Miyakogusa Predicted Gene
- Lj4g3v1648700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1648700.1 tr|B9DFD3|B9DFD3_ARATH AT5G03730 protein
(Fragment) OS=Arabidopsis thaliana GN=AT5G03730 PE=2
SV=1,62.86,1e-18,EDR1,Armadillo repeat-containing protein 3 and
Serine/threonine-protein kinase CTR1; seg,NULL,CUFF.49539.1
(266 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G03730.1 | Symbols: CTR1, SIS1, AtCTR1 | Protein kinase super... 219 2e-57
AT5G03730.2 | Symbols: CTR1, SIS1, AtCTR1 | Protein kinase super... 219 2e-57
AT4G24480.1 | Symbols: | Protein kinase superfamily protein | c... 116 2e-26
AT1G73660.1 | Symbols: | protein tyrosine kinase family protein... 56 2e-08
AT5G11850.1 | Symbols: | Protein kinase superfamily protein | c... 54 1e-07
AT1G08720.1 | Symbols: EDR1, ATEDR1 | Protein kinase superfamily... 49 3e-06
>AT5G03730.1 | Symbols: CTR1, SIS1, AtCTR1 | Protein kinase
superfamily protein | chr5:974958-979660 REVERSE
LENGTH=821
Length = 821
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 122/157 (77%), Gaps = 1/157 (0%)
Query: 111 WAQQTEESYXXXXXXXXXXXXDATCADDPNFLDQAPDESSMRL-PLSPEAVSHRFWVNGC 169
WAQQTEESY +ATCADDPNFLD PDES++R P S E VSHRFWVNGC
Sbjct: 161 WAQQTEESYQLQLALALRLSSEATCADDPNFLDPVPDESALRTSPSSAETVSHRFWVNGC 220
Query: 170 LSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCIDSSLEVVLVDRRS 229
LSY DK+PDGFY+++G+D Y+WT+C DL E+GRIPS+++L++VD +DSSLE ++VDRRS
Sbjct: 221 LSYYDKVPDGFYMMNGLDPYIWTLCIDLHESGRIPSIESLRAVDSGVDSSLEAIIVDRRS 280
Query: 230 DPTLRELQNTVHSISSSSLTTAEVVDHLSKLVCNRMG 266
DP +EL N VH IS S +TT EVVD L+KL+CNRMG
Sbjct: 281 DPAFKELHNRVHDISCSCITTKEVVDQLAKLICNRMG 317
>AT5G03730.2 | Symbols: CTR1, SIS1, AtCTR1 | Protein kinase
superfamily protein | chr5:974958-979660 REVERSE
LENGTH=821
Length = 821
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 122/157 (77%), Gaps = 1/157 (0%)
Query: 111 WAQQTEESYXXXXXXXXXXXXDATCADDPNFLDQAPDESSMRL-PLSPEAVSHRFWVNGC 169
WAQQTEESY +ATCADDPNFLD PDES++R P S E VSHRFWVNGC
Sbjct: 161 WAQQTEESYQLQLALALRLSSEATCADDPNFLDPVPDESALRTSPSSAETVSHRFWVNGC 220
Query: 170 LSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCIDSSLEVVLVDRRS 229
LSY DK+PDGFY+++G+D Y+WT+C DL E+GRIPS+++L++VD +DSSLE ++VDRRS
Sbjct: 221 LSYYDKVPDGFYMMNGLDPYIWTLCIDLHESGRIPSIESLRAVDSGVDSSLEAIIVDRRS 280
Query: 230 DPTLRELQNTVHSISSSSLTTAEVVDHLSKLVCNRMG 266
DP +EL N VH IS S +TT EVVD L+KL+CNRMG
Sbjct: 281 DPAFKELHNRVHDISCSCITTKEVVDQLAKLICNRMG 317
>AT4G24480.1 | Symbols: | Protein kinase superfamily protein |
chr4:12650410-12654755 FORWARD LENGTH=956
Length = 956
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
Query: 156 SPEAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPC 215
S E++S+RFWV+GCLSYSDKI DGFY I GMD Y+W +C + ++ RIPS+ LK +P
Sbjct: 277 STESISYRFWVSGCLSYSDKISDGFYSILGMDPYLWLMCNNSEDGKRIPSLLLLKETEPN 336
Query: 216 IDSSLEVVLVDRRSDPTLRELQNTVHSISSSSLTTAEVVDHLSKLVCNRMG 266
D+S+EVVL+DRR D L+EL++ H + SS +V+ L +LV MG
Sbjct: 337 -DTSMEVVLIDRREDSRLKELEDKAHELYCSSDNMLVLVEKLGRLVAVYMG 386
>AT1G73660.1 | Symbols: | protein tyrosine kinase family protein |
chr1:27692247-27696718 REVERSE LENGTH=1030
Length = 1030
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 158 EAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCID 217
E +++R+W CL Y DKI DGFY ++G+ + RIP + L+
Sbjct: 180 ELIAYRYWNYNCLGYDDKILDGFYDLYGV--------LNASSAERIPPLLDLQGTPVSDG 231
Query: 218 SSLEVVLVDRRSDPTLRELQNTV-------HSISSSSLTTAEVVDHLSKLVCNRMG 266
+ E VLV+R D L L+ S+SSS +E+V L+ LV + MG
Sbjct: 232 VTWEAVLVNRSGDSNLLRLEQMALDIAAKSRSVSSSGFVNSELVRKLAILVGDYMG 287
>AT5G11850.1 | Symbols: | Protein kinase superfamily protein |
chr5:3816632-3821024 REVERSE LENGTH=880
Length = 880
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 160 VSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCIDSS 219
+S R+W + ++Y K+ DGFY ++G+ S + G++P + L+++ +
Sbjct: 143 LSLRYWGHKVINYDQKVRDGFYDVYGITSNSLS-------QGKMPLLVDLQAISISDNVD 195
Query: 220 LEVVLVDRRSDPTLRELQNTVHSISSS------SLTTAEVVDHLSKLVCNRMG 266
EV+LV+R DP L+EL+ V +++S ++++ ++ +V +MG
Sbjct: 196 YEVILVNRLIDPELQELERRVFALASECPDFAPGQVSSDLTQKIANIVVEQMG 248
>AT1G08720.1 | Symbols: EDR1, ATEDR1 | Protein kinase superfamily
protein | chr1:2774089-2779077 FORWARD LENGTH=933
Length = 933
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 158 EAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCID 217
+ +S ++W G L Y +K+ D FY V+++ TD + G +PS++ L+S
Sbjct: 130 QRLSRQYWEYGVLDYEEKVVDSFY-------DVYSLSTDSAKQGEMPSLEDLESNHGT-- 180
Query: 218 SSLEVVLVDRRSDPTLRELQNTVHSIS--SSSLTTAEVVDHLSKLVCNRMG 266
E V+V+R D +L EL I+ S+ + + +V L++LV MG
Sbjct: 181 PGFEAVVVNRPIDSSLHELLEIAECIALGCSTTSVSVLVQRLAELVTEHMG 231