ ++I GC R +++ LF EMR + + L G H Y
Sbjct: 376 SYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYC 435
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
A N + NAL+ MY CG + A +VF M +R VSW +M+ F GL
Sbjct: 436 VVHGYAVNTS-----ICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGL 490
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR-TWGISP 391
GKEAL LF +M G V PD +TL+ +L AC H+G VDEG+++F SM+R + + P
Sbjct: 491 GKEALSLFNSMQETG-----VNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIP 545
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKL 451
RI+HY CM DLL+RAG+LDEA+ + MP +P+ + G LL C +KN+EL + V K+
Sbjct: 546 RIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKM 605
Query: 452 VAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
+ +T + LVLLSN Y+ A+RW+D +R + G+ K PG SW+ +
Sbjct: 606 QSLGETTES---LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 185/433 (42%), Gaps = 45/433 (10%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
SG R + +L++C ++ + IHS V + + + T L+ FY +L+
Sbjct: 97 SGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEM 156
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACV 125
A K+F + WN +I G++ + + M + PN T + A
Sbjct: 157 AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALG 216
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
R G LREG+ VHG G+ +++ V+T +++ YA + AR VFD +++ V+W++
Sbjct: 217 RAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSA 276
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
++ GYV A VF +M + + V+ T +A L L G R
Sbjct: 277 MIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA---------IGLILMGCAR------- 320
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
GDL GR +H Y + + + + N +I YA G + DA
Sbjct: 321 -------------FGDLSGGRCVHCYAVKAGFILD-----LTVQNTIISFYAKYGSLCDA 362
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
++ F+++ + +S+ S+I +E+ LF M + G+RPD TL+ VL
Sbjct: 363 FRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRT-----SGIRPDITTLLGVLT 417
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC H + G G + ++D+ ++ G LD A + + M K +
Sbjct: 418 ACSHLAALGHGSSCHGYC-VVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDI 475
Query: 426 ALWGALLGGCQIH 438
W +L G IH
Sbjct: 476 VSWNTMLFGFGIH 488
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 166/355 (46%), Gaps = 46/355 (12%)
Query: 20 FTLLQSCNNIQNLIQ---IHSQVVLNGLS-QKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+LL++C +NL+ IH ++ L+ + ++ L Y + ++++ A +F I
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 76 NP--STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+P + W+ +IR YA + K+++ Y +M+++ P +TY F+L AC + +G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
+ +H V + ++++V T L++FYA C
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYA-------------------------------KC 151
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR-VEXXXXXXXXX 252
G+ + A +VFDEMP R++V+W MI+G + + LF +MRR +
Sbjct: 152 GELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G L+ G+ +H Y R + + ++ +YA I A +VF
Sbjct: 212 FPALGRAGALREGKAVHGY-----CTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLD 266
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGL-FKTMVSDGAGVDGVRPDAITLIVVLCA 366
+++ V+W++MI + + + KEA + F+ +V+D + V P AI LI++ CA
Sbjct: 267 FKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAM--VTPVAIGLILMGCA 319
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 157/578 (27%), Positives = 267/578 (46%), Gaps = 77/578 (13%)
Query: 31 NLIQIHSQVVLNGLSQKTNIIT--KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRG 88
NL+ ++ + + + + NII+ L+S Y+ + ++ A K+F + + W +++G
Sbjct: 61 NLMPRDARKLFDEMPDR-NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKG 119
Query: 89 YARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL----------SACVRGGLLREGEQVHG 138
Y + V+ + E N +++ +L AC ++ + + +
Sbjct: 120 YVHN----GKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIAR 175
Query: 139 IVLVKGYCS-----------------NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
++ G C +V T ++ Y V+ AR +FD M +++ V
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV 235
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK------------- 228
SW S+L GYV G + A +F+ MP++ V++ MI+G QKG
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 229 ------------------QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
+AL LF M++ V L G+ +H
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
+ R Q V + + L+ MY CG + + +F + P + + W S+I +A
Sbjct: 356 QL-----VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
GLG+EAL +F M G+ +P+ +T + L AC +AG V+EG +I+ SM +G+
Sbjct: 411 GLGEEALKVFCEMPLSGS----TKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVK 466
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
P HY CMVD+L RAG +EA +I++M ++P+ A+WG+LLG C+ H ++A K
Sbjct: 467 PITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKK 526
Query: 451 LVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDF 510
L+ E++ + + Y +LLSN+YA RW DV +R+ M V+K PG SW ++ VH F
Sbjct: 527 LI-EIEPENSGTY-ILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAF 584
Query: 511 VAGDM-THKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
G + +H I +IL E+ Y PD + A
Sbjct: 585 TRGGINSHPEQESILKILDELDGLLREAGYNPDCSYAL 622
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 174/395 (44%), Gaps = 35/395 (8%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
++ A KLF + D+ S + WN ++ GY + P + + + +M + N +++ L+S
Sbjct: 32 KIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----PDRNIISWNGLVS 87
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
++ G + E +V ++ + NV T L+ Y G V+ A +F M +++ VS
Sbjct: 88 GYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVS 143
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
W +L G++ G D A ++++ +P ++ ++ T+MI G ++GR +A +F EM V
Sbjct: 144 WTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV 203
Query: 243 EXXXXXXXXXXXXXXXXGDLKL------GRWIHW------YVQQRIVARNQQ-------Q 283
K+ + W YVQ + ++ +
Sbjct: 204 ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK 263
Query: 284 PSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
P + NA+I G I A +VF M +R+ SW ++I + G EAL LF M
Sbjct: 264 PVIAC-NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
GVRP TLI +L C + G+++ A + R + ++ +
Sbjct: 323 QK-----QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC-QFDVDVYVASVLMTMY 376
Query: 404 SRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
+ G L ++ + + P K + +W +++ G H
Sbjct: 377 IKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASH 410
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 141/337 (41%), Gaps = 72/337 (21%)
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCA 222
G + +AR +FD +S+ SWNS++AGY + AR++FDEMP RN++SW +++G
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYM 90
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
+ G +A +F M V + W
Sbjct: 91 KNGEIDEARKVFDLMPERNV-------------------------VSW------------ 113
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
AL+ Y G + A +F KMP+++ VSWT M++ F + G +A L++
Sbjct: 114 -------TALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYE- 165
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
M+ D D I ++ C G VDE R IF M+ I+ + MV
Sbjct: 166 MIPD--------KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVIT-----WTTMVTG 212
Query: 403 LSRAGFLDEAHGLIENMPLKPNDALWGALLGGC----QIHKNSELASVVEPKLV----AE 454
+ +D+A + + MP K + W ++L G +I EL V+ K V A
Sbjct: 213 YGQNNRVDDARKIFDVMPEK-TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAM 271
Query: 455 LDTDGAAGYLVLLSNIYAFAKR-----WQDVIAVRQK 486
+ G G + ++ K WQ VI + ++
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER 308
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 14/199 (7%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
G R + ++L C ++ +L Q+H+Q+V + + L++ YI +L +
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKS 385
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVR 126
+F + +WN II GYA ++++ + +M +S +PN T+ LSAC
Sbjct: 386 KLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSY 445
Query: 127 GGLLREG----EQVHGIVLVKGYCSNVFVETNLINFYAGRGG-VEQARHVFDGMG-QRSV 180
G++ EG E + + VK ++ +++ GR G +A + D M +
Sbjct: 446 AGMVEEGLKIYESMESVFGVKPITAHYACMVDML----GRAGRFNEAMEMIDSMTVEPDA 501
Query: 181 VSWNSILAGYVSCGDFDGA 199
W S+L + D A
Sbjct: 502 AVWGSLLGACRTHSQLDVA 520
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/514 (28%), Positives = 249/514 (48%), Gaps = 47/514 (9%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
T+L++C ++ L QIH+Q+++ G+ + + + L++ Y L+ A + I P
Sbjct: 192 TVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 78 S-------------------------------TTVWNHIIRGYARSHTPWKSVECYRQMV 106
+WN +I GY ++ +++ + +M
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM- 310
Query: 107 STEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVE 166
E + T + +++AC+ G L G+Q+H G ++ V + L++ Y+ G
Sbjct: 311 RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 167 QARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGR 226
+A +F + + NS++ Y SCG D A+RVF+ + ++++SW +M G +Q G
Sbjct: 371 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 227 CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
+ L F +M + + L+LG + + + IV + Q
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV--FARATIVGLDSDQV-- 486
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
++++LI +Y CG + +VF M + V W SMI +A G G EA+ LFK M
Sbjct: 487 -VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM--- 542
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
V G+RP IT +VVL AC + G V+EGR++F SM G P EH+ CMVDLL+RA
Sbjct: 543 --SVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVL 466
G+++EA L+E MP + ++W ++L GC + + K++ EL+ + + Y V
Sbjct: 601 GYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKII-ELEPENSVAY-VQ 658
Query: 467 LSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
LS I+A + W+ VR+ M E V K PG SW
Sbjct: 659 LSAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 183/407 (44%), Gaps = 37/407 (9%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
++S + + +L A +LF+ + N ++ GY + +++ ++++ +
Sbjct: 130 VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSAD 186
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
T + +L AC L+ G+Q+H +L+ G + + ++L+N YA G + A ++ +
Sbjct: 187 AITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLE 246
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
+ + S +++++GY +CG + +R +FD R V+ W +MI+G +AL L
Sbjct: 247 QIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVL 306
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY------VQQRIVARNQ------ 281
F EMR E G L+ G+ +H + + +VA
Sbjct: 307 FNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSK 365
Query: 282 --------------QQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
+ L N++I +Y SCG I DA +VF ++ +S +SW SM F
Sbjct: 366 CGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGF 425
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
++ G E L F M +D + D ++L V+ AC ++ G ++FA
Sbjct: 426 SQNGCTVETLEYFHQM----HKLD-LPTDEVSLSSVISACASISSLELGEQVFARATIV- 479
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G+ ++DL + GF++ + + M +K ++ W +++ G
Sbjct: 480 GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISG 525
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 150/364 (41%), Gaps = 80/364 (21%)
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN-LINFYAGRGGVEQARHVFDGM 175
Y LL +C Q +G++L KG+ S++ + N L+ Y+ G + AR++FD M
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 176 GQRSVVSWNS-------------------------------ILAGYVSCGDFDGARRVFD 204
R+ SWN+ +++G+ G+ ARR+F+
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 205 EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR----------------------- 241
MP ++VV+ +++ G G ++AL LF E+ +
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQ 208
Query: 242 ---------VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
VE GDL++ Y+ ++I ++P +AL
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS----YMLEQI-----REPDDHSLSAL 259
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
I YA+CG + ++ +F + R + W SMI + + EAL LF M ++
Sbjct: 260 ISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE------ 313
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
R D+ TL V+ AC GF++ G+++ + +G+ I ++D+ S+ G EA
Sbjct: 314 TREDSRTLAAVINACIGLGFLETGKQMHCHACK-FGLIDDIVVASTLLDMYSKCGSPMEA 372
Query: 413 HGLI 416
L
Sbjct: 373 CKLF 376
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 239/514 (46%), Gaps = 43/514 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H Q++ + LL Y + A K+F+ + W+ +I + ++
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++V+ + +M PN FT S +L+ C G GEQ+HG+V+ G+ +++V
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
LI+ YA C D A ++F E+ +N VSW
Sbjct: 389 LIDVYA-------------------------------KCEKMDTAVKLFAELSSKNEVSW 417
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
T+I G G +A S+F E R +V + LG +H
Sbjct: 418 NTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG---- 473
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
+ + V ++N+LI MYA CG I A VF +M SW ++I ++ GLG+
Sbjct: 474 -LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGR 532
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
+AL + M +P+ +T + VL C +AG +D+G+ F SM R GI P +E
Sbjct: 533 QALRILDIMKDRDC-----KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY CMV LL R+G LD+A LIE +P +P+ +W A+L N E A +++ +
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL-K 646
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
++ A Y VL+SN+YA AK+W +V ++R+ M EMGVKK PG SWI+ G VH F G
Sbjct: 647 INPKDEATY-VLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGL 705
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
H I +L + ++ Y PD L
Sbjct: 706 SDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLL 739
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 165/428 (38%), Gaps = 47/428 (10%)
Query: 15 IQQHVFT----LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKL 70
+ HVFT L S + + +HS +V G + L++ Y + A +
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 71 FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLL 130
F I VW I+ Y + S++ M PN +T+ L A + G
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
+ VHG +L Y + V L+ Y
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLY------------------------------- 292
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
GD A +VF+EMP +VV W+ MIA Q G C +A+ LF MR A V
Sbjct: 293 TQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLS 352
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
LG +H +V + + ++NALI +YA C + A ++F
Sbjct: 353 SILNGCAIGKCSGLGEQLHG-----LVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
++ ++ VSW ++I+ + G G +A +F+ + + V V T L AC
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV-----TFSSALGACASL 462
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
+D G ++ +T + ++ ++D+ ++ G + A + M + A W A
Sbjct: 463 ASMDLGVQVHGLAIKT-NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNA 520
Query: 431 LLGGCQIH 438
L+ G H
Sbjct: 521 LISGYSTH 528
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H VV G + L+ Y +++ A KLF+ + + + WN +I GY
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
K+ +R+ + + T+S L AC + G QVHG+ + V V
Sbjct: 429 EGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN 488
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR---- 209
+LI+ YA G ++ A+ VF+ M V SWN++++GY + G A R+ D M R
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKP 548
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
N +++ +++GC+ G Q F M R
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 149/400 (37%), Gaps = 47/400 (11%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH ++ G LL+ Y+ + + A LF + + + + +GYA
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA-CQD 129
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
P + Y ++ E N ++ L V +H ++ GY SN FV
Sbjct: 130 P---IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
LIN Y+ G V+ AR VF+G+ + +V W I++ YV G F+
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFE----------------- 229
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+L L MR A G + +H + +
Sbjct: 230 --------------DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILK 275
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
+ R+ L+ +Y G + DA++VF +MP+ V W+ MI F + G
Sbjct: 276 TCYVLDP-----RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EA+ LF M V P+ TL +L C G ++ + + G I
Sbjct: 331 EAVDLFIRMRE-----AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV-GFDLDIY 384
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++D+ ++ +D A L + K N+ W ++ G
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVIVG 423
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 116/307 (37%), Gaps = 50/307 (16%)
Query: 116 TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
Y +L C++ + +H +L KG C ++F L+N Y G FD
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAG--------FD-- 100
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
A +FDEMP RN VS+ T+ G A C+ + L+
Sbjct: 101 ---------------------KDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYS 135
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
+ R E ++ W+H + + + + ALI+
Sbjct: 136 RLHREGHELNPHVFTSFLKLFVSLDKAEICPWLH-----SPIVKLGYDSNAFVGAALINA 190
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y+ CG + A VF + + V W ++ + + G +++L L M + G P
Sbjct: 191 YSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM-----RMAGFMP 245
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRT-WGISPRIEHYGC-MVDLLSRAGFLDEAH 413
+ T L A G D + + + +T + + PR+ G ++ L ++ G + +A
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV---GVGLLQLYTQLGDMSDAF 302
Query: 414 GLIENMP 420
+ MP
Sbjct: 303 KVFNEMP 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L +C ++ ++ +Q+H + ++K + L+ Y ++ A +F+ ++
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV-HG 138
WN +I GY+ +++ M + +PNG T+ +LS C GL+ +G++
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFES 575
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAGYVSCGDFD 197
++ G + T ++ G +++A + +G+ + SV+ W ++L+ ++ + +
Sbjct: 576 MIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEE 635
Query: 198 GARRVFDEM 206
ARR +E+
Sbjct: 636 FARRSAEEI 644
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 253/516 (49%), Gaps = 28/516 (5%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ ++C ++ L +QI+ + + LS + + Y L A ++F +
Sbjct: 388 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 447
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN II + ++ ++++ + M+ + EP+ FT+ +L AC GG L G ++H
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHS 506
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
++ G SN V +LI+ Y+ G +E+A + QR+ VS G +
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEE 555
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
++ ++ VSW ++I+G K + + A LF M +
Sbjct: 556 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 615
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
LG+ IH V + + Q V + + L+ MY+ CG + D+ +F K +R V
Sbjct: 616 LASAGLGKQIHAQV-----IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFV 670
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W +MI +A G G+EA+ LF+ M+ ++ ++P+ +T I +L AC H G +D+G
Sbjct: 671 TWNAMICGYAHHGKGEEAIQLFERMI-----LENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F M R +G+ P++ HY MVD+L ++G + A LI MP + +D +W LLG C IH
Sbjct: 726 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 785
Query: 439 KNS-ELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
+N+ E+A L+ LD ++ Y LLSN+YA A W+ V +R+ M +KK PG
Sbjct: 786 RNNVEVAEEATAALL-RLDPQDSSAY-TLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 843
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
SW+++ +H F+ GD H IYE L I +
Sbjct: 844 CSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSE 879
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
Query: 116 TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
+SF+ C + G L G+Q H +++ G+ FV L+ Y A VFD M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
R VVSWN ++ GY D A F+ MP+R+VVSW +M++G Q G +++ +F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
+M R +E D LG IH IV R V +AL+ M
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHG-----IVVRVGCDTDVVAASALLDM 224
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
YA ++ +VF +P++++VSW+++I + L AL FK M AGV
Sbjct: 225 YAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 279
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 195/466 (41%), Gaps = 72/466 (15%)
Query: 15 IQQHVF-TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKL 70
+ Q ++ ++L+SC + L Q+H+ + + + + T L Y D +Q A L
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 71 FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLL 130
F +N + +N +I GY++ +K++ + +++S+ + + S + AC L
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
EG Q++G+ + +V V I+ Y + +A VFD M +R VSWN+I+A +
Sbjct: 399 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
Q G+ + L LF M R+R+E
Sbjct: 459 -------------------------------EQNGKGYETLFLFVSMLRSRIE-PDEFTF 486
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
G L G IH + + +A N + +LI MY+ CG+I +A ++ +
Sbjct: 487 GSILKACTGGSLGYGMEIHSSIVKSGMASNSS-----VGCSLIDMYSKCGMIEEAEKIHS 541
Query: 311 KMPQRST--------------------VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
+ QR+ VSW S+I + + ++A LF M+
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME----- 596
Query: 351 DGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGC--MVDLLSRAGF 408
G+ PD T VL C + G++I A + + + + Y C +VD+ S+ G
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGD 653
Query: 409 LDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
L ++ + E L+ + W A++ G H E A + +++ E
Sbjct: 654 LHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 698
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 163/384 (42%), Gaps = 45/384 (11%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
K+++ Y S+ + A+ F+ + WN ++ GY ++ KS+E + M E
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
+G T++ +L C G Q+HGIV+ G ++V + L++ YA
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK---------- 227
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
G+R V S RVF +P +N VSW+ +IAGC Q AL
Sbjct: 228 ----GKRFVESL-----------------RVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 266
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
F EM++ +L+LG +H + + A + + A
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI-----VRTA 321
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
+ MYA C + DA +F + S+ +MI ++++ G +AL LF ++S G G
Sbjct: 322 TLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF- 380
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
D I+L V AC + EG +I+ ++ +S + +D+ + L E
Sbjct: 381 ----DEISLSGVFRACALVKGLSEGLQIYGLAIKS-SLSLDVCVANAAIDMYGKCQALAE 435
Query: 412 AHGLIENMPLKPNDAL-WGALLGG 434
A + + M + DA+ W A++
Sbjct: 436 AFRVFDEM--RRRDAVSWNAIIAA 457
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/480 (21%), Positives = 200/480 (41%), Gaps = 79/480 (16%)
Query: 3 IERFVPASGRRSIQ---QHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLS 56
IE FV GR I+ + +L+ C+ +++ +QIH VV G + LL
Sbjct: 165 IEVFVDM-GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLD 223
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
Y + + ++F I ++ W+ II G +++ +++ +++M A +
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
Y+ +L +C LR G Q+H L + ++ V T ++ YA ++ A+ +FD
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALS 232
+ S+N+++ GY A +F + + +S + + CA + L
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
++G + ++ V + NA
Sbjct: 404 IYG----------------------------------------LAIKSSLSLDVCVANAA 423
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
I MY C + +A++VF +M +R VSW ++I A + G G E L LF +M+
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-----SR 478
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGC-MVDLLSRAGFLDE 411
+ PD T +L AC G + G I +S+ ++ G++ GC ++D+ S+ G ++E
Sbjct: 479 IEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASN-SSVGCSLIDMYSKCGMIEE 535
Query: 412 AH-------------GLIENMPLKPNDAL------WGALLGGCQIHKNSELASVVEPKLV 452
A G +E + N L W +++ G + + SE A ++ +++
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 164/550 (29%), Positives = 252/550 (45%), Gaps = 75/550 (13%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
L+S YI + + A +F + + W +++GY + ++ + +M E N
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----PERN 140
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVK----------GYCS---------------- 147
+++ + + G + + +++ ++ VK G C
Sbjct: 141 EVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRE 200
Query: 148 -NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY---------------- 190
NV T +I Y V+ AR +F+ M +++ VSW S+L GY
Sbjct: 201 RNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
Query: 191 -----VSC----------GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
++C G+ ARRVFD M R+ +W MI +KG +AL LF
Sbjct: 261 PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFA 320
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
+M++ V L+ GR +H ++ R Q V + + L+ M
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL-----VRCQFDDDVYVASVLMTM 375
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y CG + A VF + + + W S+I +A GLG+EAL +F M S G P
Sbjct: 376 YVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT-----MP 430
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
+ +TLI +L AC +AG ++EG IF SM + ++P +EHY C VD+L RAG +D+A L
Sbjct: 431 NKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL 490
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK 475
IE+M +KP+ +WGALLG C+ H +LA V KL E + D A Y VLLS+I A
Sbjct: 491 IESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLF-ENEPDNAGTY-VLLSSINASRS 548
Query: 476 RWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDM-THKHSYFIYEILSEIIKQS 534
+W DV VR+ M V K PG SWI++ VH F G + H I +L +
Sbjct: 549 KWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLL 608
Query: 535 HVDSYEPDIT 544
Y PD +
Sbjct: 609 REAGYSPDCS 618
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 33/342 (9%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
++ A K F ++ + WN I+ GY + P ++ RQ+ +E N +++ L+S
Sbjct: 32 KINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEA----RQLFDEMSERNVVSWNGLVS 87
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
++ ++ E V ++ + NV T ++ Y G V +A +F M +R+ VS
Sbjct: 88 GYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
W + G + G D AR+++D MP+++VV+ T MI G ++GR +A +F EMR V
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGR---------WIHWYVQQRIVARNQQ----------Q 283
KL W + + R + +
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263
Query: 284 PSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
P + NA+I + G I A +VF M R +W MI A+ ++G EAL LF M
Sbjct: 264 PVIAC-NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
GVRP +LI +L C + GR++ A + R
Sbjct: 323 QK-----QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 140/338 (41%), Gaps = 62/338 (18%)
Query: 113 NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVF 172
G SF +S R G + E + + K S ++++ Y G ++AR +F
Sbjct: 16 TGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGS----WNSIVSGYFSNGLPKEARQLF 71
Query: 173 DGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALS 232
D M +R+VVSWN +++GY+ AR VF+ MP RNVVSWT M+ G Q+G +A S
Sbjct: 72 DEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAES 131
Query: 233 LF---------------------GEMRRARVEXXXXXXXXXXXXXXXXGDL-KLGRWIHW 270
LF G + +AR G L + GR
Sbjct: 132 LFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGR---- 187
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
+ R++ ++ +V +I Y + A ++F MP+++ VSWTSM++ +
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS 247
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF-----VDEGRRIFASM-- 383
G ++A F+ M ++P V+ C GF + + RR+F M
Sbjct: 248 GRIEDAEEFFEVM--------PMKP------VIACNAMIVGFGEVGEISKARRVFDLMED 293
Query: 384 --NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
N TW M+ R GF EA L M
Sbjct: 294 RDNATW---------RGMIKAYERKGFELEALDLFAQM 322
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 123/297 (41%), Gaps = 60/297 (20%)
Query: 139 IVLVKGYCSNVFVETNL-INFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
++L + Y ++ V + I+ + G + +AR FD + +++ SWNSI++GY S G
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
AR++FDEM RNVVSW +++G + +A ++F M V
Sbjct: 66 EARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV--------------- 110
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
+ W A++ Y G++G+A +F +MP+R+
Sbjct: 111 ----------VSW-------------------TAMVKGYMQEGMVGEAESLFWRMPERNE 141
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSWT M G +A L+ M D + ++ C G VDE R
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMMPV---------KDVVASTNMIGGLCREGRVDEAR 192
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
IF M + + M+ + +D A L E MP K + W ++L G
Sbjct: 193 LIFDEMRER-----NVVTWTTMITGYRQNNRVDVARKLFEVMPEK-TEVSWTSMLLG 243
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
G R + ++L C + +L Q+H+ +V + + L++ Y+ +L A
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG 127
+F + +WN II GYA ++++ + +M S+ PN T +L+AC
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYA 445
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVE--TNLINFYAGRGGVEQARHVFDGMG-QRSVVSWN 184
G L EG ++ + K +C VE + ++ G V++A + + M + W
Sbjct: 446 GKLEEGLEIFESMESK-FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWG 504
Query: 185 SILAGYVSCGDFD----GARRVFDEMP 207
++L + D A+++F+ P
Sbjct: 505 ALLGACKTHSRLDLAEVAAKKLFENEP 531
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 162/572 (28%), Positives = 269/572 (47%), Gaps = 49/572 (8%)
Query: 6 FVPASGRRSIQQ-HVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQL 64
+ PA + S + H +L+ +C + +L +H+Q++ G+ + + +L+S
Sbjct: 18 YFPADRQASPDESHFISLIHACKDTASLRHVHAQILRRGV-LSSRVAAQLVSCSSLLKSP 76
Query: 65 QHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC 124
++ +F + + V N +IRG + SV + M+ +P+ T+ F+L +
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 125 VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD----------- 173
+ G G +H L + FV +L++ YA G ++ A VF+
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 174 ------------------------GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR 209
M +R+ SW++++ GYV G+ + A+++F+ MP +
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK 256
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
NVVSWTT+I G +Q G + A+S + EM ++ G L G IH
Sbjct: 257 NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
Y+ + ++ + AL+ MYA CG + A VF+ M + +SWT+MI +A
Sbjct: 317 GYILDNGIKLDRA-----IGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAV 371
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
G +A+ F+ M+ G +PD + + VL AC ++ VD G F SM + I
Sbjct: 372 HGRFHQAIQCFRQMMYSGE-----KPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAI 426
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEP 449
P ++HY +VDLL RAG L+EAH L+ENMP+ P+ W AL C+ HK A V
Sbjct: 427 EPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQ 486
Query: 450 KLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHD 509
L+ ELD + Y + L +A QDV R + + ++ G S+I+++G ++
Sbjct: 487 NLL-ELDPELCGSY-IFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNK 544
Query: 510 FVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
F AGD +HK + I L EII + Y P
Sbjct: 545 FSAGDYSHKLTQEIGLKLDEIISLAIQKGYNP 576
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/539 (27%), Positives = 261/539 (48%), Gaps = 43/539 (7%)
Query: 5 RFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQL 64
R+ R++ + L + H +++ L ++ L++ Y +
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 65 QHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC 124
+ A ++F + S WN +I Y R+ ++++ + +M + + + FT S +LSAC
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Query: 125 VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWN 184
E +++H + + N++V T L++ YA
Sbjct: 173 GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYA------------------------ 208
Query: 185 SILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEX 244
CG A +VF+ M ++ V+W++M+AG Q ++AL L+ +R +E
Sbjct: 209 -------KCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
L G+ +H ++ ++ +V + ++ + MYA CG + +
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMH-----AVICKSGFGSNVFVASSAVDMYAKCGSLRE 316
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
+Y +F+++ +++ W ++I FAK KE + LF+ M DG + P+ +T +L
Sbjct: 317 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG-----MHPNEVTFSSLL 371
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPN 424
C H G V+EGRR F M T+G+SP + HY CMVD+L RAG L EA+ LI+++P P
Sbjct: 372 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPT 431
Query: 425 DALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVR 484
++WG+LL C+++KN ELA V KL EL+ + A + VLLSNIYA K+W+++ R
Sbjct: 432 ASIWGSLLASCRVYKNLELAEVAAEKLF-ELEPENAGNH-VLLSNIYAANKQWEEIAKSR 489
Query: 485 QKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
+ + + VKK G+SWI I VH F G+ H I L ++ + Y+P +
Sbjct: 490 KLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSV 548
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 168/501 (33%), Positives = 262/501 (52%), Gaps = 50/501 (9%)
Query: 17 QHVFTLLQSC-NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
QH +L+Q +N++ + Q+HS +G ++ Q Q++ KLF
Sbjct: 37 QHFQSLMQKYESNLKIIHQLHSHFTTSG--------------FLLLHQKQNSGKLF---- 78
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVS-------TEAEP--NGFTYSFLLSACV- 125
++N ++R Y+ TP + Y Q+ ++ P + FTY FLL A
Sbjct: 79 -----LFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSN 133
Query: 126 -RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWN 184
R L G +HG+ L G+ S+V+V+T L+ Y G + A VFD M +R+ V+WN
Sbjct: 134 PRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWN 193
Query: 185 SILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR-VE 243
++ G + GDF+ A ++MP R VVSWTT+I G A+ + K+A+ LF M ++
Sbjct: 194 VMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIK 253
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
GDLK+ +H YV +R +R+ N+LI YA CG I
Sbjct: 254 PNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFV----PCDIRVTNSLIDAYAKCGCIQ 309
Query: 304 DAYQVFTKMP--QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
A++ F ++P +++ VSWT+MI AFA G+GKEA+ +FK M G++P+ +T+I
Sbjct: 310 SAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER-----LGLKPNRVTMI 364
Query: 362 VVLCACCHAGFVDEG-RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
VL AC H G +E F +M + I+P ++HYGC+VD+L R G L+EA + +P
Sbjct: 365 SVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIP 424
Query: 421 LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDV 480
++ +W LLG C ++ ++ELA V KL+ EL+ Y VL+SNI+ R+ D
Sbjct: 425 IEEKAVVWRMLLGACSVYDDAELAERVTRKLM-ELERSHGGDY-VLMSNIFCGTGRFLDA 482
Query: 481 IAVRQKMIEMGVKKPPGQSWI 501
R++M GV K PG S +
Sbjct: 483 QRFRKQMDVRGVAKLPGHSQV 503
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 155/533 (29%), Positives = 244/533 (45%), Gaps = 46/533 (8%)
Query: 2 LIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFY 58
R V AS + + TL+ +C + N +H V+ G S +++ LL+ Y
Sbjct: 149 FFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCY 208
Query: 59 IASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYS 118
S + A LF I W+ +I Y ++ +++ + M+ EPN T
Sbjct: 209 AKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVL 268
Query: 119 FLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
+L AC L +G + H + + KG + V V T L++ Y
Sbjct: 269 CVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY------------------- 309
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
+ C + A VF +P ++VVSW +I+G G +++ F M
Sbjct: 310 ------------MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML 357
Query: 239 -RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
G L+ + H YV + N P + +L+ +Y+
Sbjct: 358 LENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSN---PFI--GASLVELYS 412
Query: 298 SCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
CG +G+A +VF + + TV WTS+I + G G +AL F MV V+P+
Sbjct: 413 RCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE----VKPNE 468
Query: 358 ITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
+T + +L AC HAG + EG RIF M + ++P +EHY +VDLL R G LD A + +
Sbjct: 469 VTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 528
Query: 418 NMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRW 477
MP P + G LLG C+IH+N E+A V KL EL+++ AGY +L+SN+Y W
Sbjct: 529 RMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLF-ELESN-HAGYYMLMSNVYGVKGEW 586
Query: 478 QDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
++V +R + + G+KK +S I+I VH FVA D H +Y +L E+
Sbjct: 587 ENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 185/388 (47%), Gaps = 43/388 (11%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV-STEA 110
+ L+ YI ++ A ++F ++ P W+ ++ G+ ++ +P+++VE +R+MV +++
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 111 EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARH 170
P+ T L+SAC + R G VHG V+ +G+ +++ + +L+N YA ++A +
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 219
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA 230
+F + ++ V+SW++++A YV Q G +A
Sbjct: 220 LFKMIAEKDVISWSTVIACYV-------------------------------QNGAAAEA 248
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNN 290
L +F +M E DL+ GR H + R + V+++
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH-----ELAIRKGLETEVKVST 303
Query: 291 ALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
AL+ MY C +AY VF+++P++ VSW ++I F G+ ++ F M+ +
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE---- 359
Query: 351 DGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLD 410
+ RPDAI ++ VL +C GF+++ + F S +G +V+L SR G L
Sbjct: 360 NNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLG 418
Query: 411 EAHGLIENMPLKPNDALWGALLGGCQIH 438
A + + LK + +W +L+ G IH
Sbjct: 419 NASKVFNGIALK-DTVVWTSLITGYGIH 445
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 167/372 (44%), Gaps = 49/372 (13%)
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
A ++F + S WN +++ +R + + + M E +P+ FT L AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC-- 70
Query: 127 GGLLRE---GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
G LRE GE +HG V +V + ++L Y G
Sbjct: 71 -GELREVNYGEMIHGFVK-----KDVTLGSDL---YVG---------------------- 99
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR-V 242
+S++ Y+ CG A R+FDE+ ++V+W++M++G + G QA+ F M A V
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
+ +LGR +H +V +R + + + L N+L++ YA
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSND-----LSLVNSLLNCYAKSRAF 214
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
+A +F + ++ +SW+++I + + G EAL +F M+ DG P+ T++
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT-----EPNVATVLC 269
Query: 363 VLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
VL AC A +++GR+ R G+ ++ +VD+ + +EA+ + +P K
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 328
Query: 423 PNDALWGALLGG 434
+ W AL+ G
Sbjct: 329 -DVVSWVALISG 339
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 258/527 (48%), Gaps = 56/527 (10%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q H+ ++NG+ + T LL+FY +++A +F + WN II GY +
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++ + M + + + T + L+SA R L+ G++V + + S++ + +
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAS 414
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG------------------- 194
+++ YA G + A+ VFD ++ ++ WN++LA Y G
Sbjct: 415 TVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP 474
Query: 195 ----------------DFDGARRVFDEMP----IRNVVSWTTMIAGCAQKGRCKQALSLF 234
D A+ +F +M I N++SWTTM+ G Q G ++A+
Sbjct: 475 NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFL 534
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPS-VRLNNALI 293
+M+ + + L +GR IH Y+ RN Q S V + +L+
Sbjct: 535 RKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYI-----IRNLQHSSLVSIETSLV 589
Query: 294 HMYASCGVIGDAYQVF-TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
MYA CG I A +VF +K+ +S +MI A+A G KEA+ L++++ GV G
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLS-NAMISAYALYGNLKEAIALYRSL----EGV-G 643
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
++PD IT+ VL AC HAG +++ IF + + P +EHYG MVDLL+ AG ++A
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKA 703
Query: 413 HGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYA 472
LIE MP KP+ + +L+ C + +EL + KL+ E + + + Y V +SN YA
Sbjct: 704 LRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLL-ESEPENSGNY-VTISNAYA 761
Query: 473 FAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGV--VHDFVAGDMTH 517
W +V+ +R+ M G+KK PG SWIQI G VH FVA D TH
Sbjct: 762 VEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTH 808
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 181/404 (44%), Gaps = 45/404 (11%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H VV +GL + + L Y L A K+F I + + WN ++ GY ++
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGK 254
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+++ + M EP T S LSA G + EG+Q H I +V G + + T+
Sbjct: 255 NEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTS 314
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L+NFY G +E A VFD M ++ VV+WN I++GYV
Sbjct: 315 LLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYV----------------------- 351
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
Q+G + A+ + MR +++ +LKLG+ + Y
Sbjct: 352 --------QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCY--- 400
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
R+ + + L + ++ MYA CG I DA +VF ++ + W +++ A+A+ GL
Sbjct: 401 --CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EAL LF G ++GV P+ IT +++ + G VDE + +F M + GI P +
Sbjct: 459 EALRLFY-----GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLI 512
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALLGGC 435
+ M++ + + G +EA + M L+PN L C
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 179/418 (42%), Gaps = 48/418 (11%)
Query: 22 LLQSC---NNIQNLIQIHSQVVLNG--LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
+LQ C ++ QIH++++ NG ++ I TKL+ FY D L+ A LFS +
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV 135
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
+ W II R ++ + +M+ E P+ F + AC R G V
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV 195
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG V+ G VFV ++L + Y G ++ A VFD + R+ V+WN+++ GYV G
Sbjct: 196 HGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG-- 253
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
+ ++A+ LF +MR+ VE
Sbjct: 254 -----------------------------KNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
G ++ G+ H I N + L +L++ Y G+I A VF +M ++
Sbjct: 285 ANMGGVEEGKQSH-----AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD 339
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
V+W +I + +QGL ++A+ + + M ++ ++ D +TL ++ A + G
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLM-----RLEKLKYDCVTLATLMSAAARTENLKLG 394
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ + R I ++D+ ++ G + +A + ++ ++ + LW LL
Sbjct: 395 KEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 138/335 (41%), Gaps = 45/335 (13%)
Query: 49 NIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVST 108
N I + F ++S H +PS+T + H + ++ +++ +M
Sbjct: 7 NTIPNKVPFSVSSKPSSKHHD--EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFR 64
Query: 109 EAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKG--YCSNVFVETNLINFYAGRGGVE 166
Y +L CV L G+Q+H +L G Y N ++ET L+ FYA
Sbjct: 65 NLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYA------ 118
Query: 167 QARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGR 226
C + A +F ++ +RNV SW +I + G
Sbjct: 119 -------------------------KCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGL 153
Query: 227 CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
C+ AL F EM + + GR +H Y V ++ + V
Sbjct: 154 CEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGY-----VVKSGLEDCV 208
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
+ ++L MY CGV+ DA +VF ++P R+ V+W ++++ + + G +EA+ LF M
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK- 267
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
GV P +T+ L A + G V+EG++ A
Sbjct: 268 ----QGVEPTRVTVSTCLSASANMGGVEEGKQSHA 298
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 15/233 (6%)
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
S+ ++ + G K+ALSL EM + DL G+ IH +
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 273 QQR--IVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
+ ARN+ + L+ YA C + A +F+K+ R+ SW ++I +
Sbjct: 97 LKNGDFYARNEY-----IETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
GL + AL F M+ + + PD + V AC + GR + + ++ G+
Sbjct: 152 GLCEGALMGFVEMLENE-----IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS-GLE 205
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL-GGCQIHKNSE 442
+ + D+ + G LD+A + + +P + N W AL+ G Q KN E
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDR-NAVAWNALMVGYVQNGKNEE 257
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 145/457 (31%), Positives = 234/457 (51%), Gaps = 23/457 (5%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDN------PSTTVWNHIIRGYARSHTPWKSVECYRQMVS 107
L F +S+Q++ H + T + + V+N +IR Y + S+ + M++
Sbjct: 20 LQRFLYSSNQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLA 79
Query: 108 TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQ 167
+ +PN T+ L+ A + G +HG L +G+ + FV+T+ + FY G +E
Sbjct: 80 SHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLES 139
Query: 168 ARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRC 227
+R +FD + VV+ NS+L G+ D A F MP+ +VVSWTT+I G ++KG
Sbjct: 140 SRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLH 199
Query: 228 KQALSLFGEM---RRARV--EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
+AL +FGEM RA + G ++LG+ IH YV + +
Sbjct: 200 AKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTT 259
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
+ L+ MY G + A +F ++ + +W ++I A A G K+AL +F+
Sbjct: 260 LGTALLD-----MYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEM 314
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
M S V P+ ITL+ +L AC + VD G ++F+S+ + I P EHYGC+VDL
Sbjct: 315 MKS-----SYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDL 369
Query: 403 LSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAG 462
+ RAG L +A I+++P +P+ ++ GALLG C+IH+N+EL + V +L+ L
Sbjct: 370 IGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIG-LQPQHCGQ 428
Query: 463 YLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQS 499
Y V LS A W + +R+ MIE G++K P S
Sbjct: 429 Y-VALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 42/246 (17%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV----------- 81
+ +H Q + G + T + FY L+ + K+F I NP
Sbjct: 106 VALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRN 165
Query: 82 --------------------WNHIIRGYARSHTPWKSVECYRQMVSTE---AEPNGFTYS 118
W +I G+++ K++ + +M+ E PN T+
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 119 FLLSACV---RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
+LS+C +GG +R G+Q+HG V+ K + T L++ Y G +E A +FD +
Sbjct: 226 SVLSSCANFDQGG-IRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI 284
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQAL 231
+ V +WN+I++ S G A +F+ M N ++ ++ CA+ +
Sbjct: 285 RDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGI 344
Query: 232 SLFGEM 237
LF +
Sbjct: 345 QLFSSI 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 21 TLLQSCNN-----IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
++L SC N I+ QIH V+ + T + T LL Y + L+ A +F I
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ WN II A + P +++E + M S+ PNG T +L+AC R L+ G Q
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQ 345
Query: 136 V 136
+
Sbjct: 346 L 346
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 240/477 (50%), Gaps = 46/477 (9%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
L+ Y +L + + + + WN +I YA +++ +RQMV+ +P+
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPD 404
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
FT + +SAC GL+ G+Q+HG V ++ S+ FV+ +LI+ Y+ G V+ A VF+
Sbjct: 405 AFTLASSISACENAGLVPLGKQIHGHV-IRTDVSDEFVQNSLIDMYSKSGSVDSASTVFN 463
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
+ RSVV+WNS+L G+ +Q G +A+SL
Sbjct: 464 QIKHRSVVTWNSMLCGF-------------------------------SQNGNSVEAISL 492
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
F M + +E G L+ G+W+H +++ + + + ALI
Sbjct: 493 FDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH----HKLIISGLKD--LFTDTALI 546
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
MYA CG + A VF M RS VSW+SMI A+ G A+ F MV G
Sbjct: 547 DMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT----- 601
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
+P+ + + VL AC H+G V+EG+ F M +++G+SP EH+ C +DLLSR+G L EA+
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAY 660
Query: 414 GLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAF 473
I+ MP + ++WG+L+ GC+IH+ ++ ++ L +++ TD GY LLSNIYA
Sbjct: 661 RTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDL-SDIVTDD-TGYYTLLSNIYAE 718
Query: 474 AKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
W++ +R M +KK PG S I+I+ V F AG+ + IY L +
Sbjct: 719 EGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 197/432 (45%), Gaps = 48/432 (11%)
Query: 15 IQQHVF-TLLQSCNNIQNLI----QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK 69
I + VF ++L++C + + ++H +++ G+ I T LL Y + L A K
Sbjct: 98 ISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEK 157
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
+F + W+ ++ + K++ ++ MV EP+ T ++ C G
Sbjct: 158 VFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC 217
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
LR VHG + K + + + +L+ Y+ G + + +F+ + +++ VSW ++++
Sbjct: 218 LRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISS 277
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y + G+F ++AL F EM ++ +E
Sbjct: 278 Y-NRGEFS------------------------------EKALRSFSEMIKSGIEPNLVTL 306
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G ++ G+ +H + +R + N + S+ AL+ +YA CG + D V
Sbjct: 307 YSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL----ALVELYAECGKLSDCETVL 362
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+ R+ V+W S+I +A +G+ +ALGLF+ MV+ ++PDA TL + AC +
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT-----QRIKPDAFTLASSISACEN 417
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
AG V G++I + RT +++ ++D+ S++G +D A + + + + W
Sbjct: 418 AGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQIKHR-SVVTWN 474
Query: 430 ALLGGCQIHKNS 441
++L G + NS
Sbjct: 475 SMLCGFSQNGNS 486
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 187/414 (45%), Gaps = 46/414 (11%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNI-ITKLLSFYIASDQLQHAHKLFSTIDNPSTT 80
L +SC++++ + Q+H+ +++ G ++ + +TKL+ Y + +F P +
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG-GLLREGEQVHGI 139
++ +I+ H +++ Y ++VS + + F + +L AC L G +VHG
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
++ G + +ET+L+ Y G + A VFDGM R +V+W
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAW---------------- 170
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
+T+++ C + G +AL +F M VE
Sbjct: 171 ---------------STLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAEL 215
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
G L++ R +H + +++ ++ L N+L+ MY+ CG + + ++F K+ +++ VS
Sbjct: 216 GCLRIARSVHGQITRKMFDLDET-----LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
WT+MI ++ + ++AL F M+ G+ P+ +TL VL +C G + EG+ +
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIK-----SGIEPNLVTLYSVLSSCGLIGLIREGKSV 325
Query: 380 FASMNRTWGISPRIEHYG-CMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
R + P E +V+L + G L + ++ + + N W +L+
Sbjct: 326 HGFAVRR-ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR-NIVAWNSLI 377
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 145/344 (42%), Gaps = 41/344 (11%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+H Q+ + LL+ Y L + ++F I + W +I Y R
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
K++ + +M+ + EPN T +LS+C GL+REG+ VHG + + N
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPN----- 337
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
++ + +++ Y CG V + RN+V+
Sbjct: 338 ------------------YESLSL-------ALVELYAECGKLSDCETVLRVVSDRNIVA 372
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W ++I+ A +G QAL LF +M R++ G + LG+ IH +V
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ V+ Q N+LI MY+ G + A VF ++ RS V+W SM+ F++ G
Sbjct: 433 RTDVSDEFVQ------NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNS 486
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
EA+ LF M + + +T + V+ AC G +++G+
Sbjct: 487 VEAISLFDYMYH-----SYLEMNEVTFLAVIQACSSIGSLEKGK 525
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 135/317 (42%), Gaps = 45/317 (14%)
Query: 15 IQQHVFTLLQSCNNIQN--LI----QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH 68
I+ FTL S + +N L+ QIH V+ +S + + L+ Y S + A
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSAS 459
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
+F+ I + S WN ++ G++++ +++ + M + E N T+ ++ AC G
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
L +G+ VH +++ G ++F +T LI+ YA
Sbjct: 520 SLEKGKWVHHKLIISGL-KDLFTDTALIDMYA---------------------------- 550
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
CGD + A VF M R++VSW++MI GR A+S F +M + +
Sbjct: 551 ---KCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVV 607
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G ++ G++ ++ V+ N + + I + + G + +AY+
Sbjct: 608 FMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFA-----CFIDLLSRSGDLKEAYRT 662
Query: 309 FTKMPQRSTVS-WTSMI 324
+MP + S W S++
Sbjct: 663 IKEMPFLADASVWGSLV 679
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 148/364 (40%), Gaps = 59/364 (16%)
Query: 130 LREGEQVHGIVLVKGYCS-NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
LR Q+H +LV G + T LI YA G + +R VF+ + ++
Sbjct: 14 LRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIK 73
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
V C D A ++ + VS TT I+ +F + RA
Sbjct: 74 CNVWCHLLDAAIDLYHRL-----VSETTQISKF-----------VFPSVLRA-------- 109
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
L +G +H RI+ +V + +L+ MY G + DA +V
Sbjct: 110 ------CAGSREHLSVGGKVH----GRIIKGGVDDDAV-IETSLLCMYGQTGNLSDAEKV 158
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F MP R V+W++++ + + G +AL +FK MV DGV PDA+T+I V+ C
Sbjct: 159 FDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVD-----DGVEPDAVTMISVVEGCA 213
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGC--MVDLLSRAGFLDEAHGLIENMPLKPNDA 426
G + R + + R ++ C ++ + S+ G L + + E + K N
Sbjct: 214 ELGCLRIARSVHGQITRKMF---DLDETLCNSLLTMYSKCGDLLSSERIFEKIA-KKNAV 269
Query: 427 LWGALLGGCQIHKNSELA---------SVVEPKLVAELDTDGAAGYLVLL---SNIYAFA 474
W A++ + SE A S +EP LV + G + L+ +++ FA
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFA 329
Query: 475 KRWQ 478
R +
Sbjct: 330 VRRE 333
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 230/479 (48%), Gaps = 48/479 (10%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
++T +L Y ++ +A ++F+ + + WN +I YAR+ + C+++M
Sbjct: 269 VMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQN 328
Query: 110 A-EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQA 168
+P+ T LL A + EG +HG + +G+ ++ +ET LI+ Y
Sbjct: 329 GLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYG-------- 376
Query: 169 RHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK 228
CG A +FD M +NV+SW ++IA Q G+
Sbjct: 377 -----------------------ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNY 413
Query: 229 QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRL 288
AL LF E+ + + L GR IH Y+ +++ + +
Sbjct: 414 SALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI-----VKSRYWSNTII 468
Query: 289 NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
N+L+HMYA CG + DA + F + + VSW S+IMA+A G G+ ++ LF M++
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASR- 527
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
V P+ T +L AC +G VDEG F SM R +GI P IEHYGCM+DL+ R G
Sbjct: 528 ----VNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGN 583
Query: 409 LDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
A +E MP P +WG+LL + HK+ +A ++ +++ D Y++LL
Sbjct: 584 FSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIF-KMEHDNTGCYVLLL- 641
Query: 469 NIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
N+YA A RW+DV ++ M G+ + +S ++ G H F GD +H + IYE+L
Sbjct: 642 NMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 218/484 (45%), Gaps = 55/484 (11%)
Query: 51 ITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA 110
+T+ L + S ++ A +LF ++ +WN +I+G+ ++V+ Y +MV
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 111 EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARH 170
+ + FTY F++ + L EG+++H +V+ G+ S+V+V +LI+ Y G
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLG------- 179
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA 230
+W+ A +VF+EMP R++VSW +MI+G G +
Sbjct: 180 ----------CAWD--------------AEKVFEEMPERDIVSWNSMISGYLALGDGFSS 215
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY-VQQRIVARNQQQPSVRLN 289
L LF EM + + K+G+ IH + V+ RI + V +
Sbjct: 216 LMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI-----ETGDVMVM 270
Query: 290 NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
+++ MY+ G + A ++F M QR+ V+W MI +A+ G +A F+ M
Sbjct: 271 TSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ--- 327
Query: 350 VDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
+G++PD IT I +L A + EGR I R G P + ++D+ G L
Sbjct: 328 -NGLQPDVITSINLL----PASAILEGRTIHGYAMRR-GFLPHMVLETALIDMYGECGQL 381
Query: 410 DEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAEL-DTDGAAGYLVLLS 468
A + + M K N W +++ +N + S +E L EL D+ + S
Sbjct: 382 KSAEVIFDRMAEK-NVISWNSIIAA--YVQNGKNYSALE--LFQELWDSSLVPDSTTIAS 436
Query: 469 NIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDF-VAGDMTHKHSYFIYEIL 527
+ A+A+ ++ +++ VK + I +N +VH + + GD+ F + +L
Sbjct: 437 ILPAYAESLS--LSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 528 SEII 531
+++
Sbjct: 495 KDVV 498
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 175/413 (42%), Gaps = 61/413 (14%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH+ V+ G + L+S Y+ A K+F + WN +I GY
Sbjct: 151 KIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALG 210
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH-GIVLVKGYCSNVFVE 152
+ S+ +++M+ +P+ F+ L AC + G+++H V + +V V
Sbjct: 211 DGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVM 270
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN-- 210
T++++ Y+ G V A +F+GM QR++V+WN ++ Y G A F +M +N
Sbjct: 271 TSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGL 330
Query: 211 ---VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
V++ ++ A + GR
Sbjct: 331 QPDVITSINLLPASA---------------------------------------ILEGRT 351
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
IH Y +R P + L ALI MY CG + A +F +M +++ +SW S+I A+
Sbjct: 352 IHGYAMRRGFL-----PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAY 406
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASM--NR 385
+ G AL LF+ + + PD+ T+ +L A + + EGR I A + +R
Sbjct: 407 VQNGKNYSALELFQELWD-----SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
W + + +V + + G L++A ++ LK + W +++ +H
Sbjct: 462 YWSNTIIL---NSLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVH 510
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH + G + T L+ Y QL+ A +F + + WN II Y ++
Sbjct: 352 IHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGK 411
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+ ++E ++++ + P+ T + +L A L EG ++H ++ Y SN + +
Sbjct: 412 NYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS 471
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----N 210
L++ YA G +E AR F+ + + VVSWNSI+ Y G + +F EM N
Sbjct: 472 LVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPN 531
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
++ +++A C+ G + F M+R
Sbjct: 532 KSTFASLLAACSISGMVDEGWEYFESMKR 560
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH+ +V + T I+ L+ Y L+ A K F+ I WN II YA
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
SV + +M+++ PN T++ LL+AC G++ EG + + E+
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE--------------YFES 557
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
+ Y G+E + D +G+ G+F A+R +EMP
Sbjct: 558 -MKREYGIDPGIEHYGCMLDLIGR---------------TGNFSAAKRFLEEMPF 596
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 263/531 (49%), Gaps = 56/531 (10%)
Query: 36 HSQVVLNGLSQKTNIIT--KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++ + + + + N++T ++S Y+ S QL A LF + + WN +I GYA+S
Sbjct: 95 EARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSG 154
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
K++E + +M E N +++ ++ A V+ G + E + + + +V T
Sbjct: 155 RIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWT 206
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVF---------- 203
+++ A G V++AR +FD M +R+++SWN+++ GY D A ++F
Sbjct: 207 AMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS 266
Query: 204 ---------------------DEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRAR 241
D MP +NV+SWTTMI G + ++AL++F +M R
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGS 326
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
V+ L G+ IH ++++++ Q + + +AL++MY+ G
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIH-----QLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 302 IGDAYQVFTK--MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
+ A ++F + QR +SW SMI +A G GKEA+ ++ M G +P A+T
Sbjct: 382 LIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHG-----FKPSAVT 436
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+ +L AC HAG V++G F + R + R EHY C+VDL RAG L + I
Sbjct: 437 YLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCD 496
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
+ + + +GA+L C +H +A V K V E +D A Y VL+SNIYA + ++
Sbjct: 497 DARLSRSFYGAILSACNVHNEVSIAKEVVKK-VLETGSDDAGTY-VLMSNIYAANGKREE 554
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
+R KM E G+KK PG SW+++ H FV GD +H + ILS++
Sbjct: 555 AAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 167/362 (46%), Gaps = 37/362 (10%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
++ A KLF + W H+I GY + ++ E + ++ ++ N T++ ++S
Sbjct: 61 KIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMVS 117
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
+R L E + + + NV +I+ YA G +++A +FD M +R++VS
Sbjct: 118 GYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS 173
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
WNS++ V G D A +F+ MP R+VVSWT M+ G A+ G+ +A LF M +
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI 233
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLN------NALIHMY 296
+ I Y Q + Q V N +I +
Sbjct: 234 -------------------ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGF 274
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
+ A +F +MP+++ +SWT+MI + + +EAL +F M+ DG+ V+P+
Sbjct: 275 IRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGS----VKPN 330
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
T + +L AC + EG++I ++++ I ++++ S++G L A +
Sbjct: 331 VGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI-VTSALLNMYSKSGELIAARKMF 389
Query: 417 EN 418
+N
Sbjct: 390 DN 391
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 132/339 (38%), Gaps = 92/339 (27%)
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFD------------------ 204
G + +AR +FDG+ +R VV+W ++ GY+ GD AR +FD
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 205 --------------EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
EMP RNVVSW TMI G AQ GR +AL LF EM +
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI-------- 171
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
+ W N+++ G I +A +F
Sbjct: 172 -----------------VSW-------------------NSMVKALVQRGRIDEAMNLFE 195
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+MP+R VSWT+M+ AK G EA LF M + I+ ++
Sbjct: 196 RMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPE---------RNIISWNAMITGYAQN 246
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
+DE ++F M + M+ R +++A GL + MP K N W
Sbjct: 247 NRIDEADQLFQVMPER-----DFASWNTMITGFIRNREMNKACGLFDRMPEK-NVISWTT 300
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAG-YLVLLS 468
++ G +K +E A V K++ + G Y+ +LS
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITK-LLSFYIASDQLQHAHKLFST--I 74
++L +C+++ L+ QIH Q++ + QK I+T LL+ Y S +L A K+F +
Sbjct: 336 SILSACSDLAGLVEGQQIH-QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV 394
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
WN +I YA +++E Y QM +P+ TY LL AC GL+ +G
Sbjct: 395 CQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 244/508 (48%), Gaps = 44/508 (8%)
Query: 37 SQVVLNGLSQKTNIITK--LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
S V + G +K N ++ L++ Y+ + L +A K+F + + T WN +I G +
Sbjct: 12 SAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 71
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+ + +R+M P+ +T + S + G+Q+HG + G ++ V ++
Sbjct: 72 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 131
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L + Y G ++ DG V MP+RN+V+W
Sbjct: 132 LAHMYMRNGKLQ------------------------------DG-EIVIRSMPVRNLVAW 160
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
T+I G AQ G + L L+ M+ + G+ IH
Sbjct: 161 NTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEA-- 218
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
+ V + ++LI MY+ CG +GDA + F++ V W+SMI A+ G G
Sbjct: 219 ---IKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGD 275
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EA+ LF TM A + + + + +L AC H+G D+G +F M +G P ++
Sbjct: 276 EAIELFNTM----AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLK 331
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY C+VDLL RAG LD+A +I +MP+K + +W LL C IHKN+E+A V K + +
Sbjct: 332 HYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV-FKEILQ 390
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
+D + +A Y VLL+N++A AKRW+DV VR+ M + VKK G SW + G VH F GD
Sbjct: 391 IDPNDSACY-VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGD 449
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPD 542
+ S IY L E+ + + Y+PD
Sbjct: 450 RSQSKSKEIYSYLKELTLEMKLKGYKPD 477
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 12/283 (4%)
Query: 156 INFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWT 215
++ Y+ G A V+ M +++ +S N ++ GYV GD AR+VFDEMP R + +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 216 TMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR 275
MIAG Q ++ LSLF EM + +G+ IH Y
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY---- 116
Query: 276 IVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKE 335
+ + + +N++L HMY G + D V MP R+ V+W ++IM A+ G +
Sbjct: 117 -TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET 175
Query: 336 ALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEH 395
L L+K M + G RP+ IT + VL +C +G++I A + G S +
Sbjct: 176 VLYLYKMM-----KISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI-GASSVVAV 229
Query: 396 YGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
++ + S+ G L +A ++ +W +++ H
Sbjct: 230 VSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFH 271
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH + GL + + L Y+ + +LQ + ++ + WN +I G A++
Sbjct: 112 QIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG 171
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P + Y+ M + PN T+ +LS+C + +G+Q+H + G S V V +
Sbjct: 172 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 231
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR---- 209
+LI+ Y+ G + A F V W+S+++ Y G D A +F+ M +
Sbjct: 232 SLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNME 291
Query: 210 -NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
N V++ ++ C+ G + L LF M
Sbjct: 292 INEVAFLNLLYACSHSGLKDKGLELFDMM 320
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 238/487 (48%), Gaps = 49/487 (10%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
VF + I+ QIH V G + L+ FY + ++A K+F +
Sbjct: 112 VFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRD 171
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
W II G+ R+ ++++ + +M + EPN TY +L + R G L G+ +HG
Sbjct: 172 VVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHG 228
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
++L + +LI+ G N+++ YV C
Sbjct: 229 LILKRA---------SLISLETG----------------------NALIDMYVKCEQLSD 257
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR-VEXXXXXXXXXXXXXX 257
A RVF E+ ++ VSW +MI+G R K+A+ LF M+ + ++
Sbjct: 258 AMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACA 317
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G + GRW+H Y+ + + + A++ MYA CG I A ++F + ++
Sbjct: 318 SLGAVDHGRWVHEYILTAGIKWDTH-----IGTAIVDMYAKCGYIETALEIFNGIRSKNV 372
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+W +++ A G G E+L F+ MV G +P+ +T + L ACCH G VDEGR
Sbjct: 373 FTWNALLGGLAIHGHGLESLRYFEEMVKLG-----FKPNLVTFLAALNACCHTGLVDEGR 427
Query: 378 RIFASM-NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
R F M +R + + P++EHYGCM+DLL RAG LDEA L++ MP+KP+ + GA+L C+
Sbjct: 428 RYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACK 487
Query: 437 IHKNSELASVVEPKLVAELDTD-GAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
L + + L + LD + +G VLLSNI+A +RW DV +R+ M G+ K
Sbjct: 488 --NRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 496 PGQSWIQ 502
PG S+I+
Sbjct: 546 PGSSYIE 552
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 195/423 (46%), Gaps = 49/423 (11%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFY-IASDQLQHAHKLFSTIDNP 77
+ L+ C++++ QI +Q++ L + II K+++F ++D ++ + +I +
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 78 -STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
S+ +N ++ YA P ++ Y+ VS P+ FT+ + AC + +REG+Q+
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HGIV G+ +++V+ +L++FY G A VF M R VVSW I+ G+ G +
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 197 DGARRVFDEMPIR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
A F +M + N+ ++ ++ GR
Sbjct: 189 KEALDTFSKMDVEPNLATYVCVL---VSSGR----------------------------- 216
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
G L LG+ IH + +R S+ NALI MY C + DA +VF ++ ++
Sbjct: 217 ---VGCLSLGKGIHGLILKR-----ASLISLETGNALIDMYVKCEQLSDAMRVFGELEKK 268
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
VSW SMI KEA+ LF M + G++PD L VL AC G VD
Sbjct: 269 DKVSWNSMISGLVHCERSKEAIDLFSLMQTSS----GIKPDGHILTSVLSACASLGAVDH 324
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
GR + + T GI +VD+ ++ G+++ A + + K N W ALLGG
Sbjct: 325 GRWVHEYI-LTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK-NVFTWNALLGGL 382
Query: 436 QIH 438
IH
Sbjct: 383 AIH 385
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 220/431 (51%), Gaps = 50/431 (11%)
Query: 107 STEAEPNGFTY-SFLLSACVRG-GL---LREGEQVHGIVLVKGYCSNVFVETNLINFYAG 161
S+ + +G+++ ++ LS+ VR GL R G H + L G+ S+V++ ++L+ Y
Sbjct: 108 SSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRD 167
Query: 162 RGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGC 221
G VE A +VF+EMP RNVVSWT MI+G
Sbjct: 168 SGEVENAY-------------------------------KVFEEMPERNVVSWTAMISGF 196
Query: 222 AQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQ 281
AQ+ R L L+ +MR++ + G L GR +H +
Sbjct: 197 AQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGL---- 252
Query: 282 QQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFK 341
+ + ++N+LI MY CG + DA+++F + + VSW SMI +A+ GL +A+ LF+
Sbjct: 253 -KSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFE 311
Query: 342 TMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVD 401
M+ G +PDAIT + VL +C HAG V EGR+ F M G+ P + HY C+VD
Sbjct: 312 LMMPKS----GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEH-GLKPELNHYSCLVD 366
Query: 402 LLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA-SVVEPKLVAELDTDGA 460
LL R G L EA LIENMP+KPN +WG+LL C++H + E +L+ E D
Sbjct: 367 LLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPD---C 423
Query: 461 AGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHS 520
A V L+N+YA W++ VR+ M + G+K PG SWI+IN V F A D ++
Sbjct: 424 AATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRM 483
Query: 521 YFIYEILSEII 531
I +L +I
Sbjct: 484 LEIVHVLHCLI 494
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 5/208 (2%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
H + G + + L+ Y S ++++A+K+F + + W +I G+A+
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWR 201
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++ Y +M + ++PN +T++ LLSAC G L +G VH L G S + + +
Sbjct: 202 VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----- 209
LI+ Y G ++ A +FD + VVSWNS++AGY G A +F+ M +
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ +++ +++ C G K+ F M
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLM 349
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 16 QQHVFT-LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
+ FT LL +C L Q +H Q + GL +I L+S Y L+ A ++F
Sbjct: 220 NDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIF 279
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV-STEAEPNGFTYSFLLSACVRGGLL 130
N WN +I GYA+ +++E + M+ + +P+ TY +LS+C GL+
Sbjct: 280 DQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLV 339
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR-SVVSWNSIL 187
+EG + ++ G + + L++ G +++A + + M + + V W S+L
Sbjct: 340 KEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 250/529 (47%), Gaps = 24/529 (4%)
Query: 21 TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
L+Q C+ + L + +H + +G I +LL Y L A K+F + N
Sbjct: 90 NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR 149
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN ++ GYA +E R++ E + ++++ +++ V+ E ++
Sbjct: 150 DLCSWNVMVNGYAEVGL----LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 138 GIV-LVKGYCSNVFV----ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
++ V N+F R G E H+ V W+S++ Y
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
CG D AR +FD++ ++VVSWT+MI + R ++ SLF E+ +
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
+LG+ +H Y+ R P +++L+ MY CG I A V
Sbjct: 326 LNACADLTTEELGKQVHGYM-----TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
P+ VSWTS+I A+ G EAL F ++ G +PD +T + VL AC HAG
Sbjct: 381 PKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG-----TKPDHVTFVNVLSACTHAGL 435
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
V++G F S+ +S +HY C+VDLL+R+G ++ +I MP+KP+ LW ++L
Sbjct: 436 VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVL 495
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
GGC + N +LA +L +++ + Y V ++NIYA A +W++ +R++M E+GV
Sbjct: 496 GGCSTYGNIDLAEEAAQELF-KIEPENPVTY-VTMANIYAAAGKWEEEGKMRKRMQEIGV 553
Query: 493 KKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
K PG SW +I H F+A D +H I E L E+ K+ + Y P
Sbjct: 554 TKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVP 602
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 157/333 (47%), Gaps = 13/333 (3%)
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRG 163
Q++ +P TY L+ C + L EG++VH + G+ + + L+ YA G
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQ 223
+ AR VFD M R + SWN ++ GY G + AR++FDEM ++ SWT M+ G +
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 224 KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD-LKLGRWIHWYVQQRIVARNQQ 282
K + ++AL L+ M+R ++ G+ IH + + R
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH-----IVRAGL 249
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
L ++L+ MY CG I +A +F K+ ++ VSWTSMI + K +E LF
Sbjct: 250 DSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE 309
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
+V RP+ T VL AC + G+++ M R G P +VD+
Sbjct: 310 LVGSCE-----RPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDM 363
Query: 403 LSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
++ G ++ A +++ P KP+ W +L+GGC
Sbjct: 364 YTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGC 395
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 258/515 (50%), Gaps = 49/515 (9%)
Query: 36 HSQVVLNGLSQKTNII--TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
H V+ GL + +N+ + L+ Y+ + + A + ++ + +I GY++
Sbjct: 188 HGLAVILGL-EVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++V+ ++ M+ + +PN +TY+ +L +C + G+ +HG+++ G+
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF-------- 298
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+ ++ S S+L Y+ C D + RVF + N VS
Sbjct: 299 -----------------------ESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS 335
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT++I+G Q GR + AL F +M R ++ + GR IH V
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ R++ S LI +Y CG A VF + + +S +MI ++A+ G G
Sbjct: 396 KYGFDRDKYAGS-----GLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+EAL LF+ M++ G ++P+ +T++ VL AC ++ V+EG +F S R I
Sbjct: 451 REALDLFERMINLG-----LQPNDVTVLSVLLACNNSRLVEEGCELFDSF-RKDKIMLTN 504
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
+HY CMVDLL RAG L+EA L + + P+ LW LL C++H+ E+A + K++
Sbjct: 505 DHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKIL- 562
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
E++ G G L+L+SN+YA +W VI ++ KM +M +KK P SW++IN H F+AG
Sbjct: 563 EIEP-GDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAG 621
Query: 514 DM-THKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
D+ +H +S I E L E+IK+S Y D + F
Sbjct: 622 DLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVF 656
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 192/457 (42%), Gaps = 80/457 (17%)
Query: 18 HVFT-LLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
H F+ LL+ C +I + I + ++ +G + + +KL+ + + +A ++F
Sbjct: 66 HNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISG-SKLVDASLKCGDIDYARQVFDG 124
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+ WN +I + ++VE YR M++ P+ +T S + A L +E
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 134 EQVHGIVLVKGY-CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
++ HG+ ++ G SNVFV + L++ Y G +A+ V D + ++ VV +++ GY
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY-- 242
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
+QKG +A+ F M +V+
Sbjct: 243 -----------------------------SQKGEDTEAVKAFQSMLVEKVQPNEYTYASV 273
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
D+ G+ IH ++ ++ + ++ +L+ MY C ++ D+ +VF +
Sbjct: 274 LISCGNLKDIGNGKLIHG-----LMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCI 328
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
+ VSWTS+I + G + AL F+ M+ D ++P++ TL L C +
Sbjct: 329 EYPNQVSWTSLISGLVQNGREEMALIEFRKMMR-----DSIKPNSFTLSSALRGCSNLAM 383
Query: 373 VDEGRRIFASMNR------TWGISPRIEHYG---------------CMVDLLS------- 404
+EGR+I + + + S I+ YG VD++S
Sbjct: 384 FEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYS 443
Query: 405 --RAGFLDEAHGLIE---NMPLKPNDALWGALLGGCQ 436
+ GF EA L E N+ L+PND ++L C
Sbjct: 444 YAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 19/252 (7%)
Query: 1 MLIERFVPASGRRSIQQHVF-TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLS 56
ML+E+ P ++ + ++L SC N++++ IH +V +G T LL+
Sbjct: 258 MLVEKVQP-------NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLT 310
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
Y+ + + ++F I+ P+ W +I G ++ ++ +R+M+ +PN FT
Sbjct: 311 MYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFT 370
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
S L C + EG Q+HGIV G+ + + + LI+ Y G + AR VFD +
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS 430
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEM------PIRNVVSWTTMIAGCAQKGRCKQA 230
+ V+S N+++ Y G A +F+ M P N V+ +++ C ++
Sbjct: 431 EVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP--NDVTVLSVLLACNNSRLVEEG 488
Query: 231 LSLFGEMRRARV 242
LF R+ ++
Sbjct: 489 CELFDSFRKDKI 500
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 235/445 (52%), Gaps = 18/445 (4%)
Query: 49 NIIT--KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV 106
N++T +L+ Y + ++ A +LF I W +I G R + +++ Y +M+
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEML 297
Query: 107 STEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVE 166
+P+ LLSA R +G Q+HG ++ +G+ F++ +I+FYA ++
Sbjct: 298 RCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIK 357
Query: 167 QARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGR 226
A F+ + + S N+++AG+V G + AR VFD+ +++ SW MI+G AQ
Sbjct: 358 LALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLS 417
Query: 227 CKQALSLFGEM-RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPS 285
+ AL LF EM ++V+ G L+ G+ H Y+ + P+
Sbjct: 418 PQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIP-----PN 472
Query: 286 VRLNNALIHMYASCGVIGDAYQVF--TKMPQRSTVS-WTSMIMAFAKQGLGKEALGLFKT 342
L A+I MYA CG I A +F TK ST+S W ++I A G K AL L+
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD 532
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
+ S ++P++IT + VL ACCHAG V+ G+ F SM GI P I+HYGCMVDL
Sbjct: 533 LQSLP-----IKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDL 587
Query: 403 LSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAG 462
L +AG L+EA +I+ MP+K + +WG LL + H N E+A + +L A + G G
Sbjct: 588 LGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHG--G 645
Query: 463 YLVLLSNIYAFAKRWQDVIAVRQKM 487
V+LSN+YA A RW+DV VR++M
Sbjct: 646 CKVMLSNVYADAGRWEDVALVREEM 670
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 200/419 (47%), Gaps = 41/419 (9%)
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
Y+ S +L A KLF + S + +I+GYA+++ +++E +R+M + N T
Sbjct: 117 YVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTL 176
Query: 118 SFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ 177
+ ++SAC G + + + + + VFV TNL++ Y ++ AR +FD M +
Sbjct: 177 ATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPE 236
Query: 178 RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
R++V+WN +L GY G + A +FD++ +++VSW TMI GC +K + +AL + EM
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 238 RR-----ARVEXXXXXXXXXXXXXXXXG---------------DLKLGRWIHWY-VQQRI 276
R + V G D IH+Y V I
Sbjct: 297 LRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 277 -VARNQQQPSVRLN----NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
+A Q + SV+ + NALI + G++ A +VF + + SW +MI +A+
Sbjct: 357 KLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSL 416
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
+ AL LF+ M+S V+PDAIT++ V A G ++EG+R +N + I P
Sbjct: 417 SPQLALHLFREMISSSQ----VKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS-TIPP 471
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGL------IENMPLKPNDALWGALLGGCQIHKNSELA 444
++D+ ++ G ++ A + I + + P W A++ G H +++LA
Sbjct: 472 NDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP----WNAIICGSATHGHAKLA 526
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 28/292 (9%)
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
L +C + G Q+H VL G SN ++ +++N YA + A VF +
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
S+N ++ GYV A ++FD MP R+ VS+TT+I G AQ + +A+ LF EMR
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
+ G G W + Q + + + + V ++ L+HMY C
Sbjct: 168 GIMLNEVTLATVISACSHLG----GIW-DCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 301 VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF-----KTMVSDGAGVDGVRP 355
+ DA ++F +MP+R+ V+W M+ ++K GL ++A LF K +VS G +DG
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDG--- 279
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAG 407
C +DE + M R G+ P MVDLLS +
Sbjct: 280 -----------CLRKNQLDEALVYYTEMLRC-GMKPS---EVMMVDLLSASA 316
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 234/484 (48%), Gaps = 43/484 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH + NGL + L++ Y + L A K+F + + ++ W+ ++ GY+++
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++V+ + +M S +P+ +T +L+AC L EG+Q+H +L G+ ++F T
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
L++ YA G + AR + FD + R+V
Sbjct: 362 ALVDMYAKAGCLADAR-------------------------------KGFDCLQERDVAL 390
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT++I+G Q ++AL L+ M+ A + L+LG+ +H +
Sbjct: 391 WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT- 449
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
++ V + +AL MY+ CG + D VF + P + VSW +MI + G G
Sbjct: 450 ----IKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQG 505
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
EAL LF+ M+++G + PD +T + ++ AC H GFV+ G F M+ G+ P++
Sbjct: 506 DEALELFEEMLAEG-----MEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKV 560
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
+HY CMVDLLSRAG L EA IE+ + LW LL C+ H EL KL+A
Sbjct: 561 DHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMA 620
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
L + ++ Y V LS IY R +DV V + M GV K G SWI++ H FV G
Sbjct: 621 -LGSRESSTY-VQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVG 678
Query: 514 DMTH 517
D H
Sbjct: 679 DTMH 682
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 210/455 (46%), Gaps = 54/455 (11%)
Query: 8 PASGRRSIQQHVFTLLQSCNN---IQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIAS 61
P++ + + H TLL+ + +NL+ +H Q++ G S L++FY
Sbjct: 3 PSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKC 62
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARS---HTPWKSVECYRQMVSTEAEPNGFTYS 118
+L AH +F+ I WN +I GY+++ + + ++ +R+M + + PN +T +
Sbjct: 63 GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLA 122
Query: 119 FLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
+ A G Q H +V+ +++V+T+L+ Y G VE VF M +R
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
+ +W+++++GY A +GR ++A+ +F
Sbjct: 183 NTYTWSTMVSGY-------------------------------ATRGRVEEAIKVFNLFL 211
Query: 239 RARVEXXXXXXXXXXXXXXXXGDL--KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
R + E + LGR IH I +N V L+NAL+ MY
Sbjct: 212 REKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHC-----ITIKNGLLGFVALSNALVTMY 266
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
+ C + +A ++F R++++W++M+ +++ G EA+ LF M S G++P
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS-----AGIKPS 321
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
T++ VL AC +++EG+++ + + + G + +VD+ ++AG L +A
Sbjct: 322 EYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAGCLADARKGF 380
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKL 451
+ + + + ALW +L+ G + ++E A ++ ++
Sbjct: 381 DCLQ-ERDVALWTSLISGYVQNSDNEEALILYRRM 414
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 227/469 (48%), Gaps = 47/469 (10%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
H V+ +G I + L Y + + A ++F + P W ++ ++++
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 95 PWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+++ + M + P+G T+ +L+AC L++G+++HG ++ G SNV VE+
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+L++ Y CG AR+VF+ M +N VS
Sbjct: 305 SLLDMYG-------------------------------KCGSVREARQVFNGMSKKNSVS 333
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W+ ++ G Q G ++A+ +F EM E ++LG+ IH
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYV 389
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+R N V + +ALI +Y G I A +V++KM R+ ++W +M+ A A+ G G
Sbjct: 390 RRGCFGN-----VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRG 444
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+EA+ F MV G ++PD I+ I +L AC H G VDEGR F M +++GI P
Sbjct: 445 EEAVSFFNDMVKKG-----IKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGT 499
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
EHY CM+DLL RAG +EA L+E + + +LWG LLG C + ++ + K +
Sbjct: 500 EHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMM 559
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
EL+ Y VLLSN+Y R D + +R+ M+ GV K GQSWI
Sbjct: 560 ELEPKYHMSY-VLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 180/421 (42%), Gaps = 60/421 (14%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIA-SDQLQHAHKLFSTIDN 76
+LLQ+CN + + I Q H+ VV +GL N+ LLS Y ++ ++F
Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFV 125
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
W ++ GY K++E + +MVS + N FT S + AC G +R G
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCF 185
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG+V+ G+ N F+ + L Y AR VFD M + V+ W ++L+ + +
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLY 245
Query: 197 DGARRVFDEMP-----IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
+ A +F M + + ++ T++ C G +RR
Sbjct: 246 EEALGLFYAMHRGKGLVPDGSTFGTVLTAC-------------GNLRR------------ 280
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
LK G+ IH + + N V + ++L+ MY CG + +A QVF
Sbjct: 281 ----------LKQGKEIHGKLITNGIGSN-----VVVESSLLDMYGKCGSVREARQVFNG 325
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
M ++++VSW++++ + + G ++A+ +F+ M D VL AC
Sbjct: 326 MSKKNSVSWSALLGGYCQNGEHEKAIEIFREM---------EEKDLYCFGTVLKACAGLA 376
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
V G+ I R G + ++DL ++G +D A + M ++ N W A+
Sbjct: 377 AVRLGKEIHGQYVRR-GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAM 434
Query: 432 L 432
L
Sbjct: 435 L 435
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 117/227 (51%), Gaps = 11/227 (4%)
Query: 21 TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
T+L +C N++ L Q IH +++ NG+ + + LL Y ++ A ++F+ +
Sbjct: 270 TVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK 329
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
++ W+ ++ GY ++ K++E +R+M E + + + +L AC +R G+++H
Sbjct: 330 NSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIH 385
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G + +G NV VE+ LI+ Y G ++ A V+ M R++++WN++L+ G +
Sbjct: 386 GQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGE 445
Query: 198 GARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
A F++M + + +S+ ++ C G + + F M ++
Sbjct: 446 EAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKS 492
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 244/497 (49%), Gaps = 29/497 (5%)
Query: 22 LLQSCNN---IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+L++C+ ++ +QIH + GL + L+ Y+ L + ++F +
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
+ +N +I GY + + E + M N +++ ++S + +G +
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLM--PMEMKNLISWNSMISGYAQTS---DGVDIAS 241
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+ ++ ++I+ Y G +E A+ +FD M +R VV+W +++ GY G
Sbjct: 242 KLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHH 301
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR-ARVEXXXXXXXXXXXXXX 257
A+ +FD+MP R+VV++ +M+AG Q +AL +F +M + + +
Sbjct: 302 AKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIA 361
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G L +H Y+ ++ Q +L ALI MY+ CG I A VF + +S
Sbjct: 362 QLGRLSKAIDMHLYIVEK-----QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSI 416
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
W +MI A GLG+ A + + ++PD IT + VL AC H+G V EG
Sbjct: 417 DHWNAMIGGLAIHGLGESAFDMLLQIERLS-----LKPDDITFVGVLNACSHSGLVKEGL 471
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
F M R I PR++HYGCMVD+LSR+G ++ A LIE MP++PND +W L C
Sbjct: 472 LCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSH 531
Query: 438 HKNSELASVVEPKLVAELDTDGAAGY----LVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
HK E +V L+ + AGY VLLSN+YA W+DV VR M E ++
Sbjct: 532 HKEFETGELVAKHLILQ------AGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIE 585
Query: 494 KPPGQSWIQINGVVHDF 510
K PG SWI+++G VH+F
Sbjct: 586 KIPGCSWIELDGRVHEF 602
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 207/444 (46%), Gaps = 47/444 (10%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQ---------LQHAHKL-- 70
+L SC ++ QIH +++ G+ + +N+ T+++ + +S + + H + +
Sbjct: 18 VLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCS 77
Query: 71 --FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
F +++P +WN +I+ ++ P +++ M+ + F+ S +L AC R G
Sbjct: 78 FSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLG 135
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
++ G Q+HG + G S++F++ LI Y G + +R +FD M +R VS+NS++
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 189 GYVSCGDFDGARRVFDEMP--IRNVVSWTTMIAGCAQKGR-CKQALSLFGEMRRARVEXX 245
GYV CG AR +FD MP ++N++SW +MI+G AQ A LF +M +
Sbjct: 196 GYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDL--- 252
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
G +K GR ++ R V +I YA G + A
Sbjct: 253 ------ISWNSMIDGYVKHGRIEDAKGLFDVMPRRD----VVTWATMIDGYAKLGFVHHA 302
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
+F +MP R V++ SM+ + + EAL +F M + + PD TL++VL
Sbjct: 303 KTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESH----LLPDDTTLVIVLP 358
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYG-----CMVDLLSRAGFLDEAHGLIENMP 420
A G R+ +++ I + + G ++D+ S+ G + A + E +
Sbjct: 359 AIAQLG------RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE 412
Query: 421 LKPNDALWGALLGGCQIHKNSELA 444
K D W A++GG IH E A
Sbjct: 413 NKSIDH-WNAMIGGLAIHGLGESA 435
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 237/513 (46%), Gaps = 43/513 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH+ V++ G + L + Y ++Q LF + W +I Y R
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
K+VE + +M +++ PN T++ + SAC L GEQ+H VL G ++ V
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS-- 348
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
NS++ Y +CG+ A +F M R+++SW
Sbjct: 349 -----------------------------NSMMKMYSTCGNLVSASVLFQGMRCRDIISW 379
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+T+I G Q G ++ F MR++ + ++ GR +H
Sbjct: 380 STIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALA-- 437
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
+ +Q +VR ++LI+MY+ CG I +A +F + + VS T+MI +A+ G K
Sbjct: 438 -LCFGLEQNSTVR--SSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSK 494
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EA+ LF+ + G RPD++T I VL AC H+G +D G F M T+ + P E
Sbjct: 495 EAIDLFEKSLKVG-----FRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKE 549
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HYGCMVDLL RAG L +A +I M K +D +W LL C+ + E +++ E
Sbjct: 550 HYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL-E 608
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
LD A LV L+NIY+ ++ VR+ M GV K PG S I+I V FV+GD
Sbjct: 609 LDPTCATA-LVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGD 667
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
H S IY IL + + ++ + AF
Sbjct: 668 RFHPQSEDIYNILELAVSGAEAHRFDCTLKRAF 700
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 177/410 (43%), Gaps = 52/410 (12%)
Query: 30 QNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGY 89
+N+++I +QV++ K + + L S I + L+ A ++F + + W II+ Y
Sbjct: 28 ENIVRISNQVMV-----KFDPNSHLRSL-INAGNLRAARQVFDKMPHGDIVSWTSIIKRY 81
Query: 90 ARSHTPWKSVECYRQM--VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCS 147
++ +++ + M V P+ S +L AC + + GE +H + S
Sbjct: 82 VTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLS 141
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP 207
+V+V ++L++ Y G +++ SC RVF EMP
Sbjct: 142 SVYVGSSLLDMYKRVGKIDK------------------------SC-------RVFSEMP 170
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
RN V+WT +I G GR K+ L+ F EM R+ +K G+
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
IH +V R ++ + N+L MY CG + D +F M +R VSWTS+I+A+
Sbjct: 231 IHTHVIVRGFV-----TTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAY 285
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
+ G +A+ F M + V P+ T + AC + G ++ ++ +
Sbjct: 286 KRIGQEVKAVETFIKMRN-----SQVPPNEQTFASMFSACASLSRLVWGEQLHCNV-LSL 339
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG-CQ 436
G++ + M+ + S G L A L + M + + W ++GG CQ
Sbjct: 340 GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGGYCQ 388
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 164/394 (41%), Gaps = 45/394 (11%)
Query: 22 LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+L++C N+ +H+ V L + + LL Y ++ + ++FS + +
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
W II G + + + + +M +E + +T++ L AC ++ G+ +H
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V+V+G+ + + V NS+ Y CG+
Sbjct: 234 HVIVRGFVTTLCVA-------------------------------NSLATMYTECGEMQD 262
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
+F+ M R+VVSWT++I + G+ +A+ F +MR ++V
Sbjct: 263 GLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACAS 322
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
L G +H V + S+ ++N+++ MY++CG + A +F M R +
Sbjct: 323 LSRLVWGEQLHCNVLSLGL-----NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDII 377
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
SW+++I + + G G+E F M G +P L +L + ++ GR+
Sbjct: 378 SWSTIIGGYCQAGFGEEGFKYFSWMRQ-----SGTKPTDFALASLLSVSGNMAVIEGGRQ 432
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
+ A + +G+ ++++ S+ G + EA
Sbjct: 433 VHA-LALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 127/320 (39%), Gaps = 39/320 (12%)
Query: 16 QQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS 72
+Q ++ +C ++ L+ Q+H V+ GL+ ++ ++ Y L A LF
Sbjct: 310 EQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ 369
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
+ W+ II GY ++ + + + M + +P F + LLS ++
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEG 429
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G QVH + L G N V ++LIN Y+ G +++A +F + +VS
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVS---------- 479
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
T MI G A+ G+ K+A+ LF + +
Sbjct: 480 ---------------------LTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISV 518
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G L LG H++ + +P+ ++ + G + DA ++ +M
Sbjct: 519 LTACTHSGQLDLG--FHYF--NMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEM 574
Query: 313 P-QRSTVSWTSMIMAFAKQG 331
++ V WT++++A +G
Sbjct: 575 SWKKDDVVWTTLLIACKAKG 594
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/491 (29%), Positives = 233/491 (47%), Gaps = 46/491 (9%)
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
Y+ ++ A KLF + + W +I G ++ ++++ ++ M+ + +
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 118 SFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ 177
+ +++AC G QVHG+++ G+ +V +LI FYA
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYA----------------- 271
Query: 178 RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+C +R+VFDE V WT +++G + + + ALS+F M
Sbjct: 272 --------------NCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGM 317
Query: 238 RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
R + G L G+ +H + + + + N+L+ MY+
Sbjct: 318 LRNSILPNQSTFASGLNSCSALGTLDWGKEMH-----GVAVKLGLETDAFVGNSLVVMYS 372
Query: 298 SCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
G + DA VF K+ ++S VSW S+I+ A+ G GK A +F M+ PD
Sbjct: 373 DSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK-----EPDE 427
Query: 358 ITLIVVLCACCHAGFVDEGRRIFASMNRTWG-ISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
IT +L AC H GF+++GR++F M+ I +I+HY CMVD+L R G L EA LI
Sbjct: 428 ITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELI 487
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKR 476
E M +KPN+ +W ALL C++H + + + LD+ +A Y VLLSNIYA A R
Sbjct: 488 ERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIF-NLDSKSSAAY-VLLSNIYASAGR 545
Query: 477 WQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHV 536
W +V +R KM + G+ K PG SW+ I G H+F +GD H IYE L + ++
Sbjct: 546 WSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKE 603
Query: 537 DSYEPDITGAF 547
Y PD A
Sbjct: 604 LGYAPDYRSAL 614
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 184/399 (46%), Gaps = 20/399 (5%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
L+ ++ S ++ A ++F+ + +P +++ +I GY RS+ ++ + +M +
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV--- 97
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
+++ ++S CV G + ++ + + +V T ++N G V+QA +F
Sbjct: 98 -VSWNSMISGCVECGDMNTAVKLFDEMPER----SVVSWTAMVNGCFRSGKVDQAERLFY 152
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
M + +WNS++ GY+ G D A ++F +MP +NV+SWTTMI G Q R +AL L
Sbjct: 153 QMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDL 212
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
F M R ++ +G +H + + + ++ +LI
Sbjct: 213 FKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY-----VSASLI 267
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
YA+C IGD+ +VF + WT+++ ++ ++AL +F M+ + +
Sbjct: 268 TFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR-----NSI 322
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
P+ T L +C G +D G+ + + G+ +V + S +G +++A
Sbjct: 323 LPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL-GLETDAFVGNSLVVMYSDSGNVNDAV 381
Query: 414 GLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
+ + K + W +++ GC H + A V+ +++
Sbjct: 382 SVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMI 419
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 128/295 (43%), Gaps = 35/295 (11%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
IQ+H ++ G + + L++FY ++ + K+F + VW ++ GY+ +
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
++ + M+ PN T++ L++C G L G+++HG+ + G ++ FV
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
+L+ Y+ G V A VF + ++S+VSWNSI
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSI-------------------------- 398
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
I GCAQ GR K A +FG+M R E G L+ GR + +Y+
Sbjct: 399 -----IVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR-STVSWTSMIMA 326
I N ++ ++ + CG + +A ++ +M + + + W +++ A
Sbjct: 454 SSGI---NHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 234/490 (47%), Gaps = 64/490 (13%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+HS+ + G+ + + L+S Y + A K+F + + WN +I GY
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM---- 123
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE----GEQVHGIVLVKGYCSNVF 150
NG A + GL E V I ++KGY +
Sbjct: 124 -----------------SNG-------DAVLASGLFEEISVCRNTVTWIEMIKGYGKRIE 159
Query: 151 VE-------------------TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
+E + ++ Y +E AR F+ + +++ W+ +++GY
Sbjct: 160 IEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYF 219
Query: 192 SCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
GD AR +F + R++V W T+IAG AQ G A+ F M+ E
Sbjct: 220 RIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSS 279
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
G L +GR +H + R + NQ ++NALI MYA CG + +A VF
Sbjct: 280 ILSACAQSGRLDVGREVHSLINHRGIELNQ-----FVSNALIDMYAKCGDLENATSVFES 334
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
+ RS SMI A G GKEAL +F TM S +D ++PD IT I VL AC H G
Sbjct: 335 ISVRSVACCNSMISCLAIHGKGKEALEMFSTMES----LD-LKPDEITFIAVLTACVHGG 389
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
F+ EG +IF+ M +T + P ++H+GC++ LL R+G L EA+ L++ M +KPND + GAL
Sbjct: 390 FLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGAL 448
Query: 432 LGGCQIHKNSELASVVEP--KLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
LG C++H ++E+A V + + + +L +SN+YA +RWQ A+R +M +
Sbjct: 449 LGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEK 508
Query: 490 MGVKKPPGQS 499
G++K PG S
Sbjct: 509 RGLEKSPGLS 518
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 42/303 (13%)
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G+ +H + G CS+V V ++LI+ Y G V AR VFD M +R+V +WN+++ GY+S
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 193 CGDFDGARRVFDEMPI-RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
GD A +F+E+ + RN V+W MI G ++ ++A LF M
Sbjct: 125 NGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM-------------- 170
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRL-------NNA-----LIHMYASC 299
+L W V + N++ R NA ++ Y
Sbjct: 171 ---------PFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRI 221
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G + +A +F ++ R V W ++I +A+ G +A+ F M +G PDA+T
Sbjct: 222 GDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQG-----EGYEPDAVT 276
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+ +L AC +G +D GR + + +N GI ++D+ ++ G L+ A + E++
Sbjct: 277 VSSILSACAQSGRLDVGREVHSLINHR-GIELNQFVSNALIDMYAKCGDLENATSVFESI 335
Query: 420 PLK 422
++
Sbjct: 336 SVR 338
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 17/220 (7%)
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+ +I +G QAL L+G +RR V + LG+ +H +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
V + V + ++LI MY CG + A +VF +MP+R+ +W +MI + G
Sbjct: 75 FGVCSD-----VMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAV 129
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
A GLF+ + V + +T I ++ +++ R +F M ++
Sbjct: 130 LASGLFEEI--------SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFEL---KNVK 178
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ M+ + +++A E++P K N +W ++ G
Sbjct: 179 AWSVMLGVYVNNRKMEDARKFFEDIPEK-NAFVWSLMMSG 217
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++HS + G+ + L+ Y L++A +F +I S N +I A
Sbjct: 295 EVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHG 354
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+++E + M S + +P+ T+ +L+ACV GG L EG ++ + + NV
Sbjct: 355 KGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFG 414
Query: 154 NLINFYAGRGGVEQARHVFDGM 175
LI+ G +++A + M
Sbjct: 415 CLIHLLGRSGKLKEAYRLVKEM 436
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 262/544 (48%), Gaps = 47/544 (8%)
Query: 3 IERFVPASGRRSIQQHVFTLLQSCNNIQNLIQI------HSQVVLNGLSQKTNIITKLLS 56
IE F+ A G + I T L + + + L Q+ H V N I+ L+
Sbjct: 302 IELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV 361
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
Y + + +F ++ WN +I + ++ + + +M + + T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+ LLSA G+Q H ++ +G + + LI+ Y+ G + ++ +F+G
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMYSKSGLIRISQKLFEG-- 478
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
+GY R+ +W +MI+G Q G ++ +F +
Sbjct: 479 -----------SGYAE----------------RDQATWNSMISGYTQNGHTEKTFLVFRK 511
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M + G + LG+ +H + ++ + +N V + +AL+ MY
Sbjct: 512 MLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQN-----VFVASALVDMY 566
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
+ G I A +F++ +R++V++T+MI+ + + G+G+ A+ LF +M G ++PD
Sbjct: 567 SKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESG-----IKPD 621
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
AIT + VL AC ++G +DEG +IF M + I P EHY C+ D+L R G ++EA+ +
Sbjct: 622 AITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFV 681
Query: 417 ENMPLKPNDA-LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK 475
+ + + N A LWG+LLG C++H ELA V +L +GY VLLSN+YA +
Sbjct: 682 KGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQ 741
Query: 476 RWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSH 535
+W+ V VR+ M E G+KK G+S I+I G V+ FV+ D H HS IY+++ + K
Sbjct: 742 KWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Query: 536 VDSY 539
DS+
Sbjct: 802 GDSF 805
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 196/449 (43%), Gaps = 60/449 (13%)
Query: 21 TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYI----ASDQLQH--AHKLF 71
+ L++C +NL +H ++ + + L++ Y+ A D ++ K+F
Sbjct: 112 STLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
+ + WN +I Y ++ ++ + M+ E +P+ ++ + A ++
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 132 EGEQVHGIVLVKG--YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
+ +G++L G Y ++FV ++ I+ YA G +E +R VFD +R++ WN+++
Sbjct: 232 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGV 291
Query: 190 YVSCGDFDGARRVFDE-MPIRNVVS--WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
YV + +F E + + +VS T ++A A
Sbjct: 292 YVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASA------------------------ 327
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
++LGR H + V++N ++ + + N+L+ MY+ CG + ++
Sbjct: 328 ---------VSALQQVELGRQFHGF-----VSKNFRELPIVIVNSLMVMYSRCGSVHKSF 373
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
VF M +R VSW +MI AF + GL E L L M G + D IT+ +L A
Sbjct: 374 GVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI-----DYITVTALLSA 428
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND- 425
+ + G++ A + R + Y ++D+ S++G + + L E D
Sbjct: 429 ASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQ 486
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAE 454
A W +++ G + ++E +V K++ +
Sbjct: 487 ATWNSMISGYTQNGHTEKTFLVFRKMLEQ 515
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 161/388 (41%), Gaps = 55/388 (14%)
Query: 44 LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYR 103
L+ +T I LS Q A +LF I P+T +WN II G+ ++ P +++ Y
Sbjct: 35 LTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYS 94
Query: 104 QMVSTEAEPN--GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAG 161
+M T N +TYS L AC L+ G+ VH ++ S+ V +L+N Y
Sbjct: 95 RMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVS 154
Query: 162 RGGV------EQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV---- 211
+ R VFD M +++VV+WN++++ YV G A R F M V
Sbjct: 155 CLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSP 214
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
VS+ + + K+A +G M LKLG Y
Sbjct: 215 VSFVNVFPAVSISRSIKKANVFYGLM------------------------LKLG---DEY 247
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
V+ V ++ I MYA G I + +VF +R+ W +MI + +
Sbjct: 248 VKDLFVV-----------SSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
E++ LF + G + D +T ++ A V+ GR+ +++ + P
Sbjct: 297 CLVESIELFL----EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+ MV + SR G + ++ G+ +M
Sbjct: 353 IVIVNSLMV-MYSRCGSVHKSFGVFLSM 379
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 259/508 (50%), Gaps = 53/508 (10%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H+ +V +G+++ T I KL++FY+ ++ A K+F + + +I AR+
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGY 97
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE-GEQVHGIVLVKGYCSNVFVET 153
+S++ +R+M + + F LL A R L RE G+ +H +VL Y S+ F+ +
Sbjct: 98 YQESLDFFREMYKDGLKLDAFIVPSLLKAS-RNLLDREFGKMIHCLVLKFSYESDAFIVS 156
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI----- 208
+LI+ Y+ G V AR VF +G++ +V +N++++GY + D A + +M +
Sbjct: 157 SLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKP 216
Query: 209 ---------------RN-------------------VVSWTTMIAGCAQKGRCKQALSLF 234
RN VVSWT++I+G + ++A F
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
+M + +K G+ IH Y +V + VR +AL+
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGY---SVVTGLEDHGFVR--SALLD 331
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MY CG I +A +F K P+++TV++ SMI +A GL +A+ LF M + G +
Sbjct: 332 MYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE-----K 386
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
D +T +L AC HAG D G+ +F M + I PR+EHY CMVDLL RAG L EA+
Sbjct: 387 LDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYE 446
Query: 415 LIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFA 474
+I+ M ++P+ +WGALL C+ H N ELA + K +AEL+ + +G +LL+++YA A
Sbjct: 447 MIKAMRMEPDLFVWGALLAACRNHGNMELARIA-AKHLAELEPEN-SGNGLLLTSLYANA 504
Query: 475 KRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
W+ V+ +++ + + ++ G SW++
Sbjct: 505 GSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 162 RGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGC 221
RG V A V G+ + + ++ ++ YV CG AR+VFDEMP R++ MI C
Sbjct: 34 RGRVLHAHLVTSGIARLTRIA-AKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGAC 92
Query: 222 AQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQ 281
A+ G +++L F EM + ++ D + G+ IH +V +
Sbjct: 93 ARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHC-----LVLKFS 147
Query: 282 QQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFK 341
+ + ++LI MY+ G +G+A +VF+ + ++ V + +MI +A EAL L K
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVK 207
Query: 342 TMVSDGAGVDGVRPDAIT 359
M + G++PD IT
Sbjct: 208 DM-----KLLGIKPDVIT 220
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 140/455 (30%), Positives = 231/455 (50%), Gaps = 46/455 (10%)
Query: 83 NHIIRGYARSHTPWKSVECYR-QMVSTEAEPNGFTYSFLL--SACVRGGLLREGEQVHGI 139
NH ++ Y S P K++ +R + + + + F+ F + S+ + L +G Q+H +
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSL-DGRQIHAL 90
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
V G+ + + ++T+L+ FY+ S GD D A
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYS-------------------------------SVGDVDYA 119
Query: 200 RRVFDEMPIR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
R+VFDE P + N+V WT MI+ + +A+ LF M ++E
Sbjct: 120 RQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACAD 179
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
G +++G I+ + I + + + L N+L++MY G A ++F + ++
Sbjct: 180 LGAVQMGEEIY---SRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVT 236
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV-RPDAITLIVVLCACCHAGFVDEGR 377
++TSMI +A G +E+L LFK M + D V P+ +T I VL AC H+G V+EG+
Sbjct: 237 TYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK 296
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
R F SM + + PR H+GCMVDL R+G L +AH I MP+KPN +W LLG C +
Sbjct: 297 RHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSL 356
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H N EL V+ ++ ELD D Y V LSNIYA W + +R ++ + ++ PG
Sbjct: 357 HGNVELGEEVQRRIF-ELDRDHVGDY-VALSNIYASKGMWDEKSKMRDRVRK---RRMPG 411
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIK 532
+SWI++ ++++FV+G + + EI SE+++
Sbjct: 412 KSWIELGSIINEFVSGPDNNDEQLMMGEI-SEVLR 445
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 13/217 (5%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS-TIDNPSTTVWNHIIRGYARS 92
QIH+ V G + I T L+ FY + + +A ++F T + + +W +I Y +
Sbjct: 86 QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTEN 145
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH--GIVLVKGYCSNVF 150
+++E +++M + + E +G + LSAC G ++ GE+++ I + ++
Sbjct: 146 ENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLT 205
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP--- 207
+ +L+N Y G E+AR +FD ++ V ++ S++ GY G + +F +M
Sbjct: 206 LRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTID 265
Query: 208 -------IRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
N V++ ++ C+ G ++ F M
Sbjct: 266 QSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSM 302
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/499 (29%), Positives = 246/499 (49%), Gaps = 28/499 (5%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
SG V ++L++C ++N++ IH+Q + NGL + T L+ Y ++
Sbjct: 98 SGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIEL 157
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
A K F I +T WN ++ GY S ++ R++ E + +++ ++S+ +
Sbjct: 158 AKKAFDDIAEKNTVSWNSLLHGYLES----GELDEARRVFDKIPEKDAVSWNLIISSYAK 213
Query: 127 GGLLREGEQVHGIVLVKGYCS-NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
G + + + +K S N+ LI Y ++ AR FD M Q++ VSW +
Sbjct: 214 KGDMGNACSLFSAMPLKSPASWNI-----LIGGYVNCREMKLARTYFDAMPQKNGVSWIT 268
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM--RRARVE 243
+++GY GD A +F M ++ + + MIA Q G+ K AL LF +M R + ++
Sbjct: 269 MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQ 328
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
G+ G W+ Y+ + + + L+ +LI +Y G
Sbjct: 329 PDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDD-----LLSTSLIDLYMKGGDFA 383
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
A+++F+ + ++ TVS+++MIM G+ EA LF M+ + P+ +T +
Sbjct: 384 KAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKK-----IPPNVVTFTGL 438
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L A H+G V EG + F SM + + P +HYG MVD+L RAG L+EA+ LI++MP++P
Sbjct: 439 LSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQP 497
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAV 483
N +WGALL +H N E + V +L+TD GYL L+ IY+ RW D V
Sbjct: 498 NAGVWGALLLASGLHNNVEFGEIACSHCV-KLETD-PTGYLSHLAMIYSSVGRWDDARTV 555
Query: 484 RQKMIEMGVKKPPGQSWIQ 502
R + E + K G SW++
Sbjct: 556 RDSIKEKKLCKTLGCSWVE 574
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 207/450 (46%), Gaps = 50/450 (11%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIIT-KLLSFY--IASDQLQHAHKLFSTIDNPS 78
LQ C ++ Q+H+Q+V+N + I+ + L F + + + + ++ +
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHD 68
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
+ W ++R ++ ++V+ Y M ++ P+ + +L AC + + +G+ +H
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
L G C V+V+T L+ Y+ G +E A+ FD + +++ VSWNS+L GY+ G+ D
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
ARRVFD++P ++ VSW +I+ A+KG A SLF M
Sbjct: 189 ARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM---------------PLKSPA 233
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNN----ALIHMYASCGVIGDAYQVFTKMPQ 314
++ +G +++ ++ +AR + N +I Y G + A ++F M +
Sbjct: 234 SWNILIGGYVN--CREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSK 291
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+ + + +MI + + G K+AL LF M+ + ++PD ITL V+ A G
Sbjct: 292 KDKLVYDAMIACYTQNGKPKDALKLFAQMLERNS---YIQPDEITLSSVVSANSQLGNTS 348
Query: 375 EGRRIFASMNRTWGISPRIEH--------YGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
G TW S EH ++DL + G +A + N+ K +
Sbjct: 349 FG---------TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTV 398
Query: 427 LWGALLGGCQIH-----KNSELASVVEPKL 451
+ A++ GC I+ NS +++E K+
Sbjct: 399 SYSAMIMGCGINGMATEANSLFTAMIEKKI 428
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 233/514 (45%), Gaps = 44/514 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H VV++GL I L+S Y ++ + ++ + WN +I GYA
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACV-RGGLLREGEQVHGIVLVKGYCSNVFVET 153
P K++ ++ M N T +LSAC+ G LL G+ +H ++ G+ S+ V+
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 486
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+LI YA CGD ++ +F+ + RN+++
Sbjct: 487 SLITMYA-------------------------------KCGDLSSSQDLFNGLDNRNIIT 515
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W M+A A G ++ L L +MR V L+ G+ +H
Sbjct: 516 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG--- 572
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + + + NA MY+ CG IG+ ++ RS SW +I A + G
Sbjct: 573 --LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 630
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+E F M+ G ++P +T + +L AC H G VD+G + + R +G+ P I
Sbjct: 631 EEVCATFHEMLEMG-----IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAI 685
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
EH C++DLL R+G L EA I MP+KPND +W +LL C+IH N + L +
Sbjct: 686 EHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL-S 744
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
+L+ + + Y VL SN++A RW+DV VR++M +KK SW+++ V F G
Sbjct: 745 KLEPEDDSVY-VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 803
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
D TH + IY L +I K Y D + A
Sbjct: 804 DRTHPQTMEIYAKLEDIKKLIKESGYVADTSQAL 837
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 172/405 (42%), Gaps = 49/405 (12%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+Q+H V +GL + T +L Y + + K+F + + + W ++ GY+
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE---GEQVHGIVLVKGYCSNV 149
P + ++ Y+ M N + S ++S+C GLL++ G Q+ G V+ G S +
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLESKL 178
Query: 150 FVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR 209
VE +LI+ S G+ D A +FD+M R
Sbjct: 179 AVENSLISMLG-------------------------------SMGNVDYANYIFDQMSER 207
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
+ +SW ++ A AQ G +++ +F MRR E K GR IH
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 267
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
+V + V + N L+ MYA G +A VF +MP + +SW S++ +F
Sbjct: 268 G-----LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
G +ALGL +M+S G V + +T L AC F ++G RI + G+
Sbjct: 323 DGRSLDALGLLCSMISSGKSV-----NYVTFTSALAACFTPDFFEKG-RILHGLVVVSGL 376
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+V + + G + E+ ++ MP + + W AL+GG
Sbjct: 377 FYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 420
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 37/263 (14%)
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG-LLREGEQVHGIV 140
WN ++ G R + +E +R+M +P+ F + L++AC R G + REG QVHG V
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
G S+V+V T +++ Y + G VSC +R
Sbjct: 69 AKSGLLSDVYVSTAILHLYG--------------------------VYGLVSC-----SR 97
Query: 201 RVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
+VF+EMP RNVVSWT+++ G + KG ++ + ++ MR V
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 157
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
D LGR I + Q V ++ + + + N+LI M S G + A +F +M +R T+SW
Sbjct: 158 DESLGRQI---IGQ--VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 212
Query: 321 TSMIMAFAKQGLGKEALGLFKTM 343
S+ A+A+ G +E+ +F M
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLM 235
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 166/414 (40%), Gaps = 62/414 (14%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH VV G + LL Y + + A+ +F + WN ++ +
Sbjct: 266 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 325
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++ M+S+ N T++ L+AC +G +HG+V+V G N +
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----N 210
L++ Y G + ++R V M +R VV+WN+++ GY D D A F M + N
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
++ ++++ C G L+ G+ +H
Sbjct: 446 YITVVSVLSACLLPGDL----------------------------------LERGKPLHA 471
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
Y+ + A + V+ N+LI MYA CG + + +F + R+ ++W +M+ A A
Sbjct: 472 YI---VSAGFESDEHVK--NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 526
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G G+E L L M S GV D + L A ++EG+++ +
Sbjct: 527 GHGEEVLKLVSKMRS-----FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG-----LAVK 576
Query: 391 PRIEH----YGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL--WGALLGGCQIH 438
EH + D+ S+ G + E +++ +P N +L W L+ H
Sbjct: 577 LGFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPSWNILISALGRH 627
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 110/217 (50%), Gaps = 16/217 (7%)
Query: 206 MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDL-KL 264
MP+RN VSW TM++G + G + + F +M ++ G + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 265 GRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMI 324
G +H +V A++ V ++ A++H+Y G++ + +VF +MP R+ VSWTS++
Sbjct: 61 GVQVHGFV-----AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 115
Query: 325 MAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE--GRRIFAS 382
+ ++ +G +E + ++K M +G G + ++++L++ C DE GR+I
Sbjct: 116 VGYSDKGEPEEVIDIYKGMRGEGVGCN---ENSMSLVISSCGLLK----DESLGRQIIGQ 168
Query: 383 MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+ ++ G+ ++ ++ +L G +D A+ + + M
Sbjct: 169 VVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQM 204
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 233/514 (45%), Gaps = 44/514 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H VV++GL I L+S Y ++ + ++ + WN +I GYA
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACV-RGGLLREGEQVHGIVLVKGYCSNVFVET 153
P K++ ++ M N T +LSAC+ G LL G+ +H ++ G+ S+ V+
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 503
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+LI YA CGD ++ +F+ + RN+++
Sbjct: 504 SLITMYA-------------------------------KCGDLSSSQDLFNGLDNRNIIT 532
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W M+A A G ++ L L +MR V L+ G+ +H
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG--- 589
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + + + NA MY+ CG IG+ ++ RS SW +I A + G
Sbjct: 590 --LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 647
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+E F M+ G ++P +T + +L AC H G VD+G + + R +G+ P I
Sbjct: 648 EEVCATFHEMLEMG-----IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAI 702
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
EH C++DLL R+G L EA I MP+KPND +W +LL C+IH N + L +
Sbjct: 703 EHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL-S 761
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
+L+ + + Y VL SN++A RW+DV VR++M +KK SW+++ V F G
Sbjct: 762 KLEPEDDSVY-VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 820
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
D TH + IY L +I K Y D + A
Sbjct: 821 DRTHPQTMEIYAKLEDIKKLIKESGYVADTSQAL 854
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 173/405 (42%), Gaps = 49/405 (12%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+Q+H V +GL + T +L Y + + K+F + + + W ++ GY+
Sbjct: 79 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 138
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE---GEQVHGIVLVKGYCSNV 149
P + ++ Y+ M N + S ++S+C GLL++ G Q+ G V+ G S +
Sbjct: 139 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLESKL 195
Query: 150 FVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR 209
VE +LI+ G V+ A ++FD M +R +SWNSI A Y
Sbjct: 196 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY------------------- 236
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
AQ G +++ +F MRR E K GR IH
Sbjct: 237 ------------AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 284
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
+V + V + N L+ MYA G +A VF +MP + +SW S++ +F
Sbjct: 285 G-----LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
G +ALGL +M+S G V + +T L AC F ++G RI + G+
Sbjct: 340 DGRSLDALGLLCSMISSGKSV-----NYVTFTSALAACFTPDFFEKG-RILHGLVVVSGL 393
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+V + + G + E+ ++ MP + + W AL+GG
Sbjct: 394 FYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 437
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 166/414 (40%), Gaps = 62/414 (14%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH VV G + LL Y + + A+ +F + WN ++ +
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++ M+S+ N T++ L+AC +G +HG+V+V G N +
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----N 210
L++ Y G + ++R V M +R VV+WN+++ GY D D A F M + N
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 462
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
++ ++++ C G L+ G+ +H
Sbjct: 463 YITVVSVLSACLLPGDL----------------------------------LERGKPLHA 488
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
Y+ + A + V+ N+LI MYA CG + + +F + R+ ++W +M+ A A
Sbjct: 489 YI---VSAGFESDEHVK--NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 543
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G G+E L L M S GV D + L A ++EG+++ +
Sbjct: 544 GHGEEVLKLVSKMRS-----FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG-----LAVK 593
Query: 391 PRIEH----YGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL--WGALLGGCQIH 438
EH + D+ S+ G + E +++ +P N +L W L+ H
Sbjct: 594 LGFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPSWNILISALGRH 644
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 220/492 (44%), Gaps = 50/492 (10%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ ++L C ++++L +H V L K + L++ Y+ ++ A +F ++
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
W +I GY ++E R M PN T + L+S C + +G+
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKC 340
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+HG + + S++ +ET+LI+ YA C
Sbjct: 341 LHGWAVRQQVYSDIIIETSLISMYA-------------------------------KCKR 369
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
D RVF + W+ +IAGC Q AL LF MRR VE
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT----K 311
DL+ IH Y+ + S+ L+H+Y+ CG + A+++F K
Sbjct: 430 YAALADLRQAMNIHCYL-----TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
+ V W ++I + G G AL +F MV G V P+ IT L AC H+G
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG-----VTPNEITFTSALNACSHSG 539
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
V+EG +F M + R HY C+VDLL RAG LDEA+ LI +P +P +WGAL
Sbjct: 540 LVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGAL 599
Query: 432 LGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMG 491
L C H+N +L + KL EL+ + Y VLL+NIYA RW+D+ VR M +G
Sbjct: 600 LAACVTHENVQLGEMAANKLF-ELEPENTGNY-VLLANIYAALGRWKDMEKVRSMMENVG 657
Query: 492 VKKPPGQSWIQI 503
++K PG S I+I
Sbjct: 658 LRKKPGHSTIEI 669
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 164/363 (45%), Gaps = 44/363 (12%)
Query: 17 QHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
Q + + +I +H V+ G +I++ L Y + +A KLF +
Sbjct: 19 QSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGHITYARKLFEEMPQ 77
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVS--TEAEPNGFTYSFLLSACVRGGLLREGE 134
S +N +IR Y R ++ + +MVS + P+G+TY F+ A ++ G
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
VHG +L + + +V+ N++LA Y++ G
Sbjct: 138 VVHGRILRSWFGRDKYVQ-------------------------------NALLAMYMNFG 166
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
+ AR VFD M R+V+SW TMI+G + G AL +F M V+
Sbjct: 167 KVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP 226
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
DL++GR +H V+++ + + + NAL++MY CG + +A VF +M +
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKRLG-----DKIEVKNALVNMYLKCGRMDEARFVFDRMER 281
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R ++WT MI + + G + AL L + M +GVRP+A+T+ ++ C A V+
Sbjct: 282 RDVITWTCMINGYTEDGDVENALELCRLM-----QFEGVRPNAVTIASLVSVCGDALKVN 336
Query: 375 EGR 377
+G+
Sbjct: 337 DGK 339
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 255/519 (49%), Gaps = 47/519 (9%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ TLL L Q+H++V+ GL + I ++S Y + A ++F +
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 79 TTV-WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ WN +I G+++ + E + QM E + +TY+ LLSAC G+ +H
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLH 328
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS--CGD 195
G+V+ KG +EQ + N++++ Y+ G
Sbjct: 329 GMVIKKG--------------------LEQVTS-----------ATNALISMYIQFPTGT 357
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
+ A +F+ + ++++SW ++I G AQKG + A+ F +R + ++
Sbjct: 358 MEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRS 417
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L+LG+ IH + N+ S +LI MY+ CG+I A + F ++ +
Sbjct: 418 CSDLATLQLGQQIHALATKSGFVSNEFVIS-----SLIVMYSKCGIIESARKCFQQISSK 472
Query: 316 -STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
STV+W +MI+ +A+ GLG+ +L LF M + V+ D +T +L AC H G +
Sbjct: 473 HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQN-----VKLDHVTFTAILTACSHTGLIQ 527
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
EG + M + I PR+EHY VDLL RAG +++A LIE+MPL P+ + LG
Sbjct: 528 EGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGV 587
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C+ E+A+ V L+ E++ + Y V LS++Y+ K+W++ +V++ M E GVKK
Sbjct: 588 CRACGEIEMATQVANHLL-EIEPEDHFTY-VSLSHMYSDLKKWEEKASVKKMMKERGVKK 645
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
PG SWI+I V F A D ++ IY ++ ++ ++
Sbjct: 646 VPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQE 684
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 123/240 (51%), Gaps = 13/240 (5%)
Query: 12 RRSIQQHVFT---LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYI--ASDQ 63
R ++ ++T LL +C+ ++ I +H V+ GL Q T+ L+S YI +
Sbjct: 298 RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGT 357
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSA 123
++ A LF ++ + WN II G+A+ +V+ + + S+E + + + +S LL +
Sbjct: 358 MEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRS 417
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR-SVVS 182
C L+ G+Q+H + G+ SN FV ++LI Y+ G +E AR F + + S V+
Sbjct: 418 CSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVA 477
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMR 238
WN+++ GY G + +F +M +NV V++T ++ C+ G ++ L L M
Sbjct: 478 WNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 170/420 (40%), Gaps = 67/420 (15%)
Query: 29 IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRG 88
Q L H + G + ++L YI L +A+ LF + + WN +I G
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 89 YA---RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGY 145
Y + W C ++ + ++ +G+++S LL GEQVHG+V+ GY
Sbjct: 76 YTSCGKLEDAWCLFTCMKR---SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY 132
Query: 146 CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDE 205
NV+V ++L++ YA VE A F + + + VSWN+++AG+V D A +
Sbjct: 133 ECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGL 192
Query: 206 MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR---ARVEXXXXXXXXXXXXXXXXGDL 262
M ++ V TM AG +F + + A+V L
Sbjct: 193 MEMKAAV---TMDAGTFAPLLTLLDDPMFCNLLKQVHAKV-------------------L 230
Query: 263 KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM-PQRSTVSWT 321
KLG Q + + NA+I YA CG + DA +VF + + +SW
Sbjct: 231 KLGL----------------QHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWN 274
Query: 322 SMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
SMI F+K L + A LF M V D T +L AC E +IF
Sbjct: 275 SMIAGFSKHELKESAFELFIQMQR-----HWVETDIYTYTGLLSACS-----GEEHQIFG 324
Query: 382 SMNRTWGISPRIEHYGCMVDLLSR------AGFLDEAHGLIENMPLKPNDAL-WGALLGG 434
I +E + L G +++A L E+ LK D + W +++ G
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFES--LKSKDLISWNSIITG 382
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 10/261 (3%)
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
N IL Y+ G A +FDEMP R+ VSW TMI+G G+ + A LF M+R+ +
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
LG +H +V + + +V + ++L+ MYA C +
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVH-----GLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
DA++ F ++ + ++VSW ++I F + K A L M A V DA T +
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA----VTMDAGTFAPL 209
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L F + +++ A + + G+ I M+ + G + +A + + +
Sbjct: 210 LTLLDDPMFCNLLKQVHAKVLKL-GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 424 NDALWGALLGGCQIHKNSELA 444
+ W +++ G H+ E A
Sbjct: 269 DLISWNSMIAGFSKHELKESA 289
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Query: 286 VRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVS 345
+ ++N ++ Y G +G A +F +MP+R +VSW +MI + G ++A LF M
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKR 94
Query: 346 DGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSR 405
G+ VDG + +L D G ++ + + G + +VD+ ++
Sbjct: 95 SGSDVDGY-----SFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGSSLVDMYAK 148
Query: 406 AGFLDEAHGLIENMPLKPNDALWGALLGGC----QIHKNSELASVVEPKLVAELDTDGAA 461
+++A + + +PN W AL+ G I L ++E K +D A
Sbjct: 149 CERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFA 207
Query: 462 GYLVLLSN 469
L LL +
Sbjct: 208 PLLTLLDD 215
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 152/528 (28%), Positives = 254/528 (48%), Gaps = 47/528 (8%)
Query: 9 ASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
A+G +S + + +++ + + NL+ ++H+ V+ +G + L+ Y +
Sbjct: 379 AAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTC 438
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
+ + F + + W +I GYA++ +++E +R + E + +
Sbjct: 439 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME---------IDEMI 489
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
G +LR + +++VK I+ + R G+ D + Q N
Sbjct: 490 LGSILRASSVLKSMLIVKE-----------IHCHILRKGL------LDTVIQ------NE 526
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
++ Y C + A RVF+ + ++VVSWT+MI+ A G +A+ LF M +
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
L GR IH Y+ ++ + S+ + A++ MYA CG + A
Sbjct: 587 SVALLCILSAAASLSALNKGREIHCYLLRKGFC---LEGSIAV--AVVDMYACCGDLQSA 641
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
VF ++ ++ + +TSMI A+ G GK A+ LF M + V PD I+ + +L
Sbjct: 642 KAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN-----VSPDHISFLALLY 696
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC HAG +DEGR M + + P EHY C+VD+L RA + EA ++ M +P
Sbjct: 697 ACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA 756
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQ 485
+W ALL C+ H E+ + +L+ EL+ G LVL+SN++A RW DV VR
Sbjct: 757 EVWCALLAACRSHSEKEIGEIAAQRLL-ELEPKN-PGNLVLVSNVFAEQGRWNDVEKVRA 814
Query: 486 KMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
KM G++K PG SWI+++G VH F A D +H S IYE LSE+ ++
Sbjct: 815 KMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRK 862
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 142/336 (42%), Gaps = 41/336 (12%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
LL++C ++++ ++HS +V G I+ L+S Y +D L A +LF
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 78 STTV-WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
V WN I+ Y+ S +++E +R+M T PN +T L+AC + G+++
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 306
Query: 137 HGIVLVKG-YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
H VL + S ++V LI Y G + QA + M VV+WNS++ GYV
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV---- 362
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
Q K+AL F +M A +
Sbjct: 363 ---------------------------QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
+L G +H Y V ++ ++++ N LI MY+ C + + F +M +
Sbjct: 396 SGRLSNLLAGMELHAY-----VIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
+SWT++I +A+ EAL LF+ + +D
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEID 486
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 138/332 (41%), Gaps = 47/332 (14%)
Query: 34 QIHSQVVLNGLSQKTNIIT-KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
Q+HS++ S + + + KL+ Y L A K+F + + + WN +I Y +
Sbjct: 101 QLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSN 160
Query: 93 HTPWKSVECYRQMVSTEAEPNGFT-YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
P ++ Y M E P G + + LL AC + +R G ++H +++ GY S F+
Sbjct: 161 GEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQR-SVVSWNSILAGYVSCGDFDGARRVFDEM---- 206
L++ YA + AR +FDG ++ V WNSIL+ Y + G +F EM
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279
Query: 207 PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGR 266
P N + + + C KLG+
Sbjct: 280 PAPNSYTIVSALTAC-----------------------------------DGFSYAKLGK 304
Query: 267 WIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
IH ++ + + + NALI MY CG + A ++ +M V+W S+I
Sbjct: 305 EIH----ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
+ + + KEAL F M++ G D V +I
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 392
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 12/246 (4%)
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y CG D A +VFDEMP R +W TMI G AL+L+ MR V
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
D++ G +H ++ + + + NAL+ MYA + A ++F
Sbjct: 186 PALLKACAKLRDIRSGSELH-----SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 310 TKMPQR-STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
++ V W S++ +++ G E L LF+ M + G P++ T++ L AC
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM-----HMTGPAPNSYTIVSALTACD 295
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
+ G+ I AS+ ++ S + ++ + +R G + +A ++ M + W
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTW 354
Query: 429 GALLGG 434
+L+ G
Sbjct: 355 NSLIKG 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 284 PSVRLN---NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF 340
PS L+ L+ MY CG + DA +VF +MP R+ +W +MI A+ G AL L+
Sbjct: 111 PSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALY 170
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
M V+GV + +L AC + G + + + + G +V
Sbjct: 171 WNM-----RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK-LGYHSTGFIVNALV 224
Query: 401 DLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ ++ L A L + K + LW ++L
Sbjct: 225 SMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 256/548 (46%), Gaps = 42/548 (7%)
Query: 2 LIERFVPASGR---RSIQQHVFT---LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIIT 52
L E + A R + I+ FT +L++C ++ +H + ++ +
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183
Query: 53 KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEP 112
L+S Y + A +LF + WN +I YA ++ E + +M + E
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 113 NGFTYSFLLSACVRGGLLREGEQVHGIVLV---KGYCSNVFVETNLINFYAGR--GGVEQ 167
+ T++ + GG L+ G V + L+ + + +++ +I A G +
Sbjct: 244 SVITWNI-----ISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRL 298
Query: 168 ARHV--------FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIA 219
+ + +DG+ N+++ Y C D A VF + ++ +W ++I+
Sbjct: 299 GKEIHGLAIHSSYDGIDNVR----NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIIS 354
Query: 220 GCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
G AQ + ++A L EM A + +L+ G+ H Y+ +R +
Sbjct: 355 GYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFK 414
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
+ L N+L+ +YA G I A QV M +R V++TS+I + QG G AL L
Sbjct: 415 DYTM----LWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 340 FKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCM 399
FK M G ++PD +T++ VL AC H+ V EG R+F M +GI P ++H+ CM
Sbjct: 471 FKEMTRSG-----IKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525
Query: 400 VDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDG 459
VDL RAGFL +A +I NMP KP+ A W LL C IH N+++ KL+ E+ +
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLL-EMKPEN 584
Query: 460 AAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKH 519
GY VL++N+YA A W + VR M ++GVKK PG +WI + F GD +
Sbjct: 585 -PGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPE 643
Query: 520 SYFIYEIL 527
+ Y +L
Sbjct: 644 ACNTYPLL 651
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 193/421 (45%), Gaps = 18/421 (4%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+LL +C +++ +Q+H+ + +G+ + ++ KL++FY A + A + D
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDIL 107
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I YA++ + + Y++MVS P+ FTY +L AC + G VH
Sbjct: 108 HPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVH 167
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G + V Y S+++V LI+ Y + AR +FD M +R VSWN+++ Y S G +
Sbjct: 168 GSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 198 GARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
A +FD+M +V++W + GC Q G AL L MR
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
G ++LG+ IH + + + N LI MY+ C + A VF +
Sbjct: 288 KACSLIGAIRLGKEIH-----GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE 342
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+ S +W S+I +A+ +EA L + M+ V G +P++ITL +L C +
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREML-----VAGFQPNSITLASILPLCARIANL 397
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
G+ + R + +VD+ +++G + A + + M K ++ + +L+
Sbjct: 398 QHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLID 456
Query: 434 G 434
G
Sbjct: 457 G 457
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 240/499 (48%), Gaps = 21/499 (4%)
Query: 20 FTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
F L++ N+I +L Q+H++++ +G ++ +LL + ++ +I
Sbjct: 26 FKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYC 85
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
N + + Y S +P +++ Y ++ P+ +T+ L+S + + G+ HG
Sbjct: 86 A--NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQ 143
Query: 140 VLVKGYCSNVF-VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+ G C V V+ +L++ Y G ++ A+ +F + +R +VSWNSI+AG V GD
Sbjct: 144 AIKHG-CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLA 202
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
A ++FDEMP +N++SW MI+ ++SLF EM RA +
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
LK GR +H + R SV ++ ALI MY C +G A ++F + R+ V
Sbjct: 263 SARLKEGRSVH-----ASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV 317
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W MI+A G + L LF+ M++ +RPD +T + VLC C AG V +G+
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAMIN-----GMLRPDEVTFVGVLCGCARAGLVSQGQS 372
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALLGGC 435
++ M + I P H CM +L S AGF +EA ++N+P + P W LL
Sbjct: 373 YYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSS 432
Query: 436 QIHKNSELASVVEPKLVAELDTDGAA-GYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
+ N L + L+ +TD Y LL NIY+ RW+DV VR+ + E + +
Sbjct: 433 RFTGNPTLGESIAKSLI---ETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGR 489
Query: 495 PPGQSWIQINGVVHDFVAG 513
PG + + +VH G
Sbjct: 490 IPGCGLVDLKEIVHGLRLG 508
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 211/441 (47%), Gaps = 43/441 (9%)
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
S ++ ++FS+I PS + WN ++ GY+ +++ +RQM +P+ T S +
Sbjct: 363 SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVI 422
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
LS+C R L G+Q+HG+V+ R + + H+ G+
Sbjct: 423 LSSCARLRFLEGGKQIHGVVI--------------------RTEISKNSHIVSGL----- 457
Query: 181 VSWNSILAGYVSCGDFDGARRVFDE-MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
+A Y C + + +FD+ + ++ W +MI+G +AL LF M +
Sbjct: 458 ------IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
V +L +H +V ++ + AL MY C
Sbjct: 512 TAVLCPNETSFATVLSSCS----RLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKC 567
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G I A Q F + +++TV W MI + G G EA+GL++ M+S G +PD IT
Sbjct: 568 GEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-----KPDGIT 622
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+ VL AC H+G V+ G I +SM R GI P ++HY C+VD L RAG L++A L E
Sbjct: 623 FVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEAT 682
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
P K + LW LL C++H + LA V KL+ LD +A Y VLLSN Y+ ++W D
Sbjct: 683 PYKSSSVLWEILLSSCRVHGDVSLARRVAEKLM-RLDPQSSAAY-VLLSNTYSSLRQWDD 740
Query: 480 VIAVRQKMIEMGVKKPPGQSW 500
A++ M + V K PGQSW
Sbjct: 741 SAALQGLMNKNRVHKTPGQSW 761
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 170/392 (43%), Gaps = 53/392 (13%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
L+F L A ++F + WN++I R K++ Y++MV P+
Sbjct: 78 FLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPS 137
Query: 114 GFTYSFLLSAC--VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGG-VEQARH 170
FT + +LSAC V G+ G + HG+ + G N+FV L++ YA G V+
Sbjct: 138 RFTLASVLSACSKVLDGVF--GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGR 226
VF+ + Q + VS+ +++ G A ++F M + V V + +++ A +
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 227 CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
C ++G +LG+ IH + R +
Sbjct: 256 CDSLSEIYGN--------------------------ELGKQIHC-----LALRLGFGGDL 284
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
LNN+L+ +YA + A +F +MP+ + VSW MI+ F ++ +++ F T + D
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVE-FLTRMRD 343
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
G +P+ +T I VL AC +G V+ GRRIF+S+ + P + + M+ S
Sbjct: 344 S----GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNY 394
Query: 407 GFLDEAHGLIENMP---LKPNDALWGALLGGC 435
+EA M LKP+ +L C
Sbjct: 395 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 6/222 (2%)
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G+ +HG ++ G S+ ++ L++ Y G + AR VFD M R V SWN+ L
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
GD A VFD MP R+VVSW MI+ +KG ++AL ++ M
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD-AYQVFTK 311
D G H + + ++ + NAL+ MYA CG I D +VF
Sbjct: 145 LSACSKVLDGVFGMRCHG-----VAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
+ Q + VS+T++I A++ EA+ +F+ M G VD V
Sbjct: 200 LSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 29/203 (14%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
T+L SC+ + +L+ Q H VV +G + + T L Y ++ A + F +
Sbjct: 524 TVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRK 583
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG---- 133
+T +WN +I GY + ++V YR+M+S+ +P+G T+ +L+AC GL+ G
Sbjct: 584 NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEIL 643
Query: 134 ---EQVHGIVLVKGYCSNVFVETNLINFYA-----GRGG-VEQARHVFDGMGQR-SVVSW 183
+++HGI E L ++ GR G +E A + + + S V W
Sbjct: 644 SSMQRIHGI------------EPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLW 691
Query: 184 NSILAGYVSCGDFDGARRVFDEM 206
+L+ GD ARRV +++
Sbjct: 692 EILLSSCRVHGDVSLARRVAEKL 714
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 290 NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
NA + G +G+A +VF MP+R VSW +MI ++G ++AL ++K MV
Sbjct: 76 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV----- 130
Query: 350 VDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
DG P TL VL AC G R +T G+ I ++ + ++ GF+
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKT-GLDKNIFVGNALLSMYAKCGFI 189
Query: 410 -DEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
D + E++ +PN+ + A++GG +N L +V +L+ E G V LS
Sbjct: 190 VDYGVRVFESLS-QPNEVSYTAVIGGLA-RENKVLEAVQMFRLMCE---KGVQVDSVCLS 244
Query: 469 NIYAFA 474
NI + +
Sbjct: 245 NILSIS 250
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 240/479 (50%), Gaps = 55/479 (11%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID-- 75
+LL++C +++ + +++H + L I +KL+ Y + + AH++F +
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ S WN +I GYA ++ Y QM +P+ FT+ +L AC G ++ GE
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H ++ +G+ +V+V N+++ Y CGD
Sbjct: 217 IHRDLVKEGFGYDVYV-------------------------------LNALVVMYAKCGD 245
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
AR VFD +P ++ VSW +M+ G G +AL +F M + +E
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLAR 305
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
K GR +H +V R + + + NALI +Y+ G +G A +F +M +R
Sbjct: 306 VL---SFKHGRQLHGWV-----IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLER 357
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
TVSW ++I A +K G L F+ M A +PD IT + VL C + G V++
Sbjct: 358 DTVSWNAIISAHSKNSNG---LKYFEQMHRANA-----KPDGITFVSVLSLCANTGMVED 409
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI-ENMPLKPNDALWGALLGG 434
G R+F+ M++ +GI P++EHY CMV+L RAG ++EA+ +I + M L+ +WGALL
Sbjct: 410 GERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYA 469
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
C +H N+++ V +L EL+ D + +L+ IY+ AKR +DV VRQ M++ G++
Sbjct: 470 CYLHGNTDIGEVAAQRLF-ELEPDNEHNFELLI-RIYSKAKRAEDVERVRQMMVDRGLE 526
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 134/434 (30%), Positives = 208/434 (47%), Gaps = 45/434 (10%)
Query: 109 EAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQA 168
+ EP TY+ LL C + +G+++H + V G+ N +++ L+ YA
Sbjct: 105 QVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYA-------- 154
Query: 169 RHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK 228
GD A +F + IR+++ W MI+G QKG +
Sbjct: 155 -----------------------LSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQ 191
Query: 229 QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRL 288
+ L ++ +MR+ R+ L+ G+ H + +R + N + +
Sbjct: 192 EGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSN-----IIV 246
Query: 289 NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
++AL+ MY C D ++VF ++ R+ ++WTS+I + G E L F+ M +G
Sbjct: 247 DSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC 306
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
RP+ +T +VVL AC H G VD+G F SM R +GI P +HY MVD L RAG
Sbjct: 307 -----RPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGR 361
Query: 409 LDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
L EA+ + P K + +WG+LLG C+IH N +L + K + ELD Y V+ +
Sbjct: 362 LQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFL-ELDPTNGGNY-VVFA 419
Query: 469 NIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILS 528
N YA + VR+KM GVKK PG S I++ G VH F+ D +H+ S IY+ +
Sbjct: 420 NGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVH 479
Query: 529 EIIKQSHVDSYEPD 542
E+ Y PD
Sbjct: 480 EMTSFFMDIDYYPD 493
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LLQ C + + IH+Q+ + G + + KLL Y S LQ A LF ++
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRD 173
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN +I GY + + + Y M P+ +T++ + AC L G++ H
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+++ + SN+ V++ L++ Y VFD + R+V++W S+++GY G
Sbjct: 234 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSE 293
Query: 199 ARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
+ F++M N V++ ++ C G + F M+R
Sbjct: 294 VLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKR 338
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 234/504 (46%), Gaps = 46/504 (9%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H+ + G + T + L+ Y+ ++ A KLF + P+ W +I GY
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 95 PWKSVECYRQMVSTE-AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P ++ +++M PN +T++ + AC R G+ +H + + G N+ V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI--RNV 211
+L++ Y C D + ARRVFD M RNV
Sbjct: 171 SLVDMYG-------------------------------KCNDVETARRVFDSMIGYGRNV 199
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
VSWT+MI AQ R +A+ LF A LGR
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSS---LGRLQWGK 256
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
V +V R + + + +L+ MYA CG + A ++F ++ S +S+TSMIMA AK G
Sbjct: 257 VAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHG 316
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
LG+ A+ LF MV+ + P+ +TL+ VL AC H+G V+EG + M +G+ P
Sbjct: 317 LGEAAVKLFDEMVAGR-----INPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVP 371
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA--LWGALLGGCQIHKNSELASVVEP 449
HY C+VD+L R G +DEA+ L + + + LWGALL ++H E+ S
Sbjct: 372 DSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASK 431
Query: 450 KLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHD 509
+L+ + + + Y+ LSN YA + W+D ++R +M G K SWI+ V+
Sbjct: 432 RLI-QSNQQVTSAYIA-LSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYV 489
Query: 510 FVAGDMTHKHSYFIYEILSEIIKQ 533
F AGD++ S I L ++ K+
Sbjct: 490 FHAGDLSCDESGEIERFLKDLEKR 513
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 239/486 (49%), Gaps = 47/486 (9%)
Query: 21 TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
TL+ +C + L Q H +V +G+ + ++T LL Y+ + +A ++F+ +
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV 306
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+W +I GY + + +++ +++M E +PN T + +LS C L G VH
Sbjct: 307 DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVH 366
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G+ + G +TN+ N +++ Y C
Sbjct: 367 GLSIKVG-----IWDTNVAN---------------------------ALVHMYAKCYQNR 394
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A+ VF+ +++V+W ++I+G +Q G +AL LF M V
Sbjct: 395 DAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACA 454
Query: 258 XXGDLKLGRWIHWY-VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
G L +G +H Y V+ +A + SV + AL+ YA CG A +F + +++
Sbjct: 455 SLGSLAVGSSLHAYSVKLGFLASS----SVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
T++W++MI + KQG +L LF+ M+ +P+ T +L AC H G V+EG
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ-----KPNESTFTSILSACGHTGMVNEG 565
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
++ F+SM + + +P +HY CMVD+L+RAG L++A +IE MP++P+ +GA L GC
Sbjct: 566 KKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCG 625
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
+H +L +V K++ +L D A+ Y VL+SN+YA RW VR M + G+ K
Sbjct: 626 MHSRFDLGEIVIKKML-DLHPDDAS-YYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIA 683
Query: 497 GQSWIQ 502
G S ++
Sbjct: 684 GHSTME 689
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 155/360 (43%), Gaps = 42/360 (11%)
Query: 20 FTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
F LL C NI +L Q H + NGL +I TKL+S Y + A +F I P
Sbjct: 48 FLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
+W ++R Y + + V+ Y ++ + +S L AC L G+++H
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH-C 166
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
LVK + V T L++ YA CG+ A
Sbjct: 167 QLVKVPSFDNVVLTGLLDMYA-------------------------------KCGEIKSA 195
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
+VF+++ +RNVV WT+MIAG + C++ L LF MR V
Sbjct: 196 HKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKL 255
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
L G+W H + ++ + S L +L+ MY CG I +A +VF + V
Sbjct: 256 SALHQGKWFHG-----CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVM 310
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
WT+MI+ + G EAL LF+ M GV+ ++P+ +T+ VL C ++ GR +
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKM----KGVE-IKPNCVTIASVLSGCGLIENLELGRSV 365
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 184/425 (43%), Gaps = 66/425 (15%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L++C +Q+L +IH Q+V S ++T LL Y +++ AHK+F+ I +
Sbjct: 149 LKACTELQDLDNGKKIHCQLV-KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNV 207
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
W +I GY ++ + + + +M N +TY L+ AC + L +G+ HG
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGC 267
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
++ G + + T+L++ Y G + AR VF+ +V W +++ GY G + A
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 200 RRVFDEMP---IR-NVVSWTTMIAGCA-----QKGRCKQALSLFGEMRRARVEXXXXXXX 250
+F +M I+ N V+ ++++GC + GR LS
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLS------------------ 369
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
+K+G W + NAL+HMYA C DA VF
Sbjct: 370 -----------IKVGIW-----------------DTNVANALVHMYAKCYQNRDAKYVFE 401
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
++ V+W S+I F++ G EAL LF M S + V P+ +T+ + AC
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS-----ESVTPNGVTVASLFSACASL 456
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYG-CMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G + G + A + ++ H G ++D ++ G A + + + K N W
Sbjct: 457 GSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK-NTITWS 515
Query: 430 ALLGG 434
A++GG
Sbjct: 516 AMIGG 520
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 14/232 (6%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQK-----TNIITKLLSFYIASDQLQHAHKLFST 73
+ ++L C I+NL S ++GLS K TN+ L+ Y Q + A +F
Sbjct: 346 IASVLSGCGLIENLELGRS---VHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
WN II G++++ + +++ + +M S PNG T + L SAC G L G
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 134 EQVHGIVLVKGY--CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
+H + G+ S+V V T L++FYA G + AR +FD + +++ ++W++++ GY
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYG 522
Query: 192 SCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
GD G+ +F+EM + N ++T++++ C G + F M +
Sbjct: 523 KQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYK 574
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 25/204 (12%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGL--SQKTNIITKLLSFYIASDQLQHAHKLFST 73
V +L +C ++ +L +H+ V G S ++ T LL FY Q A +F T
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT 505
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
I+ +T W+ +I GY + S+E + +M+ + +PN T++ +LSAC G++ EG
Sbjct: 506 IEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEG 565
Query: 134 EQVHGIVLVKGYCSNVFVETN----------LINFYAGRGGVEQARHVFDGMG-QRSVVS 182
K Y S+++ + N +++ A G +EQA + + M Q V
Sbjct: 566 ---------KKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRC 616
Query: 183 WNSILAGYVSCGDFDGARRVFDEM 206
+ + L G FD V +M
Sbjct: 617 FGAFLHGCGMHSRFDLGEIVIKKM 640
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 193/364 (53%), Gaps = 16/364 (4%)
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
V + N I+ + G+ A++V +NV++W MI G + + ++AL M
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 240 -ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
++ GDL +W+H + + N L++AL+ +YA
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELN-----AILSSALVDVYAK 212
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
CG IG + +VF + + W +MI FA GL EA+ +F M ++ V PD+I
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEH-----VSPDSI 267
Query: 359 TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
T + +L C H G ++EG+ F M+R + I P++EHYG MVDLL RAG + EA+ LIE+
Sbjct: 268 TFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIES 327
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQ 478
MP++P+ +W +LL + +KN EL + L + +G VLLSNIY+ K+W+
Sbjct: 328 MPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNL-----SKAKSGDYVLLSNIYSSTKKWE 382
Query: 479 DVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDS 538
VR+ M + G++K G+SW++ G++H F AGD +H + IY++L +I+++
Sbjct: 383 SAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQG 442
Query: 539 YEPD 542
+ D
Sbjct: 443 FVSD 446
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 45/264 (17%)
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACV 125
A K+ + + WN +I GY R+ ++++ + M+S T+ +PN F+++ L+AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
R G L + VH +++ G N + + L++ YA G + +R VF + + V WN+
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
++ G+ + G A RVF EM +V +++ ++ C+ G ++ FG M R
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR-- 294
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
R QP + A++ + G
Sbjct: 295 -------------------------------------RFSIQPKLEHYGAMVDLLGRAGR 317
Query: 302 IGDAYQVFTKMP-QRSTVSWTSMI 324
+ +AY++ MP + V W S++
Sbjct: 318 VKEAYELIESMPIEPDVVIWRSLL 341
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+HS ++ +G+ + + L+ Y + + ++F ++ ++WN +I G+A
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+++ + +M + P+ T+ LL+ C GLL EG++ G++ +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 155 LINFYAGRGG-VEQARHVFDGMG-QRSVVSWNSILAG 189
+ GR G V++A + + M + VV W S+L+
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 225/488 (46%), Gaps = 44/488 (9%)
Query: 43 GLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECY 102
G + + +L+ Y+ ++ A LF + W ++ G+A++ K+VE Y
Sbjct: 146 GYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFY 205
Query: 103 RQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGR 162
R+M + + LL A G + G VHG + G NV VET+L++ YA
Sbjct: 206 REMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKV 265
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCA 222
G +E A RVF M + VSW ++I+G A
Sbjct: 266 GFIEVAS-------------------------------RVFSRMMFKTAVSWGSLISGFA 294
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
Q G +A EM+ + G LK GR +H Y+ +R V
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT 354
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
AL+ MY+ CG + + ++F + ++ V W +MI + G G+E + LF
Sbjct: 355 A------TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
M + PD T +L A H+G V++G+ F+ M + I P +HY C++DL
Sbjct: 409 MTESN-----IEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDL 463
Query: 403 LSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAG 462
L+RAG ++EA +I + L +W ALL GC H+N + + K++ +L+ D + G
Sbjct: 464 LARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKIL-QLNPD-SIG 521
Query: 463 YLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYF 522
L+SN +A A +W++V VR+ M ++K PG S I++NG + F+ D++H Y
Sbjct: 522 IQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYH 581
Query: 523 IYEILSEI 530
+ ++L +
Sbjct: 582 MLQVLRNL 589
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 198/423 (46%), Gaps = 46/423 (10%)
Query: 22 LLQSCNNIQ-NLIQIHSQVVLNG-LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
LQS + ++ ++ QIH+ V+ G L ++I L++ ++ +A K+F +
Sbjct: 22 FLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGV 81
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
+V+N +I Y+R P + + Y QM++ + +P+ T++ + AC+ G +L +GE V
Sbjct: 82 SVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCK 141
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
+ GY ++VFV ++++N Y G +++A +F M +R V+ W
Sbjct: 142 AVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICW---------------- 185
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
TTM+ G AQ G+ +A+ + EM+
Sbjct: 186 ---------------TTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDL 230
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
GD K+GR +H Y+ + + N V + +L+ MYA G I A +VF++M ++ VS
Sbjct: 231 GDTKMGRSVHGYLYRTGLPMN-----VVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVS 285
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
W S+I FA+ GL +A M S G +PD +TL+ VL AC G + GR +
Sbjct: 286 WGSLISGFAQNGLANKAFEAVVEMQS-----LGFQPDLVTLVGVLVACSQVGSLKTGRLV 340
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK 439
+ + + R+ M D+ S+ G L + + E++ K + W ++ IH
Sbjct: 341 HCYILKRH-VLDRVTATALM-DMYSKCGALSSSREIFEHVGRK-DLVCWNTMISCYGIHG 397
Query: 440 NSE 442
N +
Sbjct: 398 NGQ 400
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H + GL + T L+ Y ++ A ++FS + + W +I G+A++
Sbjct: 239 VHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGL 298
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
K+ E +M S +P+ T +L AC + G L+ G VH +L K + + T
Sbjct: 299 ANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYIL-KRHVLDRVTATA 357
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV--- 211
L++ Y+ G + +R +F+ +G++ +V WN++++ Y G+ +F +M N+
Sbjct: 358 LMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPD 417
Query: 212 -VSWTTMIAGCAQKGRCKQALSLFGEM 237
++ ++++ + G +Q F M
Sbjct: 418 HATFASLLSALSHSGLVEQGQHWFSVM 444
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/519 (26%), Positives = 241/519 (46%), Gaps = 50/519 (9%)
Query: 22 LLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L+++C +I+ + +++ ++ NG + ++ ++L ++ + A +LF I +
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERN 188
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
+ II G+ ++ E ++ M ++ T++ +L A G + G+Q+H
Sbjct: 189 LYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHV 248
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
L G N FV LI+ Y+ CGD +
Sbjct: 249 CALKLGVVDNTFVSCGLIDMYS-------------------------------KCGDIED 277
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
AR F+ MP + V+W +IAG A G ++AL L +MR + V
Sbjct: 278 ARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTK 337
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
L+L + H + RN + + N AL+ Y+ G + A VF K+P+++ +
Sbjct: 338 LAKLELTKQAH-----ASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNII 392
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
SW +++ +A G G +A+ LF+ M++ V P+ +T + VL AC ++G ++G
Sbjct: 393 SWNALMGGYANHGRGTDAVKLFEKMIAAN-----VAPNHVTFLAVLSACAYSGLSEQGWE 447
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
IF SM+ GI PR HY CM++LL R G LDEA I PLK +W ALL C++
Sbjct: 448 IFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQ 507
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
+N EL VV KL + + Y+V+ N+Y + + V + + G+ P
Sbjct: 508 ENLELGRVVAEKLYG-MGPEKLGNYVVMY-NMYNSMGKTAEAAGVLETLESKGLSMMPAC 565
Query: 499 SWIQINGVVHDFVAGDMTHKHSYF----IYEILSEIIKQ 533
+W+++ H F++GD ++ IY+ + E++++
Sbjct: 566 TWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEE 604
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 156/353 (44%), Gaps = 43/353 (12%)
Query: 116 TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
TY L+ AC+R +R ++V+G ++ G+ ++ ++ + G + AR +FD +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
+R++ S+ SI++G+V+ G++ A +F M W + + C F
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMM-------WEEL-SDCETH--------TFA 228
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
M RA G + +G+ +H + V N ++ LI M
Sbjct: 229 VMLRA---------------SAGLGSIYVGKQLHVCALKLGVVDN-----TFVSCGLIDM 268
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y+ CG I DA F MP+++TV+W ++I +A G +EAL L M G +
Sbjct: 269 YSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSI----- 323
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
D TL +++ ++ ++ AS+ R G I +VD S+ G +D A +
Sbjct: 324 DQFTLSIMIRISTKLAKLELTKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYV 382
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
+ +P K N W AL+GG H A + K++A +L +LS
Sbjct: 383 FDKLPRK-NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLS 434
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 236/507 (46%), Gaps = 49/507 (9%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIA 60
+L+ R + + R +++ SC+ Q+H + G + T + ++ Y +
Sbjct: 276 LLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSS 335
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
+ AHK+F +++ WN +I Y ++ ++ Y++M +P+ FT+ L
Sbjct: 336 FEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSL 395
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
L+ + +L E V ++ G S + + LI+ Y+ G +E+A D + +RS+
Sbjct: 396 LATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA----DLLFERSL 448
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
+N++SW +I+G G + L F + +
Sbjct: 449 R---------------------------KNLISWNAIISGFYHNGFPFEGLERFSCLLES 481
Query: 241 --RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
R+ L LG H YV R+ Q + NALI+MY+
Sbjct: 482 EVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYV-----LRHGQFKETLIGNALINMYSQ 536
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
CG I ++ +VF +M ++ VSW S+I A+++ G G+ A+ +KTM +G V PDA
Sbjct: 537 CGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGK----VIPDAA 592
Query: 359 TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL--I 416
T VL AC HAG V+EG IF SM G+ ++H+ C+VDLL RAG LDEA L I
Sbjct: 593 TFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKI 652
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKR 476
+ +W AL C H + +L +V KL+ E + D + Y V LSNIYA A
Sbjct: 653 SEKTIGSRVDVWWALFSACAAHGDLKLGKMV-AKLLMEKEKDDPSVY-VQLSNIYAGAGM 710
Query: 477 WQDVIAVRQKMIEMGVKKPPGQSWIQI 503
W++ R+ + +G K G SW+++
Sbjct: 711 WKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 26/312 (8%)
Query: 71 FSTIDNPSTTVWN--HIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSAC--V 125
S I STT+ N + G RS +++ + + T P+ ++ S ++ +
Sbjct: 11 LSAIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHL 70
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
R + G QVH + G + V L++ Y G + + FD + + V SW +
Sbjct: 71 RDTIF--GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTT 128
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVS-WTTMIAGCAQKGRCKQALSLFGEMRRARVEX 244
+L+ GD + A VFD+MP R+ V+ W MI GC + G + ++ LF EM + V
Sbjct: 129 LLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVR- 187
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
G L G+ +H +V + + + NALI MY +C V+ D
Sbjct: 188 HDKFGFATILSMCDYGSLDFGKQVH-----SLVIKAGFFIASSVVNALITMYFNCQVVVD 242
Query: 305 AYQVF--TKMPQRSTVSWTSMIMAFAKQGLGK-EALGLFKTMVSDGAGVDGVRPDAITLI 361
A VF T + R V++ +I A G + E+L +F+ M+ +RP +T +
Sbjct: 243 ACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLE-----ASLRPTDLTFV 295
Query: 362 VVL--CACCHAG 371
V+ C+C G
Sbjct: 296 SVMGSCSCAAMG 307
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 130/336 (38%), Gaps = 48/336 (14%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP--STTVWNHIIRGYAR 91
Q+HS V+ G ++++ L++ Y + A +F D +N +I G A
Sbjct: 210 QVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAG 269
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
+S+ +R+M+ P T+ ++ +C + G QVHG+ + GY V
Sbjct: 270 FKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLV 325
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
+ Y+ A VF+ + ++ +V+WN++++ Y A V+ M I V
Sbjct: 326 SNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
K FG + + DL + +
Sbjct: 386 ----------------KPDEFTFGSLLATSL------------------DLDVLEMV--- 408
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
Q + + + ++NALI Y+ G I A +F + +++ +SW ++I F G
Sbjct: 409 --QACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNG 466
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
E L F ++ + PDA TL +L C
Sbjct: 467 FPFEGLERFSCLLESEV---RILPDAYTLSTLLSIC 499
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 223/491 (45%), Gaps = 43/491 (8%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKL 70
G R+ + V +LL + + Q+H + +GL + + L + Y L+ ++KL
Sbjct: 448 GLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 71 FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLL 130
F I W +I G+ +++ + +M+ P+ T + +L+ C L
Sbjct: 508 FQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSL 567
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
G+++HG L G + + + L+N Y+
Sbjct: 568 PRGKEIHGYTLRAGIDKGMDLGSALVNMYS------------------------------ 597
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
CG AR+V+D +P + VS +++I+G +Q G + LF +M +
Sbjct: 598 -KCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAIS 656
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
+ LG +H Y+ + + +PSV ++L+ MY+ G I D + F+
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLC---TEPSV--GSSLLTMYSKFGSIDDCCKAFS 711
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
++ ++WT++I ++A+ G EAL ++ M G +PD +T + VL AC H
Sbjct: 712 QINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG-----FKPDKVTFVGVLSACSHG 766
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G V+E SM + +GI P HY CMVD L R+G L EA I NM +KP+ +WG
Sbjct: 767 GLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGT 826
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
LL C+IH EL V K + EL+ A Y + LSNI A W +V R+ M
Sbjct: 827 LLAACKIHGEVELGKVAAKKAI-ELEPSDAGAY-ISLSNILAEVGEWDEVEETRKLMKGT 884
Query: 491 GVKKPPGQSWI 501
GV+K PG S +
Sbjct: 885 GVQKEPGWSSV 895
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 183/407 (44%), Gaps = 49/407 (12%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L +C +++ L + ++V+ G ++ + T ++ Y + A ++FS I NP
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNP 314
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
S W ++ GY +S+ + ++E +++M + E N T + ++SAC R ++ E QVH
Sbjct: 315 SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVH 374
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
V G+ + V LI+ Y+ G ++ + VF+ D D
Sbjct: 375 AWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFE---------------------DLD 413
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
+R +N+V+ MI +Q + +A+ LF M + E
Sbjct: 414 DIQR-------QNIVN--VMITSFSQSKKPGKAIRLFTRMLQ---EGLRTDEFSVCSLLS 461
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
L LG+ +H Y + + + + + ++L +Y+ CG + ++Y++F +P +
Sbjct: 462 VLDCLNLGKQVHGYTLKSGLVLD-----LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN 516
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
W SMI F + G +EA+GLF M+ DG PD TL VL C + G+
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTS-----PDESTLAAVLTVCSSHPSLPRGK 571
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP-LKP 423
I R GI ++ +V++ S+ G L A + + +P L P
Sbjct: 572 EIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP 617
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 164/376 (43%), Gaps = 55/376 (14%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
+ LLS+Y S + A KLF TI P N +I GY + +S+ + +M
Sbjct: 86 LTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLG 145
Query: 110 AEPNGFTYSFLLSAC--VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQ 167
E N +Y ++SAC ++ L E H I + GY VE+ LI+ ++ E
Sbjct: 146 FEANEISYGSVISACSALQAPLFSELVCCHTIKM--GYFFYEVVESALIDVFSKNLRFED 203
Query: 168 ARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI----RNVVSWTTMIAGCAQ 223
A VF +V WN+I+AG + ++ +F EM + + ++++++A CA
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 224 KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQ 283
+ + FG++ +ARV +K G
Sbjct: 264 LEKLR-----FGKVVQARV-------------------IKCG-----------------A 282
Query: 284 PSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
V + A++ +YA CG + +A +VF+++P S VSWT M+ + K AL +FK M
Sbjct: 283 EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
G ++ T+ V+ AC V E ++ A + ++ G ++ +
Sbjct: 343 RHSGVEINNC-----TVTSVISACGRPSMVCEASQVHAWVFKS-GFYLDSSVAAALISMY 396
Query: 404 SRAGFLDEAHGLIENM 419
S++G +D + + E++
Sbjct: 397 SKSGDIDLSEQVFEDL 412
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 187/438 (42%), Gaps = 83/438 (18%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK 69
S ++Q +F+ L C+ I+ + +VV + L ++ +K L F + A+K
Sbjct: 158 SACSALQAPLFSELVCCHTIK-MGYFFYEVVESAL---IDVFSKNLRF-------EDAYK 206
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
+F + + WN II G R+ + + +M +P+ +TYS +L+AC
Sbjct: 207 VFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEK 266
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
LR G+ V V+ G +VFV T +++ YA G + +A VF + SVVSW +L+G
Sbjct: 267 LRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Query: 190 YVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
Y D A +F EM V + T++I+ C + +A
Sbjct: 326 YTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA--------------- 370
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIH---WYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
++ W+ +Y+ + A ALI MY+ G I
Sbjct: 371 ----------------SQVHAWVFKSGFYLDSSVAA------------ALISMYSKSGDI 402
Query: 303 GDAYQVFTKMP--QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
+ QVF + QR + MI +F++ +A+ LF M+ +G+R D ++
Sbjct: 403 DLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQ-----EGLRTDEFSV 456
Query: 361 IVVLCA--CCHAGFVDEGRRIFAS--MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
+L C + G G + + ++ T G S + L S+ G L+E++ L
Sbjct: 457 CSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS--------LFTLYSKCGSLEESYKLF 508
Query: 417 ENMPLKPNDALWGALLGG 434
+ +P K N A W +++ G
Sbjct: 509 QGIPFKDN-ACWASMISG 525
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 193/398 (48%), Gaps = 45/398 (11%)
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG + +C NV ++I Y G V AR +FD M R +SWN+++ GYV
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRC----------------------------- 227
+ A +F EMP R+ SW M++G A G
Sbjct: 329 EDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 228 --KQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPS 285
K+A+ LF M + +L+LG +H V + ++ P
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI------PD 442
Query: 286 VRLNNALIHMYASCGVIGDAYQVFTKMP-QRSTVSWTSMIMAFAKQGLGKEALGLFKTMV 344
V ++NALI MY+ CG I ++ ++F +M +R ++W +MI +A G EAL LF +M
Sbjct: 443 VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMK 502
Query: 345 SDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS 404
S+G + P IT + VL AC HAG VDE + F SM + I P++EHY +V++ S
Sbjct: 503 SNG-----IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTS 557
Query: 405 RAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYL 464
G +EA +I +MP +P+ +WGALL C+I+ N LA V + ++ L+ + + Y
Sbjct: 558 GQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVA-AEAMSRLEPESSTPY- 615
Query: 465 VLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
VLL N+YA W + VR M +KK G SW+
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 174/408 (42%), Gaps = 72/408 (17%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
++S Y + ++ A LF + + W+ +I G+ ++ +V +R+M ++ P
Sbjct: 142 MISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP- 200
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIV--LVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
L++ ++ L E V G LV G V+ LI Y RG VE AR +
Sbjct: 201 ---LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCL 257
Query: 172 FDGMGQ---------------RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTT 216
FD + ++VVSWNS++ Y+ GD AR +FD+M R+ +SW T
Sbjct: 258 FDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNT 317
Query: 217 MIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRI 276
MI G R + A +LF EM R H +
Sbjct: 318 MIDGYVHVSRMEDAFALFSEMP--------------------------NRDAHSW----- 346
Query: 277 VARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEA 336
N ++ YAS G + A F K P++ TVSW S+I A+ K KEA
Sbjct: 347 -------------NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEA 393
Query: 337 LGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHY 396
+ LF M ++G +PD TL +L A + G ++ + +T + P + +
Sbjct: 394 VDLFIRM-----NIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT--VIPDVPVH 446
Query: 397 GCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
++ + SR G + E+ + + M LK W A++GG H N+ A
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 143/376 (38%), Gaps = 81/376 (21%)
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
L+ +R G + E + K N +I+ Y R + QAR +FD M +R V
Sbjct: 47 LNQMIRSGYIAEARDI----FEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV 102
Query: 181 VSWNSILAGYVSCGD---FDGARRVFDEMPIR---------------------------- 209
V+WN++++GYVSCG + AR++FDEMP R
Sbjct: 103 VTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKM 162
Query: 210 ---NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGR 266
N VSW+ MI G Q G A+ LF +M G +K R
Sbjct: 163 PERNAVSWSAMITGFCQNGEVDSAVVLFRKM---------PVKDSSPLCALVAGLIKNER 213
Query: 267 WIH--WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ---------- 314
W + Q + ++ V N LI Y G + A +F ++P
Sbjct: 214 LSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 315 -----RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
++ VSW SMI A+ K G A LF M D I+ ++ H
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR---------DTISWNTMIDGYVH 324
Query: 370 AGFVDEGRRIFASM-NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
+++ +F+ M NR + MV + G ++ A E P K + W
Sbjct: 325 VSRMEDAFALFSEMPNRD------AHSWNMMVSGYASVGNVELARHYFEKTPEK-HTVSW 377
Query: 429 GALLGGCQIHKNSELA 444
+++ + +K+ + A
Sbjct: 378 NSIIAAYEKNKDYKEA 393
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 18/292 (6%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
++S Y + ++ A F T WN II Y ++ ++V+ + +M +P+
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
T + LLSA LR G Q+H IV VK +V V LI Y+ G + ++R +FD
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIV-VKTVIPDVPVHNALITMYSRCGEIMESRRIFD 467
Query: 174 GMG-QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCK 228
M +R V++WN+++ GY G+ A +F M + +++ +++ CA G
Sbjct: 468 EMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVD 527
Query: 229 QALSLFGEMRRA-RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVR 287
+A + F M ++E G + + I+ +P
Sbjct: 528 EAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMY--------IITSMPFEPDKT 579
Query: 288 LNNALI---HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEA 336
+ AL+ +Y + G+ A + +++ S+ + + +A GL EA
Sbjct: 580 VWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEA 631
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 22/165 (13%)
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
R N ++ G I +A +F K+ R+TV+W +MI + K+ +A LF M
Sbjct: 41 RATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM--- 97
Query: 347 GAGVDGVRPDAI---TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
+ D + T+I +C F++E R++F M S + M+
Sbjct: 98 ------PKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFS-----WNTMISGY 146
Query: 404 SRAGFLDEAHGLIENMPLKPNDALWGALLGG-CQIHKNSELASVV 447
++ + EA L E MP + N W A++ G CQ N E+ S V
Sbjct: 147 AKNRRIGEALLLFEKMPER-NAVSWSAMITGFCQ---NGEVDSAV 187
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 239/544 (43%), Gaps = 51/544 (9%)
Query: 10 SGRRSIQQHVFTLL-QSCNN---IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
SG + V T++ +SC+N I+ Q H + GL + L+ Y
Sbjct: 129 SGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNG 188
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY--SFLLSA 123
A ++ + +V++ + GY + ++ R+ + + N TY S L +
Sbjct: 189 EAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFS 248
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
+R L QVH ++ G+ + V LIN Y
Sbjct: 249 NLRD--LNLALQVHSRMVRFGFNAEVEACGALINMYG----------------------- 283
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
CG A+RVFD+ +N+ TT++ Q ++AL+LF +M V
Sbjct: 284 --------KCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
LK G +H +V ++ + V + NAL++MYA G I
Sbjct: 336 PNEYTFAILLNSIAELSLLKQGDLLHG-----LVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
DA + F+ M R V+W +MI + GLG+EAL F M+ G P+ IT I V
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI-----FTGEIPNRITFIGV 445
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L AC H GFV++G F + + + + P I+HY C+V LLS+AG +A + P++
Sbjct: 446 LQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEW 505
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAV 483
+ W LL C + +N L V + + D +G VLLSNI+A ++ W+ V V
Sbjct: 506 DVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPND--SGVYVLLSNIHAKSREWEGVAKV 563
Query: 484 RQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
R M GVKK PG SWI I H F+A D H IY + E++ + Y PD+
Sbjct: 564 RSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDV 623
Query: 544 TGAF 547
GAF
Sbjct: 624 AGAF 627
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 181/428 (42%), Gaps = 58/428 (13%)
Query: 22 LLQSCNNIQNLI---QIHSQVVLNGLSQKTNI---ITKLLSFYIASDQLQHAHKLFSTID 75
LL+ C N L IH+ +++ S + I L++ Y+ + A KLF +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMV-STEAEPNGFTYSFLLSACVRGGLLREGE 134
+ W +++GY S ++ ++ ++ M S E+ PN F + + +C G + EG+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
Q HG L G S+ FV L+ Y+ G +A V D + + ++S L+GY+ CG
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 195 DF----DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
F D R+ +E + N +++ + +L LF +R
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLS-------------SLRLFSNLR------------ 251
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
DL L +H R+V R V ALI+MY CG + A +VF
Sbjct: 252 ----------DLNLALQVH----SRMV-RFGFNAEVEACGALINMYGKCGKVLYAQRVFD 296
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
++ T+++ A+ + +EAL LF M V P+ T ++L +
Sbjct: 297 DTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM-----DTKEVPPNEYTFAILLNSIAEL 351
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
+ +G + + ++ G + +V++ +++G +++A M + + W
Sbjct: 352 SLLKQGDLLHGLVLKS-GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNT 409
Query: 431 LLGGCQIH 438
++ GC H
Sbjct: 410 MISGCSHH 417
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 245/534 (45%), Gaps = 52/534 (9%)
Query: 12 RRSIQQHVFTL--LQSCNNIQNLIQ----IHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
++S+ FTL + SC ++ L +H+++ + + I + LL+ Y
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE--AEPNGFTYSFLLSA 123
A+ +F +++ W +I G ++ ++++ + M + +P+ + + +A
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
C LR G QVHG ++ G NVFV ++LI+ Y+
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYS----------------------- 522
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
CG + A +VF M N+V+W +MI+ ++ + ++ LF M +
Sbjct: 523 --------KCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF 574
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
L G+ +H Y + + + L NALI MY CG
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTH-----LKNALIDMYVKCGFSK 629
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
A +F KM +S ++W MI + G AL LF M G PD +T + +
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES-----PDDVTFLSL 684
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
+ AC H+GFV+EG+ IF M + +GI P +EHY MVDLL RAG L+EA+ I+ MP++
Sbjct: 685 ISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEA 744
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAV 483
+ ++W LL + H N EL + KL+ ++ + + Y+ L+ N+Y A + +
Sbjct: 745 DSSIWLCLLSASRTHHNVELGILSAEKLL-RMEPERGSTYVQLI-NLYMEAGLKNEAAKL 802
Query: 484 RQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVD 537
M E G+ K PG SWI+++ + F +G + I+ +L+ +K + VD
Sbjct: 803 LGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNR-LKSNMVD 855
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 197/454 (43%), Gaps = 62/454 (13%)
Query: 11 GRRSIQQHVFT---LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQL 64
G VFT LL++C+ + NL IH VV+ G I T L++ Y+ L
Sbjct: 52 GSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFL 111
Query: 65 QHAHKLF-------STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
+A ++F S + TVWN +I GY + + V C+R+M+ P+ F+
Sbjct: 112 DYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSL 171
Query: 118 SFLLSACVRGGLLR--EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
S ++S + G R EG+Q+HG +L ++ F++T LI+ Y G
Sbjct: 172 SIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFG------------ 219
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-NVVSWTTMIAGCAQKGRCKQALSLF 234
S+ +W RVF E+ + NVV W MI G G C+ +L L+
Sbjct: 220 --LSIDAW-----------------RVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
+ V+ + GR IH V + + P V +L+
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGL---HNDPYV--CTSLLS 315
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MY+ CG++G+A VF+ + + W +M+ A+A+ G AL LF M V
Sbjct: 316 MYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ-----KSVL 370
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASM-NRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
PD+ TL V+ C G + G+ + A + R + IE ++ L S+ G +A+
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAY 428
Query: 414 GLIENMPLKPNDALWGALLGG-CQIHKNSELASV 446
+ ++M K A WG+L+ G C+ K E V
Sbjct: 429 LVFKSMEEKDMVA-WGSLISGLCKNGKFKEALKV 461
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 170/397 (42%), Gaps = 56/397 (14%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH VV GL + T LLS Y + A +FS + + +WN ++ YA +
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEND 352
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ +++ + M P+ FT S ++S C GL G+ VH + + S +E+
Sbjct: 353 YGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES 412
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM------- 206
L+ Y+ G A VF M ++ +V+W S+++G G F A +VF +M
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 472
Query: 207 -PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
P +++ T++ CA + L + G M +K G
Sbjct: 473 KPDSDIM--TSVTNACAGLEALRFGLQVHGSM------------------------IKTG 506
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
++ +V ++LI +Y+ CG+ A +VFT M + V+W SMI
Sbjct: 507 LVLNVFV----------------GSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS 550
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
+++ L + ++ LF M+S G+ PD++++ VL A + +G+ + R
Sbjct: 551 CYSRNNLPELSIDLFNLMLS-----QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
GI ++D+ + GF A + + M K
Sbjct: 606 L-GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK 641
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 252/558 (45%), Gaps = 95/558 (17%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH V+ +G +++ +L Y SD L A KLF + W+ +IR Y +S
Sbjct: 146 KIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSK 204
Query: 94 TPWKSVECYRQMV-STEAEPNGFTYSFLLSAC-----------VRGGLLREGEQVHGIVL 141
P ++ +++MV + EP+ T + +L AC V G +R G + + +
Sbjct: 205 EPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFV 264
Query: 142 V--------KGY-------------CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
KG+ C N+ +++ + ++A +F M Q +V
Sbjct: 265 CNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAV 324
Query: 181 ---------------------------------------VSWNSILAGYVSCGDFDGARR 201
V+ +S++ Y SC D A
Sbjct: 325 EVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGT 384
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD 261
V D M ++VVS +TMI+G A GR +A+S+F MR D
Sbjct: 385 VLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSAD 441
Query: 262 LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWT 321
L+ +W H +R +A N + + +++ YA CG I A + F ++ +++ +SWT
Sbjct: 442 LRTSKWAHGIAIRRSLAIND----ISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWT 497
Query: 322 SMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
+I A+A GL +AL LF M G P+A+T + L AC H G V +G IF
Sbjct: 498 VIISAYAINGLPDKALALFDEMKQ-----KGYTPNAVTYLAALSACNHGGLVKKGLMIFK 552
Query: 382 SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP--LKPNDALWGALLGGCQIHK 439
SM P ++HY C+VD+LSRAG +D A LI+N+P +K + WGA+L GC +
Sbjct: 553 SMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC---R 608
Query: 440 NSELASVVEPKLVA---ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
N ++ ++VA EL+ ++GYL L S+ +A K W+DV +R+ + E V+
Sbjct: 609 NRFKKLIITSEVVAEVLELEPLCSSGYL-LASSTFAAEKSWEDVAMMRRLVKERKVRVVA 667
Query: 497 GQSWIQINGVVHDFVAGD 514
G S ++ + F+AGD
Sbjct: 668 GYSMVREGNLAKRFLAGD 685
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 155/415 (37%), Gaps = 74/415 (17%)
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
FY+ L + F +++ + WN I+ G + + + ++ EPN T
Sbjct: 70 FYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTST 129
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
++ AC L +GE++HG V+ G+C V+ +++ YA
Sbjct: 130 LVLVIHAC--RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYAD--------------- 172
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
D AR++FDEM R+V+SW+ +I Q L LF E
Sbjct: 173 -----------------SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKE 215
Query: 237 M-RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
M A+ E D+ +GR +H + + R V + N+LI M
Sbjct: 216 MVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFS----IRRGFDLADVFVCNSLIDM 271
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD---- 351
Y+ + A++VF + R+ VSW S++ F EAL +F MV + VD
Sbjct: 272 YSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTV 331
Query: 352 --------------------------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
G + + L ++ A VD+ + SM
Sbjct: 332 VSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTY 391
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
+S M+ L+ AG DEA + +M PN +LL C + +
Sbjct: 392 KDVVSC-----STMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSAD 441
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 11/227 (4%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V +LL+ C + + IH ++ G ++ L+ Y + + A + ++
Sbjct: 331 VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT 390
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ +I G A + +++ + M T PN T LL+AC LR +
Sbjct: 391 YKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKW 447
Query: 136 VHGIVLVKGYCSN-VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
HGI + + N + V T++++ YA G +E AR FD + +++++SW I++ Y G
Sbjct: 448 AHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAING 507
Query: 195 DFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
D A +FDEM + N V++ ++ C G K+ L +F M
Sbjct: 508 LPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM 554
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 218/471 (46%), Gaps = 47/471 (9%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF---STIDNPSTTVWNHIIRGYA 90
Q+H VV +GL I+ L+ Y L +A +F N S VWN ++ G+
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 91 RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
+ ++ Q+ ++ + +T S L C+ LR G QVH +V+V GY +
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI 378
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN 210
V + L++ +A G ++ A ++F +P ++
Sbjct: 379 VGSILVDLHANVGNIQDAH-------------------------------KLFHRLPNKD 407
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
+++++ +I GC + G A LF E+ + ++ L G+ IH
Sbjct: 408 IIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHG 467
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
++ + +P AL+ MY CG I + +F M +R VSWT +I+ F +
Sbjct: 468 LCIKK---GYESEPVTA--TALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQN 522
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G +EA F M++ G + P+ +T + +L AC H+G ++E R +M +G+
Sbjct: 523 GRVEEAFRYFHKMINIG-----IEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLE 577
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
P +EHY C+VDLL +AG EA+ LI MPL+P+ +W +LL C HKN+ L +V+ K
Sbjct: 578 PYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEK 637
Query: 451 LVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWI 501
L+ D + LSN YA W + VR+ ++G K+ G SWI
Sbjct: 638 LLKGFPDDPSV--YTSLSNAYATLGMWDQLSKVREAAKKLGAKE-SGMSWI 685
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 198/444 (44%), Gaps = 21/444 (4%)
Query: 23 LQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L+ C +Q + I + V+ G+SQ I ++S Y+ L AHK+F + +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEP-NGFTYSFLLSACVRGGLLREGEQVHG 138
W ++ GY P K++E YR+M+ +E E N F YS +L AC G ++ G V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+ + +V + ++++ Y G + +A F + + S SWN++++GY G D
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
A +F MP NVVSW +I+G KG +AL M+R +
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF--TKMPQRS 316
G L +G+ +H V ++ + S +ALI MY++CG + A VF K+ S
Sbjct: 251 GGLLTMGKQLHC-----CVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 317 TVS-WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+V+ W SM+ F + AL L + D+ TL L C + +
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCF-----DSYTLSGALKICINYVNLRL 360
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G ++ S+ G +VDL + G + +AH L +P K A G L+ GC
Sbjct: 361 GLQVH-SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG-LIRGC 418
Query: 436 QIHKNSELASVVEPKLVA-ELDTD 458
+ LA + +L+ LD D
Sbjct: 419 VKSGFNSLAFYLFRELIKLGLDAD 442
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L+ C N NL +Q+HS VV++G + + L+ + +Q AHKLF + N
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
++ +IRG +S + +R+++ + + F S +L C L G+Q+HG+
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
+ KGY S T L++ Y G ++ +FDGM +R VVSW I+ G+ G + A
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEA 528
Query: 200 RRVFDEM------PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
R F +M P N V++ +++ C G ++A S M+
Sbjct: 529 FRYFHKMINIGIEP--NKVTFLGLLSACRHSGLLEEARSTLETMK 571
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 223/488 (45%), Gaps = 58/488 (11%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L++ C + N+ IQ+H +V GL T L+ FY + A ++F + +
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNG--FTYSFLLSACVRGGLLREGEQV 136
+WN ++ Y + ++ + M S + G FT+S LLSAC + +G+Q+
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQI 263
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H I+ Y ++ V T L+N YA ++ H+ D
Sbjct: 264 HAILFKVSYQFDIPVATALLNMYA------KSNHLSD----------------------- 294
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
AR F+ M +RNVVSW MI G AQ G ++A+ LFG+M ++
Sbjct: 295 --ARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSC 352
Query: 257 XXXGDLKLGRWIHWYVQQ--RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
+ W ++Q +V + + + N+LI Y+ G + +A F + +
Sbjct: 353 AKFSAI-------WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE 405
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
VSWTS+I A A G +E+L +F++M+ ++PD IT + VL AC H G V
Sbjct: 406 PDLVSWTSVIGALASHGFAEESLQMFESMLQK------LQPDKITFLEVLSACSHGGLVQ 459
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
EG R F M + I EHY C++DLL RAGF+DEA ++ +MP +P+ A GG
Sbjct: 460 EGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGG 519
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK- 493
C IH+ E KL+ E++ Y + LSN Y W +R++
Sbjct: 520 CNIHEKRESMKWGAKKLL-EIEPTKPVNYSI-LSNAYVSEGHWNQAALLRKRERRNCYNP 577
Query: 494 KPPGQSWI 501
K PG SW+
Sbjct: 578 KTPGCSWL 585
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 199/447 (44%), Gaps = 60/447 (13%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
L S +++ ++ Q H +V G+ + KLL Y + A KLF + +
Sbjct: 45 LSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVT 104
Query: 82 WNHIIRGYA--------RSHTPWKSVECY-RQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
WN +I G R+H + CY +++ T+ + ++ L+ C ++
Sbjct: 105 WNILIHGVIQRDGDTNHRAHLGF----CYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKA 160
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G Q+H +++ +G S+ F T+L++FY G + +AR VF+ + R +V WN++++ YV
Sbjct: 161 GIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVL 220
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA-RVEXXXXXXXX 251
G D A + M + K R + F + A R+E
Sbjct: 221 NGMIDEAFGLLKLMG--------------SDKNRFRGDYFTFSSLLSACRIEQ------- 259
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
G+ IH I+ + Q + + AL++MYA + DA + F
Sbjct: 260 -------------GKQIH-----AILFKVSYQFDIPVATALLNMYAKSNHLSDARECFES 301
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
M R+ VSW +MI+ FA+ G G+EA+ LF M+ ++ ++PD +T VL +C
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQML-----LENLQPDELTFASVLSSCAKFS 356
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
+ E +++ A + + G + + ++ SR G L EA ++ +P+ W ++
Sbjct: 357 AIWEIKQVQAMVTKK-GSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSV 414
Query: 432 LGGCQIHKNSELASVVEPKLVAELDTD 458
+G H +E + + ++ +L D
Sbjct: 415 IGALASHGFAEESLQMFESMLQKLQPD 441
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 137/306 (44%), Gaps = 31/306 (10%)
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQK----------GRCKQALSL 233
N +L Y +FD A ++FDEMP+RN+V+W +I G Q+ G C + L
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
F ++ V ++K G +H ++ + + S + +L+
Sbjct: 135 FTDVSLDHVSFMGLIRLCTDST-----NMKAGIQLHC-----LMVKQGLESSCFPSTSLV 184
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
H Y CG+I +A +VF + R V W +++ ++ G+ EA GL K M SD +
Sbjct: 185 HFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDK---NRF 241
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
R D T +L AC +++G++I A + + I ++++ +++ L +A
Sbjct: 242 RGDYFTFSSLLSAC----RIEQGKQIHAILFKV-SYQFDIPVATALLNMYAKSNHLSDAR 296
Query: 414 GLIENMPLKPNDALWGALL-GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYA 472
E+M ++ N W A++ G Q + E + L+ L D + +LS+
Sbjct: 297 ECFESMVVR-NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELT-FASVLSSCAK 354
Query: 473 FAKRWQ 478
F+ W+
Sbjct: 355 FSAIWE 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 110/222 (49%), Gaps = 3/222 (1%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
F+ L S I+ QIH+ + + T LL+ Y S+ L A + F ++ +
Sbjct: 247 TFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRN 306
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN +I G+A++ +++ + QM+ +P+ T++ +LS+C + + E +QV
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQA 366
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+V KG + V +LI+ Y+ G + +A F + + +VSW S++ S G +
Sbjct: 367 MVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEE 426
Query: 199 ARRVFDEMPIR---NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ ++F+ M + + +++ +++ C+ G ++ L F M
Sbjct: 427 SLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRM 468
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 230/515 (44%), Gaps = 50/515 (9%)
Query: 29 IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRG 88
I+ + IH G+ + T LL Y + L+ A KLFS + + + +N +I G
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISG 327
Query: 89 YARSH--TPWKSVECYRQMVSTE---AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVK 143
+ + T S E ++ + + EP+ T+S +L AC L G Q+H ++
Sbjct: 328 FLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN 387
Query: 144 GYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVF 203
+ S+ F+ + LI YA G E DGM + F
Sbjct: 388 NFQSDEFIGSALIELYALMGSTE------DGM-------------------------QCF 416
Query: 204 DEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLK 263
+++ SWT+MI Q + + A LF ++ + + L
Sbjct: 417 ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALS 476
Query: 264 LGRWIHWY-VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTS 322
G I Y ++ I A + S I MYA G + A QVF ++ ++++
Sbjct: 477 SGEQIQGYAIKSGIDAFTSVKTSS------ISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 323 MIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFAS 382
MI + A+ G EAL +F++M + G ++P+ + VL ACCH G V +G + F
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHG-----IKPNQQAFLGVLIACCHGGLVTQGLKYFQC 585
Query: 383 MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSE 442
M + I+P +H+ C+VDLL R G L +A LI + + + W ALL C+++K+S
Sbjct: 586 MKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSV 645
Query: 443 LASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
+ V +L+ EL+ + + Y VLL NIY + VR+ M + GVKK P SWI
Sbjct: 646 IGKRVAERLM-ELEPEASGSY-VLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIV 703
Query: 503 INGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVD 537
I H F D++H S IY +L + VD
Sbjct: 704 IGNQTHSFAVADLSHPSSQMIYTMLETMDNVDFVD 738
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 128/274 (46%), Gaps = 16/274 (5%)
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y C + AR++FD MP RN++S+ ++I+G Q G +QA+ LF E R A ++
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
DL LG +H +V N V L N LI MY+ CG + A +F
Sbjct: 152 AGALGFCGERCDLDLGELLHG-----LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF 206
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC- 368
+ +R VSW S+I + + G +E L L M DG + L VL ACC
Sbjct: 207 DRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNL-----TTYALGSVLKACCI 261
Query: 369 --HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
+ GF+++G I + G+ I ++D+ ++ G L EA L MP K N
Sbjct: 262 NLNEGFIEKGMAIHCYTAK-LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK-NVV 319
Query: 427 LWGALLGG-CQIHKNSELASVVEPKLVAELDTDG 459
+ A++ G Q+ + ++ AS KL ++ G
Sbjct: 320 TYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG 353
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 144/329 (43%), Gaps = 43/329 (13%)
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
Y +L A +LF + + +N +I GY + +++E + + + + FTY
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 118 SFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ 177
+ L C L GE +HG+V+V G VF+ LI+ Y+ G ++QA +FD +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 178 RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
R VSWNS+++GYV G + + +M R+ ++ TT G K C
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMH-RDGLNLTTYALGSVLKACC---------- 260
Query: 238 RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
G ++ G IH Y A+ + + + AL+ MYA
Sbjct: 261 -----------------INLNEGFIEKGMAIHCY-----TAKLGMEFDIVVRTALLDMYA 298
Query: 298 SCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG-----LGKEALGLFKTMVSDGAGVDG 352
G + +A ++F+ MP ++ V++ +MI F + EA LF M G
Sbjct: 299 KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQR-----RG 353
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFA 381
+ P T VVL AC A ++ GR+I A
Sbjct: 354 LEPSPSTFSVVLKACSAAKTLEYGRQIHA 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MY C +G A Q+F +MP+R+ +S+ S+I + + G ++A+ LF A ++
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLE-----AREANLK 145
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
D T L C +D G + + G+S ++ ++D+ S+ G LD+A
Sbjct: 146 LDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMS 204
Query: 415 LIENMPLKPNDALWGALLGGCQIHKNSELASVVEP-KLVAELDTDG 459
L + + + W +L+ G + + EP L+A++ DG
Sbjct: 205 LFDRCD-ERDQVSWNSLISG-----YVRVGAAEEPLNLLAKMHRDG 244
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 198/418 (47%), Gaps = 15/418 (3%)
Query: 86 IRGYARSHTPWKSVECYRQMVSTEAEP-NGFTYSFLLSACVRGGLLREGEQVHGIVLVKG 144
+ YA +++ + QM S+ A P + +S L +C G VH +
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 145 YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFD 204
+ SN FV L++ Y V AR +FD + QR+ V WN++++ Y CG A +++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 205 EMPIR-NVVSWTTMIAG-CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDL 262
M + N S+ +I G + +A+ + +M R + G
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 263 KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTS 322
+L + IH Y RN +P +L + L+ Y CG I VF M R V+W+S
Sbjct: 199 RLIKEIHSYA-----FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSS 253
Query: 323 MIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFAS 382
+I A+A G + AL F+ M + V PD I + VL AC HAG DE F
Sbjct: 254 LISAYALHGDAESALKTFQEM-----ELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 383 MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSE 442
M +G+ +HY C+VD+LSR G +EA+ +I+ MP KP WGALLG C+ + E
Sbjct: 309 MQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIE 368
Query: 443 LASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
LA + +L+ ++ + A Y VLL IY R ++ +R KM E GVK PG SW
Sbjct: 369 LAEIAARELLM-VEPENPANY-VLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 41/265 (15%)
Query: 15 IQQHVFTL-LQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKL 70
+ HVF+L L+SC + +H+ V + + LL Y + HA KL
Sbjct: 46 LDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKL 105
Query: 71 FSTIDNPSTTVWNHIIRGY--------------ARSHTP-------------------WK 97
F I + VWN +I Y A P ++
Sbjct: 106 FDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR 165
Query: 98 SVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLIN 157
++E YR+M+ +PN T L+SAC G R +++H + +++ L+
Sbjct: 166 AIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVE 225
Query: 158 FYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VS 213
Y G + + VFD M R VV+W+S+++ Y GD + A + F EM + V ++
Sbjct: 226 AYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIA 285
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMR 238
+ ++ C+ G +AL F M+
Sbjct: 286 FLNVLKACSHAGLADEALVYFKRMQ 310
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 147/529 (27%), Positives = 238/529 (44%), Gaps = 82/529 (15%)
Query: 17 QHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
Q + L+SC + + +IH +V GL + ++KLL+F D +++A +F + N
Sbjct: 29 QKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLD-IRYASSIFEHVSN 87
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
+ ++N +IRGY+ S P ++ + Q+ + + F++ L +C R + GE +
Sbjct: 88 TNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGL 147
Query: 137 HGIVLVKG--------------YC--------SNVFVE----------TNLINFYAGRGG 164
HGI L G YC VF E + L+N Y
Sbjct: 148 HGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSK 207
Query: 165 VEQARHVFDGMGQRSVVSWNSILAGYVSC----GDFDGA--------------------- 199
A +F M + VV S L ++S GD GA
Sbjct: 208 KALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITA 267
Query: 200 --------------RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
RR+FD ++VV+W MI A+ G ++ + L +M+ +++
Sbjct: 268 LIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPN 327
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
+GR + +++ +A + L AL+ MYA G++ A
Sbjct: 328 SSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAI-----LGTALVDMYAKVGLLEKA 382
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
++F +M + SWT+MI + GL +EA+ LF M + V RP+ IT +VVL
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKV---RPNEITFLVVLN 439
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC H G V EG R F M + +P++EHYGC+VDLL RAG L+EA+ LI N+P+ +
Sbjct: 440 ACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDS 499
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFA 474
W ALL C+++ N++L V +L +T A +LL+ +A A
Sbjct: 500 TAWRALLAACRVYGNADLGESVMMRLAEMGETHPADA--ILLAGTHAVA 546
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 226/484 (46%), Gaps = 44/484 (9%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H Q+V G ++ T L++ Y+ + + ++++ TI N W +I G R
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
K++ + +M+ + ++ + + ++++C + G G VHG VL GY +
Sbjct: 327 AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDT----- 381
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
+ NS++ Y CG D + +F+ M R++VSW
Sbjct: 382 --------------------------PALNSLITMYAKCGHLDKSLVIFERMNERDLVSW 415
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX-XXXGDLKLGRWIHWYVQ 273
+I+G AQ +AL LF EM+ V+ G L +G+ IH
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHC--- 472
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
IV R+ +P ++ AL+ MY+ CG + A + F + + VSW +I + G G
Sbjct: 473 --IVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKG 530
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
AL ++ + G + P+ + + VL +C H G V +G +IF+SM R +G+ P
Sbjct: 531 DIALEIYSEFLHSG-----MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNH 585
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
EH C+VDLL RA +++A + +P+ + G +L C+ + +E+ ++ ++
Sbjct: 586 EHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMI- 644
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
EL G AG+ V L + +A KRW DV +M +G+KK PG S I++NG F
Sbjct: 645 ELKP-GDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMN 703
Query: 514 DMTH 517
+H
Sbjct: 704 HTSH 707
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 185/427 (43%), Gaps = 45/427 (10%)
Query: 21 TLLQSCNNIQNLIQI---HSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
TLL+ + + + Q+ H V+ G ++ +L+ Y D + A LF ++
Sbjct: 149 TLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR 208
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I GYA + ++ +M P+ T+ LS L G +H
Sbjct: 209 DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH 268
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
++ G+ ++ ++T LI Y + CG +
Sbjct: 269 CQIVKTGFDVDMHLKTALITMY-------------------------------LKCGKEE 297
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
+ RV + +P ++VV WT MI+G + GR ++AL +F EM ++ +
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCA 357
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G LG +H YV + P++ N+LI MYA CG + + +F +M +R
Sbjct: 358 QLGSFDLGASVHGYVLRH--GYTLDTPAL---NSLITMYAKCGHLDKSLVIFERMNERDL 412
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSW ++I +A+ +AL LF+ M + D+ T++ +L AC AG + G+
Sbjct: 413 VSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ----QVDSFTVVSLLQACSSAGALPVGK 468
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
I + R++ I P +VD+ S+ G+L+ A +++ K + WG L+ G
Sbjct: 469 LIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGF 526
Query: 438 HKNSELA 444
H ++A
Sbjct: 527 HGKGDIA 533
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 176/417 (42%), Gaps = 49/417 (11%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+LL++C ++Q L + IH QV++NG S I + L++ Y L HA K+F +
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRER 110
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
W +I Y+R+ ++ +M +P T +LS + + + + +H
Sbjct: 111 DVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE---ITQLQCLH 167
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
++ G+ ++ V +++N Y V A+ +FD M QR +VSWN++++GY S G+
Sbjct: 168 DFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNM- 226
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
+ L L MR +
Sbjct: 227 ------------------------------SEILKLLYRMRGDGLRPDQQTFGASLSVSG 256
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
DL++GR +H + + + L ALI MY CG +Y+V +P +
Sbjct: 257 TMCDLEMGRMLHCQ-----IVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDV 311
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
V WT MI + G ++AL +F M+ G+ + +AI +V CA G D G
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLS---SEAIASVVASCA--QLGSFDLGA 366
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ + R G + ++ + ++ G LD++ + E M + + W A++ G
Sbjct: 367 SVHGYVLRH-GYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 174/406 (42%), Gaps = 52/406 (12%)
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSV-ECYRQMVSTEAEPNGFTYSFLLSACVRGGLL 130
S++ N + +HI + SH K V + M++ + P+ FT+ LL AC L
Sbjct: 5 SSVLNSTKYFNSHI--NHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRL 62
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
G +H VLV G+ S+ ++ ++L+N YA G + AR
Sbjct: 63 SFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHAR--------------------- 101
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
+VF+EM R+VV WT MI ++ G +A SL EMR ++
Sbjct: 102 ----------KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLL 151
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
G L++ + + I + + + N+++++Y C +GDA +F
Sbjct: 152 EMLS-----GVLEITQLQCLHDFAVIYGFD---CDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+M QR VSW +MI +A G E L L M DG+RPD T L
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG-----DGLRPDQQTFGASLSVSGTM 258
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
++ GR + + +T G + ++ + + G + ++ ++E +P K + W
Sbjct: 259 CDLEMGRMLHCQIVKT-GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK-DVVCWTV 316
Query: 431 LLGGCQIHKNSELASVVEPKLV---AELDTDGAAGYLVLLSNIYAF 473
++ G +E A +V +++ ++L ++ A + + + +F
Sbjct: 317 MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 12/240 (5%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
SG + + +++ SC + + +H V+ +G + T + L++ Y L
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDK 399
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACV 125
+ +F ++ WN II GYA++ K++ + +M T + + FT LL AC
Sbjct: 400 SLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACS 459
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
G L G+ +H IV+ V+T L++ Y+ G +E A+ FD + + VVSW
Sbjct: 460 SAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGI 519
Query: 186 ILAGYVSCGDFDGARRVFDEM------PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
++AGY G D A ++ E P N V + +++ C+ G +Q L +F M R
Sbjct: 520 LIAGYGFHGKGDIALEIYSEFLHSGMEP--NHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 224/502 (44%), Gaps = 42/502 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H V +G T + L+ FY SD L+ AHK+F + +P WN ++ GY +S
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGY-CSNVFVE 152
+ + + ++ ++ PN F+++ L+AC R L G +H ++ G NV V
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA------------------------ 188
LI+ Y G ++ A VF M ++ VSWN+I+A
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTV 255
Query: 189 -------GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
+V GDF+ A +V +MP N SW T++ G + +A F +M +
Sbjct: 256 TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSG 315
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
V + G IH + + V + +ALI MY+ CG+
Sbjct: 316 VRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGL-----DSRVVVASALIDMYSKCGM 370
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
+ A +F MP+++ + W MI +A+ G EA+ LF + + ++PD T +
Sbjct: 371 LKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERF----LKPDRFTFL 426
Query: 362 VVLCACCHAGFVDEGRR-IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
+L C H E F M + I P +EH ++ + + G + +A +I+
Sbjct: 427 NLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFG 486
Query: 421 LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDV 480
+ W ALLG C K+ + A V K++ D D +++SN+YA+ +RW++V
Sbjct: 487 FGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREV 546
Query: 481 IAVRQKMIEMGVKKPPGQSWIQ 502
+R+ M E GV K G SWI
Sbjct: 547 GQIRKIMRESGVLKEVGSSWID 568
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 153/400 (38%), Gaps = 67/400 (16%)
Query: 78 STTVWNHIIRGYARSHTPWKSVECYR---QMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
S+ W+ I+ AR + S+ R ++++ +P+ LL G +
Sbjct: 20 SSNSWSTIVPALAR----FGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCR 75
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
Q+HG V G+ SN + +L+ FY +E A VFD M V+SWNS+++GYV G
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 195 DFDGARRVFDEMP----IRNVVSWTTMIAGCAQ--------------------------- 223
F +F E+ N S+T +A CA+
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 224 ------KGRC---KQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
G+C A+ +F M E G L+LG W
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHME----EKDTVSWNAIVASCSRNGKLELGLWFF----- 246
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
P N LI + G +A+QV + MP ++ SW +++ +
Sbjct: 247 ----HQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSG 302
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EA F M S GVR D +L +VL A V G I A ++ G+ R+
Sbjct: 303 EATEFFTKMHS-----SGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKL-GLDSRVV 356
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++D+ S+ G L A + MP K N +W ++ G
Sbjct: 357 VASALIDMYSKCGMLKHAELMFWTMPRK-NLIVWNEMISG 395
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 237/495 (47%), Gaps = 57/495 (11%)
Query: 15 IQQHVFT-LLQSCNNI---QNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKL 70
+ H FT +L +C+ + + Q+H+ ++ G T T L+ Y L + ++
Sbjct: 82 LSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRV 141
Query: 71 FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLL 130
F +++ WN ++ G+ R+ +++ + M E + FT S ++ C +L
Sbjct: 142 FESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKIL 201
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAG 189
++G+QVH +V+V G V + T +I+FY+ G + +A V++ + V NS+++G
Sbjct: 202 QQGKQVHAMVVVTGR-DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISG 260
Query: 190 YVSCGDFDGARRVFD-EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
+ ++ A + + P NV ++ +AGC+
Sbjct: 261 CIRNRNYKEAFLLMSRQRP--NVRVLSSSLAGCSDNS----------------------- 295
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
DL +G+ IH + RN +L N L+ MY CG I A +
Sbjct: 296 ------------DLWIGKQIHC-----VALRNGFVSDSKLCNGLMDMYGKCGQIVQARTI 338
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F +P +S VSWTSMI A+A G G +AL +F+ M +G+GV P+++T +VV+ AC
Sbjct: 339 FRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGV---LPNSVTFLVVISACA 395
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND--- 425
HAG V EG+ F M + + P EHY C +D+LS+AG +E L+E M N
Sbjct: 396 HAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIP 455
Query: 426 -ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVR 484
A+W A+L C ++ + V +L+ E + A+ Y VL+SN YA +W V +R
Sbjct: 456 CAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIY-VLVSNFYAAMGKWDVVEELR 514
Query: 485 QKMIEMGVKKPPGQS 499
K+ G+ K G S
Sbjct: 515 GKLKNKGLVKTAGHS 529
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 142/358 (39%), Gaps = 49/358 (13%)
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
HA LF + + N + + RS P ++ + Q+ + + T++ +L AC
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS 95
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
G QVH +++ +G + +T LI+ Y+ G + + VF+ + ++ +VSWN+
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
+L+G+ +RN G+ K+AL +F M R RVE
Sbjct: 156 LLSGF-----------------LRN--------------GKGKEALGVFAAMYRERVEIS 184
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
L+ G+ +H V + R+ V L A+I Y+S G+I +A
Sbjct: 185 EFTLSSVVKTCASLKILQQGKQVHAMVV--VTGRDL----VVLGTAMISFYSSVGLINEA 238
Query: 306 YQVFTKMP-QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
+V+ + V S+I + KEA L RP+ L L
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ----------RPNVRVLSSSL 288
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
C + G++I R +S G M D+ + G + +A + +P K
Sbjct: 289 AGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLM-DMYGKCGQIVQARTIFRAIPSK 345
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 117/269 (43%), Gaps = 12/269 (4%)
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
F +G +V S N +L A +FDE+P R++ S + ++ + G L
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
+LF ++ RA + + GR +H ++ + + A
Sbjct: 70 ALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVH-----ALMIKQGAETGTISKTA 124
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
LI MY+ G + D+ +VF + ++ VSW +++ F + G GKEALG+F M +
Sbjct: 125 LIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYR-----E 179
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
V TL V+ C + +G+++ A + T + M+ S G ++E
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINE 237
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIHKN 440
A + ++ + ++ + +L+ GC ++N
Sbjct: 238 AMKVYNSLNVHTDEVMLNSLISGCIRNRN 266
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 4 ERFVPASGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIA 60
E F+ S +R + + + L C++ +L QIH + NG + + L+ Y
Sbjct: 269 EAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGK 328
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVS--TEAEPNGFTYS 118
Q+ A +F I + S W +I YA + K++E +R+M + PN T+
Sbjct: 329 CGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFL 388
Query: 119 FLLSACVRGGLLREGEQVHGIV 140
++SAC GL++EG++ G++
Sbjct: 389 VVISACAHAGLVKEGKECFGMM 410
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 218/466 (46%), Gaps = 46/466 (9%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI-DNPSTTVWNHIIRGYARSH 93
H V+ + S + + LLS Y + L A KLF I + + WN +++GY +
Sbjct: 353 FHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMK 412
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
K +E +R++ + E + + + ++S+C G + G+ +H V+ + V
Sbjct: 413 CHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVN 472
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+LI+ Y G + V+W R+F E NV++
Sbjct: 473 SLIDLYGKMGDL--------------TVAW-----------------RMFCEADT-NVIT 500
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W MIA + ++A++LF M + G L+ G+ IH Y+
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + + ++ L+ ALI MYA CG + + ++F Q+ V W MI + G
Sbjct: 561 E-----TEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDV 615
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+ A+ LF M V+P T + +L AC HAG V++G+++F M++ + + P +
Sbjct: 616 ESAIALFDQMEESD-----VKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNL 669
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
+HY C+VDLLSR+G L+EA + +MP P+ +WG LL C H E+ + + VA
Sbjct: 670 KHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVA 729
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQS 499
+ GY ++L+N+Y+ A +W++ R+ M E GV K G S
Sbjct: 730 SDPQND--GYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 8/230 (3%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+++ SC++I ++ +H VV L +++ L+ Y L A ++F D
Sbjct: 438 SVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTN 497
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
T WN +I Y K++ + +MVS +P+ T LL ACV G L G+ +H
Sbjct: 498 VIT-WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIH 556
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
+ + N+ + LI+ YA G +E++R +FD Q+ V WN +++GY GD +
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 198 GARRVFDEMPIRNVV----SWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
A +FD+M +V ++ +++ C G +Q LF +M + V+
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVK 666
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 157/355 (44%), Gaps = 43/355 (12%)
Query: 5 RFVPASGRRSIQQHVFTLLQSCN---NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS 61
R + +S + +H+ +L C+ ++++L + ++ ++ GLS+ + +KL+S Y +
Sbjct: 15 RKLSSSSASYVDRHISVIL--CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASY 72
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
+ + ++F + +WN II+ + + +S+ + M+ + P+ FT ++
Sbjct: 73 GKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVV 132
Query: 122 SACVRGGLLREGEQVHGIVLVK-GYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
SAC G VHG+VL G+ N V + + FY+ G ++ A VFD M R V
Sbjct: 133 SACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDV 192
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPI--RNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
V+W +I++G+V G+ +G +M +V C QA S
Sbjct: 193 VAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGF-----QACS------ 241
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
G LK GR +H + +N S + +++ Y+
Sbjct: 242 -------------------NLGALKEGRCLHGF-----AVKNGLASSKFVQSSMFSFYSK 277
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
G +AY F ++ SWTS+I + A+ G +E+ +F M + G DGV
Sbjct: 278 SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 54/285 (18%)
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
+ +++ G N+FV + LI+ YA G + VF + +R + WNSI+ + S GD+
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 197 DGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
+ F M + + + +++ CA+
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAEL---------------------------- 138
Query: 253 XXXXXXXGDLKLGRWIH--WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
W H +V ++ + + + ++ Y+ CG + DA VF
Sbjct: 139 -------------LWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFD 185
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+MP R V+WT++I + G + LG M S G+ VD +P+ TL AC +
Sbjct: 186 EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD--KPNPRTLECGFQACSNL 243
Query: 371 GFVDEGRRI--FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
G + EGR + FA N G++ M S++G EA+
Sbjct: 244 GALKEGRCLHGFAVKN---GLASSKFVQSSMFSFYSKSGNPSEAY 285
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 206/421 (48%), Gaps = 45/421 (10%)
Query: 82 WNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
WN II ++RS KS++ + +M + P+ FT +L AC + G+ +H +
Sbjct: 101 WNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLC 160
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
L G+ S++FV + L+ Y V G AR
Sbjct: 161 LKLGFSSSLFVSSALVIMY-------------------------------VDMGKLLHAR 189
Query: 201 RVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
++FD+MP+R+ V +T M G Q+G L++F EM + G
Sbjct: 190 KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLG 249
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
LK G+ +H + +R + L NA+ MY C ++ A+ VF M +R +SW
Sbjct: 250 ALKHGKSVHGWCIRRCSCLG-----LNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
+S+I+ + G + LF M+ +G + P+A+T + VL AC H G V++ F
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEG-----IEPNAVTFLGVLSACAHGGLVEKSWLYF 359
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
M + I P ++HY + D +SRAG L+EA +E+MP+KP++A+ GA+L GC+++ N
Sbjct: 360 RLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGN 418
Query: 441 SELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
E+ V +L+ +L A+ Y V L+ +Y+ A R+ + ++RQ M E + K PG S
Sbjct: 419 VEVGERVARELI-QLKPRKAS-YYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSS 476
Query: 501 I 501
I
Sbjct: 477 I 477
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 4/212 (1%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH + G S + + L+ Y+ +L HA KLF + + ++ + GY +
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+ +R+M + + LL AC + G L+ G+ VHG + + C + +
Sbjct: 216 AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNA 275
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----N 210
+ + Y ++ A VF M +R V+SW+S++ GY GD + ++FDEM N
Sbjct: 276 ITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPN 335
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
V++ +++ CA G +++ F M+ +
Sbjct: 336 AVTFLGVLSACAHGGLVEKSWLYFRLMQEYNI 367
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 23/279 (8%)
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXX 254
F + VF MP RN+ SW +I ++ G +++ LF M R + V
Sbjct: 83 FPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILR 142
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
+ K G IH + + S+ +++AL+ MY G + A ++F MP
Sbjct: 143 ACSASREAKSGDLIH-----VLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPV 197
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R +V +T+M + +QG L +F+ M G G D++ ++ +L AC G +
Sbjct: 198 RDSVLYTAMFGGYVQQGEAMLGLAMFREM-----GYSGFALDSVVMVSLLMACGQLGALK 252
Query: 375 EGRRIFASMNRTWGISPRIEHYG-----CMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G+ + W I R G + D+ + LD AH + NM + + W
Sbjct: 253 HGKSV-----HGWCIR-RCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS-RRDVISWS 305
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
+L+ G + + ++ + +++ E A +L +LS
Sbjct: 306 SLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLS 344
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 245/541 (45%), Gaps = 81/541 (14%)
Query: 31 NLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYA 90
N ++HS V + L++ T+L FY +D L A KLF S +WN IIR YA
Sbjct: 23 NTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 91 RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSA-----------CVRGGLLREG---EQV 136
++H + + Q++ ++ P+ FTY+ L C+ G + G +Q+
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 137 HGIVLVKGYC-SNVFVETN----------------LINFYAGRGGVEQARHVFDGMGQRS 179
G +VK Y + + VE + +I Y G ++ ++F+ M R
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 180 ---------------------VVSWN------------------SILAGYVSCGDFDGAR 200
+V+W+ +++ Y C A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 201 RVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
VF+ + ++V+ +++I G ++ G K+AL LF E+R + +
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
D G+ +H YV R + +++ +ALI MY+ CG++ A +F +P+++ VS+
Sbjct: 323 DSVSGKEVHSYV-----IRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
S+I+ G A F ++ G + PD IT +LC CCH+G +++G+ IF
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMG-----LIPDEITFSALLCTCCHSGLLNKGQEIF 432
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
M +GI P+ EHY MV L+ AG L+EA + ++ + + GALL C++H+N
Sbjct: 433 ERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHEN 492
Query: 441 SELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
+ LA VV + + + + Y V+LSN+YA RW +V +R + E K PG SW
Sbjct: 493 THLAEVVAEN-IHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Query: 501 I 501
Sbjct: 552 F 552
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
SG++ V +L SC + + + ++HS V+ GL + + L+ Y L+
Sbjct: 302 SGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKC 361
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
A LF+ I + +N +I G + E + +++ P+ T+S LL C
Sbjct: 362 AMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCH 421
Query: 127 GGLLREGEQV 136
GLL +G+++
Sbjct: 422 SGLLNKGQEI 431
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 153/566 (27%), Positives = 238/566 (42%), Gaps = 80/566 (14%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIA 60
ML + F P++ + ++ C + +H +GL + + L+SFY
Sbjct: 142 MLQQGFSPSA---TTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSK 198
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
+L A LF + + ST WN +I Y++S +++ ++ M E + T L
Sbjct: 199 CAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINL 258
Query: 121 LSA----------CVRGGLLREGEQVHGIVLVKGYC---------------SNVFVETNL 155
LSA V+ G++ + V +V C ++ T++
Sbjct: 259 LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 156 INFYAGRG-----------------------------GVEQARHVFDGMGQR-------- 178
++ YA +G G +++ H+ GM
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL 378
Query: 179 --SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
+ N ++ Y D + +F+++ ++SW ++I+GC Q GR A +F +
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQ 438
Query: 237 MR-RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
M + L LG+ +H Y RN + + ALI M
Sbjct: 439 MMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYT-----LRNNFENENFVCTALIDM 493
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
YA CG A VF + T +W SMI ++ GL AL + M G ++P
Sbjct: 494 YAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG-----LKP 548
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
D IT + VL AC H GFVDEG+ F +M + +GISP ++HY MV LL RA EA L
Sbjct: 549 DEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYL 608
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK 475
I M +KP+ A+WGALL C IH+ E+ V K+ +G G VL+SN+YA
Sbjct: 609 IWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNG--GLYVLMSNLYATEA 666
Query: 476 RWQDVIAVRQKMIEMGVKKPPGQSWI 501
W DV+ VR M + G G S I
Sbjct: 667 MWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 38/254 (14%)
Query: 102 YRQMVSTEAEPNGFTYSFLLSACVRG--GLLREGEQVHGIVLVKGYCSNVFVETNLINFY 159
+R ++ + PN FT S L A + EQV + G V+V+T+L+N Y
Sbjct: 36 FRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLY 95
Query: 160 AGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIA 219
+G V A+ +FDEMP R+ V W +I
Sbjct: 96 LKKGCVTSAQ-------------------------------MLFDEMPERDTVVWNALIC 124
Query: 220 GCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
G ++ G A LF M + G + GR +H + A+
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVH-----GVAAK 179
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
+ + ++ NALI Y+ C +G A +F +M +STVSW +MI A+++ GL +EA+ +
Sbjct: 180 SGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITV 239
Query: 340 FKTMVSDGAGVDGV 353
FK M + V
Sbjct: 240 FKNMFEKNVEISPV 253
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 165/403 (40%), Gaps = 51/403 (12%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+ + + +GL + + T LL+ Y+ + A LF + T VWN +I GY+R+
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ + + M+ P+ T LL C + G + +G VHG+ G + V+
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV-V 212
LI+FY+ + A +F M +S VSWN+++ Y G + A VF M +NV +
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
S T+I + A V +H
Sbjct: 251 SPVTII-----------------NLLSAHVSHEP---------------------LHC-- 270
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+V + + + +L+ Y+ CG + A +++ Q S V TS++ +A++G
Sbjct: 271 ---LVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGD 327
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
A+ F ++ DA+ L+ +L C + +D G + ++ G+ +
Sbjct: 328 MDIAVVYFSKTRQ-----LCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS-GLCTK 381
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
++ + S+ ++ L E + P + W +++ GC
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLIS-WNSVISGC 423
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 244/502 (48%), Gaps = 25/502 (4%)
Query: 7 VPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
V SG S+ V ++L C +I+ +Q+H + +G + + T L+S Y +
Sbjct: 125 VSGSGMNSVT--VASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVL 182
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARS--HTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC 124
A ++F + + S +N I G + SV + S+E EPN T+ ++AC
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSE-EPNDVTFVNAITAC 241
Query: 125 VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ-RSVVSW 183
L+ G Q+HG+V+ K + V T LI+ Y+ + A VF + R+++SW
Sbjct: 242 ASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISW 301
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRR 239
NS+++G + G + A +F+++ + +W ++I+G +Q G+ +A F M
Sbjct: 302 NSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS 361
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
+ LK G+ IH +V + R+ + + +LI MY C
Sbjct: 362 VVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERD-----IFVLTSLIDMYMKC 416
Query: 300 GVIGDAYQVFTKM-PQ-RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
G+ A ++F + P+ + V W MI + K G + A+ +F+ + + V P
Sbjct: 417 GLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEK-----VEPSL 471
Query: 358 ITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
T VL AC H G V++G +IF M +G P EH GCM+DLL R+G L EA +I+
Sbjct: 472 ATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVID 531
Query: 418 NMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRW 477
M + +LLG C+ H + L KL AEL+ + A + V+LS+IYA +RW
Sbjct: 532 QMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKL-AELEPENPAPF-VILSSIYAALERW 588
Query: 478 QDVIAVRQKMIEMGVKKPPGQS 499
+DV ++RQ + + + K PG S
Sbjct: 589 EDVESIRQVIDQKQLVKLPGLS 610
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 166/394 (42%), Gaps = 65/394 (16%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LL+SC + +++Q +H+QVV G T L+S Y+ Q+ A K+ +
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERG 96
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
N + G + + + + + N T + +L C G + G Q+H
Sbjct: 97 IASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHC 153
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG---- 194
+ + G+ V+V T+L++ Y+ G A +F+ + +SVV++N+ ++G + G
Sbjct: 154 LAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNL 213
Query: 195 ---DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
F+ R+ E P N V++ I CA SL
Sbjct: 214 VPSVFNLMRKFSSEEP--NDVTFVNAITACA---------SLL----------------- 245
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
+L+ GR +H +V + + Q + ALI MY+ C AY VFT+
Sbjct: 246 ---------NLQYGRQLHG-----LVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTE 291
Query: 312 MPQ-RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+ R+ +SW S+I G + A+ LF+ + S +G++PD+ T ++
Sbjct: 292 LKDTRNLISWNSVISGMMINGQHETAVELFEKLDS-----EGLKPDSATWNSLISGFSQL 346
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS 404
G V E + F M + P ++ C+ LLS
Sbjct: 347 GKVIEAFKFFERMLSVVMV-PSLK---CLTSLLS 376
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 143/349 (40%), Gaps = 50/349 (14%)
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
PN FT+ LL +C + G + +G +H V+ G+ +VF T L++ Y + + V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYM------KVKQV 82
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
D + +V DEMP R + S ++G + G C+ A
Sbjct: 83 TDAL-------------------------KVLDEMPERGIASVNAAVSGLLENGFCRDAF 117
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
+FG+ ARV GD++ G +H + ++ + V + +
Sbjct: 118 RMFGD---ARVSGSGMNSVTVASVLGGCGDIEGGMQLHC-----LAMKSGFEMEVYVGTS 169
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
L+ MY+ CG A ++F K+P +S V++ + I + G+ +F M
Sbjct: 170 LVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLM----RKFS 225
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFA-SMNRTWGISPRIEHYGCMVDLLSRAGFLD 410
P+ +T + + AC + GR++ M + + + ++D+ S+
Sbjct: 226 SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT--ALIDMYSKCRCWK 283
Query: 411 EAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDG 459
A+ + + N W +++ G I+ E A +L +LD++G
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAV----ELFEKLDSEG 328
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 226/486 (46%), Gaps = 47/486 (9%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH++++++ + LL Y + ++ A +F I NP+ WN II G + +
Sbjct: 322 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGF 381
Query: 95 PWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+++ YR+++ + P+ +T+S +SA G+ +HG V GY +VFV T
Sbjct: 382 GEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGT 441
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
L++ Y E A++VFD M R+VV
Sbjct: 442 TLLSMYFKNREAE-------------------------------SAQKVFDVMKERDVVL 470
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT MI G ++ G + A+ F EM R + L+ G H
Sbjct: 471 WTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHC--- 527
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ R + + AL+ MY G A +F+ W SM+ A+++ G+
Sbjct: 528 --LAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMV 585
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
++AL F+ ++ +G PDA+T + +L AC H G +G+ ++ M + GI
Sbjct: 586 EKALSFFEQILENG-----FMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGF 639
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA-LWGALLGGCQIHKNSELASVVEPKLV 452
+HY CMV+L+S+AG +DEA LIE P N A LW LL C +N ++ + + +
Sbjct: 640 KHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIG-LYAAEQI 698
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQI-NGVVHDFV 511
+LD + A + +LLSN+YA RW+DV +R+K+ + K PG SWI++ N F
Sbjct: 699 LKLDPEDTATH-ILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFS 757
Query: 512 AGDMTH 517
+GD ++
Sbjct: 758 SGDQSN 763
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 190/451 (42%), Gaps = 45/451 (9%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+L+Q C +++++ ++SQ++ G S + T +L Y + L+ A ++F ++N
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I G ++ + +R M+ + +P FTYS +L+ C + G G+ +H
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
++V +++ ++ L++ Y G + +A +VF + ++VSWNSI
Sbjct: 324 ARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI----------- 372
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
I+GC++ G +QA+ ++ + R
Sbjct: 373 --------------------ISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISAT 412
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
+ R++H + V + + SV + L+ MY A +VF M +R
Sbjct: 413 AEPE----RFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDV 468
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
V WT MI+ ++ G + A+ F M + R D +L V+ AC + +G
Sbjct: 469 VLWTEMIVGHSRLGNSELAVQFFIEMYREKN-----RSDGFSLSSVIGACSDMAMLRQG- 522
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
+F + G + G +VD+ + G + A + ++ P+ W ++LG
Sbjct: 523 EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIF-SLASNPDLKCWNSMLGAYSQ 581
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
H E A +++ A YL LL+
Sbjct: 582 HGMVEKALSFFEQILENGFMPDAVTYLSLLA 612
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 156/368 (42%), Gaps = 50/368 (13%)
Query: 6 FVPASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTN---IITKLLSFYI 59
F+P + I V L + C +I L QIH+ V+ G T L+S Y+
Sbjct: 87 FMPLN---EIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYV 143
Query: 60 ASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT-PWKSVECYRQMVSTEAEPNGFTYS 118
L+ A K+F + + + +N + Y+R+ + M +PN T++
Sbjct: 144 RCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFT 203
Query: 119 FLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
L+ C + G ++ ++ GY NV V+T
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQT------------------------- 238
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
S+L Y SCGD + ARR+FD + R+ V+W TMI G + + + L F M
Sbjct: 239 ------SVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
+ V+ G LG+ IH RI+ + + L+NAL+ MY S
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH----ARIIVSDSL-ADLPLDNALLDMYCS 347
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
CG + +A+ VF ++ + VSW S+I ++ G G++A+ +++ ++ + RPD
Sbjct: 348 CGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLR----MSTPRPDEY 403
Query: 359 TLIVVLCA 366
T + A
Sbjct: 404 TFSAAISA 411
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 166/412 (40%), Gaps = 55/412 (13%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPS-------TTVWNHIIRGYARSHTPWKSVECYRQ 104
L+S Y+ L+ A K+F + + + V+ ++ G + H+ + ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMG-SSLHSQIIKLGSFQM 84
Query: 105 MVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGG 164
+ + L CV +L+ Q+H +VL G
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAG-------------------- 124
Query: 165 VEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQK 224
G S + N++++ YV CG + AR+VFD+MP RNVVS+ + + ++
Sbjct: 125 --------AGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRN 176
Query: 225 GR-CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQ 283
A L M V+ D+ +G ++ + + + N
Sbjct: 177 PDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDN--- 233
Query: 284 PSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
V + +++ MY+SCG + A ++F + R V+W +MI+ K ++ L F+ M
Sbjct: 234 --VVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNM 291
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
+ + GV P T +VL C G G+ I A + + ++ + ++D+
Sbjct: 292 L-----MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLAD-LPLDNALLDMY 345
Query: 404 SRAGFLDEA---HGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
G + EA G I N PN W +++ GC + E A ++ +L+
Sbjct: 346 CSCGDMREAFYVFGRIHN----PNLVSWNSIISGCSENGFGEQAMLMYRRLL 393
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 234/513 (45%), Gaps = 80/513 (15%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKL---- 70
+QQ+ TL+Q+ QIH+Q+V+NG ++ KL+ Y + + + KL
Sbjct: 14 LQQNSKTLIQA-------KQIHAQLVING-CHDNSLFGKLIGHYCSKPSTESSSKLAHLL 65
Query: 71 -FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA--EPNGFTYSFLL---SAC 124
F +P ++N +++ P S+ + S + N T+ F+L +
Sbjct: 66 VFPRFGHPDKFLFNTLLK----CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARS 121
Query: 125 VRGGLLREGEQVHGIVLVKGYC-SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
LR G VHG+V G+ + + T L++FYA G
Sbjct: 122 ASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNG-------------------- 161
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG-CAQKGR----CKQALSLFGEMR 238
D AR+VFDEMP R V+W MI G C+ K + ++A+ LF R
Sbjct: 162 -----------DLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLF---R 207
Query: 239 R-----ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
R + V G L++G +H Y+++ + V + AL+
Sbjct: 208 RFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFT---PEVDVFIGTALV 264
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
MY+ CG + +A+ VF M ++ +WTSM A G G E L M G +
Sbjct: 265 DMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESG-----I 319
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
+P+ IT +L A H G V+EG +F SM +G++P IEHYGC+VDLL +AG + EA+
Sbjct: 320 KPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAY 379
Query: 414 GLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA-ELDTDGAAGY----LVLLS 468
I MP+KP+ L +L C I+ + + + L+ E + + +G V LS
Sbjct: 380 QFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALS 439
Query: 469 NIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWI 501
N+ A +W +V +R++M E +K PG S++
Sbjct: 440 NVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 232/510 (45%), Gaps = 53/510 (10%)
Query: 6 FVPASGRRSIQQHVFTLLQSCNNIQNLIQI----HSQVVLNGLSQKTNII-TKLLSFYIA 60
F+P S + V +LL C + + ++ H+ V+++ Q++ ++ T L+ Y+
Sbjct: 144 FIPKS------ELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLK 197
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
D A +F ++ + W +I G + V+ +R M PN T +
Sbjct: 198 FDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSV 257
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
L ACV E +G LVK E + +F G E+ F M
Sbjct: 258 LPACV--------ELNYGSSLVK--------EIHGFSFRHGCHADERLTAAFMTM----- 296
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
Y CG+ +R +F+ +R+VV W++MI+G A+ G C + ++L +MR+
Sbjct: 297 ---------YCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE 347
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
+E L +H + + + L NALI MYA CG
Sbjct: 348 GIEANSVTLLAIVSACTNSTLLSFASTVH-----SQILKCGFMSHILLGNALIDMYAKCG 402
Query: 301 VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
+ A +VF ++ ++ VSW+SMI A+ G G EAL +FK M+ G VD +
Sbjct: 403 SLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDD-----MAF 457
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
+ +L AC HAG V+E + IF + + + +EHY C ++LL R G +D+A + NMP
Sbjct: 458 LAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMP 516
Query: 421 LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDV 480
+KP+ +W +LL C+ H ++A + + + + D A Y VLLS I+ + +
Sbjct: 517 MKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANY-VLLSKIHTESGNYHAA 575
Query: 481 IAVRQKMIEMGVKKPPGQSWIQINGVVHDF 510
VR+ M + K G S I+ + D+
Sbjct: 576 EEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 163/411 (39%), Gaps = 52/411 (12%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H + G T + L+S Y + K+F + + T + II +
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG 127
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR-GGLLREGEQVHGIVLV-KGYCSNVFV 151
+++++ ++M P + LL+ C R G + H +VLV + +V +
Sbjct: 128 LLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLL 187
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
T L++ Y A HVFD M ++ VSW ++++G V+ +++ +F M N+
Sbjct: 188 STALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENL 247
Query: 212 ----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
V+ +++ C + +G L +
Sbjct: 248 RPNRVTLLSVLPACVELN--------YGS--------------------------SLVKE 273
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
IH + R+ RL A + MY CG + + +F R V W+SMI +
Sbjct: 274 IHGF-----SFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGY 328
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
A+ G E + L M +G+ +++TL+ ++ AC ++ + + + + +
Sbjct: 329 AETGDCSEVMNLLNQMRK-----EGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC- 382
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
G I ++D+ ++ G L A + + K + W +++ +H
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINAYGLH 432
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 187/404 (46%), Gaps = 16/404 (3%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH ++ NG + L+ FY L+ + F I + + WN ++ GYA
Sbjct: 337 QIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD 396
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P + + QM+ P +T+S L +C + E +Q+H +++ GY N +V +
Sbjct: 397 GPI-CLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLS 451
Query: 154 NLINFYAGRGGVEQARHVFD-GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
+L+ YA + A + D G SVV N + Y G + + ++ + + V
Sbjct: 452 SLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTV 511
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
SW IA C++ ++ + LF M ++ + DL LG IH +
Sbjct: 512 SWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLI 571
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+ + + N LI MY CG I +VF + +++ ++WT++I G
Sbjct: 572 TKT----DFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGY 627
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
G+EAL FK +S G +PD ++ I +L AC H G V EG +F M + +G+ P
Sbjct: 628 GQEALEKFKETLSLG-----FKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPE 681
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
++HY C VDLL+R G+L EA LI MP + +W L GC
Sbjct: 682 MDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 162/412 (39%), Gaps = 29/412 (7%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H GL + +++ L+S Y A ++F + WN II A+S
Sbjct: 236 QLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSE 295
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P K+++ + M PN TY +L LL G Q+HG+++ G + + +
Sbjct: 296 NPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGN 355
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
LI+FYA G +E +R FD + +++V WN++L+GY + DG PI
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY---ANKDG--------PI----- 399
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
++ Q G + ++ V D L + Y +
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 274 QRIVAR-------NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
+++ SV N + +Y+ G ++ ++ + + Q TVSW I A
Sbjct: 460 NQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAA 519
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
++ +E + LFK M+ +RPD T + +L C + G I + +T
Sbjct: 520 CSRSDYHEEVIELFKHMLQ-----SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKT 574
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
++D+ + G + + E K N W AL+ IH
Sbjct: 575 DFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREK-NLITWTALISCLGIH 625
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 155/392 (39%), Gaps = 46/392 (11%)
Query: 44 LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYR 103
L Q + ++S Y ++ A K+F + + +N II+GY++ K+ +
Sbjct: 45 LLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFS 104
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKG-YCSNVFVETNLINFYAGR 162
+M PN T S LLS +R G Q+HG+ L G + ++ FV T L+ Y
Sbjct: 105 EMRYFGYLPNQSTVSGLLSCASLD--VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRL 162
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCA 222
+E A +VF++MP +++ +W M++
Sbjct: 163 DLLEMAE-------------------------------QVFEDMPFKSLETWNHMMSLLG 191
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
+G K+ + F E+ R DL + + +H ++ +
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGL----- 246
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
+ + N+LI Y CG A ++F VSW ++I A AK +AL LF +
Sbjct: 247 DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS 306
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
M G P+ T + VL + GR+I + + G I ++D
Sbjct: 307 MPE-----HGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDF 360
Query: 403 LSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++ G L+++ + + K N W ALL G
Sbjct: 361 YAKCGNLEDSRLCFDYIRDK-NIVCWNALLSG 391
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 133/353 (37%), Gaps = 69/353 (19%)
Query: 33 IQIHSQVVLNGLSQKTNII-------TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHI 85
+ + + L+GLS K + T LL Y D L+ A ++F + S WNH+
Sbjct: 127 LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHM 186
Query: 86 I-----RGYARSHTPWKSVEC---YRQMVSTEAEPNGFTYSFLLS--ACVRGGLLREGEQ 135
+ RG+ + EC +R++V A ++ +L +CV+ L +Q
Sbjct: 187 MSLLGHRGFLK--------ECMFFFRELVRMGASLTESSFLGVLKGVSCVKD--LDISKQ 236
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H KG + V +LI+ Y G A +F G +VSWN+I+
Sbjct: 237 LHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAK--- 293
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
E P++ AL LF M
Sbjct: 294 --------SENPLK--------------------ALKLFVSMPEHGFSPNQGTYVSVLGV 325
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L GR IH ++ +N + + L NALI YA CG + D+ F + +
Sbjct: 326 SSLVQLLSCGRQIHG-----MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDK 380
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
+ V W +++ +A + G L LF M+ G RP T L +CC
Sbjct: 381 NIVCWNALLSGYANKD-GPICLSLFLQMLQ-----MGFRPTEYTFSTALKSCC 427
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 91/233 (39%), Gaps = 39/233 (16%)
Query: 120 LLSACVRGGLLREGEQVHG--IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ 177
LL+ C + + +H I L V+V N+I+ Y G V A VFD M +
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 178 RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
R+ VS+N+I+ GY GD D A VF EM + + ++G LS
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSG---------LLSCASLD 128
Query: 238 RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
RA + LK G ++ + L+ +Y
Sbjct: 129 VRAGTQLHGL-------------SLKYGLFM---------------ADAFVGTCLLCLYG 160
Query: 298 SCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
++ A QVF MP +S +W M+ +G KE + F+ +V GA +
Sbjct: 161 RLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASL 213
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 230/500 (46%), Gaps = 52/500 (10%)
Query: 12 RRSIQQHVFT---LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
R ++ + FT +L+SC ++ L +QIH V + + + LLS Y +++
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKME 165
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A F ++ WN +I GY + S ++ M++ +P+ FT+ LL A +
Sbjct: 166 EARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASI 225
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
L ++HG+ + G+ RS S
Sbjct: 226 VVKCLEIVSELHGLAIKLGF-------------------------------GRSSALIRS 254
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRC-KQALSLFGEMRRARVEX 244
++ YV CG A ++ + R+++S T +I G +Q+ C A +F +M R + +
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
+ +GR IH + + +Q + V L N+LI MYA G I D
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFA----LKSSQIRFDVALGNSLIDMYAKSGEIED 370
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A F +M ++ SWTS+I + + G ++A+ L+ M + ++P+ +T + +L
Sbjct: 371 AVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER-----IKPNDVTFLSLL 425
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP--LK 422
AC H G + G +I+ +M GI R EH C++D+L+R+G+L+EA+ LI + +
Sbjct: 426 SACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVS 485
Query: 423 PNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIA 482
+ + WGA L C+ H N +L+ V +L++ ++ Y+ L S +YA W + +
Sbjct: 486 LSSSTWGAFLDACRRHGNVQLSKVAATQLLS-MEPRKPVNYINLAS-VYAANGAWDNALN 543
Query: 483 VRQKMIEMG-VKKPPGQSWI 501
R+ M E G K PG S +
Sbjct: 544 TRKLMKESGSCNKAPGYSLV 563
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 194/444 (43%), Gaps = 45/444 (10%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHII 86
N + L+ IH + NG + L+ Y+ ++HA KLF I W +I
Sbjct: 26 NVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMI 85
Query: 87 RGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYC 146
++R ++ +++M + + N FTY +L +C G L+EG Q+HG V KG C
Sbjct: 86 SRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV-EKGNC 144
Query: 147 S-NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDE 205
+ N+ V + L++ YA G +E+AR FD M +R +VSWN+++ GY + D + +F
Sbjct: 145 AGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQL 204
Query: 206 MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
M +K C FG + RA + L++
Sbjct: 205 MLTE------------GKKPDCFT----FGSLLRASIVVKC---------------LEIV 233
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
+H + R S L +L++ Y CG + +A+++ +R +S T++I
Sbjct: 234 SELHGLAIKLGFGR-----SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALIT 288
Query: 326 AFAKQ-GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMN 384
F++Q +A +FK M+ +D V ++ I C V GR+I
Sbjct: 289 GFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKI-----CTTIASVTIGRQIHGFAL 343
Query: 385 RTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
++ I + ++D+ +++G +++A E M K + W +L+ G H N E A
Sbjct: 344 KSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRS-WTSLIAGYGRHGNFEKA 402
Query: 445 SVVEPKLVAELDTDGAAGYLVLLS 468
+ ++ E +L LLS
Sbjct: 403 IDLYNRMEHERIKPNDVTFLSLLS 426
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 217/477 (45%), Gaps = 38/477 (7%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H + ++ + L+S Y ++ A +LF + WN II Y
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGY--CSNVFVE 152
++ + +M + E + T++ + GG L G + + V G C+
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWN-----TIAGGCLEAGNYIGALNCVVGMRNCNVRIGS 320
Query: 153 TNLINFYAGRGGVEQARH--------VFDGMGQRSVV-------SWNSILAGYVSCGDFD 197
+IN G++ H VF + RS NS++ Y C D
Sbjct: 321 VAMIN------GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLR 374
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A VF ++ ++ +W ++I+G A R ++ L EM +
Sbjct: 375 HAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFA 434
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G+L+ G+ H Y I+ R + + L N+L+ MYA G I A +VF M +R
Sbjct: 435 RVGNLQHGKEFHCY----ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK 490
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
V++TS+I + + G G+ AL FK M G++PD +T++ VL AC H+ V EG
Sbjct: 491 VTYTSLIDGYGRLGKGEVALAWFKDM-----DRSGIKPDHVTMVAVLSACSHSNLVREGH 545
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
+F M +GI R+EHY CMVDL RAG+LD+A + +P +P+ A+ LL C I
Sbjct: 546 WLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLI 605
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
H N+ + KL+ E + G+ +LL+++YA W ++ V+ + ++GV+K
Sbjct: 606 HGNTNIGEWAADKLLLETKPE-HLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 191/421 (45%), Gaps = 16/421 (3%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+LL +C + Q+H+ + +GL + ++ KL++FY A + L A + +
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I Y R+ +SV Y++M+S + FTY ++ AC G VH
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G + V + N++V LI+ Y G V+ AR +FD M +R VSWN+I+ Y S
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 198 GARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
A ++ D M + ++V+W T+ GC + G AL+ MR V
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
G LK G+ H V R + + +VR N+LI MY+ C + A+ VF ++
Sbjct: 328 KACSHIGALKWGKVFHCLV-IRSCSFSHDIDNVR--NSLITMYSRCSDLRHAFIVFQQVE 384
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
S +W S+I FA +E L K M+ + G P+ ITL +L G +
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEML-----LSGFHPNHITLASILPLFARVGNL 439
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
G+ + R + + +VD+ +++G + A + ++M K + + +L+
Sbjct: 440 QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLID 498
Query: 434 G 434
G
Sbjct: 499 G 499
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 217/477 (45%), Gaps = 38/477 (7%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H + ++ + L+S Y ++ A +LF + WN II Y
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGY--CSNVFVE 152
++ + +M + E + T++ + GG L G + + V G C+
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWN-----TIAGGCLEAGNYIGALNCVVGMRNCNVRIGS 320
Query: 153 TNLINFYAGRGGVEQARH--------VFDGMGQRSVV-------SWNSILAGYVSCGDFD 197
+IN G++ H VF + RS NS++ Y C D
Sbjct: 321 VAMIN------GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLR 374
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A VF ++ ++ +W ++I+G A R ++ L EM +
Sbjct: 375 HAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFA 434
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G+L+ G+ H Y I+ R + + L N+L+ MYA G I A +VF M +R
Sbjct: 435 RVGNLQHGKEFHCY----ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK 490
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
V++TS+I + + G G+ AL FK M G++PD +T++ VL AC H+ V EG
Sbjct: 491 VTYTSLIDGYGRLGKGEVALAWFKDM-----DRSGIKPDHVTMVAVLSACSHSNLVREGH 545
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
+F M +GI R+EHY CMVDL RAG+LD+A + +P +P+ A+ LL C I
Sbjct: 546 WLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLI 605
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
H N+ + KL+ E + G+ +LL+++YA W ++ V+ + ++GV+K
Sbjct: 606 HGNTNIGEWAADKLLLETKPE-HLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 191/421 (45%), Gaps = 16/421 (3%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+LL +C + Q+H+ + +GL + ++ KL++FY A + L A + +
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I Y R+ +SV Y++M+S + FTY ++ AC G VH
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G + V + N++V LI+ Y G V+ AR +FD M +R VSWN+I+ Y S
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 198 GARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
A ++ D M + ++V+W T+ GC + G AL+ MR V
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
G LK G+ H V R + + +VR N+LI MY+ C + A+ VF ++
Sbjct: 328 KACSHIGALKWGKVFHCLV-IRSCSFSHDIDNVR--NSLITMYSRCSDLRHAFIVFQQVE 384
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
S +W S+I FA +E L K M+ + G P+ ITL +L G +
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEML-----LSGFHPNHITLASILPLFARVGNL 439
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
G+ + R + + +VD+ +++G + A + ++M K + + +L+
Sbjct: 440 QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLID 498
Query: 434 G 434
G
Sbjct: 499 G 499
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 223/504 (44%), Gaps = 55/504 (10%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH + G + L+S Y L+ +F + + W +I S
Sbjct: 297 QIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SS 351
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+V + M PN T+ L++A ++EG ++HG+ + G+ S V
Sbjct: 352 NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN 411
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+ I YA +E A+ + F+++ R ++S
Sbjct: 412 SFITLYAKFEALEDAK-------------------------------KAFEDITFREIIS 440
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG-DLKLGRWIHWYV 272
W MI+G AQ G +AL +F + +K G+ H ++
Sbjct: 441 WNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHL 500
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+ + P V ++AL+ MYA G I ++ +VF +M Q++ WTS+I A++ G
Sbjct: 501 LKLGL---NSCPVV--SSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGD 555
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
+ + LF M+ + V PD +T + VL AC G VD+G IF M + + P
Sbjct: 556 FETVMNLFHKMIKEN-----VAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPS 610
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
EHY CMVD+L RAG L EA L+ +P P +++ ++LG C++H N ++ + V +L
Sbjct: 611 HEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKV-AELA 669
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQING-----VV 507
E+ + + Y V + NIYA + W +R+ M + V K G SWI + +
Sbjct: 670 MEMKPELSGSY-VQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTM 728
Query: 508 HDFVAGDMTHKHSYFIYEILSEII 531
F +GD +H S IY ++ EII
Sbjct: 729 QGFSSGDKSHPKSDEIYRMV-EII 751
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 179/415 (43%), Gaps = 55/415 (13%)
Query: 23 LQSCN-NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
L++C +++ QIH +G + + ++ Y + + +A +F + +P
Sbjct: 85 LKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
WN I+ G+ + V +M S + FTYS LS CV G Q+ V+
Sbjct: 145 WNTILSGFDDNQIALNFV---VRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
G S++ V NS + Y G F GARR
Sbjct: 202 KTGLESDLVV-------------------------------GNSFITMYSRSGSFRGARR 230
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCK-QALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
VFDEM ++++SW ++++G +Q+G +A+ +F +M R VE
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
DLKL R IH +R + + + N L+ Y+ CGV+ VF +M +R+ VSW
Sbjct: 291 DLKLARQIHGLCIKR-----GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSW 345
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
T+MI + +A+ +F M DGV P+ +T + ++ A + EG +I
Sbjct: 346 TTMISSNK-----DDAVSIFLNM-----RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIH 395
Query: 381 ASMNRTWGIS-PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+T +S P + + + L ++ L++A E++ + + W A++ G
Sbjct: 396 GLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFREIIS-WNAMISG 447
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 26 CNN-IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNH 84
CN I+ ++IH + G + ++ ++ Y + L+ A K F I WN
Sbjct: 384 CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNA 443
Query: 85 IIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG--LLREGEQVHGIVLV 142
+I G+A++ ++++ + + E PN +T+ +L+A +++G++ H +L
Sbjct: 444 MISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRV 202
G S V + L++ YA RG ++++ VF+ M Q++ W SI++ Y S GDF+ +
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNL 562
Query: 203 FDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEM 237
F +M NV V++ +++ C +KG + +F M
Sbjct: 563 FHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMM 601
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 137/528 (25%), Positives = 228/528 (43%), Gaps = 58/528 (10%)
Query: 60 ASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSF 119
A D +Q T D W +I G + +++++ +R+M PN T
Sbjct: 301 AMDLMQKMETFGITAD---VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
+SAC ++ +G +VH I + G+ +V V +L++ Y+ G +E AR VFD + +
Sbjct: 358 AVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 180 V-----------------------------------VSWNSILAGYVSCGDFDGARRVFD 204
V ++WN++++GY+ GD A +F
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Query: 205 EMPI-----RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
M RN +W +IAG Q G+ +AL LF +M+ +R
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
K+ R IH V +R + + NAL YA G I + +F M + ++
Sbjct: 538 LGAKMVREIHGCVLRRNLDAIHA-----VKNALTDTYAKSGDIEYSRTIFLGMETKDIIT 592
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
W S+I + G AL LF M + G + P+ TL ++ A G VDEG+++
Sbjct: 593 WNSLIGGYVLHGSYGPALALFNQMKTQG-----ITPNRGTLSSIILAHGLMGNVDEGKKV 647
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK 439
F S+ + I P +EH MV L RA L+EA I+ M ++ +W + L GC+IH
Sbjct: 648 FYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHG 707
Query: 440 NSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQS 499
+ ++A L + + A +V S IYA + + + + +KKP GQS
Sbjct: 708 DIDMAIHAAENLFSLEPENTATESIV--SQIYALGAKLGRSLEGNKPRRDNLLKKPLGQS 765
Query: 500 WIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
WI++ ++H F GD + + +Y ++ K S +D+ G
Sbjct: 766 WIEVRNLIHTFTTGDQSKLCTDVLYPLVE---KMSRLDNRSDQYNGEL 810
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 197/493 (39%), Gaps = 70/493 (14%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLN---GLSQKTNII--TKLLSFYIASDQLQ 65
G + + LL+SC + + IH +L+ GL + ++ TKLLS Y +
Sbjct: 76 GSKVKRSTYLKLLESCIDSGS---IHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIA 132
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSV-ECYRQMVSTEAEPNGFTYSFLLSAC 124
A K+F ++ + W+ +I Y+R + W+ V + +R M+ P+ F + +L C
Sbjct: 133 DARKVFDSMRERNLFTWSAMIGAYSRENR-WREVAKLFRLMMKDGVLPDDFLFPKILQGC 191
Query: 125 VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWN 184
G + G+ +H +V+ G S + V +++ YA G ++ A F M +R V++WN
Sbjct: 192 ANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWN 251
Query: 185 SILAGYVSCGDFDGARRVFDEMP------------------------------------- 207
S+L Y G + A + EM
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETF 311
Query: 208 --IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
+V +WT MI+G G QAL +F +M A V + G
Sbjct: 312 GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG 371
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
+H I + V + N+L+ MY+ CG + DA +VF + + +W SMI
Sbjct: 372 SEVH-----SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMIT 426
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
+ + G +A LF T + D +RP+ IT ++ G E +F M +
Sbjct: 427 GYCQAGYCGKAYELF-TRMQDA----NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK---PNDALWGALLGGCQIHKNSE 442
+ + ++ + G DEA L M PN +LL C
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC------- 534
Query: 443 LASVVEPKLVAEL 455
A+++ K+V E+
Sbjct: 535 -ANLLGAKMVREI 546
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 27/267 (10%)
Query: 260 GDLKLGRWIHWYVQQRIVARNQ--QQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G + LGR +H AR +P V + L+ MYA CG I DA +VF M +R+
Sbjct: 95 GSIHLGRILH--------ARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL 146
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+W++MI A++++ +E LF+ M+ DGV PD +L C + G V+ G+
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMK-----DGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
I + + + G+S + ++ + ++ G LD A M + A LL CQ
Sbjct: 202 VIHSVVIKL-GMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN 260
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLV---LLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
K+ E +LV E++ +G + LV +L Y + + + QKM G+
Sbjct: 261 GKHEEAV-----ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA 315
Query: 495 PPGQSWIQINGVVHD---FVAGDMTHK 518
I+G++H+ + A DM K
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRK 342
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
Query: 47 KTNIIT--KLLSFYIASDQLQHAHKLFSTIDNP-----STTVWNHIIRGYARSHTPWKSV 99
+ NIIT ++S YI + A LF ++ +T WN II GY ++ +++
Sbjct: 450 RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 100 ECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFY 159
E +R+M + PN T LL AC + ++HG VL + + V+ L + Y
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTY 569
Query: 160 AGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
A G +E +R +F GM + +++WNS++ GYV G + A +F++M + +
Sbjct: 570 AKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT 622
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 226/474 (47%), Gaps = 30/474 (6%)
Query: 76 NP---STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
NP T WN +I GYA++ ++++ M + + ++ +L+ L+
Sbjct: 219 NPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKI 278
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQAR--HVFDGMGQRSVVSWNSILAGY 190
G++VH VL G SN FV + +++ Y G ++ A H+ G G ++ S +S++ GY
Sbjct: 279 GKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFG--NLYSASSMIVGY 336
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
S G A+R+FD + +N+V WT M G + L E+ RA +
Sbjct: 337 SSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVL----ELARAFIANETNTPD 392
Query: 251 XXXXXX-----XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
++ G+ IH + + + ++ +L A + MY+ CG + A
Sbjct: 393 SLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDK-----KLVTAFVDMYSKCGNVEYA 447
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
++F +R TV + +MI A G ++ F+ M G +PD IT + +L
Sbjct: 448 ERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGG-----FKPDEITFMALLS 502
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC H G V EG + F SM + ISP HY CM+DL +A LD+A L+E + D
Sbjct: 503 ACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKD 562
Query: 426 A-LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVR 484
A + GA L C +KN+EL VE KL+ ++G+ + ++N YA + RW ++ +R
Sbjct: 563 AVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSR--YIQIANAYASSGRWDEMQRIR 620
Query: 485 QKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ-SHVD 537
+M ++ G SW I+ H F + D++H + IY +L + K S +D
Sbjct: 621 HQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSEID 674
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 193/425 (45%), Gaps = 52/425 (12%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTV--WNHIIRGYARSH-TPWKSVECYRQMVSTEA 110
+++ Y+ + ++ A +LF + DN + +N ++ G+A++ +++E + +M E
Sbjct: 60 VIAAYVKFNNVKEARELFES-DNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEK 118
Query: 111 EP---NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQ 167
+ + FT + ++ + + GEQ+HG+++ G F ++LI+ Y+ G ++
Sbjct: 119 DDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKE 178
Query: 168 ARHVFDGMGQRSV--VSWNSILAGYVSCGDFDGARRVFDEMP-IRNVVSWTTMIAGCAQK 224
++F+G V V+ N+++A Y GD D A VF P + + +SW T+IAG AQ
Sbjct: 179 VCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQN 238
Query: 225 GRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQP 284
G ++AL + M ++ LK+G+ +H V +N
Sbjct: 239 GYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVH-----ARVLKNGSYS 293
Query: 285 SVRLNNALIHMYASCG-----------------------VIG--------DAYQVFTKMP 313
+ +++ ++ +Y CG ++G +A ++F +
Sbjct: 294 NKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLS 353
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+++ V WT+M + + L L + +++ PD++ ++ VL AC ++
Sbjct: 354 EKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNT----PDSLVMVSVLGACSLQAYM 409
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
+ G+ I RT GI + VD+ S+ G ++ A + ++ + + ++ A++
Sbjct: 410 EPGKEIHGHSLRT-GILMDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIA 467
Query: 434 GCQIH 438
GC H
Sbjct: 468 GCAHH 472
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 51/264 (19%)
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETN-LINFYAGRGGVEQARHVFDGMGQRSVVS 182
C++ G L H I +K + V +N L+N Y+ G + +AR+VFD M +R+V S
Sbjct: 3 CLKDGFL------HHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYS 56
Query: 183 WNSILAGYVSCGDFDGARRVFD-EMPIRNVVSWTTMIAGCAQKGRCK-QALSLFGEMRRA 240
WN+++A YV + AR +F+ + R+++++ T+++G A+ C+ +A+ +FGEM R
Sbjct: 57 WNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRK 116
Query: 241 RVEXXXXXXXXXXXXXXXXGDLK---LGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
+ L G +H ++ + + ++LIHMY+
Sbjct: 117 EKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLH-----GVLVKTGNDGTKFAVSSLIHMYS 171
Query: 298 SCGV---------------------------------IGDAYQVFTKMPQ-RSTVSWTSM 323
CG I A VF + P+ T+SW ++
Sbjct: 172 KCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTL 231
Query: 324 IMAFAKQGLGKEALGLFKTMVSDG 347
I +A+ G +EAL + +M +G
Sbjct: 232 IAGYAQNGYEEEALKMAVSMEENG 255
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 5/188 (2%)
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE-PNGFT 116
Y + ++ A +LF ++ + VW + GY P +E R ++ E P+
Sbjct: 336 YSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLV 395
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+L AC + G+++HG L G + + T ++ Y+ G VE A +FD
Sbjct: 396 MVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSF 455
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMP----IRNVVSWTTMIAGCAQKGRCKQALS 232
+R V +N+++AG G + + F++M + +++ +++ C +G +
Sbjct: 456 ERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEK 515
Query: 233 LFGEMRRA 240
F M A
Sbjct: 516 YFKSMIEA 523
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH + G+ ++T + Y +++A ++F + T ++N +I G A
Sbjct: 414 EIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHG 473
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
KS + + M +P+ T+ LLSAC GL+ EGE+ +++ Y N+ ET
Sbjct: 474 HEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFK-SMIEAY--NISPET 530
Query: 154 N----LINFYAGRGGVEQARHVFDGMGQ 177
+I+ Y +++A + +G+ Q
Sbjct: 531 GHYTCMIDLYGKAYRLDKAIELMEGIDQ 558
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 229/509 (44%), Gaps = 50/509 (9%)
Query: 15 IQQHVFT---LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ-HA 67
+Q + FT +L C+ +++L QIHSQ + G T++ L+ Y+ + A
Sbjct: 321 LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEA 380
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG 127
++F + +P+ W +I G +MV E EPN T S +L AC +
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
+R ++H +L RHV DG +V NS++
Sbjct: 441 RHVRRVLEIHAYLL--------------------------RRHV-DG----EMVVGNSLV 469
Query: 188 AGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
Y S D A V M R+ +++T+++ + G+ + ALS+ M +
Sbjct: 470 DAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQL 529
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
G L+ G+ +H Y ++ + + N+L+ MY+ CG + DA +
Sbjct: 530 SLPGFISASANLGALETGKHLHCYS-----VKSGFSGAASVLNSLVDMYSKCGSLEDAKK 584
Query: 308 VFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
VF ++ VSW ++ A G AL F+ M + PD++T +++L AC
Sbjct: 585 VFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM-----RMKETEPDSVTFLILLSAC 639
Query: 368 CHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL 427
+ D G F M + + I P++EHY +V +L RAG L+EA G++E M LKPN +
Sbjct: 640 SNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMI 699
Query: 428 WGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKM 487
+ LL C+ N L + K +A +D A +LL+++Y + + + R M
Sbjct: 700 FKTLLRACRYRGNLSLGEDMANKGLALAPSDPA--LYILLADLYDESGKPELAQKTRNLM 757
Query: 488 IEMGVKKPPGQSWIQINGVVHDFVAGDMT 516
E + K G+S +++ G VH FV+ D+T
Sbjct: 758 TEKRLSKKLGKSTVEVQGKVHSFVSEDVT 786
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 181/420 (43%), Gaps = 47/420 (11%)
Query: 9 ASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
ASG + ++++SC ++++ ++H V+ G + + + L Y Q +
Sbjct: 117 ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFK 176
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A +LFS++ N T W +I + ++++ Y +MV PN FT+ LL A
Sbjct: 177 EACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASS 236
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
GL G+ +H ++V+G NV ++T+L++FY+ +E A V + G++ V W S
Sbjct: 237 FLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTS 295
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
+++G+V RN+ R K+A+ F EMR ++
Sbjct: 296 VVSGFV-----------------RNL--------------RAKEAVGTFLEMRSLGLQPN 324
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG-D 304
L G+ IH Q I + + S + NAL+ MY C +
Sbjct: 325 NFTYSAILSLCSAVRSLDFGKQIH---SQTI--KVGFEDSTDVGNALVDMYMKCSASEVE 379
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A +VF M + VSWT++I+ G ++ GL MV V P+ +TL VL
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK-----REVEPNVVTLSGVL 434
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPN 424
AC V I A + R + + +VD + + +D A +I +M + N
Sbjct: 435 RACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDN 493
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 191/440 (43%), Gaps = 54/440 (12%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IHS +++ G+ + T L+ FY +++ A ++ ++ +W ++ G+ R+
Sbjct: 246 IHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++V + +M S +PN FTYS +LS C L G+Q+H + G+ + V
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365
Query: 155 LINFYAGRGGVE-QARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR---- 209
L++ Y E +A VF M +VVSW +++ G V G + EM R
Sbjct: 366 LVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP 425
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
NVV+ + ++ C++ ++ L + + R V+ G++ +G
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD----------------GEMVVG---- 465
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
N+L+ YAS + A+ V M +R +++TS++ F +
Sbjct: 466 --------------------NSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNE 505
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
G + AL + M DG+R D ++L + A + G ++ G+ + ++ G
Sbjct: 506 LGKHEMALSVINYMYG-----DGIRMDQLSLPGFISASANLGALETGKHLHCYSVKS-GF 559
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN-SELASVVE 448
S +VD+ S+ G L++A + E + P+ W L+ G + S S E
Sbjct: 560 SGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFE 618
Query: 449 PKLVAELDTDGAAGYLVLLS 468
+ E + D +L+LLS
Sbjct: 619 EMRMKETEPDSVT-FLILLS 637
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 180/427 (42%), Gaps = 45/427 (10%)
Query: 14 SIQQHVFTLLQSCNNIQNLI--QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
++Q+ +L C + + I IH V+ GL + ++ LLS Y+ +D + +A KLF
Sbjct: 22 NLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLF 81
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
+ + + W +I + +S ++ + +M+++ PN FT+S ++ +C +
Sbjct: 82 DEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDIS 141
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
G +VHG V+ G+ N V ++L + Y+ G ++A +F + +SW +++ V
Sbjct: 142 YGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLV 201
Query: 192 SCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
GAR+ W ++AL + EM +A V
Sbjct: 202 ------GARK------------W-------------REALQFYSEMVKAGVPPNEFTFVK 230
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
G L+ G+ IH + R + N V L +L+ Y+ + DA +V
Sbjct: 231 LLGASSFLG-LEFGKTIHSNIIVRGIPLN-----VVLKTSLVDFYSQFSKMEDAVRVLNS 284
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
++ WTS++ F + KEA+G F M S G++P+ T +L C
Sbjct: 285 SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRS-----LGLQPNNFTYSAILSLCSAVR 339
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
+D G++I + + G + +VD+ + + + + PN W L
Sbjct: 340 SLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTL 398
Query: 432 LGGCQIH 438
+ G H
Sbjct: 399 ILGLVDH 405
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 183/358 (51%), Gaps = 26/358 (7%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T +++ + L++A K F + S WN ++ GYA++ ++ + M+
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
PN T+ ++SAC + ++ K N FV+T L++ +A ++ AR +
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 172 FDGMG-QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA 230
F+ +G QR++V+WN++++GY GD AR++FD MP RNVVSW ++IAG A G+ A
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 231 LSLFGEM-RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLN 289
+ F +M + DL+LG I Y++ +NQ ++LN
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIR-----KNQ----IKLN 432
Query: 290 N----ALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVS 345
+ +LI MYA G + +A +VF +M +R VS+ ++ AFA G G E L L M
Sbjct: 433 DSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 346 DGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
+G+ PD +T VL AC AG + EG+RIF S+ +P +HY CM DLL
Sbjct: 493 -----EGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 184/448 (41%), Gaps = 70/448 (15%)
Query: 32 LIQIHSQ-VVLNGLSQKTNIITKLLSFYIASDQLQHAHKL-FSTIDNPSTTVWNHIIRGY 89
L QIH+Q +V N L +++ ++++S + +L F ++ P+ V N + + +
Sbjct: 22 LNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYF 81
Query: 90 ARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNV 149
++ + Y Q P+ F++ ++ + R G+L +V G+ +
Sbjct: 82 SKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL-----FQALVEKLGFFKDP 136
Query: 150 FVETNLINFYAGRGGVEQARHVFDGMGQR------------------------------- 178
+V +++ Y VE AR VFD + QR
Sbjct: 137 YVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN 196
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
VVSW ++ G+ D + AR+ FD MP ++VVSW M++G AQ G + AL LF +M
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLN--------- 289
R V D L R + + ++ V N + L+
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 290 ------------------NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
NA+I Y G + A Q+F MP+R+ VSW S+I +A G
Sbjct: 317 SARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNG 376
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
A+ F+ M+ G +PD +T+I VL AC H ++ G I + + I
Sbjct: 377 QAALAIEFFEDMIDYGDS----KPDEVTMISVLSACGHMADLELGDCIVDYIRKN-QIKL 431
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENM 419
Y ++ + +R G L EA + + M
Sbjct: 432 NDSGYRSLIFMYARGGNLWEAKRVFDEM 459
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 227/511 (44%), Gaps = 62/511 (12%)
Query: 44 LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYR 103
++Q T++++ Y++ + A ++F+ + +T +N ++ G+ R+ K+++ +
Sbjct: 347 MAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFT 406
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLRE---GEQVHGIVLVKGYCSNVFVETNLINFYA 160
M+ E F+ + + AC GL+ E EQ+HG + G N ++T L++
Sbjct: 407 DMLQRGVELTDFSLTSAVDAC---GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCT 463
Query: 161 GRGGVEQARHVFDGMGQR--SVVSWNSILAGYVSCGDFDGARRVF-----DEMPIRNVVS 213
+ A +FD S + SI+ GY G D A +F ++ + VS
Sbjct: 464 RCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVS 523
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
T ++A C G F EM G IH Y
Sbjct: 524 LTLILAVCGTLG--------FREM---------------------------GYQIHCYA- 547
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + L N+LI MYA C DA ++F M + +SW S+I + Q G
Sbjct: 548 ----LKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNG 603
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC--CHAGFVDEGRRIFASMNRTWGISP 391
EAL L+ M ++PD ITL +V+ A + + R +F SM + I P
Sbjct: 604 DEALALWSRM-----NEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEP 658
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKL 451
EHY V +L G L+EA I +MP++P ++ ALL C+IH N+ +A V KL
Sbjct: 659 TTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRV-AKL 717
Query: 452 VAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFV 511
+ + + Y +L SNIY+ + W +R++M E G +K P +SWI +H F
Sbjct: 718 ILSTKPETPSEY-ILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFH 776
Query: 512 AGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
A D +H IY L +I + YEP+
Sbjct: 777 ARDTSHPQEKDIYRGLEILIMECLKVGYEPN 807
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 162/366 (44%), Gaps = 17/366 (4%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYI--ASDQLQHAHKLFSTIDN 76
+L +C + IQIH +V +G + L+S Y + KLF I
Sbjct: 187 ILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQ 246
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQ 135
WN ++ + K+ + + +M E + FT S LLS+C +L G +
Sbjct: 247 RDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRE 306
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+HG + G + V LI FY+ +++ +++ M + V++ ++ Y+S G
Sbjct: 307 LHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGM 366
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
D A +F + +N +++ ++AG + G +AL LF +M + VE
Sbjct: 367 VDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDA 426
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
+ K+ IH + + A N P ++ AL+ M C + DA ++F + P
Sbjct: 427 CGLVSEKKVSEQIHGFCIKFGTAFN---PCIQ--TALLDMCTRCERMADAEEMFDQWPSN 481
Query: 316 --STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
S+ + TS+I +A+ GL +A+ LF + + + D ++L ++L C GF
Sbjct: 482 LDSSKATTSIIGGYARNGLPDKAVSLFHRTLCE----QKLFLDEVSLTLILAVCGTLGFR 537
Query: 374 DEGRRI 379
+ G +I
Sbjct: 538 EMGYQI 543
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 145/310 (46%), Gaps = 17/310 (5%)
Query: 46 QKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM 105
+KT + L+S Y+ + A +F ++ +P+ + +I G++R + ++++ + +M
Sbjct: 112 EKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRM 171
Query: 106 VSTE-AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGG 164
+PN +T+ +L+ACVR G Q+HG+++ G+ ++VFV +L++ Y G
Sbjct: 172 RKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSG 231
Query: 165 --VEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI-----RNVVSWTTM 217
+ +FD + QR V SWN++++ V G A +F EM + + +T+
Sbjct: 232 SSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTL 291
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
++ C + L G R + D+K ++ +
Sbjct: 292 LSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMM----- 346
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEAL 337
Q +V +I Y S G++ A ++F + +++T+++ +++ F + G G +AL
Sbjct: 347 ---MAQDAVTFTE-MITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKAL 402
Query: 338 GLFKTMVSDG 347
LF M+ G
Sbjct: 403 KLFTDMLQRG 412
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA-RV 242
N++++ Y+ G A VF + VVS+T +I+G ++ +AL +F MR+A V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY-----A 297
+ LG IH ++ ++ SV ++N+L+ +Y +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHG-----LIVKSGFLNSVFVSNSLMSLYDKDSGS 232
Query: 298 SCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
SC D ++F ++PQR SW +++ + K+G +A LF M V+G D+
Sbjct: 233 SC---DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM----NRVEGFGVDS 285
Query: 358 ITLIVVLCACCHAGFVDEGRRI 379
TL +L +C + + GR +
Sbjct: 286 FTLSTLLSSCTDSSVLLRGREL 307
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 130/548 (23%), Positives = 229/548 (41%), Gaps = 84/548 (15%)
Query: 5 RFVPASGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIAS 61
R + G +S Q ++L +C ++ +Q+H +V +G + + L+ Y
Sbjct: 216 RDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKC 275
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
+++ A L ++ WN +I G R +++ + +M + + + FT +L
Sbjct: 276 REMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Query: 122 SA-CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
+ + ++ H +++ GY + V L++ YA RG +
Sbjct: 336 NCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIM--------------- 380
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
D A +VF+ M ++V+SWT ++ G G +AL LF MR
Sbjct: 381 ----------------DSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHW-YVQQRIVARNQQQPSVRLNNALIHMYASC 299
+ L+ G+ +H Y++ + S+ +NN+L+ MY C
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPS------SLSVNNSLVTMYTKC 478
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G + DA +F M R ++WT +I+ +AK GL
Sbjct: 479 GSLEDANVIFNSMEIRDLITWTCLIVGYAKNGL--------------------------- 511
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+++ +R F SM +GI+P EHY CM+DL R+G + L+ M
Sbjct: 512 -------------LEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM 558
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
++P+ +W A+L + H N E K + EL+ + A Y V LSN+Y+ A R +
Sbjct: 559 EVEPDATVWKAILAASRKHGNIENGERA-AKTLMELEPNNAVPY-VQLSNMYSAAGRQDE 616
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
VR+ M + K PG SW++ G VH F++ D H IY + E++ Y
Sbjct: 617 AANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGY 676
Query: 540 EPDITGAF 547
D++ A
Sbjct: 677 FADMSFAL 684
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 193/420 (45%), Gaps = 50/420 (11%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L+ C ++ L+ QIH + G N++ LL+ Y ++ A LF T++
Sbjct: 130 SVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGE 189
Query: 78 STTV-WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
V W ++ GY+++ +K++EC+R + + N +T+ +L+AC R G QV
Sbjct: 190 KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQV 249
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H ++ G+ +N++V++ LI+ YA +E AR + +GM VVSWNS
Sbjct: 250 HCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNS----------- 298
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM--RRARVEXXXXXXXXXXX 254
MI GC ++G +ALS+FG M R +++
Sbjct: 299 --------------------MIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCF 338
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
++K+ H ++ + +NNAL+ MYA G++ A +VF M +
Sbjct: 339 ALSRT-EMKIASSAHC-----LIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE 392
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+ +SWT+++ G EAL LF M V G+ PD I VL A ++
Sbjct: 393 KDVISWTALVTGNTHNGSYDEALKLFCNM-----RVGGITPDKIVTASVLSASAELTLLE 447
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G+++ + ++ G + +V + ++ G L++A+ + +M ++ + W L+ G
Sbjct: 448 FGQQVHGNYIKS-GFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR-DLITWTCLIVG 505
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 158/385 (41%), Gaps = 57/385 (14%)
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
Y S +L A KLF + +T WN +I GY +S + ++ + +M S +PN +T
Sbjct: 69 YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 118 SFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM-G 176
+L C LL GEQ+HG + G+ +V V L+ YA + +A ++F+ M G
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
+++ V+W S+L GY +Q G +A+ F +
Sbjct: 189 EKNNVTWTSMLTGY-------------------------------SQNGFAFKAIECFRD 217
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
+RR + ++G +H + ++ + ++ + +ALI MY
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQVHC-----CIVKSGFKTNIYVQSALIDMY 272
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
A C + A + M VSW SMI+ +QGL EAL +F M +D
Sbjct: 273 AKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIP 332
Query: 357 AITLIVVL-------CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
+I L + H V G + +N +VD+ ++ G +
Sbjct: 333 SILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA------------LVDMYAKRGIM 380
Query: 410 DEAHGLIENMPLKPNDALWGALLGG 434
D A + E M ++ + W AL+ G
Sbjct: 381 DSALKVFEGM-IEKDVISWTALVTG 404
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 128/275 (46%), Gaps = 15/275 (5%)
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCA 222
G V++AR +FD M +R +WN+++ Y + A ++F P++N +SW +I+G
Sbjct: 42 GRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYC 101
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
+ G +A +LF EM+ ++ L G IH + +
Sbjct: 102 KSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGH-----TIKTGF 156
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QRSTVSWTSMIMAFAKQGLGKEALGLFK 341
V + N L+ MYA C I +A +F M +++ V+WTSM+ +++ G +A+ F+
Sbjct: 157 DLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFR 216
Query: 342 TMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVD 401
+ +G + + T VL AC G ++ + ++ G I ++D
Sbjct: 217 DLRREGN-----QSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALID 270
Query: 402 LLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGC 435
+ ++ ++ A L+E M + +D + W +++ GC
Sbjct: 271 MYAKCREMESARALLEGMEV--DDVVSWNSMIVGC 303
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 223/526 (42%), Gaps = 61/526 (11%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK---LFSTIDNPSTTVWNHIIRGYA 90
Q+H + GL + ++S Y A++ +F I + WN +I +
Sbjct: 178 QVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQ 237
Query: 91 RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC---VRGGLLREGE------QVHGIVL 141
+ K++ + +M ++ GF + LL+ C + L E Q+H + +
Sbjct: 238 CCNLGKKAIGVFMRM---HSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTV 294
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
G + V T LI Y+ +L Y C +
Sbjct: 295 KSGLVTQTEVATALIKVYS------------------------EMLEDYTDC------YK 324
Query: 202 VFDEMP-IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
+F EM R++V+W +I A ++A+ LFG++R+ ++
Sbjct: 325 LFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLV 383
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
+ IH V + LNN+LIH YA CG + +VF M R VSW
Sbjct: 384 TARHALSIHAQV-----IKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSW 438
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
SM+ A++ G L +F+ M + PD+ T I +L AC HAG V+EG RIF
Sbjct: 439 NSMLKAYSLHGQVDSILPVFQKM--------DINPDSATFIALLSACSHAGRVEEGLRIF 490
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
SM P++ HY C++D+LSRA EA +I+ MP+ P+ +W ALLG C+ H N
Sbjct: 491 RSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGN 550
Query: 441 SELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
+ L + KL ++ + Y + +SNIY + + ++M V+K P SW
Sbjct: 551 TRLGKLAADKLKELVEPTNSMSY-IQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSW 609
Query: 501 IQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGA 546
+I VH+F +G +Y L +I Y P++ A
Sbjct: 610 TEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSA 655
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH---AHKLFSTIDNPSTTV-WNHIIRG 88
+Q+HS V +GL +T + T L+ Y S+ L+ +KLF + + V WN II
Sbjct: 287 LQLHSLTVKSGLVTQTEVATALIKVY--SEMLEDYTDCYKLFMEMSHCRDIVAWNGIITA 344
Query: 89 YARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN 148
+A + P +++ + Q+ + P+ +T+S +L AC R +H V+ G+ ++
Sbjct: 345 FA-VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLAD 403
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
+ +LI+ YA G ++ VFD M R VVSWNS+L Y G D VF +M I
Sbjct: 404 TVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDI 463
Query: 209 R-NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ ++ +++ C+ GR ++ L +F M
Sbjct: 464 NPDSATFIALLSACSHAGRVEEGLRIFRSM 493
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 115/550 (20%), Positives = 212/550 (38%), Gaps = 99/550 (18%)
Query: 3 IERFVPASGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITK--LLSF 57
+ F A QQ L Q+C +NL I +H ++ + N+I L++
Sbjct: 46 VSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINM 105
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
Y + +A ++F T+ + W +I GY ++ + + M+S PN FT
Sbjct: 106 YAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS-HCFPNEFTL 164
Query: 118 SFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGR----GGVEQARHVFD 173
S +L++C G+QVHG+ L G +++V +I+ Y GR +A VF+
Sbjct: 165 SSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMY-GRCHDGAAAYEAWTVFE 219
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV-VSWTTMIAGCAQKGRCKQALS 232
+ +++V+WNS++A + C A VF M V T++ C+ + +
Sbjct: 220 AIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVP 279
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
E+ + ++ V+ +V + + + AL
Sbjct: 280 --NEVSKCCLQLHSLT-----------------------VKSGLVTQTE------VATAL 308
Query: 293 IHMYAS-CGVIGDAYQVFTKMPQ-RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
I +Y+ D Y++F +M R V+W +I AFA + A+ LF +
Sbjct: 309 IKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQ----- 362
Query: 351 DGVRPDAITLIVVLCACC------HA-----------------------------GFVDE 375
+ + PD T VL AC HA G +D
Sbjct: 363 EKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDL 422
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
R+F M+ S + + M+ S G +D + + M + P+ A + ALL C
Sbjct: 423 CMRVFDDMD-----SRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSAC 477
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
E + + + +T + + ++ + A+R+ + +++I+ P
Sbjct: 478 SHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEA----EEVIKQMPMDP 533
Query: 496 PGQSWIQING 505
WI + G
Sbjct: 534 DAVVWIALLG 543
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 208/469 (44%), Gaps = 55/469 (11%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH + + + T ++S Y + A K F + +N + +GY +
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
K+ + Y+ M P+ T +L C G V+G ++ G+ S V
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHA 542
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
LIN + + A +FD CG F+ ++ VSW
Sbjct: 543 LINMFTKCDALAAAIVLFD------------------KCG--------FE----KSTVSW 572
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
M+ G G+ ++A++ F +M+ + + L++G +H + Q
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQ 632
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
Q P + N+L+ MYA CG+I + + F ++ + VSW +M+ A+A GL
Sbjct: 633 --CGFCSQTP---VGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLAS 687
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
A+ LF +M + ++PD+++ + VL AC HAG V+EG+RIF M I +E
Sbjct: 688 CAVSLFLSMQENE-----LKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVE 742
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY CMVDLL +AG EA ++ M +K + +WGALL ++H N L++ +LV +
Sbjct: 743 HYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLV-K 801
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
L+ L + Y+ +R +V V + +KK P SWI++
Sbjct: 802 LEP--------LNPSHYSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 49/330 (14%)
Query: 18 HVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK-LFSTIDN 76
++ +L+ C N + L+Q+H ++++GL +I F Q Q + +F ++ +
Sbjct: 7 NLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLF-----QRQDLSRVIFDSVRD 61
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQ 135
P +WN +IRGY R+ +++ + M + +P+ ++++F L AC ++G +
Sbjct: 62 PGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLR 121
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H ++ G S+V++ T L+ Y +AR D
Sbjct: 122 IHDLIAEMGLESDVYIGTALVEMYC------KAR-------------------------D 150
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
AR+VFD+M +++VV+W TM++G AQ G AL LF +MR V+
Sbjct: 151 LVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
Query: 256 XXXXGDLKLGRWIHWYVQQR--IVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
+ R +H V ++ I A ++ LI MY +C + A VF ++
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKGFIFA---------FSSGLIDMYCNCADLYAAESVFEEVW 261
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
++ SW +M+ A+A G +E L LF M
Sbjct: 262 RKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/503 (20%), Positives = 196/503 (38%), Gaps = 87/503 (17%)
Query: 16 QQHVFTL-LQSCN---NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
++ FT L++C + + ++IH + GL I T L+ Y + L A ++F
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVF 158
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
+ WN ++ G A++ ++ + M S + + + L+ A +
Sbjct: 159 DKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSD 218
Query: 132 EGEQVHGIVLVKG------------YCS--------NVFVET---------NLINFYAGR 162
+HG+V+ KG YC+ +VF E ++ YA
Sbjct: 219 VCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHN 278
Query: 163 GGVEQARHVFDGM-----------------------------------------GQRSVV 181
G E+ +FD M G SV
Sbjct: 279 GFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVA 338
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
+ S+++ Y CG+ + A ++F + R+VVSW+ MIA Q G+ +A+SLF +M R
Sbjct: 339 T--SLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH 396
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
++ +LG+ IH Y + + + + A+I MYA CG
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADI-----ESELETATAVISMYAKCGR 451
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
A + F ++P + V++ ++ + + G +A ++K M + GV PD+ T++
Sbjct: 452 FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM-----KLHGVCPDSRTMV 506
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
+L C G ++ + + G ++++ ++ L A L +
Sbjct: 507 GMLQTCAFCSDYARGSCVYGQIIKH-GFDSECHVAHALINMFTKCDALAAAIVLFDKCGF 565
Query: 422 KPNDALWGALLGGCQIHKNSELA 444
+ + W ++ G +H +E A
Sbjct: 566 EKSTVSWNIMMNGYLLHGQAEEA 588
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+ +HS ++ G +T + L+ Y ++ + K F I N WN ++ YA
Sbjct: 624 MSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAH 683
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
+V + M E +P+ ++ +LSAC GL+ EG+++
Sbjct: 684 GLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 195/435 (44%), Gaps = 17/435 (3%)
Query: 5 RFVPASGRRSIQQHVFTLLQSCN---NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS 61
R + G R+ + +L+SC +++ L Q+H VV G S ++ T ++ Y
Sbjct: 151 RRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKC 210
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
+ A ++F I NPS WN I+R Y ++V + +M+ P T S ++
Sbjct: 211 RVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVM 270
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
AC R L G+ +H I + ++ V T++ + Y +E AR VFD + +
Sbjct: 271 LACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLK 330
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
SW S ++GY G AR +FD MP RN+VSW M+ G +AL MR+
Sbjct: 331 SWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEI 390
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
D+++G+ H ++ R+ +V + NAL+ MY CG
Sbjct: 391 ENIDNVTLVWILNVCSGISDVQMGKQAHGFIY-----RHGYDTNVIVANALLDMYGKCGT 445
Query: 302 IGDAYQVFTKMPQ-RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
+ A F +M + R VSW +++ A+ G ++AL F+ M + +P TL
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA------KPSKYTL 499
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
+L C + ++ G+ I + R G + G MVD+ S+ D A + +
Sbjct: 500 ATLLAGCANIPALNLGKAIHGFLIRD-GYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAA 558
Query: 421 LKPNDALWGALLGGC 435
+ + LW +++ GC
Sbjct: 559 TR-DLILWNSIIRGC 572
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 191/442 (43%), Gaps = 49/442 (11%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
+ VF + C+ +++ ++ Q S+ T +S Y S + A +LF +
Sbjct: 300 VSTSVFDMYVKCDRLESARRVFDQT----RSKDLKSWTSAMSGYAMSGLTREARELFDLM 355
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEP-NGFTYSFLLSACVRGGLLREG 133
+ WN ++ GY +H W + ++ E E + T ++L+ C ++ G
Sbjct: 356 PERNIVSWNAMLGGYVHAH-EWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG 414
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
+Q HG + GY +NV V L++ Y C
Sbjct: 415 KQAHGFIYRHGYDTNVIVANALLDMYG-------------------------------KC 443
Query: 194 GDFDGARRVFDEMP-IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
G A F +M +R+ VSW ++ G A+ GR +QALS F M+ +
Sbjct: 444 GTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATL 502
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
L LG+ IH ++ R+ + V + A++ MY+ C A +VF +
Sbjct: 503 LAGCANIPALNLGKAIHGFL-----IRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEA 557
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
R + W S+I + G KE LF + ++G V+PD +T + +L AC G
Sbjct: 558 ATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEG-----VKPDHVTFLGILQACIREGH 612
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
V+ G + F+SM+ + ISP++EHY CM++L + G L + + MP P + +
Sbjct: 613 VELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRIN 672
Query: 433 GGCQIHKNSELASVVEPKLVAE 454
CQ ++ S+L + +L+ +
Sbjct: 673 DACQRYRWSKLGAWAAKRLMND 694
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 177/433 (40%), Gaps = 28/433 (6%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L +SC++ ++Q + S +V ++ + + Y + A +LF +
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN +I A++ + +R+M +++ +L +C LR Q+H
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHC 186
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V+ GY NV +ET++++ Y + AR VFD + S VSWN I+ Y+ G D
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDE 246
Query: 199 ARRVFDEM------PIRNVVSWTTMIAGCAQKGRCKQALSL-FGEMRRARVEXXXXXXXX 251
A +F +M P+ + VS + M+A C ++L+L G++ A
Sbjct: 247 AVVMFFKMLELNVRPLNHTVS-SVMLA-------CSRSLALEVGKVIHAIAVKLSVVADT 298
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
+K R R V + ++ + + YA G+ +A ++F
Sbjct: 299 VVSTSVFDMYVKCDR----LESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDL 354
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
MP+R+ VSW +M+ + EAL M + +D V TL+ +L C
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNV-----TLVWILNVCSGIS 409
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
V G++ + R G + ++D+ + G L A+ M ++ W AL
Sbjct: 410 DVQMGKQAHGFIYRH-GYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 432 LGGCQIHKNSELA 444
L G SE A
Sbjct: 469 LTGVARVGRSEQA 481
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 214/483 (44%), Gaps = 44/483 (9%)
Query: 34 QIHSQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
QIH + +G+S+ ++ ++ Y +A +F T+++ WN +I + S
Sbjct: 154 QIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDS 213
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+++ + M E +P+ +T S ++S C L +G+Q + + G+ SN V
Sbjct: 214 GNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVL 273
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
I+ ++ ++ + +F R + W+S+L C G+
Sbjct: 274 GAGIDMFSKCNRLDDSVKLF-----RELEKWDSVL-----CNSMIGS------------Y 311
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
SW C + L++ +R + D+
Sbjct: 312 SWHC----CGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADV---------- 357
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+V + + +L+ MY G + A VF K + + W ++IM A+
Sbjct: 358 -HSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSR 416
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
E+L +F ++ + + ++PD +TL+ +L ACC+AGFV+EG +IF+SM + G++P
Sbjct: 417 AVESLAIFNQLLMNQS----LKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPG 472
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
EHY C+++LL R G ++EA + + +P +P+ +W +L ++ LA V K +
Sbjct: 473 NEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV-AKTM 531
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
E + + YLVL+ IY RW++ + +R M E +K G S I I V F A
Sbjct: 532 LESEPKSSFPYLVLI-KIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Query: 513 GDM 515
+
Sbjct: 591 DQL 593
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 14/327 (4%)
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
P+ +S L++ + + VH +L G+ + + Y G V A +
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
FD + ++ ++WN L G G + A +FDEMP R+VVSW TMI+G G + +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
+F +M+R + ++ G IH + + ++ + N+
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTC---VRHGEQIH----GNAICSGVSRYNLVVWNS 174
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
++ MY GV A VF M R VSW +I++ + G + AL F M
Sbjct: 175 VMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE-----M 229
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
++PD T+ +V+ C + +G++ A + +S I G +D+ S+ LD+
Sbjct: 230 EIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV-LGAGIDMFSKCNRLDD 288
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIH 438
+ L + K + L +++G H
Sbjct: 289 SVKLFRELE-KWDSVLCNSMIGSYSWH 314
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 147/378 (38%), Gaps = 79/378 (20%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS-- 92
+H+Q++ G + T + L Y S + +A +LF I + +T WN ++G ++
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 93 ---------HTPWKSVECYRQMVST--------------------EAEPNGFTYSFL--L 121
P + V + M+S E P FT+S L L
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
CV R GEQ+HG CS G+ + ++V
Sbjct: 146 VTCV-----RHGEQIHG----NAICS--------------------------GVSRYNLV 170
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
WNS++ Y G FD A VF M R+VVSW +I C+ G + AL F MR
Sbjct: 171 VWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREME 230
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
++ +L G+ + S+ L A I M++ C
Sbjct: 231 IQPDEYTVSMVVSICSDLRELSKGK----QALALCIKMGFLSNSIVL-GAGIDMFSKCNR 285
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
+ D+ ++F ++ + +V SMI +++ G++AL LF A VRPD T
Sbjct: 286 LDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFIL-----AMTQSVRPDKFTFS 340
Query: 362 VVLCACCHAGFVDEGRRI 379
VL + +A +D G +
Sbjct: 341 SVL-SSMNAVMLDHGADV 357
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 194/429 (45%), Gaps = 54/429 (12%)
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
T WN +I G A S +S+ ++ M REG+ H +
Sbjct: 546 TSWNSVISGCASSGHHLESLRAFQAMS------------------------REGKIRHDL 581
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW-----NSILAGYVSCG 194
+ + G I+ G V Q R F G+ +S+ N+++ Y C
Sbjct: 582 ITLLG----------TISASGNLGLVLQGR-CFHGLAIKSLRELDTQLQNTLITMYGRCK 630
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
D + A +VF + N+ SW +I+ +Q ++ LF R ++E
Sbjct: 631 DIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF---RNLKLEPNEITFVGLLS 687
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G G H ++ +R Q P V + AL+ MY+SCG++ +VF
Sbjct: 688 ASTQLGSTSYGMQAHCHLIRRGF---QANPFV--SAALVDMYSSCGMLETGMKVFRNSGV 742
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
S +W S+I A G+G++A+ LFK + S+ + P+ + I +L AC H+GF+D
Sbjct: 743 NSISAWNSVISAHGFHGMGEKAMELFKELSSNSE----MEPNKSSFISLLSACSHSGFID 798
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
EG + M +G+ P EH +VD+L RAG L EA+ I + +WGALL
Sbjct: 799 EGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSA 858
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C H +++L V +++ E++ D A+ Y + L+N Y W++ + +R+ + + +KK
Sbjct: 859 CNYHGDTKLGKEV-AEVLFEMEPDNAS-YYISLANTYVGLGGWEEAVRLRKMVEDNALKK 916
Query: 495 PPGQSWIQI 503
PG S I +
Sbjct: 917 LPGYSVIDV 925
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 166/404 (41%), Gaps = 61/404 (15%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H + GL +++ L++ Y + L A +F+ +++ WN I+ +
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
P KS++ ++ M + E + T+S ++SAC L GE +HG+V+ GY V
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
NSI++ Y CGD + A VF+E+ R+V+S
Sbjct: 330 -----------------------------NSIISMYSKCGDTEAAETVFEELVCRDVISS 360
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKL---GRWIHWY 271
++ G A G ++A + +M+ V+ GDL GR +H Y
Sbjct: 361 NAILNGFAANGMFEEAFGILNQMQS--VDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
V Q ++ + N++I MY CG+ A +F R VSW SMI AF++ G
Sbjct: 419 T----VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
+A LFK +VS+ + T++ +L +C + + IF W
Sbjct: 475 FTHKAKNLFKEVVSE---YSCSKFSLSTVLAILTSCDSSDSL-----IFGKSVHCW---- 522
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
L + G L A +E M + W +++ GC
Sbjct: 523 -----------LQKLGDLTSAFLRLETMSETRDLTSWNSVISGC 555
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 150/385 (38%), Gaps = 38/385 (9%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+H + GL Q +KLL+FY + +L + LF + VWN +I ++
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+V + +M+ E + T SA L R+ +H + + G + +
Sbjct: 168 RYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCN 227
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
L+N YA + A VF M R +VSWN+I+
Sbjct: 228 ALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIM-------------------------- 261
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
C G +++L F M + E +L LG +H V
Sbjct: 262 -----TKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLV- 315
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
I + + V + N++I MY+ CG A VF ++ R +S +++ FA G+
Sbjct: 316 --IKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMF 373
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+EA G+ M S VD ++PD T++ + C F EGR + R S +
Sbjct: 374 EEAFGILNQMQS----VDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRAL 429
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIEN 418
E ++D+ + G +A L +
Sbjct: 430 EVINSVIDMYGKCGLTTQAELLFKT 454
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 3 IERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQK------TNIITKLLS 56
+ F S I+ + TLL + + NL + +GL+ K T + L++
Sbjct: 565 LRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLIT 624
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
Y ++ A K+F I +P+ WN +I +++ + + +R + + EPN T
Sbjct: 625 MYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEIT 681
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+ LLSA + G G Q H ++ +G+ +N FV L++ Y+ G +E VF G
Sbjct: 682 FVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSG 741
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQAL 231
S+ +WNS+++ + G + A +F E+ N S+ ++++ C+ G + L
Sbjct: 742 VNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGL 801
Query: 232 SLFGEMRR 239
S + +M
Sbjct: 802 SYYKQMEE 809
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 196/438 (44%), Gaps = 51/438 (11%)
Query: 2 LIERFVPASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNII--TKLLS 56
L E +V R + ++ LL C+ Q+H +V G+ N+I + L+
Sbjct: 170 LFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG---NLIVESSLVY 226
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
FY +L A + F ++ W +I +R K++ + M++ PN FT
Sbjct: 227 FYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFT 286
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+L AC LR G QVH +V+ + ++VFV T+L++ YA
Sbjct: 287 VCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYA---------------- 330
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
CG+ R+VFD M RN V+WT++IA A++G ++A+SLF
Sbjct: 331 ---------------KCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRI 375
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M+R + G L LG+ +H + +N + +V + + L+ +Y
Sbjct: 376 MKRRHLIANNLTVVSILRACGSVGALLLGKELHAQI-----IKNSIEKNVYIGSTLVWLY 430
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
CG DA+ V ++P R VSWT+MI + G EAL K M+ +G V P+
Sbjct: 431 CKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEG-----VEPN 485
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
T L AC ++ + GR I + + +S + ++ + ++ GF+ EA +
Sbjct: 486 PFTYSSALKACANSESLLIGRSIHSIAKKNHALS-NVFVGSALIHMYAKCGFVSEAFRVF 544
Query: 417 ENMPLKPNDALWGALLGG 434
++MP K N W A++ G
Sbjct: 545 DSMPEK-NLVSWKAMIMG 561
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 153/336 (45%), Gaps = 39/336 (11%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L++C+ + L Q+HS VV + + T L+ Y ++ K+F +
Sbjct: 287 VCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS 346
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
N +T W II +AR +++ +R M N T +L AC G L G++
Sbjct: 347 NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKE 406
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H ++ NV++ + L+ W Y CG+
Sbjct: 407 LHAQIIKNSIEKNVYIGSTLV--------------------------WL-----YCKCGE 435
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
A V ++P R+VVSWT MI+GC+ G +AL EM + VE
Sbjct: 436 SRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKA 495
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L +GR IH I +N +V + +ALIHMYA CG + +A++VF MP++
Sbjct: 496 CANSESLLIGRSIH-----SIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEK 550
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
+ VSW +MIM +A+ G +EAL L M ++G VD
Sbjct: 551 NLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVD 586
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 45/414 (10%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVW 82
LQS N ++ + +IH+ + Q L+S + L +A K+F ++ +T W
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTW 151
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAE-PNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
+I GY + ++ + V N + LL+ C R G QVHG +
Sbjct: 152 TAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHG-NM 210
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
VK N+ VE++L+ FYA CG+ A R
Sbjct: 211 VKVGVGNLIVESSLVYFYA-------------------------------QCGELTSALR 239
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD 261
FD M ++V+SWT +I+ C++KG +A+ +F M
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA 299
Query: 262 LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWT 321
L+ GR +H V +R++ + V + +L+ MYA CG I D +VF M R+TV+WT
Sbjct: 300 LRFGRQVHSLVVKRMI-----KTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWT 354
Query: 322 SMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
S+I A A++G G+EA+ LF+ M + + +T++ +L AC G + G+ + A
Sbjct: 355 SIIAAHAREGFGEEAISLFRIMKR-----RHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 382 SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
+ + I + +V L + G +A +++ +P + + W A++ GC
Sbjct: 410 QIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGC 461
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 264 LGRWIHWYVQQRIVARNQQQPSVRLNNALIH----MYASCGVIGD---AYQVFTKMPQRS 316
L W+ R++ R ++ +I+ + +SC +GD A +VF MP+++
Sbjct: 88 LAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKN 147
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
TV+WT+MI + K GL EA LF+ V G R + +L C + G
Sbjct: 148 TVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNER----MFVCLLNLCSRRAEFELG 203
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGC 435
R++ +M + G+ I +V ++ G L A + M K D + W A++ C
Sbjct: 204 RQVHGNMVKV-GVGNLIVE-SSLVYFYAQCGELTSALRAFDMMEEK--DVISWTAVISAC 259
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 185/470 (39%), Gaps = 82/470 (17%)
Query: 18 HVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+VF + ++ ++ H+ + NGL + T L+ Y ++ A ++F I
Sbjct: 219 NVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER 278
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQV 136
VW +I G A + W+++ +R M+S E PN + +L L+ G++V
Sbjct: 279 DIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 137 HGIVL---------------VKGYCS-----------------NVFVETNLINFYAGRGG 164
H VL + YC N T L++ YA G
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGR 398
Query: 165 VEQARHVFDGMGQR---------------------------------------SVVSWNS 185
+QA M Q +V S
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTS 458
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
++ Y CG + R+FD + RNV +WT MI + + + +F M ++
Sbjct: 459 LMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPD 518
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
LKLG+ +H ++ ++ + P V + +I MY CG + A
Sbjct: 519 SVTMGRVLTVCSDLKALKLGKELHGHILKK---EFESIPFV--SARIIKMYGKCGDLRSA 573
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
F + + +++WT++I A+ L ++A+ F+ MVS G P+ T VL
Sbjct: 574 NFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRG-----FTPNTFTFTAVLS 628
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
C AGFVDE R F M R + + P EHY +++LL+R G ++EA L
Sbjct: 629 ICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 165/367 (44%), Gaps = 52/367 (14%)
Query: 22 LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LL++C ++L+ Q+H + +NGL + TKL+ Y A ++ A K+F + +
Sbjct: 117 LLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSN 176
Query: 79 TTVWNHIIRGYARS-HTPWKSV-ECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
WN ++RG S ++ V + +M + N ++ S + + LR+G +
Sbjct: 177 VYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT 236
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H + + G ++VF++T+L++ Y CG
Sbjct: 237 HALAIKNGLFNSVFLKTSLVDMY-------------------------------FKCGKV 265
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
ARRVFDE+ R++V W MIAG A R +AL LF M E
Sbjct: 266 GLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM--ISEEKIYPNSVILTTIL 323
Query: 257 XXXGD---LKLGRWIHWYVQQRIVARNQ-QQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
GD LKLG+ +H +V + ++N +QP V ++ LI +Y CG + +VF
Sbjct: 324 PVLGDVKALKLGKEVHAHV---LKSKNYVEQPFV--HSGLIDLYCKCGDMASGRRVFYGS 378
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
QR+ +SWT+++ +A G +AL M +G RPD +T+ VL C
Sbjct: 379 KQRNAISWTALMSGYAANGRFDQALRSIVWMQQ-----EGFRPDVVTIATVLPVCAELRA 433
Query: 373 VDEGRRI 379
+ +G+ I
Sbjct: 434 IKQGKEI 440
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 139/325 (42%), Gaps = 45/325 (13%)
Query: 113 NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVF 172
N T+S LL ACVR L G+QVH + + G SN F+ T L++ Y
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYT------------ 157
Query: 173 DGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGC--AQKGRCKQA 230
+CG A++VFDE NV SW ++ G + K R +
Sbjct: 158 -------------------ACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDV 198
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNN 290
LS F EMR V+ L+ G H + +N SV L
Sbjct: 199 LSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHA-----LAIKNGLFNSVFLKT 253
Query: 291 ALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
+L+ MY CG +G A +VF ++ +R V W +MI A EALGLF+TM+S+
Sbjct: 254 SLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISE---- 309
Query: 351 DGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLD 410
+ + P+++ L +L + G+ + A + ++ + + ++DL + G D
Sbjct: 310 EKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCG--D 367
Query: 411 EAHGLIENMPLKPNDAL-WGALLGG 434
A G K +A+ W AL+ G
Sbjct: 368 MASGRRVFYGSKQRNAISWTALMSG 392
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 209/471 (44%), Gaps = 59/471 (12%)
Query: 34 QIHSQVVLNGLSQKTNIITKLL-SFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
Q+HS VV +G + + +L +Y A L + + F+ + WN I+ A
Sbjct: 234 QLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADY 293
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGY-CSNVFV 151
+ S++ + +M P+ + L+ C R ++ G+Q+H VL G+ S++ V
Sbjct: 294 GSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHV 353
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVF----DEMP 207
++ LI+ Y G+E + ++ + ++ NS++ + CG +F DE
Sbjct: 354 QSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGT 413
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
+ V+ +T++ +ALSL L
Sbjct: 414 GIDEVTLSTVL----------KALSL-----------------------------SLPES 434
Query: 268 IHWYVQQRIVA-RNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
+H A ++ V ++ +LI Y G + +VF ++ + TS+I
Sbjct: 435 LHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIING 494
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
+A+ G+G + + + + M + PD +T++ VL C H+G V+EG IF S+
Sbjct: 495 YARNGMGTDCVKMLREM-----DRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESK 549
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASV 446
+GISP + Y CMVDLL RAG +++A L+ + W +LL C+IH+N +
Sbjct: 550 YGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRR 609
Query: 447 VEPKLVAELDTDGAAGYLVLLSNIY------AFAKRWQDVIAVRQKMIEMG 491
+++ L+ + A Y + +S Y +++ +++ A R+ M E+G
Sbjct: 610 A-AEVLMNLEPENFAVY-IQVSKFYFEIGDFEISRQIREIAASRELMREIG 658
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 140/322 (43%), Gaps = 36/322 (11%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
IQ+H +V+ G + + L+ Y + A KLF + + + V N ++R + ++
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQT 191
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGY-CSNVFV 151
+ E Y +M NG TY +++ C L+ EG+Q+H +V+ G+ SN+FV
Sbjct: 192 GESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFV 251
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
L+++Y+ G + + F+ + ++ V+SWNSI
Sbjct: 252 ANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSI------------------------- 286
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
++ CA G +L LF +M+ D++ G+ IH Y
Sbjct: 287 ------VSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCY 340
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
V + S+ + +ALI MY C I ++ ++ +P + S++ + G
Sbjct: 341 V----LKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCG 396
Query: 332 LGKEALGLFKTMVSDGAGVDGV 353
+ K+ + +F M+ +G G+D V
Sbjct: 397 ITKDIIEMFGLMIDEGTGIDEV 418
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 160/389 (41%), Gaps = 52/389 (13%)
Query: 59 IASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYS 118
I S L AH+ F + +N +I G +R +++E Y +MVS + T+
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 119 FLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
+LS C REG QVH V+ G+ N+FV + L+ YA V+ A +FD M R
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPI----RNVVSWTTMIAGCAQKGRCKQALSLF 234
++ N +L + G+ V+ M + +N +++ MI GC+
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHD---------- 226
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
R E G+ +H V V ++ + N L+
Sbjct: 227 ----RLVYE---------------------GKQLHSLV----VKSGWNISNIFVANVLVD 257
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
Y++CG + + + F +P++ +SW S++ A G ++L LF M G R
Sbjct: 258 YYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM-----QFWGKR 312
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
P + L C + G++I + + + ++D+ + ++ +
Sbjct: 313 PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL 372
Query: 415 LIENMP---LKPNDALWGALLGGCQIHKN 440
L +++P L+ ++L +L+ C I K+
Sbjct: 373 LYQSLPCLNLECCNSLMTSLM-HCGITKD 400
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 9/180 (5%)
Query: 289 NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
N+ L+ MY++CG+ +A VF KM +++ +W +I FAK G G++A+ +F +G
Sbjct: 292 NHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGN 351
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
PD + AC G VDEG F SM+R +GI+P IE Y +V++ + GF
Sbjct: 352 -----IPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 409 LDEAHGLIENMPLKPNDALWGALLGGCQIHKNSEL----ASVVEPKLVAELDTDGAAGYL 464
LDEA +E MP++PN +W L+ ++H N EL A VVE L+ G++
Sbjct: 407 LDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFI 466
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 160/347 (46%), Gaps = 28/347 (8%)
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
++ +I Y RS +++ + M PN TY+ ++ AC +GG+ E +QV
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM--EFKQVAKFF 327
Query: 141 --LVKGYCSNVFVETNLINFYAGRGGV-EQARHVFDGMGQR----SVVSWNSILAGYVSC 193
+ + + N + RGG+ E AR++FD M R V S+N++L
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 194 GDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
G D A + +MP++ NVVS++T+I G A+ GR +AL+LFGEMR +
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
K+GR R +A + V NAL+ Y G + +VF
Sbjct: 448 NTLLSIYT-----KVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 310 TKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
T+M + + ++++++I ++K GL KEA+ +F+ S G+R D + ++
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS-----AGLRADVVLYSALID 557
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
A C G V + M + GISP + Y ++D R+ +D +
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRS 603
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 198/458 (43%), Gaps = 53/458 (11%)
Query: 46 QKTNIITKLLSFYIASDQLQHA----------HKLFSTIDNP--STTVWNHIIRGYARSH 93
QKT + T+ S A D LQ+A H L + ++ + +IIR +
Sbjct: 153 QKTTMATRHSS--AAEDALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTYIIRELGNRN 210
Query: 94 TPWKSVECYRQMVSTEAEPN--GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
K+V Y V E N G S ++S R G + +++ GY + V+
Sbjct: 211 ECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYA 270
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQ----RSVVSWNSILAGYVSCG----DFDGARRVF 203
+ LI+ Y G E+A VF+ M + ++V++N+++ +CG +F + F
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID---ACGKGGMEFKQVAKFF 327
Query: 204 DEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
DEM V +++ +++A C++ G + A +LF EM R+E
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP----QR 315
G + L I + Q V R P+V + +I +A G +A +F +M
Sbjct: 388 GQMDLAFEI---LAQMPVKR--IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
VS+ +++ + K G +EAL + + M S G++ D +T +L G DE
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMAS-----VGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALL 432
+++F M R + P + Y ++D S+ G EA + L+ + L+ AL+
Sbjct: 498 VKKVFTEMKREH-VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNI 470
+ KN + S V L+ E+ +G + +V ++I
Sbjct: 557 DA--LCKNGLVGSAV--SLIDEMTKEGISPNVVTYNSI 590
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 290 NALIHMYASCGVIGDAYQVFTKMPQ----RSTVSWTSMIMAFAKQGLG-KEALGLFKTMV 344
+ALI Y G+ +A VF M + + V++ ++I A K G+ K+ F M
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 345 SDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASM-NRTWGISPRIEHYGCMVDLL 403
+G V+PD IT +L C G + R +F M NR I + Y ++D +
Sbjct: 332 RNG-----VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR--IEQDVFSYNTLLDAI 384
Query: 404 SRAGFLDEAHGLIENMPLK---PNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGA 460
+ G +D A ++ MP+K PN + ++ G K + L E+ G
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG--FAKAGRFDEAL--NLFGEMRYLGI 440
Query: 461 A----GYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
A Y LLS IY R ++ + + ++M +G+KK
Sbjct: 441 ALDRVSYNTLLS-IYTKVGRSEEALDILREMASVGIKK 477
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 187/440 (42%), Gaps = 75/440 (17%)
Query: 42 NGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID----NPSTTVWNHIIRGYARSHTPWK 97
+G S T L+S + S + + A +F ++ P+ +N I+ + + TPW
Sbjct: 202 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261
Query: 98 SVECY-RQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLI 156
+ +M S P+ +TY+ L++ C RG L +E QV + G+ + L+
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 157 NFYAGRGGVEQARHVFDGM----GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR--- 209
+ Y ++A V + M S+V++NS+++ Y G D A + ++M +
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 210 -NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
+V ++TT+++G + G+ + A+S+F EMR A
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC-------------------------- 415
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP----QRSTVSWTSMI 324
+P++ NA I MY + G + ++F ++ V+W +++
Sbjct: 416 --------------KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 325 MAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMN 384
F + G+ E G+FK M G P+ T ++ A G ++ ++ M
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKR-----AGFVPERETFNTLISAYSRCGSFEQAMTVYRRM- 515
Query: 385 RTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALL----GGCQI 437
G++P + Y ++ L+R G +++ ++ M KPN+ + +LL G +I
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 438 HKNSELAS-----VVEPKLV 452
LA V+EP+ V
Sbjct: 576 GLMHSLAEEVYSGVIEPRAV 595
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 170/368 (46%), Gaps = 28/368 (7%)
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
+N ++ Y +SH P ++++ +MV P+ TY+ L+SA R G+L E ++ +
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG----QRSVVSWNSILAGYVSCGDF 196
KG +VF T L++ + G VE A +F+ M + ++ ++N+ + Y + G F
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 197 DGARRVFDEMPI----RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
++FDE+ + ++V+W T++A Q G + +F EM+RA
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G + ++ + V P + N ++ A G+ + +V +M
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVT-----PDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 313 P----QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD-GAGVDGVRPDAITLIVVLCAC 367
+ + +++ S++ A+A GKE +GL ++ + +GV + P A+ L ++ C
Sbjct: 551 EDGRCKPNELTYCSLLHAYAN---GKE-IGLMHSLAEEVYSGV--IEPRAVLLKTLVLVC 604
Query: 368 CHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPN 424
+ E R F+ + + G SP I MV + R + +A+G+++ M P+
Sbjct: 605 SKCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 425 DALWGALL 432
A + +L+
Sbjct: 664 MATYNSLM 671
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/534 (20%), Positives = 199/534 (37%), Gaps = 97/534 (18%)
Query: 30 QNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID----NPSTTVWNHI 85
Q Q+ ++ G S LL Y S + + A K+ + + +PS +N +
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 86 IRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGY 145
I YAR +++E QM +P+ FTY+ LLS R G + + + G
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 146 CSNVFVETNLINFYAGRGGVEQARHVFDGMG----QRSVVSWNSILA------------- 188
N+ I Y RG + +FD + +V+WN++LA
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 189 ----------------------GYVSCGDFDGA----RRVFDEMPIRNVVSWTTMIAGCA 222
Y CG F+ A RR+ D ++ ++ T++A A
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
+ G +Q+ + EM R + ++ L + V ++
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI----- 590
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALG 338
+P L L+ + + C ++ +A + F+++ +R + SM+ + ++ + +A G
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650
Query: 339 LFKTMVSDGAG------------------------------VDGVRPDAITLIVVLCACC 368
+ M G G++PD I+ V+ A C
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM---PLKPND 425
+ + RIF+ M R GI P + Y + + +EA G++ M +PN
Sbjct: 711 RNTRMRDASRIFSEM-RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 426 ALWGALLGG-CQIHKNSELASVVEPKLVAELDTDGAAGY-LVLLSNIYAFAKRW 477
+ +++ G C++++ E VE + LD G L LL I K+W
Sbjct: 770 NTYNSIVDGYCKLNRKDEAKLFVED--LRNLDPHAPKGEDLRLLERI---VKKW 818
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 201/452 (44%), Gaps = 58/452 (12%)
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
Y+ LL++ R GL+ E +QV+ +L C N++ ++N Y G VE+A +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 177 QRSV----VSWNSILAGYVSCGDFDGARRVFDEMPI----RNVVSWTTMIAGCAQKGRCK 228
+ + ++ S++ GY D D A +VF+EMP+ RN V++T +I G R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 229 QALSLFGEMRRAR----VEXXXXXXXXXXXXXXXXGDLKLGRW---------IHWYV--- 272
+A+ LF +M+ V L L + IH Y
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 273 -----------QQRIVARNQQQ---PSVRLNNALIHMYASCGVIGDAYQVFTKMPQR--- 315
+ ++ + ++ P+V NALI+ Y G+I DA V M R
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 316 -STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+T ++ +I + K + K A+G+ M+ V PD +T ++ C +G D
Sbjct: 426 PNTRTYNELIKGYCKSNVHK-AMGVLNKMLE-----RKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK---PNDALWGAL 431
R+ + MN G+ P Y M+D L ++ ++EA L +++ K PN ++ AL
Sbjct: 480 SAYRLLSLMN-DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 432 LGG-CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
+ G C+ K E ++E K++++ + + L+ + A K ++ + +KM+++
Sbjct: 539 IDGYCKAGKVDEAHLMLE-KMLSKNCLPNSLTFNALIHGLCADGK-LKEATLLEEKMVKI 596
Query: 491 GVKKPPGQSWIQINGVVHDFVAGDMTHKHSYF 522
G++ I I+ ++ D GD H +S F
Sbjct: 597 GLQPTVSTDTILIHRLLKD---GDFDHAYSRF 625
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 206/526 (39%), Gaps = 77/526 (14%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVWN 83
++ + ++ +++ L G + T L+ + ++ A LF + + P+ +
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 84 HIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVK 143
+I+ S +++ ++M T +PN TY+ L+ + + ++ G +L K
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 144 GYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR------------------------- 178
G NV LIN Y RG +E A V + M R
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM 447
Query: 179 -------------SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV----SWTTMIAGC 221
VV++NS++ G G+FD A R+ M R +V ++T+MI
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 222 AQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQ 281
+ R ++A LF + + V G K G+ ++ +
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVN-----PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 282 QQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ---RSTVSW-TSMIMAFAKQGLGKEAL 337
P+ NALIH + G + +A + KM + + TVS T +I K G A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG 397
F+ M+S G +PDA T + C G + + + A M R G+SP + Y
Sbjct: 623 SRFQQMLSSGT-----KPDAHTYTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYS 676
Query: 398 CMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDT 457
++ G + A +++ M D GC+ +++ L+ + +
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRM----RDT-------GCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 458 DGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
G+ L +SN+ F V+ + +KM+E V P +S+ ++
Sbjct: 726 KGSEPELCAMSNMMEF----DTVVELLEKMVEHSV-TPNAKSYEKL 766
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/417 (18%), Positives = 159/417 (38%), Gaps = 71/417 (17%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
+L + KL +P+T +N +I+GY +S+ K++ +M+ + P+ TY+ L+
Sbjct: 417 ELMESRKL-----SPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR---- 178
R G ++ ++ +G + + T++I+ VE+A +FD + Q+
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV----SWTTMIAGCAQKGRCKQALSLF 234
+VV + +++ GY G D A + ++M +N + ++ +I G G+ K+A L
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
+M + ++ LK G + H Y + + + + +P I
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRL-----LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 295 MYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
Y G + DA + KM + +++S+I + G A + K M G
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 351 D------------------------------------------------GVRPDAITLIV 362
V P+A +
Sbjct: 706 SQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 363 VLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
++ C G + ++F M R GISP + ++ + +EA ++++M
Sbjct: 766 LILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 115/257 (44%), Gaps = 31/257 (12%)
Query: 290 NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
NA+I MY+ C + DA +VF +MP+ ++ + M+ F G G+EA+ LF +G
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN- 216
Query: 350 VDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
+P+ V C G V EG F +M R +GI P +EHY + +L+ +G L
Sbjct: 217 ----KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 410 DEAHGLIENMPLKPNDALWGALLGGCQIHKNSEL----ASVVEPKLVAELDTDGAAGYLV 465
DEA +E MP++P+ +W L+ ++H + EL A +VE LD +AG +
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVSSAGLV- 331
Query: 466 LLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYE 525
A + D + K+P +S F D +H IYE
Sbjct: 332 --------ATKASDFVK----------KEPSTRSEPYFYST---FRPVDSSHPQMNIIYE 370
Query: 526 ILSEIIKQSHVDSYEPD 542
L + Q Y PD
Sbjct: 371 TLMSLRSQLKEMGYVPD 387
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
+LNN +I M+ C I DA +VF M + SW M+ A++ G+G +AL LF+ M
Sbjct: 272 KLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKH 331
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
G ++P+ T + V AC G ++E F SM GISP+ EHY ++ +L +
Sbjct: 332 G-----LKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKC 386
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGA 460
G L EA I ++P +P W A+ ++H + +L +E +L+ ++D A
Sbjct: 387 GHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYME-ELMVDVDPSKA 439
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 219/509 (43%), Gaps = 48/509 (9%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI----DNPSTTVWNHIIRGY 89
++ SQ + G+ + + + Y+ S L A ++ + +P+ + +I+G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 90 ARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNV 149
+ +++ Y Q++ EP+ TYS L+ + G LR G ++ ++ GY +V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 150 FVETNLINFYAGRGGVEQA-RHVFDGMGQR---SVVSWNSILAGYVSCGDFDGARRVFDE 205
+ L++ + +G + A R +GQ +VV +NS++ G+ FD A +VF
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 206 MPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD 261
M I +V ++TT++ +GR ++AL LF M + +E
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 262 LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM----PQRST 317
+G + +Q RN+ + + N +IH+ C I DA + F + +
Sbjct: 582 PTIGLQLFDLMQ-----RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
V++ +MI + EA +F+ + G P+ +TL +++ C +D
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFG-----PNTVTLTILIHVLCKNNDMDGAI 691
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK---PNDALWGALLGG 434
R+F+ M G P YGC++D S++ ++ + L E M K P+ + ++ G
Sbjct: 692 RMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 435 -CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
C+ + E ++ + A+L D A Y +L+ Y R + + + M+ GVK
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVA-YAILIRG-YCKVGRLVEAALLYEHMLRNGVK 808
Query: 494 ------------KPPGQSWIQINGV-VHD 509
PP W+ GV VHD
Sbjct: 809 PDDLLQRALSEYNPP--KWLMSKGVWVHD 835
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 159/380 (41%), Gaps = 37/380 (9%)
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
RGG+ G HG VL +C T ++F+ R V + + +VS N
Sbjct: 209 RGGIEPSGVSAHGFVLDALFCKGEV--TKALDFH---------RLVMERGFRVGIVSCNK 257
Query: 186 ILAGYVSCGDFDGARR----VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
+L G +S + A R V D P NVV++ T+I G ++G +A LF M +
Sbjct: 258 VLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
+E G L +G H Q + + V + ++ I +Y G
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMG---HKLFSQAL--HKGVKLDVVVFSSTIDVYVKSGD 371
Query: 302 IGDAYQVFTKMP----QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
+ A V+ +M + V++T +I + G EA G++ ++ G+ P
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK-----RGMEPSI 426
Query: 358 ITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
+T ++ C G + G ++ M + G P + YG +VD LS+ G + A
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 418 NM---PLKPNDALWGALLGG-CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAF 473
M ++ N ++ +L+ G C++++ E V + + D A V+ +I
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI--M 543
Query: 474 AKRWQDVIAVRQKMIEMGVK 493
R ++ + + +M +MG++
Sbjct: 544 EGRLEEALFLFFRMFKMGLE 563
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 11/183 (6%)
Query: 290 NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
N++I MY+ CG + DA VF MP+R+ +W +I FAK G G++A+ F +G
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN- 278
Query: 350 VDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
+PD + AC G ++EG F SM + +GI P +EHY +V +L+ G+L
Sbjct: 279 ----KPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYL 334
Query: 410 DEAHGLIENMPLKPNDALWGALLGGCQIHKN----SELASVVEPKLVAELDTDGAAGYLV 465
DEA +E+M +PN LW L+ ++H + +VE + L+ + AG +
Sbjct: 335 DEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVP 392
Query: 466 LLS 468
+ S
Sbjct: 393 VKS 395
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 146/318 (45%), Gaps = 25/318 (7%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVWNHIIRGYARSHTPWKSVECYRQM 105
II L ++ +D L LF+ +DN P+ +N +IR + M
Sbjct: 262 IIDALCNYKNVNDALN----LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 106 VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGV 165
+ + PN T+S L+ A V+ G L E E+++ ++ + ++F ++LIN + +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 166 EQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTM 217
++A+H+F+ M + +VV++N+++ G+ D +F EM R N V++TT+
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
I G Q C A +F +M V G ++ + Y+Q
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ---- 493
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLG 333
R++ +P + N +I G + D + +F + + + V++T+M+ F ++GL
Sbjct: 494 -RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 334 KEALGLFKTMVSDGAGVD 351
+EA LF+ M +G D
Sbjct: 553 EEADALFREMKEEGPLPD 570
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 184/457 (40%), Gaps = 55/457 (12%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA----HKLFSTIDNPSTTVW 82
N +I + Q+ G+S + L++ + QL A K+ P
Sbjct: 95 NKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 154
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
N ++ G+ + +V QMV +P+ FT++ L+ R E + ++V
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ----RSVVSWNSILAGYVSCGDFDG 198
KG ++ ++N RG ++ A + M Q VV +N+I+ + + +
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 199 ARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
A +F EM + NVV++ ++I GR A L +M ++
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 255 XXXXXGDLKLGRWIHWYVQQRIV----------------------ARNQQQ--------P 284
G L ++ + +R + A++ + P
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 285 SVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLF 340
+V N LI + + + ++F +M QR +TV++T++I F + A +F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
K MVS DGV PD +T ++L C+ G V+ +F + R+ + P I Y M+
Sbjct: 455 KQMVS-----DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMI 508
Query: 401 DLLSRAGFLDEAHGLIENMPL---KPNDALWGALLGG 434
+ + +AG +++ L ++ L KPN + ++ G
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 23/235 (9%)
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
R + +I MY+ C DA VF +MP+R++ +W +MI AK G G+ A+ +F + +
Sbjct: 144 RSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEE 203
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
G +PD V AC G ++EG F SM R +G+ +E Y ++++L+
Sbjct: 204 GN-----KPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAAC 258
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVL 466
G LDEA +E M ++P+ +W L+ C + EL +L+ +LD A +
Sbjct: 259 GHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRF-AELIKKLD----ASRMSK 313
Query: 467 LSNIYAFAKRWQDVIAVRQKMIEMG----VKKPPGQSWIQINGVVHDFVAGDMTH 517
SN A + D + +K+ E+ ++ P + +H+F AGD +H
Sbjct: 314 ESNAGLVAAKASD--SAMEKLKELRYCQMIRDDPKKR-------MHEFRAGDTSH 359
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 113/288 (39%), Gaps = 35/288 (12%)
Query: 41 LNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVE 100
N +Q N+ITK ++ LQ D + +W + RS + V
Sbjct: 28 FNSRAQSHNLITKTIT-----SSLQ---------DVLTRPIWQN------RSFVQCRRVS 67
Query: 101 CYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYA 160
Y QMV+ T+ A + +RE +V I+ KGY + L
Sbjct: 68 SYAQMVNNHQSVTIETFD----ALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCG 123
Query: 161 GRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG 220
+E+AR V D + S+++++ Y C D A VF+EMP RN +W TMI
Sbjct: 124 EVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRC 183
Query: 221 CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR---IV 277
A+ G ++A+ +F + GD+ G +H+ R +V
Sbjct: 184 LAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG-LLHFESMYRDYGMV 242
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS-WTSMI 324
+ +V I M A+CG + +A +M +V W +++
Sbjct: 243 LSMEDYVNV------IEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 158/373 (42%), Gaps = 29/373 (7%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
P +IRG+ R K+ + + + A P+ TY+ ++S + G + V
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVS 192
+ V +V ++ G ++QA V D M QR V+++ ++
Sbjct: 195 LDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 193 CGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
A ++ DEM R +VV++ ++ G ++GR +A+ +M + +
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
GRW+ + R PSV N LI+ G++G A +
Sbjct: 312 HNIILRSMCST-----GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 309 FTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
KMPQ +++S+ ++ F K+ A+ + MVS G PD +T +L
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC-----YPDIVTYNTML 421
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM---PL 421
A C G V++ I ++ + G SP + Y ++D L++AG +A L++ M L
Sbjct: 422 TALCKDGKVEDAVEILNQLS-SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 422 KPNDALWGALLGG 434
KP+ + +L+GG
Sbjct: 481 KPDTITYSSLVGG 493
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 157/416 (37%), Gaps = 65/416 (15%)
Query: 40 VLNGLSQKTNIITK--LLSFYIASDQLQHAHKLFSTID-NPSTTVWNHIIRGYARSHTPW 96
+L G ++IT ++S Y + ++ +A + + +P +N I+R S
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLK 221
Query: 97 KSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLI 156
+++E +M+ + P+ TY+ L+ A R
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRD----------------------------- 252
Query: 157 NFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEMPIR--- 209
GV A + D M R VV++N ++ G G D A + ++MP
Sbjct: 253 ------SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 210 -NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
NV++ ++ GR A L +M R G LGR I
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG--LLGRAI 364
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMI 324
+ + ++ QP+ N L+H + + A + +M R V++ +M+
Sbjct: 365 DILEK---MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 325 MAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMN 384
A K G ++A+ + + S G P IT V+ AG + ++ M
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCS-----PVLITYNTVIDGLAKAGKTGKAIKLLDEM- 475
Query: 385 RTWGISPRIEHYGCMVDLLSRAGFLDEAHGL---IENMPLKPNDALWGA-LLGGCQ 436
R + P Y +V LSR G +DEA E M ++PN + + +LG C+
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 136/301 (45%), Gaps = 21/301 (6%)
Query: 67 AHKLFSTIDN----PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
A LF+ ++N P+ ++ +I + M+ + PN T++ L+
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR---- 178
A V+ G L E E+++ ++ + ++F ++LIN + +++A+H+F+ M +
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLF 234
+VV++N+++ G+ D +F EM R N V++TT+I G Q C A +F
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
+M V G L+ + Y+Q R++ +P++ N +I
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-----RSKMEPTIYTYNIMIE 513
Query: 295 MYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
G + D + +F + + + + +MI F ++GL +EA LF+ M DG
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 351 D 351
D
Sbjct: 574 D 574
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 172/408 (42%), Gaps = 61/408 (14%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL-----------SACV 125
PS + ++ GY +V QMV P+ T++ L+ + +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 126 RGGLLREGEQVHGI---VLVKGYC---------------------SNVFVETNLINFYAG 161
+++ G Q + + V+V G C +NV + + +I+
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Query: 162 RGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVS 213
+ A ++F M + +V++++S+++ + + A R+ +M R NVV+
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
+ +I ++G+ +A L+ EM + ++ +L H +
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD--RLDEAKHMF-- 388
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAK 329
++ P+V N LI+ + I + ++F +M QR +TV++T++I F +
Sbjct: 389 -ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
A +FK MVS DGV P+ +T +L C G +++ +F + R+ +
Sbjct: 448 ARDCDNAQMVFKQMVS-----DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KM 501
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL---KPNDALWGALLGG 434
P I Y M++ + +AG +++ L ++ L KP+ ++ ++ G
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 156/385 (40%), Gaps = 32/385 (8%)
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
+N +I + R ++ +M+ EP+ T S LL+ G + + + +
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDF 196
+ GY + T LI+ +A + D M QR ++V++ ++ G GD
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 197 DGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
D A + ++M NVV ++T+I + AL+LF EM V
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVA---RNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
L + W R+++ + P+V NALI + G + +A +++
Sbjct: 302 ISC--------LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 310 TKMPQRST----VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
+M +RS +++S+I F EA +F+ M+S P+ +T ++
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC-----FPNVVTYNTLIN 408
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LK 422
C A +DEG +F M++ G+ Y ++ +A D A + + M +
Sbjct: 409 GFCKAKRIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 423 PNDALWGALLGGCQIHKNSELASVV 447
PN + LL G + E A VV
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVV 492
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 173/376 (46%), Gaps = 34/376 (9%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEP-NGFTYSFLLSACVRGGLLREGEQ 135
P +N II Y + + VE +++ + N TY+ L+ V+ G + + E+
Sbjct: 257 PEAYTYNTIINAYVKQR-DFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYV 191
+ + +G S+V V T+LI++ +G +++A +FD + ++ S ++ +++ G
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375
Query: 192 SCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
G+ A + +EM + V V + T+I G +KG +A ++ M + +
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Query: 248 XXXXXXXXXXXXGDLKLGRW---IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
+L R+ W R++ + +V N LI +Y G + +
Sbjct: 436 TCNTIASCFN-----RLKRYDEAKQWLF--RMMEGGVKLSTVSYTN-LIDVYCKEGNVEE 487
Query: 305 AYQVFTKMP----QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
A ++F +M Q + +++ MI A+ KQG KEA L M ++G + PD+ T
Sbjct: 488 AKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG-----MDPDSYTY 542
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
++ C A VDE R+F+ M G+ Y M+ LS+AG DEA GL + M
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMG-LKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Query: 421 LKP---NDALWGALLG 433
K ++ ++ AL+G
Sbjct: 602 RKGYTIDNKVYTALIG 617
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 177/394 (44%), Gaps = 36/394 (9%)
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
S+ + ++F P+T +N +I G + ++V +MV+ +P+ FTY
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY--- 223
Query: 121 LSACVRGGLLREGEQVHGIVLVKGY-----CSNVFVETNLINFYAGRGGVEQARHVFDGM 175
V GL + G+ + L+K ++V + T +I+ V A ++F M
Sbjct: 224 --GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 176 GQR----SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRC 227
+ +VV++NS++ + G + A R+ +M R NVV+++ +I ++G+
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 228 KQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVR 287
+A L+ EM + ++ +L H + ++ P+V
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD--RLDEAKHMF---ELMISKDCFPNVV 396
Query: 288 LNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTM 343
N LI + + + ++F +M QR +TV++ ++I + G A +FK M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
VS DGV PD IT ++L C G +++ +F + ++ + P I Y M++ +
Sbjct: 457 VS-----DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGM 510
Query: 404 SRAGFLDEAHGLIENMPL---KPNDALWGALLGG 434
+AG +++ L ++ L KPN ++ ++ G
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 126/287 (43%), Gaps = 56/287 (19%)
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
NP+ ++ +I + + ++ + Y +M+ +P+ FTYS L++ L E +
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYV 191
+ +++ K NV LI + VE+ +F M QR + V++N+++ G
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 192 SCGDFDGARRVFDEM------PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
GD D A+++F +M P ++++++ ++ G + G+ ++AL +F ++++++E
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPP--DIITYSILLDGLCKYGKLEKALVVFEYLQKSKME-- 497
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
P + N +I G + D
Sbjct: 498 --------------------------------------PDIYTYNIMIEGMCKAGKVEDG 519
Query: 306 YQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
+ +F + + + + +T+MI F ++GL +EA LF+ M DG
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 173/431 (40%), Gaps = 32/431 (7%)
Query: 43 GLSQKTNIITKLLSFYIASDQLQHAHKLFSTI----DNPSTTVWNHIIRGYARSHTPWKS 98
GL + T L+ + +L LF + D+P +N +IRG+ + ++
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 99 VECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINF 158
E + M+ PN +TY+ L+ G +E Q+ +++ K N +IN
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 159 YAGRGGVEQARHVFDGMGQRSV----VSWNSILAGYVSCGDFDGARRVFDEM------PI 208
G V A + + M +R +++N +L G + GD D A ++ M
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
+V+S+ +I G ++ R QAL ++ + GD+ +
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP----QRSTVSWTSMI 324
+ + RN + A+I + G++ A + KM Q S + ++
Sbjct: 482 WKQISDSKIVRNSDTYT-----AMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 325 MAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMN 384
+ K+G +A LF+ M D PD ++ +++ AG + + M+
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNF-----PDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 385 RTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALLGGCQIHKNS 441
R G+SP + Y +++ + G+LDEA + M +P+ + ++L C +
Sbjct: 592 RA-GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 442 ELASVVEPKLV 452
+ + + KLV
Sbjct: 651 DKLTELVKKLV 661
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 155/372 (41%), Gaps = 26/372 (6%)
Query: 80 TVWNH--IIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
V+NH +++G R+ K+V R+M P+ F+Y+ ++ G L + ++
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG----QRSVVSWNSILAGYVSC 193
+ G ++ LI+ + G +++A M + +V + S++ G+ C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 194 GDFDGARRVFDEMPIRN----VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
G+ D + +FDE+ R +++ T+I G + G+ K+A +F M V
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR-----P 315
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G +G+ ++ ++P+ N +I+ G++ DA ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 310 TKMPQRST----VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
M +R T +++ ++ +G EA L M+ D + D PD I+ ++
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD---PDVISYNALIH 432
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL---IENMPLK 422
C + + I+ + G R+ +++ +AG +++A L I + +
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 423 PNDALWGALLGG 434
N + A++ G
Sbjct: 492 RNSDTYTAMIDG 503
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 31/292 (10%)
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----S 316
+L+ G+ + + R RN P V N +I + + A ++ +M S
Sbjct: 155 NLECGKAVSLLREMR---RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS 211
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
V+W +I AF K G EA+G K M G+ D + ++ C G +D G
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEM-----KFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM---PLKPNDALWGALLG 433
+ +F + G SP Y ++ + G L EA + E M ++PN + L+
Sbjct: 267 KALFDEV-LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 434 G-CQIHKNSELASVVEPKLVAELDTD-GAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMG 491
G C + K E ++ L+ E D + A Y ++++ + ++A +++E+
Sbjct: 326 GLCGVGKTKEALQLL--NLMIEKDEEPNAVTYNIIINKLCK-----DGLVADAVEIVELM 378
Query: 492 VKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
K+ I N ++ A + S +Y +L + S+ D PD+
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD---SSYTD---PDV 424
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 150/339 (44%), Gaps = 25/339 (7%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIIT--KLLSFYIASDQLQHAHKLFSTI----DNPSTT 80
N I++ I + Q++ G+ K N++T L+ + L HA +LF+ + P+
Sbjct: 167 NRIEDAIALFDQIL--GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
+N ++ G + R M+ EPN T++ L+ A V+ G L E ++++ ++
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV----VSWNSILAGYVSCGDF 196
+ +VF +LIN G +++AR +F M + V + +++ G+
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 197 DGARRVFDEMP----IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
+ ++F EM + N +++T +I G GR A +F +M R
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G ++ I Y+++R + ++ +I G + DA+ +F +
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKR-----EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 313 PQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
+ + +++T+MI F ++GL EA LFK M DG
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 135/354 (38%), Gaps = 57/354 (16%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
P + ++ GY + ++ + Q++ +PN TY+ L+ + L ++
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 137 HGIV--------------LVKGYCS---------------------NVFVETNLINFYAG 161
+ LV G C NV T LI+ +
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 162 RGGVEQARHVFDGMGQRS----VVSWNSILAGYVSCGDFDGARRVFDEMP----IRNVVS 213
G + +A+ +++ M Q S V ++ S++ G G D AR++F M N V
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
+TT+I G + R + + +F EM + V G + + + +
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAK 329
R + P +R N L+ G + A +F M +R + V++T +I K
Sbjct: 391 SR-----RAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASM 383
G ++A LF ++ S G++P+ IT ++ C G + E +F M
Sbjct: 446 LGKVEDAFDLFCSLFS-----KGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 168/413 (40%), Gaps = 67/413 (16%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVW 82
N ++ + + +Q+V G+ + T ++ + + +A LF ++N P ++
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 83 NHIIRGYARSHTPWKSVECY-RQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
++ G S W+ + R M + +P+ T++ L+ A V+ G + E+++ ++
Sbjct: 216 TSLVNGLCNSGR-WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFD 197
N+F T+LIN + G V++AR +F M + VV++ S++ G+ C D
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 198 GARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
A ++F EM + N +++TT+I G Q G+ A +F M
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM---------------- 378
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
V+R P++R N L+H G + A +F M
Sbjct: 379 -----------------------VSRGVP-PNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 314 QRSTV-------SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
+R ++ ++ G ++AL +F+ M + + I
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQ-----G 469
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
C AG V +F S+ + G+ P + Y M+ L R G EAH L M
Sbjct: 470 MCKAGKVKNAVNLFCSL-PSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 125/285 (43%), Gaps = 16/285 (5%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
P +N +I + + + E Y +M+ PN FTY+ L++ G + E Q+
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVS 192
++ KG +V T+LIN + V+ A +F M Q+ + +++ +++ G+
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 193 CGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
G + A+ VF M R N+ ++ ++ G+ K+AL +F +M++ ++
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 249 X-XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
+ KL + + + R + + + +I G + +A
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMR---KREMDIGIITYTIIIQGMCKAGKVKNAVN 481
Query: 308 VFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
+F +P + + V++T+MI ++GL EA LF+ M DG
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 168/438 (38%), Gaps = 80/438 (18%)
Query: 44 LSQKTNIITKLLSFYIASDQLQH------AHKLFSTIDNPSTTVWNHIIRGYARSHTPWK 97
++ N+I K+ F + + H +H L++ N ++ + +S P+
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC---------NLLMNCFCQSSQPYL 125
Query: 98 SVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLIN 157
+ +M+ EP+ T++ L++ G + E + ++ G +V + T +I+
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 158 FYAGRGGVEQARHVFDGM---GQR-SVVSWNSILAGYVSCG---DFDGARRVFDEMPIR- 209
G V A +FD M G R VV + S++ G + G D D R + I+
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
+V+++ +I ++G+ A L+ EM R + G + R +
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIM 325
+ ++ + P V +LI+ + C + DA ++F +M Q+ +T+++T++I
Sbjct: 306 YLMETKGCF-----PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
F + G A +F MVS G
Sbjct: 361 GFGQVGKPNVAQEVFSHMVSRG-------------------------------------- 382
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP------LKPNDALWGALLGG-CQIH 438
+ P I Y ++ L G + +A + E+M + PN + LL G C
Sbjct: 383 ---VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 439 KNSELASVVEPKLVAELD 456
K + V E E+D
Sbjct: 440 KLEKALMVFEDMRKREMD 457
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNP----STTVWNHIIRGYARSHTPWKSVECYRQMVS 107
T L++ + ++ A K+F + +T + +I+G+ + P + E + MVS
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 108 TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL---VKGYCSNVFVETNLINFYAGRGG 164
PN TY+ LL G +++ + + + G N++ L++ G
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 165 VEQARHVFDGMGQRSV----VSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTT 216
+E+A VF+ M +R + +++ I+ G G A +F +P + NVV++TT
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 217 MIAGCAQKGRCKQALSLFGEMRR 239
MI+G ++G +A LF +M+
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKE 523
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 135/305 (44%), Gaps = 21/305 (6%)
Query: 64 LQHAHKLFSTIDNPSTTV----WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSF 119
L +A LF+ ++ T +N +I G+ + + R M+ + PN T+S
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR- 178
L+ + V+ G LRE E++H ++ +G + T+LI+ + +++A + D M +
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 179 ---SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQAL 231
++ ++N ++ GY D +F +M +R V V++ T+I G + G+ A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
LF EM +V G+ + I ++ +++ + + + N
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE-----KSKMELDIGIYNI 513
Query: 292 LIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
+IH + + DA+ +F +P + ++ MI K+G EA LF+ M DG
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 348 AGVDG 352
DG
Sbjct: 574 HAPDG 578
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 159/435 (36%), Gaps = 61/435 (14%)
Query: 60 ASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSF 119
A D + + + P+ ++ + A++ + +QM N +T S
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD---GMG 176
+++ R L G ++ GY N + LIN G V +A + D MG
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 177 QR-SVVSWNSILAGYVSCGDFDGARRVFDEM-------------PIRNV----------- 211
+ +++ N+++ G G A + D+M P+ NV
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 212 ---------------VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
V ++ +I G + G A +LF EM E
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-----EMKGITTNIITYNI 303
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR- 315
G GRW R + + + P+V + LI + G + +A ++ +M R
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 316 ---STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
T+++TS+I F K+ +A + MVS G P+ T +++ C A
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD-----PNIRTFNILINGYCKANR 418
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM---PLKPNDALWG 429
+D+G +F M+ G+ Y ++ G L+ A L + M + PN +
Sbjct: 419 IDDGLELFRKMS-LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 430 ALLGGCQIHKNSELA 444
LL G + SE A
Sbjct: 478 ILLDGLCDNGESEKA 492
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 158/367 (43%), Gaps = 31/367 (8%)
Query: 64 LQHAHKLFSTID----NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSF 119
L +A LF+ ++ ++ +IRG+ + + R M+ + P+ +S
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR- 178
L+ V+ G LRE E++H ++ +G + T+LI+ + +++A H+ D M +
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 179 ---SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQAL 231
++ ++N ++ GY D +F +M +R V V++ T+I G + G+ + A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
LF EM RV G+ + I ++ +++ + + + N
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE-----KSKMELDIGIYNI 497
Query: 292 LIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
+IH + + DA+ +F +P + ++ MI K+G EA LF+ M DG
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 348 AGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS--- 404
P+ T +++ A G + ++ + R G S +VD+LS
Sbjct: 558 HS-----PNGCTYNILIRAHLGEGDATKSAKLIEEIKR-CGFSVDASTVKMVVDMLSDGR 611
Query: 405 -RAGFLD 410
+ FLD
Sbjct: 612 LKKSFLD 618
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 153/408 (37%), Gaps = 61/408 (14%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
P ++ + AR+ ++ +QM N +T S +++ C R L
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD---GMGQR-SVVSWNSILAGYVS 192
G ++ GY + + LIN G V +A + D MG + ++++ N+++ G
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 193 CGDFDGARRVFDEM-------------PIRNV--------------------------VS 213
G A + D M P+ V V
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
++ +I G + G A +LF EM E G GRW
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEM-----EIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAK 329
R + + + P V +ALI + G + +A ++ +M QR TV++TS+I F K
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
+ +A + MVS G G P+ T +++ C A +D+G +F M+ G+
Sbjct: 365 ENQLDKANHMLDLMVSKGCG-----PNIRTFNILINGYCKANLIDDGLELFRKMS-LRGV 418
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENM---PLKPNDALWGALLGG 434
Y ++ G L+ A L + M ++P+ + LL G
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 98/216 (45%), Gaps = 12/216 (5%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVWNHIIRGY 89
++H +++ G+S T T L+ + +QL A+ + + + P+ +N +I GY
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 90 ARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNV 149
+++ +E +R+M + TY+ L+ G L +++ ++ + ++
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 150 FVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDE 205
L++ G E+A +F+ + + + +N I+ G + D A +F
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 206 MPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+P++ +V ++ MI G +KG +A LF +M
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 185/487 (37%), Gaps = 65/487 (13%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN-- 76
+ T L N Q + VV G+S + T ++ + +++ A KLFS ++
Sbjct: 232 LLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 77 --PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
P+ +N +I G ++ +MV EP TYS L+ R + +
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV----VSWNSILAGY 190
V + KG+ NV V NLI+ + G + +A + D M + + ++N+++ GY
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 191 VSCGDFDGARRVFDEMPI----RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
G D A R+ EM N S+T++I AL GEM +
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 247 XXXXXXXXXXXXXG--DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
G L W + + +V R +NAL+H G + +
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVV-------DTRTSNALLHGLCEAGKLDE 523
Query: 305 AYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD--------- 351
A+++ ++ R VS+ ++I + EA MV G D
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 352 ---------------------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G+ PD T V++ CC A +EG+ F M + +
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM-MSKNVQ 642
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK---PNDALWGALLGGCQIHKNSELASVV 447
P Y ++ R+G L A L E+M K PN A + +L+ G I ++ V
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI-----ISRVE 697
Query: 448 EPKLVAE 454
E KL+ E
Sbjct: 698 EAKLLFE 704
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVW 82
N ++ IQ NG+ + ++ +++ + + F + + P+T V+
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
NH+IR Y RS ++E M PN TY+ L+ + E + + + +
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV----VSWNSILAGYVSCGDFDG 198
+G NVF T LI+ Y G + + + M ++V +++ ++ GY G+
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 199 ARRVFDEMPIRNVV----SWTTMIAGCAQKG 225
A R+ +EM + +V ++ I G ++G
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 185/487 (37%), Gaps = 65/487 (13%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN-- 76
+ T L N Q + VV G+S + T ++ + +++ A KLFS ++
Sbjct: 232 LLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 77 --PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
P+ +N +I G ++ +MV EP TYS L+ R + +
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV----VSWNSILAGY 190
V + KG+ NV V NLI+ + G + +A + D M + + ++N+++ GY
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 191 VSCGDFDGARRVFDEMPI----RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
G D A R+ EM N S+T++I AL GEM +
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 247 XXXXXXXXXXXXXG--DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
G L W + + +V R +NAL+H G + +
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVV-------DTRTSNALLHGLCEAGKLDE 523
Query: 305 AYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD--------- 351
A+++ ++ R VS+ ++I + EA MV G D
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 352 ---------------------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G+ PD T V++ CC A +EG+ F M + +
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM-MSKNVQ 642
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK---PNDALWGALLGGCQIHKNSELASVV 447
P Y ++ R+G L A L E+M K PN A + +L+ G I ++ V
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI-----ISRVE 697
Query: 448 EPKLVAE 454
E KL+ E
Sbjct: 698 EAKLLFE 704
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVW 82
N ++ IQ NG+ + ++ +++ + + F + + P+T V+
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
NH+IR Y RS ++E M PN TY+ L+ + E + + + +
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV----VSWNSILAGYVSCGDFDG 198
+G NVF T LI+ Y G + + + M ++V +++ ++ GY G+
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 199 ARRVFDEMPIRNVV----SWTTMIAGCAQKG 225
A R+ +EM + +V ++ I G ++G
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 181/447 (40%), Gaps = 65/447 (14%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVE-CYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
P +N ++ RS E +++M+ ++ PN FTY+
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN----------------- 209
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYV 191
+L++G+C +A G ++ A +FD M + +VV++N+++ GY
Sbjct: 210 ----ILIRGFC------------FA--GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 192 SCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
D ++ M ++ N++S+ +I G ++GR K+ + EM R
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR-----RGY 306
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
G K G + V + R+ PSV +LIH G + A +
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 308 VFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
+M R + ++T+++ F+++G EA + + M +G P +T +
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM-----NDNGFSPSVVTYNAL 421
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP--- 420
+ C G +++ + M + G+SP + Y ++ R+ +DEA + M
Sbjct: 422 INGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 421 LKPNDALWGALLGG-CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
+KP+ + +L+ G C+ + E + E L L D Y L+ N Y +
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT-YTALI-NAYCMEGDLEK 538
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGV 506
+ + +M+E GV + ING+
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGL 565
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 166/409 (40%), Gaps = 26/409 (6%)
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+P+ +N +IRG+ + ++ + +M + PN TY+ L+ + + +G +
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFK 261
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV----VSWNSILAGYV 191
+ + +KG N+ +IN G +++ V M +R V++N+++ GY
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 192 SCGDFDGARRVFDEM----PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
G+F A + EM +V+++T++I + G +A+ +MR
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR-----VRGL 376
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
G + G Y R + N PSV NALI+ + G + DA
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 308 VFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
V M ++ VS+++++ F + EAL + + MV G++PD IT +
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE-----KGIKPDTITYSSL 491
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK- 422
+ C E ++ M R G+ P Y +++ G L++A L M K
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 423 --PNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSN 469
P+ + L+ G + A + KL E Y L+ N
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/439 (19%), Positives = 175/439 (39%), Gaps = 73/439 (16%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
I VV+NGL ++ + K +SF + ++ + + L +N +I+GY +
Sbjct: 276 ISYNVVINGLCREGRM--KEVSF-VLTEMNRRGYSL-------DEVTYNTLIKGYCKEGN 325
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN------ 148
+++ + +M+ P+ TY+ L+ + + G + + + V+G C N
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 149 ----------------VFVETN-------------LINFYAGRGGVEQARHVFDGMGQR- 178
V E N LIN + G +E A V + M ++
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 179 ---SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQAL 231
VVS++++L+G+ D D A RV EM + + ++++++I G ++ R K+A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR------------IVAR 279
L+ EM R + GDL+ +H + ++ I
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDA--YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEAL 337
N+Q + L+ ++ V D + + S S+I F +G+ EA
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG 397
+F++M+ +PD +++ C AG + + ++ M ++ G
Sbjct: 626 QVFESMLGKNH-----KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS-GFLLHTVTVI 679
Query: 398 CMVDLLSRAGFLDEAHGLI 416
+V L + G ++E + +I
Sbjct: 680 ALVKALHKEGKVNELNSVI 698
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 181/435 (41%), Gaps = 83/435 (19%)
Query: 41 LNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID-------NPSTTVWNHIIRGYARSH 93
LNG+ +T +++ Y +L A FS + P T ++ ++ G+
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFA---FSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVK-----GYCSN 148
++V +MV + P+ T S L++ GL +G +VL+ G+ +
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLIN-----GLCLKGRVSEALVLIDRMVEYGFQPD 209
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFD 204
++N G A +F M +R SVV ++ ++ G FD A +F+
Sbjct: 210 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 205 EMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
EM ++ +VV+++++I G G+ + EM
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM----------------------- 306
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----S 316
+GR I P V +ALI ++ G + +A +++ +M R
Sbjct: 307 ---IGRNII--------------PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
T+++ S+I F K+ EA +F MVS G PD +T +++ + C A VD+G
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGC-----EPDIVTYSILINSYCKAKRVDDG 404
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALLG 433
R+F ++ + G+ P Y +V ++G L+ A L + M + P+ +G LL
Sbjct: 405 MRLFREIS-SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 434 GCQIHKNSELASVVE 448
G + N EL +E
Sbjct: 464 G--LCDNGELNKALE 476
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 133/328 (40%), Gaps = 27/328 (8%)
Query: 46 QKTNIITKLLSFYIASDQL------QHAHKLFSTID----NPSTTVWNHIIRGYARSHTP 95
++ NI ++ + I D L A LF+ ++ ++ +I G
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 96 WKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNL 155
+ R+M+ P+ T+S L+ V+ G L E ++++ ++ +G + +L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 156 INFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEMP---- 207
I+ + + +A +FD M + +V+++ ++ Y D R+F E+
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
I N +++ T++ G Q G+ A LF EM V G+L
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSM 323
I +Q +++ + + N +IH + + DA+ +F + + V++ M
Sbjct: 477 IFEKMQ-----KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 324 IMAFAKQGLGKEALGLFKTMVSDGAGVD 351
I K+G EA LF+ M DG D
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPD 559
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/486 (21%), Positives = 191/486 (39%), Gaps = 60/486 (12%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVW 82
N +I + Q+ G+S + ++++ QL A + + PS
Sbjct: 89 NKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTL 148
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
N ++ G+ + ++V QMV +P+ T++ L+ + E + ++V
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG----QRSVVSWNSILAGYVSCGDFDG 198
KG ++ +IN RG + A ++ + M + VV +N+I+ G D
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 199 ARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
A +F++M + +V ++ +I+ GR A L +M +
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G L ++ +V P V N LI + + + +VF +M Q
Sbjct: 329 AFVKEGKLVEAEKLY----DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 315 R----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD------------------- 351
R +TV++T++I F + A +FK MVSDG D
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 352 -----------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
++ D +T ++ A C AG V++G +F S++ G+ P + Y M+
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMM 503
Query: 401 DLLSRAGFLDEAHGLI----ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELD 456
R G +EA L E+ PL PN + L+ ++ E AS +L+ E+
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRA-RLRDGDEAASA---ELIKEMR 558
Query: 457 TDGAAG 462
+ G AG
Sbjct: 559 SCGFAG 564
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 200/451 (44%), Gaps = 50/451 (11%)
Query: 38 QVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVWNHIIRGYARSH 93
Q+ LNG++ + +++ + + A+ + + P TT +N +I+G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG-------LLREGEQVHGIVLVKGYC 146
++V +MV +P+ TY+ +++ R G LLR+ E+ +
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE-------RNVK 225
Query: 147 SNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRV 202
++VF + +I+ G ++ A +F M + SVV++NS++ G G ++ +
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 203 FDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
+M R NV+++ ++ ++G+ ++A L+ EM +
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-----PNIITYNTLM 340
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR--- 315
G R ++ RN+ P + +LI Y + D +VF + +R
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 316 -STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+ V+++ ++ F + G K A LF+ MVS GV PD +T ++L C G ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVS-----HGVLPDVMTYGILLDGLCDNGKLE 455
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGAL 431
+ IF + ++ + I Y +++ + + G +++A L ++P +KPN + +
Sbjct: 456 KALEIFEDLQKS-KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 432 LGG-CQIHKNSELASVVEPKLVAELDTDGAA 461
+ G C+ SE A++ L+ +++ DG A
Sbjct: 515 ISGLCKKGSLSE-ANI----LLRKMEEDGNA 540
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 143/341 (41%), Gaps = 23/341 (6%)
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
S +N ++RG ++ + MVS E PN T++ LL V+ G L+E +++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSC 193
++ +G N+ L++ Y + + +A ++ D M + +V++ S++ GY
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 194 GDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
D +VF + R N V+++ ++ G Q G+ K A LF EM V
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G L+ I +Q +++ + + +I G + DA+ +F
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQ-----KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 310 TKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
+P + + +++T MI K+G EA L + M DG P+ T ++
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-----PNDCTYNTLIR 551
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
A G + ++ M ++ G S ++D+L A
Sbjct: 552 AHLRDGDLTASAKLIEEM-KSCGFSADASSIKMVIDMLLSA 591
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 29 IQNLIQIHSQVVLNGLSQKTNIIT--KLLSFYIASDQLQHAHKLFSTID----NPSTTVW 82
+Q +++ +++ G+S NIIT L+ Y ++L A+ + + +P +
Sbjct: 314 LQEANELYKEMITRGISP--NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
+I+GY ++ +R + N TYS L+ + G ++ E++ ++
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS-----VVSWNSILAGYVSCGDFD 197
G +V L++ G +E+A +F+ + Q+S +V + +I+ G G +
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 198 GARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
A +F +P + NV+++T MI+G +KG +A L +M
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 113/515 (21%), Positives = 208/515 (40%), Gaps = 89/515 (17%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI----DNPSTTVWNHIIRGY 89
++ SQ + G+ + + + Y+ S L A ++ + +P+ + +I+G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 90 ARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNV 149
+ +++ Y Q++ EP+ TYS L+ + G LR G ++ ++ GY +V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 150 FVETNLINFYAGRGGVEQA-RHVFDGMGQR---SVVSWNSILAGYVSCGDFDGARRVFDE 205
+ L++ + +G + A R +GQ +VV +NS++ G+ FD A +VF
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 206 MPIR----NVVSWTT-MIAGCAQKGRCKQ-----ALSLFGEMRRARVEXXXXXXXXXXXX 255
M I +V ++TT M + CK L LF M+
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ----------------- 564
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM--- 312
RN+ + + N +IH+ C I DA + F +
Sbjct: 565 -----------------------RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 601
Query: 313 -PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
+ V++ +MI + EA +F+ + G P+ +TL +++ C
Sbjct: 602 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG-----PNTVTLTILIHVLCKNN 656
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK---PNDALW 428
+D R+F+ M G P YGC++D S++ ++ + L E M K P+ +
Sbjct: 657 DMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 715
Query: 429 GALLGG-CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKM 487
++ G C+ + E ++ + A+L D A Y +L+ Y R + + + M
Sbjct: 716 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA-YAILIRG-YCKVGRLVEAALLYEHM 773
Query: 488 IEMGVK------------KPPGQSWIQINGV-VHD 509
+ GVK PP W+ GV VHD
Sbjct: 774 LRNGVKPDDLLQRALSEYNPP--KWLMSKGVWVHD 806
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/505 (20%), Positives = 200/505 (39%), Gaps = 63/505 (12%)
Query: 59 IASDQLQHAHKLFSTIDN----PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNG 114
++ DQ++ A +L S + + P+ + +I G+ + ++ + ++ M EP+
Sbjct: 262 LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 115 FTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
YS L+ + G+L G ++ L KG +V V ++ I+ Y G + A V+
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY-- 379
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF 234
+R+ + NVV++T +I G Q GR +A ++
Sbjct: 380 -------------------------KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
G++ + +E G+L+ G + + + P V + L+
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSG-----FALYEDMIKMGYPPDVVIYGVLVD 469
Query: 295 MYASCGVIGDAYQVFTKMPQRS----TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
+ G++ A + KM +S V + S+I + + EAL +F+ M G+
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM-----GI 524
Query: 351 DGVRPDAITLIVVL------CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS 404
G++PD T V+ A C G ++F M R IS I ++ LL
Sbjct: 525 YGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRN-KISADIAVCNVVIHLLF 583
Query: 405 RAGFLDEAHGLIENM---PLKPNDALWGALLGG-CQIHKNSELASVVEPKLVAELDTDGA 460
+ +++A N+ ++P+ + ++ G C + + E + E V +
Sbjct: 584 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 643
Query: 461 AGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHS 520
L +L ++ I + M E G KP ++ G + D+ + + + S
Sbjct: 644 T--LTILIHVLCKNNDMDGAIRMFSIMAEKG-SKPNAVTY----GCLMDWFSKSVDIEGS 696
Query: 521 YFIYEILSEIIKQSHVDSYEPDITG 545
+ ++E + E + SY I G
Sbjct: 697 FKLFEEMQEKGISPSIVSYSIIIDG 721
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 154/373 (41%), Gaps = 37/373 (9%)
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
RGG+ G HG VL +C T ++F+ R V + + +VS N
Sbjct: 209 RGGIEPSGVSAHGFVLDALFCKGEV--TKALDFH---------RLVMERGFRVGIVSCNK 257
Query: 186 ILAGYVSCGDFDGARR----VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
+L G +S + A R V D P NVV++ T+I G ++G +A LF M +
Sbjct: 258 VLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
+E G L +G H Q + + V + ++ I +Y G
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMG---HKLFSQAL--HKGVKLDVVVFSSTIDVYVKSGD 371
Query: 302 IGDAYQVFTKMP----QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
+ A V+ +M + V++T +I + G EA G++ ++ G+ P
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK-----RGMEPSI 426
Query: 358 ITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
+T ++ C G + G ++ M + G P + YG +VD LS+ G + A
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 418 NM---PLKPNDALWGALLGG-CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIY-- 471
M ++ N ++ +L+ G C++++ E V + + D A V+ +I
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMED 545
Query: 472 AFAKRWQDVIAVR 484
AF K + I ++
Sbjct: 546 AFCKHMKPTIGLQ 558
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 104/246 (42%), Gaps = 19/246 (7%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLI--QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK 69
R SI + F C +++ I Q+ + N +S + ++ +++ A K
Sbjct: 539 RVSIMEDAF-----CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 70 LFSTIDN----PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
F+ + P +N +I GY ++ + + T PN T + L+
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 653
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVV 181
+ + ++ I+ KG N L+++++ +E + +F+ M ++ S+V
Sbjct: 654 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 713
Query: 182 SWNSILAGYVSCGDFDGARRVF----DEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
S++ I+ G G D A +F D + +VV++ +I G + GR +A L+ M
Sbjct: 714 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Query: 238 RRARVE 243
R V+
Sbjct: 774 LRNGVK 779
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 161/363 (44%), Gaps = 53/363 (14%)
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS----VVSWNSILAGYVSCGD 195
+L G+ NV+V L+N + G + A+ VFD + +RS VVS+N+++ GY G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 196 FDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
D R+ +M +V +++ +I ++ + A LF EM + +
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
G++ L + + Q+++++ Q P + L N L++ + G + A +
Sbjct: 351 LIHGHSRNGEIDLMKESY----QKMLSKGLQ-PDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 312 MPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD---------------- 351
M +R +++T++I F + G + AL + K M +G +D
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 352 --------------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG 397
G++PD +T +++ A C G G ++ M ++ G P + Y
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM-QSDGHVPSVVTYN 524
Query: 398 CMVDLLSRAGFLDEAHGLIE---NMPLKPNDALWGALLGGCQIHKNSELASVVEPK--LV 452
+++ L + G + A L++ N+ + P+D + LL G H NS + +P+ +V
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIV 584
Query: 453 AEL 455
A+L
Sbjct: 585 ADL 587
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 176/439 (40%), Gaps = 52/439 (11%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID----NPSTTVW 82
+++Q L+Q Q+ L G ++ ++S Y + A ++F I +PS ++
Sbjct: 93 DSVQYLLQ---QMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 149
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
NH++ + YR M EPN FTY+ LL A + + +++ +
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRV 202
KG C + T +I+ G V++ R + + + V +N+++ G D+ GA +
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-EPVVSVYNALINGLCKEHDYKGAFEL 268
Query: 203 FDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
EM + NV+S++T+I G+ + A S +M +
Sbjct: 269 MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 259 XGDL--KLGRWIH----WYVQQRIVARNQQ-------------------------QPSVR 287
G L W + +Q +VA N P++R
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 288 LNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTM 343
+LI+ +A G + A ++ KM + V +T+M+ A + KEA L + M
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
+ P T + C AG +D ++F M + P I Y ++D L
Sbjct: 449 SKENCA-----PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 404 SRAGFLDEAHGLIENMPLK 422
++A ++EA+GL + ++
Sbjct: 504 AKANRIEEAYGLTREIFMR 522
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 165/412 (40%), Gaps = 67/412 (16%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL---------------- 120
P +V+N +I G + H + E R+MV PN +YS L
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 121 ---------------LSACVRGGLLREGEQVHGIVL----VKGYC--SNVFVETNLINFY 159
LS+ V+G LR G + L ++G+ NV L+ +
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLR-GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 160 AGRGGVEQARHVFDGMGQ----RSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NV 211
G + +A VF M + ++ ++ S++ G+ G DGA ++++M NV
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
V +T M+ + + K+A SL M + G L +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY----QVFTKMPQRSTVSWTSMIMAF 327
++Q+ ++ P++ N L+ A I +AY ++F + + S+ ++ +++
Sbjct: 483 MEQQ----HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMN--- 384
GL AL L M+ VDG PD IT+ +++ A C G + ++ ++
Sbjct: 539 CNAGLPGIALQLVGKMM-----VDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGR 593
Query: 385 RTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM---PLKPNDALWGALLG 433
R W P + Y ++ L R+ ++ L+E M + P+ A W L+
Sbjct: 594 RKW--RPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 26/312 (8%)
Query: 64 LQHAHKLFSTID----NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSF 119
L +A LF+ ++ +N +I G+ + + R M+ + PN T+S
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR- 178
L+ + V+ G LRE +Q+ ++ +G N +LI+ + +E+A + D M +
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 179 ---SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQAL 231
++++N ++ GY D +F EM +R N V++ T++ G Q G+ + A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
LF EM RV G+L+ I ++ +++ + + +
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE-----KSKMELDIGIYMI 513
Query: 292 LIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
+IH + + DA+ +F +P + ++ MI ++ +A LF+ M +G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 348 AGVDGVRPDAIT 359
PD +T
Sbjct: 574 HA-----PDELT 580
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 166/388 (42%), Gaps = 51/388 (13%)
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
S+ L+ ++ P+ N ++ G + +V +MV T +PN TY +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 121 LSACVRGG-------LLREGEQ-------VHGIVLVKGYCSNVFVETNLINFYAGRGGVE 166
L+ + G LLR+ E+ V +++ G C + G ++
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD--------------GSLD 280
Query: 167 QARHVFDGMG----QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMI 218
A ++F+ M + ++++N+++ G+ + G +D ++ +M R NVV+++ +I
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 219 AGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVA 278
++G+ ++A L EM + + G K R ++
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGI-----APNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 279 RNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGK 334
P + N LI+ Y I D ++F +M R +TV++ +++ F + G +
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
A LF+ MVS VRPD ++ ++L C G +++ IF + ++ + I
Sbjct: 456 VAKKLFQEMVS-----RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS-KMELDIG 509
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLK 422
Y ++ + A +D+A L ++PLK
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 186/459 (40%), Gaps = 83/459 (18%)
Query: 17 QHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
+F+ + + ++ + Q+ G++ ++ +++ + +L +A FST+
Sbjct: 92 NRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA---FSTMGK 148
Query: 77 -------PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
P T ++N ++ G +++E +MV +P T + L++ GL
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN-----GL 203
Query: 130 LREGEQVHGIVLVK-----GYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV---- 180
G+ +VL+ G+ N ++N G A + M +R++
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGE 236
V ++ I+ G G D A +F+EM I+ +++++ T+I G GR L +
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M + ++ P+V + LI +
Sbjct: 324 MIKRKI----------------------------------------SPNVVTFSVLIDSF 343
Query: 297 ASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
G + +A Q+ +M QR +T+++ S+I F K+ +EA+ + M+S G
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD--- 400
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
PD +T +++ C A +D+G +F M+ G+ Y +V ++G L+ A
Sbjct: 401 --PDIMTFNILINGYCKANRIDDGLELFREMS-LRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 413 HGLIENM---PLKPNDALWGALLGGCQIHKNSELASVVE 448
L + M ++P+ + LL G + N EL +E
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDG--LCDNGELEKALE 494
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 130/319 (40%), Gaps = 52/319 (16%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS-------------- 122
P ++N II G + ++ +++M + PN TYS L+S
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 123 ---------------------ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAG 161
A V+ G L E E+++ ++ + ++ ++LIN +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 162 RGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVS 213
+++A+ +F+ M + VV++N+++ G+ + VF EM R N V+
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
+ +I G Q G C A +F EM V G L+ + Y+Q
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAK 329
R++ +P++ N +I G + D + +F + + V++ +MI F +
Sbjct: 494 -----RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 330 QGLGKEALGLFKTMVSDGA 348
+G +EA LFK M DG
Sbjct: 549 KGSKEEADALFKEMKEDGT 567
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 193/445 (43%), Gaps = 50/445 (11%)
Query: 44 LSQKTNIIT--KLLSFYIASDQLQHA----HKLFSTIDNPSTTVWNHIIRGYARSHTPWK 97
L + NI+T LL+ Y S ++ A ++F T P+T +N +I G + +
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 98 SVECYRQMVSTEAEPNGFTYSFLLSA-CVRG------GLLREGEQVHGIVLVKGYCSNVF 150
++ +MV+ +P+ TY +++ C RG LL + EQ L G V
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK---LEPG----VL 257
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEM 206
+ +I+ ++ A ++F M + +VV+++S+++ + G + A R+ +M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 207 PIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDL 262
R +V +++ +I ++G+ +A L+ EM + ++ L
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 263 KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STV 318
+ + ++ + P V N LI + + + +VF +M QR +TV
Sbjct: 378 DEAKQMFEFMVSK-----HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
++ +I + G A +FK MVS DGV P+ +T +L C G +++
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVS-----DGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL---KPNDALWGALLGGC 435
+F + R+ + P I Y M++ + +AG +++ L N+ L KP+ + ++ G
Sbjct: 488 VFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 436 QIHKNSELASVVEPKLVAELDTDGA 460
+ E A L E+ DG
Sbjct: 547 CRKGSKEEADA----LFKEMKEDGT 567
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 146/372 (39%), Gaps = 27/372 (7%)
Query: 91 RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
RS P ++ +M+ EPN T S LL+ + E + + V GY N
Sbjct: 129 RSQLPL-ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 151 VETNLINFYAGRGGVEQARHVFDGM----GQRSVVSWNSILAGYVSCGDFDGARRVFDEM 206
LI+ +A + D M Q +V++ ++ G GD D A + ++M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 207 P----IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDL 262
V+ + T+I G + AL+LF EM +
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL-----C 302
Query: 263 KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STV 318
GRW + + P V +ALI + G + +A +++ +M +R S V
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+++S+I F EA +F+ MVS PD +T ++ C V+EG
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHC-----FPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALLGGC 435
+F M++ G+ Y ++ L +AG D A + + M + PN + LL G
Sbjct: 418 VFREMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 436 QIHKNSELASVV 447
+ E A VV
Sbjct: 477 CKNGKLEKAMVV 488
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 173/439 (39%), Gaps = 34/439 (7%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNH--- 84
N+ +++ ++ GL L+ +L+ A L +D+ ++ NH
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 85 -IIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVK 143
+I G + + +MVS + Y + + G++ + + + ++
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 144 GYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV----SWNSILAGYVSCGDFDGA 199
G +LI Y V Q + M +R++V ++ +++ G S GD DGA
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 200 RRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
+ EM NVV +TT+I Q R A+ + EM+ +
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ- 314
+ R + V+ + N +P+ A I Y A + +M +
Sbjct: 497 LSKAKRMDEAR--SFLVE---MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 315 ---RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
+ V T +I + K+G EA +++MV G+ DA T V++
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD-----QGILGDAKTYTVLMNGLFKND 606
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALW 428
VD+ IF M R GI+P + YG +++ S+ G + +A + + M L PN ++
Sbjct: 607 KVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 429 GALLGG-C---QIHKNSEL 443
LLGG C +I K EL
Sbjct: 666 NMLLGGFCRSGEIEKAKEL 684
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 172/435 (39%), Gaps = 58/435 (13%)
Query: 38 QVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVWNHIIRGYARSH 93
++V NGL +S YI + + A K + P+ + +I Y +
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++ YR MV + TY+ L++ + + + E++ + KG +VF
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 154 NLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEMPIR 209
LIN ++ G +++A +FD M + +V+ +N +L G+ G+ + A+ + DEM ++
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 210 ----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLK-- 263
N V++ T+I G + G +A LF EM+ + D++
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 264 --------------------LGRWIHWY----VQQRIVARNQQ-------QPSVRLNNAL 292
L W+ + ++ ++ R +P+ N +
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 293 IHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
I G + A ++F +M + +++TS++ + K G E +F D A
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF-----DEA 866
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEG----RRIFASMNRTWGISPRIEHYGCMVDLLS 404
G+ PD I V++ A G + ++FA G I ++ +
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926
Query: 405 RAGFLDEAHGLIENM 419
+ G ++ A ++ENM
Sbjct: 927 KVGEMEVAEKVMENM 941
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID----NPSTTVWN 83
N+Q I ++V GL+ I LL + S +++ A +L + +P+ +
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 84 HIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVK 143
II GY +S ++ + +M P+ F Y+ L+ C R + + G K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKK 760
Query: 144 GYCSNVFVETNLINFYAGRGGVEQARHV--------FDGMGQRSVVSWNSILAGYVSCGD 195
G S+ LIN+ G E V FD G+ + V++N ++ G+
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 196 FDGARRVFDEMPIRN----VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
+ A+ +F +M N V+++T+++ G + GR + +F E A +E
Sbjct: 821 LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 219/509 (43%), Gaps = 47/509 (9%)
Query: 31 NLIQIHSQVVLNGLSQKTNIITKLLSF------YIASDQLQHAHKLFSTIDN----PSTT 80
N ++ + V + LS+K I L +F + A +++ A L + P++
Sbjct: 196 NCHKVAANVFYDMLSRK--IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSV 253
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
++ +I ++ + ++++ +M P+ T++ ++ + + E ++ +
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
L++G+ + L+N G V+ A+ +F + + +V +N+++ G+V+ G D A+
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 201 RVFDEMP-----IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
V +M + +V ++ ++I G ++G AL + +MR +
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK-----PNVYSYT 428
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
G KLG+ Y ++ + +P+ N LI + I +A ++F +MP++
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 316 ----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
++ S+I + K AL L + M+S +GV + +T ++ A G
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS-----EGVVANTVTYNTLINAFLRRG 543
Query: 372 FVDEGRRIFASMNRTWGISPRIE-HYGCMVDLLSRAGFLDEAHGLIENMPLK---PNDAL 427
+ E R++ M + SP E Y ++ L RAG +D+A L E M P++
Sbjct: 544 EIKEARKLVNEM--VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 428 WGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKM 487
L+ G E A + ++V T + L++ + A R +D + + +K+
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL-CRAGRIEDGLTMFRKL 660
Query: 488 IEMGVKKPPG-------QSWIQINGVVHD 509
G+ PP SW+ G V+D
Sbjct: 661 QAEGI--PPDTVTFNTLMSWLCKGGFVYD 687
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 114/547 (20%), Positives = 218/547 (39%), Gaps = 70/547 (12%)
Query: 16 QQHVFTLLQSCNNIQNLI----QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
+H++T++ S + L+ ++ ++ G+S+ T L++ Y + + + + +L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 72 STIDN----PSTTVWNHIIRGYARSHTPWKSV-ECYRQMVSTEAEPNGFTYSFLLSACVR 126
+ N PS +N +I AR W+ + + +M +P+ TY+ LLSAC
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 127 GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS------- 179
GL E E V + G ++ ++L+ + G + + V D +G+ +
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF---GKLRRLEKVCDLLGEMASGGSLPD 316
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMP----IRNVVSWTTMIAGCAQKGRCKQALSLFG 235
+ S+N +L Y G A VF +M N +++ ++ Q GR LF
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLK-LGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
EM+ + + G K + H V++ I +P + +I
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI------EPDMETYEGIIF 430
Query: 295 MYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
G+ DA ++ M S+ ++T +I AF + L +EAL F TM G+
Sbjct: 431 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN- 489
Query: 351 DGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLD 410
P T +L + G V E I + + + GI + + ++ + G +
Sbjct: 490 ----PSIETFHSLLYSFARGGLVKESEAILSRLVDS-GIPRNRDTFNAQIEAYKQGGKFE 544
Query: 411 EA---HGLIENMPLKPNDALWGALLG---------GCQIHKNSELASVVEPKLVAELDTD 458
EA + +E P++ A+L C+ AS + P ++
Sbjct: 545 EAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMC----- 599
Query: 459 GAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHK 518
Y ++L+ +Y +RW DV + ++M+ V I+ V+ + GD
Sbjct: 600 ----YCMMLA-VYGKTERWDDVNELLEEMLSNRVS--------NIHQVIGQMIKGDYDDD 646
Query: 519 HSYFIYE 525
++ I E
Sbjct: 647 SNWQIVE 653
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 134/350 (38%), Gaps = 59/350 (16%)
Query: 111 EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARH 170
+PN Y+ ++S R GLL + +V + +G +VF T LIN Y G E +
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 171 VFDGMGQR----SVVSWNSILAGYVSCG-DFDGARRVFDEMPIR----NVVSWTTMIAGC 221
+ D M S++++N+++ G D++G +F EM ++V++ T+++ C
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 222 AQKG-----------------------------------RCKQALSLFGEMRRARVEXXX 246
A +G R ++ L GEM
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
G +K + +Q N SV LN ++ G D
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN-----LFGQSGRYDDVR 372
Query: 307 QVFTKMPQRST----VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
Q+F +M +T ++ +I F + G KE + LF MV + + PD T
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE-----ENIEPDMETYEG 427
Query: 363 VLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
++ AC G ++ R+I M I P + Y +++ +A +EA
Sbjct: 428 IIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALYEEA 476
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/459 (20%), Positives = 181/459 (39%), Gaps = 62/459 (13%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVW 82
N + +I + Q+ G+S + ++ + QL A + + + P
Sbjct: 97 NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 156
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
+ ++ GY S +V QMV +P+ FT++ L+ GL + + LV
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH-----GLFLHNKASEAVALV 211
Query: 143 -----KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG----QRSVVSWNSILAGYVSC 193
+G ++ ++N RG ++ A ++ + M + +VV +N+I+
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 194 GDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
+ A +F EM + NVV++ ++I GR A L M ++
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQR------------------------------IVAR 279
G L +H + QR +
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKE 335
P+++ N LI+ + C + D ++F +M QR +TV++T++I F + G
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 336 ALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEH 395
A +FK MVS+ V D +T ++L C G +D IF + ++ + I
Sbjct: 452 AQMVFKQMVSNR-----VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS-EMELNIFI 505
Query: 396 YGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
Y M++ + +AG + EA L ++ +KP+ + ++ G
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 119/282 (42%), Gaps = 49/282 (17%)
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
NP+ +N +I + + ++ + + +M+ +P+ TY+ L++ L E +Q
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYV 191
+ ++ K N+ LIN + VE +F M QR + V++ +I+ G+
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 192 SCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
GD D A+ VF +M ++++++ ++ G G+ AL +F ++++ +E
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME---- 500
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
L +I+ N +I G +G+A+
Sbjct: 501 ----------------LNIFIY--------------------NTMIEGMCKAGKVGEAWD 524
Query: 308 VFTKMP-QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
+F + + V++ +MI + L +EA LF+ M DG
Sbjct: 525 LFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/417 (19%), Positives = 173/417 (41%), Gaps = 32/417 (7%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
PS +N ++ A+ + + QM + + +TYS ++ R L V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVS 192
++ GY ++ ++L+N Y + A + D M + ++ +++ G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 193 CGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
A + D+M R ++V++ T++ G ++G AL+L +M AR++
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQ---PSVRLNNALIHMYASCGVIGDA 305
L ++ H V + + + P+V N+LI+ + G DA
Sbjct: 261 FNTIID--------SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 306 YQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
++ + M ++ + V++ ++I AF K+G EA L + M+ + PD IT
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ-----RSIDPDTITYN 367
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP- 420
+++ C +DE +++F M + P I+ Y +++ + +++ L M
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFM-VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 421 --LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK 475
L N + ++ G + + A +V ++V+ Y +LL + ++ K
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 139/356 (39%), Gaps = 59/356 (16%)
Query: 77 PSTTVWNHIIRGYARSHTPWK-SVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
P +N I+R R + + Y +M+ PN +T+ L+ + G + ++
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYV 191
+ + +G N T LI+ RG + AR +F M V+ N++L G+
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC 279
Query: 192 SCGD----FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
G F+ R + + + ++++I G + R QA L+ M + +
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI----- 334
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
+P + L LI + G I DA +
Sbjct: 335 -----------------------------------KPDIILYTILIQGLSKAGKIEDALK 359
Query: 308 VFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
+ + MP + T + ++I A +GL +E L M + PDA T ++
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF-----PDACTHTIL 414
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+C+ C G V E IF + ++ G SP + + ++D L ++G L EA L+ M
Sbjct: 415 ICSMCRNGLVREAEEIFTEIEKS-GCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 166/394 (42%), Gaps = 31/394 (7%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
P+ +N+++ + R + + +M+ EPN FTYS L+ + + V
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR-----SVVSWNSILAGYV 191
+ + +N + +IN G +A+ + + + S S+NSI+ G+V
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 192 SCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
GD D A + EM NVV++T++I G + R AL + EM+ ++
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
D+K + + + + P+V + N+LI + + G + A
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGL-----MPNVSVYNSLISGFRNLGKMDAAID 716
Query: 308 VFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
++ KM ++T+MI K G A L+ ++ G+ PD I +V+
Sbjct: 717 LYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD-----LGIVPDEILHMVL 771
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK- 422
+ G + ++ M + ++P + Y ++ R G L+EA L + M K
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKKK-DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 423 --PNDALWGALLGGCQIHKN---SELASVVEPKL 451
+D ++ L+ G ++ K S+++S+ P++
Sbjct: 831 IVHDDTVFNLLVSG-RVEKPPAASKISSLASPEM 863
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDN----PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
L+ + + ++ A+ LFS + P+ +V+N +I G+ +++ Y++MV+
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQAR 169
+ FTY+ ++ ++ G + ++ +L G + + L+N + +G +A
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKAS 785
Query: 170 HVFDGMGQRSVVS----WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTT----MIAGC 221
+ + M ++ V +++++AG+ G+ + A R+ DEM + +V T +++G
Sbjct: 786 KMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGR 845
Query: 222 AQKGRCKQALSLFG--EMRRA 240
+K +S EMR +
Sbjct: 846 VEKPPAASKISSLASPEMRSS 866
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 170/403 (42%), Gaps = 50/403 (12%)
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+P+ V+N +I + ++ + +M PN TYS L+ R G L
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYV 191
G ++ G +V+ +LIN + G + A M + +VV++ S++ GY
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 192 SCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
S G + A R++ EM + ++ ++TT+++G + G + A+ LF EM V+
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 248 XXXXXXXXXXXXGDL-KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
GD+ K ++ ++ IV P LIH G +A
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV------PDTYSYRPLIHGLCLTGQASEA- 596
Query: 307 QVFTKMPQR-----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
+VF + + + +T ++ F ++G +EAL + + MV G +D V
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV-------- 648
Query: 362 VVLCACCHAGFVD-----EGRRIFASMNRTW---GISPRIEHYGCMVDLLSRAGFLDEAH 413
C+ +D + R++F + + G+ P Y M+D S+ G EA
Sbjct: 649 ------CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 414 G---LIENMPLKPNDALWGALLGG-CQ---IHKNSELASVVEP 449
G L+ N PN+ + A++ G C+ +++ L S ++P
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 186/472 (39%), Gaps = 70/472 (14%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
P+ + ++ GY K++ Y +M P+ +T++ LLS R GL+R+
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD---- 525
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV----VSWNSILAGYVS 192
A +F+ M + +V V++N ++ GY
Sbjct: 526 -------------------------------AVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 193 CGDFDGARRVFDEMPIRNVV----SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
GD A EM + +V S+ +I G G+ +A + + E
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G L+ + + QR V + V ++ +L H G ++
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL-FFGLLKEM 673
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
+ + V +TSMI A +K G KEA G++ M+++G P+ +T V+ C
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC-----VPNEVTYTAVINGLC 728
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK---PND 425
AGFV+E + + M + P YGC +D+L++ + + N LK N
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDV---IA 482
A + L+ G E AS +L+ + DG + + + + R DV I
Sbjct: 788 ATYNMLIRGFCRQGRIEEAS----ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 483 VRQKMIEMGVKKPPGQSWIQINGVVHD-FVAGDMTHKHSYFIYEILSEIIKQ 533
+ M E G++ P + + N ++H VAG+M E+ +E+++Q
Sbjct: 844 LWNSMTEKGIR--PDR--VAYNTLIHGCCVAGEMGKAT-----ELRNEMLRQ 886
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/446 (19%), Positives = 183/446 (41%), Gaps = 31/446 (6%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV----WNHIIRG 88
+++ + +V G+ I T ++ L A ++ + ++ V +N +I G
Sbjct: 212 MELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDG 271
Query: 89 YARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN 148
+ W++V + + + +P+ TY L+ + G ++ +L + +
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 149 VFVETNLINFYAGRGGVEQA----RHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFD 204
++L+ RG +E+A + V D ++ +N+++ F A +FD
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD 391
Query: 205 EM---PIR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
M +R N V+++ +I ++G+ ALS GEM ++ G
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----S 316
D+ ++ + I + +P+V +L+ Y S G I A +++ +M + S
Sbjct: 452 DISAA---EGFMAEMI--NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
++T+++ + GL ++A+ LF M V+P+ +T V++ C G + +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAE-----WNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM---PLKPNDALWGALLG 433
M GI P Y ++ L G EA ++ + + N+ + LL
Sbjct: 562 FEFLKEMTEK-GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 434 G-CQIHKNSELASVVEPKLVAELDTD 458
G C+ K E SV + + +D D
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLD 646
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 161/421 (38%), Gaps = 74/421 (17%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID----NPSTTVWN 83
I ++++ ++ G++ T LLS + ++ A KLF+ + P+ +N
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 84 HIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV- 142
+I GY K+ E ++M P+ ++Y L+ GL G+ V V
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH-----GLCLTGQASEAKVFVD 601
Query: 143 ---KGYCS-NVFVETNLINFYAGRGGVEQARHVFDGMGQRSV------------------ 180
KG C N T L++ + G +E+A V M QR V
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 181 ---------------------VSWNSILAGYVSCGDFDGARRVFDEM----PIRNVVSWT 215
V + S++ GDF A ++D M + N V++T
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 216 TMIAGCAQKGRCKQALSLFGEMRR-ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+I G + G +A L +M+ + V D++ +H + +
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK 781
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM----PQRSTVSWTSMIMAFAKQ 330
++A N LI + G I +A ++ T+M +++T+MI ++
Sbjct: 782 GLLANTATY------NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRR 835
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
K+A+ L+ +M G+RPD + ++ CC AG + + + M R G+
Sbjct: 836 NDVKKAIELWNSMTE-----KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ-GLI 889
Query: 391 P 391
P
Sbjct: 890 P 890
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 171/395 (43%), Gaps = 32/395 (8%)
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
+N +I GY + + +M++ P TY+ + A G + + ++ L
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAREL----L 366
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG----QRSVVSWNSILAGYVSCGDFD 197
+V L++ Y G +A +FD + S+V++N+++ G G+ +
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 198 GARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
GA+R+ +EM + +V+++TT++ G + G A ++ EM R ++
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 254 XXXXXXGDLKLGRWIHWY-VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G+L+LG + + + +VA + P + + N I G + A + K+
Sbjct: 487 V-----GELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 541
Query: 313 PQ----RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
+ V++T++I + + G K A L+ M+ + P IT V++
Sbjct: 542 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR-----LYPSVITYFVLIYGHA 596
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI---ENMPLKPND 425
AG +++ + M + G+ P + + ++ + +AG +DEA+ + E + PN
Sbjct: 597 KAGRLEQAFQYSTEMKKR-GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 655
Query: 426 ALWGALLG-GCQIHKNSELASVVEPKLVAELDTDG 459
+ L+ C K E+ + + L E++ DG
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 132/338 (39%), Gaps = 53/338 (15%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
++ A +L S++ P +N ++ GY + ++ + + + + P+ TY+ L+
Sbjct: 358 RIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV-- 180
G L +++ + + +V T L+ + G + A V+D M ++ +
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477
Query: 181 --VSWNSILAGYVSCGDFDGARRVFDEM----------PIRNV----------------- 211
++ + G + GD D A R+ +EM I NV
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 212 -------------VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
V++TT+I G + G+ K A +L+ EM R R+
Sbjct: 538 QRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL-----YPSVITYFVLI 592
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR--- 315
G K GR + + + +P+V +NAL++ G I +AY+ KM +
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652
Query: 316 -STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
+ S+T +I +E + L+K M+ DG
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 168/438 (38%), Gaps = 42/438 (9%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
PS N +++ S K+ Y M+ P T++ +L +C + G L E+V
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDL---ERV 257
Query: 137 HGIVLVKGYCSNVFVETN---LINFYAGRGGVEQARHVFDGMGQRS-----VVSWNSILA 188
I L + F E LIN ++ G +E+AR F G +RS S+N ++
Sbjct: 258 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR-FHGDMRRSGFAVTPYSFNPLIE 316
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTM----IAGCAQKGRCKQALSLFGEMRRARVEX 244
GY G FD A V DEM + T+ I GR A L M V
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDV-- 374
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
G +K+G+++ + + PS+ N LI G +
Sbjct: 375 -------VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEG 427
Query: 305 AYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
A ++ +M + +++T+++ F K G A ++ M+ G ++PD
Sbjct: 428 AQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG-----IKPDGYAY 482
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA---HGLIE 417
G D+ R+ M T +P + Y +D L + G L +A I
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 418 NMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK-- 475
+ L P+ + ++ G + ++A + +++ + Y VL IY AK
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL---IYGHAKAG 599
Query: 476 RWQDVIAVRQKMIEMGVK 493
R + +M + GV+
Sbjct: 600 RLEQAFQYSTEMKKRGVR 617
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 31/352 (8%)
Query: 102 YRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFY-- 159
Y++M+ + +PN FT++ +++A + G + + V + V G NV LI+ Y
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 160 -AGRGGVEQARHVFDGMGQRSV----VSWNSILAGYVSCGDFDGARRVFDEMPIR----N 210
G G + +A V M + V ++N ++ G+ + G+ +VF EM + N
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
V+S+ ++I G G+ +A+S+ +M A V+ LK +
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV----SWTSMIMA 326
V+ + P+ R+ N LI Y G I D + + +M + V ++ +I
Sbjct: 391 SVKGQGAV-----PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
+ G + A LF + S G PD +T +++ C G + + M++
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL------PDLVTFHILMEGYCRKGESRKAAMLLKEMSK- 498
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP----LKPNDALWGALLGG 434
G+ PR Y ++ + G L A + M L+ N A + LL G
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 132/299 (44%), Gaps = 23/299 (7%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVWNHIIRGYA 90
+ ++V N +S L+ + D L + K+F + + P+ +N +I G
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342
Query: 91 RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
+++ +MVS +PN TY+ L++ + +L+E + G V +G
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVV----SWNSILAGYVSCGDFDGARRVFDEM 206
+ LI+ Y G ++ + + M + +V ++N ++AG G+ + A+++FD++
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 207 PIR---NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLK 263
+ ++V++ ++ G +KG ++A L EM + ++ G+LK
Sbjct: 463 TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 264 LGRWIHWYVQQRIVARNQQQPSVRLN----NALIHMYASCGVIGDAYQVFTKMPQRSTV 318
+ + +++ +R+N N L+ Y+ G + DA + +M ++ V
Sbjct: 523 --------AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 164/412 (39%), Gaps = 68/412 (16%)
Query: 45 SQKTNIITKLLSFYIASDQLQHAHKLFSTI---DNP--STTVWNHIIRGYARSHTPWKSV 99
+++ + I L ++ + H +F I DN ++ + + ++ YA +
Sbjct: 114 AKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGF 173
Query: 100 ECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFY 159
E +++ + + + L+ A ++ + E V+ ++ + NVF +IN
Sbjct: 174 EAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINAL 233
Query: 160 AGRGGVEQARHVFDGMG----QRSVVSWNSILAGYVSC---GDFDGARRVFDEMPIR--- 209
G + +AR V + M +VVS+N+++ GY G A V EM
Sbjct: 234 CKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVS 293
Query: 210 -NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
N+ ++ +I G + ++ +F EM V
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV-------------------------- 327
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM----PQRSTVSWTSMI 324
+P+V N+LI+ + G I +A + KM Q + +++ ++I
Sbjct: 328 --------------KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 325 MAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMN 384
F K + KEAL +F ++ GA P +++ A C G +D+G + M
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGA-----VPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 385 RTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK--PNDALWGALLGG 434
R GI P + Y C++ L R G ++ A L + + K P+ + L+ G
Sbjct: 429 RE-GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEG 479
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 146/354 (41%), Gaps = 61/354 (17%)
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
NP+ +N +I +A+ ++ + + +M+ +PN TY+ L++ L E +Q
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYV 191
+ +++ K +V LIN + V +F M +R + V++ +++ G+
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 192 SCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
D D A+ VF +M N++++ T++ G + G+ ++A+ +F ++++++E
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME---- 482
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
P + N + G + D +
Sbjct: 483 ------------------------------------PDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 308 VFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
+F + + +++ +MI F K+GL +EA LF M DG PD+ T +
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP-----LPDSGTYNTL 561
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
+ A G + M R+ + YG + D+L G LD+ G +E
Sbjct: 562 IRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLVTDML-HDGRLDK--GFLE 611
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 171/408 (41%), Gaps = 61/408 (14%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSA------------- 123
PS N ++ G+ + ++V QMV +P+ T++ L+
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 124 ----CVRG-------------GLLREGEQVHGIVLV----KGYC-SNVFVETNLINFYAG 161
V+G GL + GE + L+ KG ++V + + +I+
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 162 RGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVS 213
V+ A ++F M + V +++S+++ + G + A R+ +M R NVV+
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
+ ++I A++G+ +A LF EM + ++ L + I
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT--- 369
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAK 329
++ P V N LI+ + + D ++F M +R +TV++T++I F +
Sbjct: 370 --LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
A +FK MVS DGV P+ +T +L C G +++ +F + ++ +
Sbjct: 428 ASDCDNAQMVFKQMVS-----DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KM 481
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL---KPNDALWGALLGG 434
P I Y M + + +AG +++ L ++ L KP+ + ++ G
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 159/408 (38%), Gaps = 61/408 (14%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
PS + ++ GY +V QMV P+ T++ L+ GL +
Sbjct: 78 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH-----GLFLHNKAS 132
Query: 137 HGIVLV-----KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG----QRSVVSWNSIL 187
+ LV +G N+ ++N RG ++ A ++ + M + VV +N+I+
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 188 AGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
D A +F EM + NVV+++++I+ GR A L +M ++
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV--------------------ARNQQQ 283
G +H + +R + + +Q
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 284 ----------PSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAK 329
P + N LI + + D ++F +M R TV++T++I
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
G A +FK MVS DGV PD +T ++L C+ G +++ +F M ++ I
Sbjct: 373 DGDCDNAQKVFKQMVS-----DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-I 426
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL---KPNDALWGALLGG 434
I Y M++ + +AG +D+ L ++ L KPN + ++ G
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 134/310 (43%), Gaps = 17/310 (5%)
Query: 48 TNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVS 107
+++I+ L S+ SD Q + NP+ +N +I + + ++ + + M+
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 108 TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQ 167
+P+ FTY+ L++ L + +Q+ ++ K ++ LI + VE
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 168 ARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIA 219
+F M R V++ +++ G GD D A++VF +M ++++++ ++
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 220 GCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
G G+ ++AL +F M+++ ++ G + G + + + V
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV-- 461
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM----PQRSTVSWTSMIMAFAKQGLGKE 335
+P+V N +I S ++ +AY + KM P + ++ ++I A + G
Sbjct: 462 ---KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 336 ALGLFKTMVS 345
+ L + M S
Sbjct: 519 SAELIREMRS 528
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 141/360 (39%), Gaps = 62/360 (17%)
Query: 39 VVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKS 98
VV+NGL ++ +I L+F + +K+ + ++N II + +
Sbjct: 155 VVVNGLCKRGDID---LAFNLL-------NKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 99 VECYRQMVSTEAEPNGFTYSFLLS-----------------------------------A 123
+ +++M + PN TYS L+S A
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV-- 181
V+ G E E++H ++ + ++F +LIN + +++A+ +F+ M +
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 182 --SWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFG 235
++N+++ G+ + +F EM R + V++TT+I G G C A +F
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
+M V G L+ + Y+Q +++ + + + +I
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-----KSEIKLDIYIYTTMIEG 439
Query: 296 YASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
G + D + +F + + + V++ +MI + L +EA L K M DG D
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 147/383 (38%), Gaps = 28/383 (7%)
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
+N +I + R ++ +M+ EP+ T S LL+ G + + + +
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDF 196
+ GY + T LI+ +A + D M QR ++V++ ++ G GD
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 197 DGARRVFDEMPI----RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
D A + ++M +VV + T+I + AL+LF EM +
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
GRW + + P++ NALI + G +A ++ M
Sbjct: 227 ISCLCSY-----GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 313 PQRS----TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
+RS ++ S+I F +A +F+ MVS PD T ++ C
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC-----FPDLDTYNTLIKGFC 336
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPND 425
+ V++G +F M+ G+ Y ++ L G D A + + M + P+
Sbjct: 337 KSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 426 ALWGALLGGCQIHKNSELASVVE 448
+ LL G + N +L +E
Sbjct: 396 MTYSILLDG--LCNNGKLEKALE 416
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 171/407 (42%), Gaps = 35/407 (8%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVWNHIIRGYARSHTPWKSVECYRQM 105
+ +LS+ + A +L S +++ P+ +N+++ G+ R + + +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 106 VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGV 165
+ +PN +TYS L+ C R + +V + N V +IN G
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 166 EQARHVFDGMGQR-----SVVSWNSILAGYVSCGDFDGARRVFDEM------PIRNVVSW 214
+AR + M + S +S+NSI+ G+ G+ D A ++EM P NV+++
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISP--NVITY 622
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
T+++ G + R QAL + EM+ V+ +++ + + +
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLE 682
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV----SWTSMIMAFAKQ 330
N QP + N+LI + + G + A ++ KM + ++T++I K
Sbjct: 683 E--GLNPSQP---IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G L L + ++ V G+ PD I V++ G + ++F M + ++
Sbjct: 738 G----NLILASELYTEMQAV-GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN-NVT 791
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK---PNDALWGALLGG 434
P + Y ++ R G LDEA L + M K P+ A + L+ G
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 169/438 (38%), Gaps = 42/438 (9%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID----NPSTTVWNHIIRG 88
+Q+ GLS KT + ++S S + A LF + P T +N +++G
Sbjct: 289 LQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKG 348
Query: 89 YARSHTPWKSVECY-RQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCS 147
Y ++ P K E +M P+ TYS L+ A V G V +
Sbjct: 349 YVKT-GPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS----WNSILAGYVSCGDFDGARRVF 203
N FV + L+ + RG ++ V M V +N ++ + D A F
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 204 DEM------PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
D M P R V+W T+I + GR A +F M R
Sbjct: 468 DRMLSEGIEPDR--VTWNTLIDCHCKHGRHIVAEEMFEAMER---RGCLPCATTYNIMIN 522
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQ---PSVRLNNALIHMYASCGVIGDAYQVFTKMP- 313
GD + W +R++ + + Q P+V + L+ +Y G DA + +M
Sbjct: 523 SYGDQE-----RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 314 ---QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+ S+ + ++I A+A++GL ++A+ F+ M S DG++P + L ++ A
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS-----DGLKPSLLALNSLINAFGED 632
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL---KPNDAL 427
E + M G+ P + Y ++ L R + + E M + KP+
Sbjct: 633 RRDAEAFAVLQYMKEN-GVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKA 691
Query: 428 WGALLGGCQIHKNSELAS 445
L + K + AS
Sbjct: 692 RSMLRSALRYMKQTLRAS 709
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 201/512 (39%), Gaps = 71/512 (13%)
Query: 40 VLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN----PSTTVWNHIIRGYARSHTP 95
V S + +L Y +++A +F + N PS N ++ R
Sbjct: 147 VFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGEN 206
Query: 96 WKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG-------LLREGEQVHGI--------V 140
+ ++ Y QM+S E P+ FT S +++A R G +E E G+
Sbjct: 207 FVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNS 266
Query: 141 LVKGYC---------------------SNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
L+ GY NV T+LI Y +G +E+A HVF+ + ++
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 180 VVS----WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
+V+ + ++ GY G A RV D M I V T I G CK +
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNM-IEIGVRTNTTICNSLINGYCKSGQLVEA 385
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRI-----VARNQQQPSVRLNN 290
E +R+ G + G YV + + + + + P+V N
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDGYCRAG-----YVDEALKLCDQMCQKEVVPTVMTYN 440
Query: 291 ALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
L+ Y+ G D ++ M +R +S ++++ A K G EA+ L++ +++
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA- 499
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
G+ D ITL V++ C V+E + I ++N + P ++ Y + +
Sbjct: 500 ----RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN-IFRCKPAVQTYQALSHGYYKV 554
Query: 407 GFLDEAHGLIENMPLK---PNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGY 463
G L EA + E M K P ++ L+ G +++ + + +L A T A Y
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 464 LVLLS---NIYAFAKRWQDVIAVRQKMIEMGV 492
L++ NI K + + +K I + V
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNV 646
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 120/280 (42%), Gaps = 49/280 (17%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
P+ + +I + + ++++ Y +M +P+ FTY+ L++ G + E +Q+
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV----SWNSILAGYVS 192
+++ KG +V LIN + V++ +F M QR +V ++N+I+ GY
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 193 CGDFDGARRVFDEMPIR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
G D A+ +F M R N+ +++ ++ G R ++AL LF M+++ +E
Sbjct: 362 AGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL------- 414
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
+ N +IH G + DA+ +F
Sbjct: 415 ---------------------------------DITTYNIVIHGMCKIGNVEDAWDLFRS 441
Query: 312 MP----QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
+ + VS+T+MI F ++ ++ L++ M DG
Sbjct: 442 LSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 151/389 (38%), Gaps = 70/389 (17%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
PS ++ ++ A+S + + M + ++Y+ +++ R V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG---------MGQR-SVVSWNSI 186
G ++ GY +V ++LIN G Q VFD MG R VV +N+I
Sbjct: 127 VGKMMKFGYEPDVVTVSSLIN------GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI 180
Query: 187 LAGYVSCGDFDGARRVFDEMP---IR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
+ G G + A +FD M +R + V++ +++AG GR A L +M
Sbjct: 181 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM----- 235
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
V + IV P+V A+I ++ G
Sbjct: 236 -----------------------------VMRDIV------PNVITFTAVIDVFVKEGKF 260
Query: 303 GDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
+A +++ +M +R ++ S+I G EA + MV+ G PD +
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC-----LPDVV 315
Query: 359 TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
T ++ C + VDEG ++F M + + I Y ++ +AG D A +
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYFQAGRPDAAQEIFSR 374
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVV 447
M +PN + LL G ++ E A V+
Sbjct: 375 MDSRPNIRTYSILLYGLCMNWRVEKALVL 403
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 147/341 (43%), Gaps = 22/341 (6%)
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
+ L+ ++ S P +N IIRG + ++ E R + EP+ +Y+ LL
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
A + G EGE++ + + NV + LI G +E+A ++ M ++ +
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 182 ----SWNSILAGYVSCGDFDGARRVFDEM----PIRNVVSWTTMIAGCAQKGRCKQALSL 233
S++ ++A + G D A + M + ++V++ T++A + G+ QAL +
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
FG++ GD K+ R +H ++ + N P N++I
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGD-KI-RALHMILE---MMSNGIDPDEITYNSMI 480
Query: 294 HMYASCGVIGDAYQVFTKMP----QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
G++ +A+++ M S V++ +++ F K ++A+ + ++MV +G
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC- 539
Query: 350 VDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
RP+ T V++ AG+ E + + R IS
Sbjct: 540 ----RPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 15/225 (6%)
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMAFAKQGLGKEALG 338
QP V NALI+ + I DA +V +M + TV++ MI + +G AL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 339 LFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGC 398
+ ++SD +P IT +++ A G VDE ++ M + G+ P + Y
Sbjct: 215 VLNQLLSDNC-----QPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNT 268
Query: 399 MVDLLSRAGFLDEAHGLIENMPLK---PNDALWGALLGGCQIHKNSELASVVEPKLVAEL 455
++ + + G +D A ++ N+ LK P+ + LL E + K+ +E
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 456 DTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
Y +L++ + K ++ + + + M E G+ P S+
Sbjct: 329 CDPNVVTYSILITTLCRDGK-IEEAMNLLKLMKEKGL-TPDAYSY 371
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 48 TNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVS 107
+++IT L +D + H++ S NP+ ++ +I YA+ K Y+ M+
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ 146
Query: 108 TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQ 167
+PN FTYS L+ + E ++ +++ KG NV + L N + V+
Sbjct: 147 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 168 ARHVFDGMGQRSV----VSWNSILAGYVSCGDFDGARRVFDEMP----IRNVVSWTTMIA 219
+ D M QR V VS N+++ GY G D A VF M I N+ S+ ++A
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 220 GCAQKGRCKQALSLFGEMRRAR 241
G G ++ALS F M++ R
Sbjct: 267 GLFANGEVEKALSRFEHMQKTR 288
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 141/360 (39%), Gaps = 60/360 (16%)
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRG 163
+M+ EP+ T S L++ +++ V G + G +V V+T LI+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 164 GVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWT 215
V A V M R +VV+++S++ G G A R EM + NV++++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 216 TMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR 275
+I A++G+ + S++ M + ++ L G +H V +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTY----------SSLIYGLCMHNRVDEA 172
Query: 276 IVARNQQ-----QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIMA 326
I + P+V + L + + + D ++ MPQR +TVS ++I
Sbjct: 173 IKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKG 232
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRP------------------------------- 355
+ + G ALG+F M S+G + +R
Sbjct: 233 YFQAGKIDLALGVFGYMTSNGL-IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL 291
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
D IT +++ C A V E +F + + + P + Y M+ L+RAG EA L
Sbjct: 292 DIITYTIMIHGMCKACMVKEAYDLFYKL-KFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 155/370 (41%), Gaps = 52/370 (14%)
Query: 44 LSQKTNIIT--KLLSFYIASDQLQHAHKLFSTIDN----PSTTVWNHIIRGYARSHTPWK 97
L + +I+T LL+ + ++ Q A L ++D P+ ++N +I G ++
Sbjct: 143 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN 202
Query: 98 SVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLIN 157
++E + M + TY+ L+S G + ++ ++ + NV T LI+
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 158 FYAGRGGVEQARHVFDGMGQRSVV----SWNSILAGYVSCGDFDGARRVFDEMPIR---- 209
+ G + +AR+++ M +RSVV ++NS++ G+ G A+ +FD M +
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD-LKLGRWI 268
+VV++ T+I G + R + + LF EM GD I
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEM----------------TYQGLVGDAFTYNTLI 366
Query: 269 HWYVQ-------QRIVARNQQ---QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS-- 316
H Y Q Q++ R P + N L+ + G I A V + Q+S
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL-VMVEDLQKSEM 425
Query: 317 ---TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+++ +I + KEA LF+++ G V+PDAI I ++ C G
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG-----VKPDAIAYITMISGLCRKGLQ 480
Query: 374 DEGRRIFASM 383
E ++ M
Sbjct: 481 READKLCRRM 490
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 132/322 (40%), Gaps = 27/322 (8%)
Query: 38 QVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWK 97
V+NGL + ++ L FY + A +N +I G + S
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRA----------DAVTYNTLISGLSNSGRWTD 237
Query: 98 SVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLIN 157
+ R MV + +PN ++ L+ V+ G L E ++ ++ + NVF +LIN
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 158 FYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV- 212
+ G + A+++FD M + VV++N+++ G+ + ++F EM + +V
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 213 ---SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
++ T+I G Q G+ A +F M V G ++
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE-----K 412
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR----STVSWTSMIM 325
V + +++ + N +I + +A+ +F + ++ +++ +MI
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 326 AFAKQGLGKEALGLFKTMVSDG 347
++GL +EA L + M DG
Sbjct: 473 GLCRKGLQREADKLCRRMKEDG 494
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 169/394 (42%), Gaps = 33/394 (8%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
P T NHI+ +R + + Y M E + N +T++ +++ + G L++ +
Sbjct: 188 PKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGF 247
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG----QRSVVSWNSILAGYVS 192
GI+ V G + L+ ++ RG +E AR + M Q + ++N IL+ +
Sbjct: 248 LGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCN 307
Query: 193 CGDFDGARRVFDEM-PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
G R E+ + + VS+ +I GC+ G + A + EM + +
Sbjct: 308 EGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM--------- 358
Query: 252 XXXXXXXXGDLKLGRWIHWYVQ-QRIVARNQQQPSVRLN----NALIHMYASCGVIGDAY 306
L G ++ ++ I+ R ++ + L+ N LI+ Y G A+
Sbjct: 359 -VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF 417
Query: 307 QVFTKMP----QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
+ +M Q + ++TS+I ++ +EA LF+ +V G++PD + +
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG-----KGMKPDLVMMNT 472
Query: 363 VLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP-- 420
++ C G +D + M+ I+P Y C++ L G +EA L+ M
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMD-MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Query: 421 -LKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
+KP+ + L+ G +++ A +V ++++
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS 565