Miyakogusa Predicted Gene

Lj4g3v1658720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1658720.1 Non Chatacterized Hit- tr|I3S6Q9|I3S6Q9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.29,0,rpe:
ribulose-phosphate 3-epimerase,Ribulose-phosphate 3-epimerase-like;
Ribul_P_3_epim,Ribulose-pho,CUFF.49585.1
         (283 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61410.2 | Symbols: RPE | D-ribulose-5-phosphate-3-epimerase ...   491   e-139
AT5G61410.1 | Symbols: RPE, EMB2728 | D-ribulose-5-phosphate-3-e...   491   e-139
AT3G01850.2 | Symbols:  | Aldolase-type TIM barrel family protei...   159   3e-39
AT3G01850.1 | Symbols:  | Aldolase-type TIM barrel family protei...   159   3e-39
AT1G63290.1 | Symbols:  | Aldolase-type TIM barrel family protei...   147   6e-36

>AT5G61410.2 | Symbols: RPE | D-ribulose-5-phosphate-3-epimerase |
           chr5:24684085-24685836 REVERSE LENGTH=281
          Length = 281

 Score =  491 bits (1263), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 242/282 (85%), Positives = 259/282 (91%), Gaps = 4/282 (1%)

Query: 2   AATSLCSSTLQSQINGPSSLHSKTAIFNNHPRSLTFSRRKISTIVKASSRVDKFSKSDII 61
           +A SLC S+  +Q+NG      ++ ++   P S +FSRR+   IVKASSRVD+FSKSDII
Sbjct: 4   SAASLCCSS--TQVNGFGLRPERSLLY--QPTSFSFSRRRTHGIVKASSRVDRFSKSDII 59

Query: 62  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 121
           VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL+VDALRPVTDLPLD
Sbjct: 60  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 119

Query: 122 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLS 181
           VHLMIVEPEQRVPDFIKAGADIVS+HCEQ STIHLHRTVNQ+KSLGAKAGVVLNPGTPLS
Sbjct: 120 VHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLS 179

Query: 182 AIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPAN 241
           AIEYVLD+VDLVLIMSVNPGFGGQSFIESQVKKISDLR++CAEKGVNPWIEVDGGVTPAN
Sbjct: 180 AIEYVLDMVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPAN 239

Query: 242 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEPVAV 283
           AYKVIEAGANALVAGSAVFGAKDYAEAIKGIK SKRP  VAV
Sbjct: 240 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPAAVAV 281


>AT5G61410.1 | Symbols: RPE, EMB2728 |
           D-ribulose-5-phosphate-3-epimerase |
           chr5:24684085-24685836 REVERSE LENGTH=281
          Length = 281

 Score =  491 bits (1263), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 242/282 (85%), Positives = 259/282 (91%), Gaps = 4/282 (1%)

Query: 2   AATSLCSSTLQSQINGPSSLHSKTAIFNNHPRSLTFSRRKISTIVKASSRVDKFSKSDII 61
           +A SLC S+  +Q+NG      ++ ++   P S +FSRR+   IVKASSRVD+FSKSDII
Sbjct: 4   SAASLCCSS--TQVNGFGLRPERSLLY--QPTSFSFSRRRTHGIVKASSRVDRFSKSDII 59

Query: 62  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 121
           VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL+VDALRPVTDLPLD
Sbjct: 60  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 119

Query: 122 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLS 181
           VHLMIVEPEQRVPDFIKAGADIVS+HCEQ STIHLHRTVNQ+KSLGAKAGVVLNPGTPLS
Sbjct: 120 VHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLS 179

Query: 182 AIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPAN 241
           AIEYVLD+VDLVLIMSVNPGFGGQSFIESQVKKISDLR++CAEKGVNPWIEVDGGVTPAN
Sbjct: 180 AIEYVLDMVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPAN 239

Query: 242 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEPVAV 283
           AYKVIEAGANALVAGSAVFGAKDYAEAIKGIK SKRP  VAV
Sbjct: 240 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPAAVAV 281


>AT3G01850.2 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr3:300428-301987 REVERSE LENGTH=225
          Length = 225

 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 132/217 (60%), Gaps = 8/217 (3%)

Query: 62  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 121
           ++PS+LS++FA L  +   +   G +W+H+D+MDG FVPN+TIG  ++++LR  T+  LD
Sbjct: 6   IAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYLD 65

Query: 122 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLS 181
            HLM+  P   V    KAGA   + H E +   +  + V ++KS G + GV L PGTP+ 
Sbjct: 66  CHLMVTNPMDYVAQMAKAGASGFTFHVEVAQD-NWQQLVEKIKSTGMRPGVALKPGTPVE 124

Query: 182 AIEYVLD---VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVT 238
            +  +++    V++VL+M+V PGFGGQ F+   + K+  LR    +K     I+VDGG+ 
Sbjct: 125 QVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVRALR----QKYPTLDIQVDGGLG 180

Query: 239 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 275
           P+       AGAN +VAGS+VFGA +  + I  ++TS
Sbjct: 181 PSTIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTS 217


>AT3G01850.1 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr3:300428-301987 REVERSE LENGTH=225
          Length = 225

 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 132/217 (60%), Gaps = 8/217 (3%)

Query: 62  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 121
           ++PS+LS++FA L  +   +   G +W+H+D+MDG FVPN+TIG  ++++LR  T+  LD
Sbjct: 6   IAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYLD 65

Query: 122 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLS 181
            HLM+  P   V    KAGA   + H E +   +  + V ++KS G + GV L PGTP+ 
Sbjct: 66  CHLMVTNPMDYVAQMAKAGASGFTFHVEVAQD-NWQQLVEKIKSTGMRPGVALKPGTPVE 124

Query: 182 AIEYVLD---VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVT 238
            +  +++    V++VL+M+V PGFGGQ F+   + K+  LR    +K     I+VDGG+ 
Sbjct: 125 QVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVRALR----QKYPTLDIQVDGGLG 180

Query: 239 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 275
           P+       AGAN +VAGS+VFGA +  + I  ++TS
Sbjct: 181 PSTIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTS 217


>AT1G63290.1 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr1:23472095-23473590 REVERSE LENGTH=227
          Length = 227

 Score =  147 bits (372), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 129/217 (59%), Gaps = 8/217 (3%)

Query: 62  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 121
           ++PS+LS++FA L  + K +   G +W+H+D+MDG FV N+TIG  ++++LR  T+  LD
Sbjct: 8   IAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLRKHTNAYLD 67

Query: 122 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLS 181
            HLM+  P   V    KAGA   + H E +   +    V ++K+ G + GV L PGTP+ 
Sbjct: 68  CHLMVTNPMDYVDQMAKAGASGFTFHVEVAQE-NWQELVKKIKAAGMRPGVALKPGTPVE 126

Query: 182 AIEYVLD---VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVT 238
            +  +++    V++VL+M+V PGFGGQ F+ S + K+  LR     K     IEVDGG+ 
Sbjct: 127 QVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMMDKVRALRN----KYPTLDIEVDGGLG 182

Query: 239 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 275
           P+       AGAN +VAGS+VFGA    + I  ++ S
Sbjct: 183 PSTIDAAAAAGANCIVAGSSVFGAPKPGDVISLLRAS 219