Miyakogusa Predicted Gene
- Lj4g3v1635320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1635320.1 Non Chatacterized Hit- tr|I1JZP1|I1JZP1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,83.85,0,seg,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide
repea,gene.g55382.t1.1
(653 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 749 0.0
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 427 e-119
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-119
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 423 e-118
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 420 e-117
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 419 e-117
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-115
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 413 e-115
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 411 e-115
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 405 e-113
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 404 e-113
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 393 e-109
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 390 e-108
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 389 e-108
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 384 e-107
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 379 e-105
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 379 e-105
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 374 e-103
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 372 e-103
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 369 e-102
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 364 e-101
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-100
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 1e-99
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 360 2e-99
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 360 2e-99
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 2e-98
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 3e-96
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 7e-96
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 4e-95
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 345 8e-95
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 344 1e-94
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 343 2e-94
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 343 3e-94
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 342 5e-94
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 3e-93
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 335 8e-92
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 5e-91
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 3e-90
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 6e-90
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 1e-86
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 7e-86
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 311 1e-84
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 9e-84
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 8e-82
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 5e-81
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 5e-81
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 298 7e-81
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 295 8e-80
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 4e-79
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 9e-79
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 286 2e-77
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 4e-76
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 4e-76
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 7e-76
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 6e-75
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 269 4e-72
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 267 2e-71
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 1e-70
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 4e-70
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 259 5e-69
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 256 5e-68
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 8e-68
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 254 1e-67
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 7e-67
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 1e-66
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 4e-66
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 4e-65
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 8e-65
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 8e-65
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 4e-63
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 8e-63
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 238 1e-62
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 2e-61
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 2e-61
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 7e-61
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 230 2e-60
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 6e-60
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 6e-59
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 224 1e-58
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 8e-58
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 220 3e-57
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 214 1e-55
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 1e-53
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 207 2e-53
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 5e-53
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 8e-53
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 2e-52
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 5e-51
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 3e-50
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 4e-50
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 5e-50
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 7e-48
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 8e-48
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 8e-48
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 5e-47
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 180 3e-45
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 1e-43
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 3e-42
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 4e-38
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 9e-33
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 6e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 9e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 86 9e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 86 1e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 84 4e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 83 6e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 4e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 5e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 77 5e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 76 6e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 73 6e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 7e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 5e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 66 8e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 66 8e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 66 9e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 65 1e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 64 4e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 63 7e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 63 8e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 62 1e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 60 3e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 60 3e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 60 5e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 6e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 6e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 55 2e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 4e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 53 6e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 53 7e-07
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 53 7e-07
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/583 (61%), Positives = 448/583 (76%), Gaps = 4/583 (0%)
Query: 75 SHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRF 134
S + ++S I S + K HL QIHA ++ T+L+ + V HFLSR+ALS +D YS R
Sbjct: 9 SGDDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRV 68
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRG-IAANPLSSSFAVKSCIRFLD 193
F Q P +SH NTMIRA+S+S +P +G L+R +RR + ANPLSSSFA+K CI+ D
Sbjct: 69 FSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGD 128
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
++GG+Q+H +F DG SDSLL+T +MDLYS C DACKVFDE+P+RDTV+WNV+ SC
Sbjct: 129 LLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSC 188
Query: 254 CVRNNRTRDALSLFDVMQSTSNKC-EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
+RN RTRD L LFD M++ + C +PD VT +L+FG+++H++I E G
Sbjct: 189 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 248
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
GA+NLSN+L++MYSRCG +DKAY+VF G ++VVSW+A+ISGLA+NG+GKEAIEAF E
Sbjct: 249 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 308
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM-IGEFGITPNIHHYGCMVDLLGRA 431
M + GI P++QT TG+LSACSHSGLV EGM FFDRM GEF I PN+HHYGC+VDLLGRA
Sbjct: 309 MLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRA 368
Query: 432 GLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLL 491
LLDKAY +I +M +KPD TIWRTLLGACR+HG V LGERVI LIELKA+EAGDYVLLL
Sbjct: 369 RLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLL 428
Query: 492 NIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLD 551
N YS+ G WEKV E+R+LMKEK I T PGC IEL+G VHEF+VDDVSH RK EIY+ L
Sbjct: 429 NTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLA 488
Query: 552 DINKQLKIAGYVVELSSELHKVD-DKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNV 610
+IN+QLKIAGYV E++SELH ++ ++EKGY L YHSEKLAIAFG+L TPPGTT+RV N+
Sbjct: 489 EINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNL 548
Query: 611 RVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
R CVDCHNF K S VY+R VI+RD RFHHF+GG CSC+D+W
Sbjct: 549 RTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/525 (40%), Positives = 328/525 (62%), Gaps = 4/525 (0%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+++ F++I V +N MI Y+ + + ++ L L++DM + + + + V +C +
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
I G QVH + G S+ ++ A++DLYS+C + + AC +F+ +P +D ++WN +
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
I N ++AL LF M + P+DVT +++ G IH YI +R
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGET--PNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 311 --GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
G A +L SLI MY++CG ++ A++VF +KS+ SW+AMI G A++G + +
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
F M++IGI+PDD TF G+LSACSHSG++D G F M ++ +TP + HYGCM+DLL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYV 488
G +GL +A E+I M ++PD IW +LL AC++HG+V LGE E LI+++ + G YV
Sbjct: 517 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 576
Query: 489 LLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYE 548
LL NIY+SAG W +VA+ R L+ +K ++ PGC +IE+ VVHEF++ D H R EIY
Sbjct: 577 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 636
Query: 549 TLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVAT 608
L+++ L+ AG+V + S L +++++ K L +HSEKLAIAFG+++T PGT L +
Sbjct: 637 MLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVK 696
Query: 609 NVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
N+RVC +CH KL S +Y R++I RD RFHHFR G CSC+DYW
Sbjct: 697 NLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 212/470 (45%), Gaps = 46/470 (9%)
Query: 68 PISSFPPS---HKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGP 124
P SS PP +S + + L IHA ++ L H+ +L L + P
Sbjct: 21 PSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGL-HNTNYALSKLIEFCILSP 79
Query: 125 -LQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSF 183
+ Y+ F+ I P + +NTM R +++S P L LY M G+ N + F
Sbjct: 80 HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 139
Query: 184 AVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFD------ 237
+KSC + G Q+H +V K G D + T+++ +Y Q + +DA KVFD
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 238 -------------------------EMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
E+P +D V+WN MIS ++AL LF M
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
T+ + PD+ T S+E G ++H +I + G+G + + N+LI +YS+CG L
Sbjct: 260 TNVR--PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
+ A +F P K V+SW+ +I G KEA+ F+EM R G P+D T +L AC
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377
Query: 393 SHSGLVDEGM---SFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPD 449
+H G +D G + D+ + G+T ++D+ + G ++ A++V ++ K
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 450 PTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGH 499
+ W ++ +HG + R+ ++ Q D + + + S+ H
Sbjct: 436 SS-WNAMIFGFAMHGRADASFDLFSRMRKIGIQP--DDITFVGLLSACSH 482
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/616 (37%), Positives = 341/616 (55%), Gaps = 35/616 (5%)
Query: 71 SFPPSHK-EQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPI 129
SF H + +S ++ S++ L QIHA ++ T L+ D FLS S
Sbjct: 7 SFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 130 YSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
Y++ F+ +RP +N MIR +S SD P++ L LY+ M N + +K+C
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYS------------------------- 224
Q+H + K G+++D + ++++ Y+
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 225 ------QCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
+ K D A +F +M +++ ++W MIS V+ + ++AL LF MQ++ E
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD--VE 244
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEV 338
PD+V+ +LE G+ IH+Y+ + L LI MY++CG +++A EV
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 339 FMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLV 398
F KSV +W+A+ISG A +G+G+EAI F EMQ++GI+P+ TFT VL+ACS++GLV
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 399 DEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLG 458
+EG F M ++ + P I HYGC+VDLLGRAGLLD+A I M +KP+ IW LL
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 459 ACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTT 518
ACRIH ++ LGE + E LI + G YV NI++ W+K AE R LMKE+ +
Sbjct: 425 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 484
Query: 519 PGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHK-VDDKE 577
PGC TI L+G HEF+ D SH +I + ++L+ GYV EL L VDD E
Sbjct: 485 PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDE 544
Query: 578 KGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHK 637
+ ++ HSEKLAI +G++ T PGT +R+ N+RVC DCH KL S +Y RD+++RD
Sbjct: 545 REAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRT 604
Query: 638 RFHHFRGGQCSCSDYW 653
RFHHFR G+CSC DYW
Sbjct: 605 RFHHFRDGKCSCGDYW 620
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/583 (38%), Positives = 346/583 (59%), Gaps = 10/583 (1%)
Query: 78 EQVISTIKS--VSQKPHLLQIHAH-IVCTTLVHDPAVSLHFLSRVALSGPLQDPI-YSRR 133
E+ I+ +++ VS L QIHA I + D + H + + +S P P+ Y+ +
Sbjct: 16 EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYL-VSLPSPPPMSYAHK 74
Query: 134 FFEQINRPI-VSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA-NPLSSSFAVKSCIRF 191
F +I +PI V +NT+IR Y+ + LYR+MR G+ + + F +K+
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 192 LDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMI 251
D+ G +H V + G S + +++ LY+ C A KVFD+MP++D VAWN +I
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 194
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG 311
+ N + +AL+L+ M S K PD T +L G+R+H Y+++ G
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIK--PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 252
Query: 312 YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
++ SN L+ +Y+RCG +++A +F +K+ VSW+++I GLAVNG+GKEAIE F+
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Query: 372 EMQRI-GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
M+ G+ P + TF G+L ACSH G+V EG +F RM E+ I P I H+GCMVDLL R
Sbjct: 313 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 372
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLL 490
AG + KAYE I +M ++P+ IWRTLLGAC +HG L E ++++L+ +GDYVLL
Sbjct: 373 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLL 432
Query: 491 LNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETL 550
N+Y+S W V ++R M ++ PG +E+ VHEF++ D SH + IY L
Sbjct: 433 SNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKL 492
Query: 551 DDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNV 610
++ +L+ GYV ++S+ V+++EK + YHSEK+AIAF +++TP + + V N+
Sbjct: 493 KEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNL 552
Query: 611 RVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
RVC DCH +KL S VYNR++++RD RFHHF+ G CSC DYW
Sbjct: 553 RVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 326/563 (57%), Gaps = 4/563 (0%)
Query: 92 HLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIR 151
L+QI A+ + + + D + ++ S Y+R FE ++ P + FN+M R
Sbjct: 44 ELMQIQAYAI-KSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMAR 102
Query: 152 AYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQS 211
YS +P + L+ ++ GI + + +K+C + G Q+HC K G
Sbjct: 103 GYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDD 162
Query: 212 DSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQ 271
+ + ++++Y++C D A VFD + + V +N MI+ R NR +ALSLF MQ
Sbjct: 163 NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
K P+++T SL+ G+ IH Y + + + ++ +LI M+++CG
Sbjct: 223 GKYLK--PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 332 LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
LD A +F K +WSAMI A +G ++++ FE M+ ++PD+ TF G+L+A
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
CSH+G V+EG +F +M+ +FGI P+I HYG MVDLL RAG L+ AYE I + + P P
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPM 400
Query: 452 IWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
+WR LL AC H ++ L E+V ER+ EL GDYV+L N+Y+ WE V +R +MK
Sbjct: 401 LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMK 460
Query: 512 EKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELH 571
++ PGC +IE+ VVHEF D +++ LD++ K+LK++GYV + S +H
Sbjct: 461 DRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVH 520
Query: 572 -KVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRD 630
++D+EK L YHSEKLAI FG+L TPPGTT+RV N+RVC DCHN KL S ++ R
Sbjct: 521 ANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRK 580
Query: 631 VILRDHKRFHHFRGGQCSCSDYW 653
V+LRD +RFHHF G+CSC D+W
Sbjct: 581 VVLRDVQRFHHFEDGKCSCGDFW 603
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/625 (37%), Positives = 337/625 (53%), Gaps = 20/625 (3%)
Query: 46 HHPVEPAINLAPIPHHKRNQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTL 105
+HP+ + + P+ H +P +S +H +++ S ++ S L Q+HA + TT
Sbjct: 17 YHPMSIGLLVHPLSPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTY 76
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDS-PQKGLY 164
+PA + + LS D Y+ R F+ I +NT+IRA + S ++
Sbjct: 77 PEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFM 136
Query: 165 LYRDMRRRGIAA-NPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLY 223
LYR M RG ++ + + F +K+C G QVHC + K G D + ++ LY
Sbjct: 137 LYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLY 196
Query: 224 SQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVT 283
C D A KVFDEMP+R V+WN MI VR AL LF MQ + EPD T
Sbjct: 197 GSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSF---EPDGYT 253
Query: 284 XXXXXXXXXXXNSLEFGERIHNYIMER---GYGGAINLSNSLIAMYSRCGCLDKAYEVFM 340
SL G H +++ + + + NSLI MY +CG L A +VF
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ 313
Query: 341 GTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM--QRIGIRPDDQTFTGVLSACSHSGLV 398
G + + SW+AMI G A +G +EA+ F+ M +R +RP+ TF G+L AC+H G V
Sbjct: 314 GMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFV 373
Query: 399 DEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLG 458
++G +FD M+ ++ I P + HYGC+VDL+ RAG + +A +++ +M +KPD IWR+LL
Sbjct: 374 NKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLD 433
Query: 459 ACRIHG-HVTLGERVIERLIELKAQE-------AGDYVLLLNIYSSAGHWEKVAEVRTLM 510
AC G V L E + +I K +G YVLL +Y+SA W V VR LM
Sbjct: 434 ACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLM 493
Query: 511 KEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSE- 569
E I+ PGC +IE+ G+ HEF D SH + +IY+ L I+ +L+ GY+ + S
Sbjct: 494 SEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAP 553
Query: 570 -LHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYN 628
+ +D K Y L HSE+LAIAFG++ PP T +R+ N+RVC DCH KL S V+N
Sbjct: 554 LVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFN 613
Query: 629 RDVILRDHKRFHHFRGGQCSCSDYW 653
++I+RD RFHHF+ G CSC DYW
Sbjct: 614 TEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/610 (37%), Positives = 341/610 (55%), Gaps = 51/610 (8%)
Query: 93 LLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPL-QDPIYSRRFFEQINRPIVSHFNTMIR 151
L QIHA + + + D + L A S +D Y+ + F Q+ + +NT+IR
Sbjct: 39 LSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 152 AYSMSDSPQKGLYL---YRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDG 208
+S SD + + + Y M + N + +K+C + I G Q+H K G
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 209 HQSDSLLLTAVMDLYSQCRKGDDA------------------------------------ 232
D +++ ++ +Y C DA
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 233 -----CK----VFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVT 283
CK +FD+M QR V+WN MIS N +DA+ +F M+ P+ VT
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK--GDIRPNYVT 276
Query: 284 XXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTP 343
SLE GE +H Y + G L ++LI MYS+CG ++KA VF P
Sbjct: 277 LVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP 336
Query: 344 NKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMS 403
++V++WSAMI+G A++G +AI+ F +M++ G+RP D + +L+ACSH GLV+EG
Sbjct: 337 RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRR 396
Query: 404 FFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIH 463
+F +M+ G+ P I HYGCMVDLLGR+GLLD+A E I M +KPD IW+ LLGACR+
Sbjct: 397 YFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQ 456
Query: 464 GHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCT 523
G+V +G+RV L+++ ++G YV L N+Y+S G+W +V+E+R MKEK I+ PGC
Sbjct: 457 GNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSL 516
Query: 524 IELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLS 583
I++ GV+HEFVV+D SH + EI L +I+ +L++AGY + L +++++K VL
Sbjct: 517 IDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLH 576
Query: 584 YHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFR 643
YHSEK+A AFG+++T PG +R+ N+R+C DCH+ +KL S VY R + +RD KRFHHF+
Sbjct: 577 YHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQ 636
Query: 644 GGQCSCSDYW 653
G CSC DYW
Sbjct: 637 DGSCSCMDYW 646
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/578 (37%), Positives = 330/578 (57%), Gaps = 10/578 (1%)
Query: 80 VISTIKSVSQKPHLL----QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFF 135
+ S +K+ S P L Q+H H + V D VS + + + +++ + F
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE---AEILF 475
Query: 136 EQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIV 195
E+ N +V+ +N M+ Y+ S K L L+ M ++G ++ + + K+C I
Sbjct: 476 ERHNFDLVA-WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 196 GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCV 255
G QVH K G+ D + + ++D+Y +C A FD +P D VAW MIS C+
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 256 RNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA 315
N A +F M+ PD+ T +LE G +IH ++
Sbjct: 595 ENGEEERAFHVFSQMRLMG--VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND 652
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
+ SL+ MY++CG +D AY +F ++ +W+AM+ GLA +G GKE ++ F++M+
Sbjct: 653 PFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
+GI+PD TF GVLSACSHSGLV E M G++GI P I HY C+ D LGRAGL+
Sbjct: 713 LGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVK 772
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYS 495
+A +I +M+++ +++RTLL ACR+ G G+RV +L+EL+ ++ YVLL N+Y+
Sbjct: 773 QAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYA 832
Query: 496 SAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINK 555
+A W+++ RT+MK ++ PG IE+K +H FVVDD S+++ IY + D+ +
Sbjct: 833 AASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIR 892
Query: 556 QLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVD 615
+K GYV E L V+++EK L YHSEKLA+AFG+L+TPP T +RV N+RVC D
Sbjct: 893 DIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGD 952
Query: 616 CHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
CHN +K + VYNR+++LRD RFH F+ G CSC DYW
Sbjct: 953 CHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 153/359 (42%), Gaps = 11/359 (3%)
Query: 111 VSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHF---NTMIRAYSMSDSPQKGLYLYR 167
++L L+R+ SG D + F + VS N + Y S L +
Sbjct: 247 ITLRLLARI--SGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFA 304
Query: 168 DMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCR 227
DM + + ++ + + ++ + G QVHC K G + +++++Y + R
Sbjct: 305 DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 364
Query: 228 KGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXX 287
K A VFD M +RD ++WN +I+ +N +A+ LF MQ +PD T
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF--MQLLRCGLKPDQYTMTSV 422
Query: 288 XXXXXXX-NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS 346
L +++H + ++ +S +LI YSR C+ +A E+ N
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFD 481
Query: 347 VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFD 406
+V+W+AM++G + G + ++ F M + G R DD T V C +++G
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 407 RMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGH 465
I G ++ ++D+ + G + A ++ V PD W T++ C +G
Sbjct: 542 YAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGE 598
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
+++ I D++ G H + + L+ ++ +YS+C A +VFD+MP RD
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 245 VAWNVMIS-------CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSL 297
V+WN +++ C V N + A LF +++ + +T +
Sbjct: 106 VSWNSILAAYAQSSECVVEN--IQQAFLLFRILR--QDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 298 EFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGL 357
E H Y + G G ++ +L+ +Y + G + + +F P + VV W+ M+
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 358 AVNGYGKEAIEAFEEMQRIGIRPDDQTF 385
G+ +EAI+ G+ P++ T
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
Query: 130 YSRRFFEQI-NRPIVSHFNTMIRAYSMS-----DSPQKGLYLYRDMRRRGIAANPLSSSF 183
Y+RR F+++ +R +VS +N+++ AY+ S ++ Q+ L+R +R+ + + ++ S
Sbjct: 92 YARRVFDKMPDRDLVS-WNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSP 150
Query: 184 AVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRD 243
+K C+ + H K G D + A++++Y + K + +F+EMP RD
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 244 TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVT 283
V WN+M+ + +A+ L S+ P+++T
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG--LNPNEIT 248
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/579 (38%), Positives = 337/579 (58%), Gaps = 10/579 (1%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFL--SRVALSGPLQDPIYSRRFFEQ 137
++ ++ + L +IH+H++ L H P++ H L V+++G L +++ F+
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLS---HAQLLFDH 64
Query: 138 INR-PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSS-SFAVKSCIRFLDIV 195
+ P S +N +IR +S S SP + Y M ++ L + +FA+KSC R I
Sbjct: 65 FDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP 124
Query: 196 GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCV 255
+++H +V + G D+++ T+++ YS + A KVFDEMP RD V+WNVMI C
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFS 184
Query: 256 RNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA 315
ALS++ M C D T ++L G +H +
Sbjct: 185 HVGLHNQALSMYKRM-GNEGVC-GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC 242
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
+ +SN+LI MY++CG L+ A VF G + V++W++MI G V+G+G EAI F +M
Sbjct: 243 VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA 302
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
G+RP+ TF G+L CSH GLV EG+ F+ M +F +TPN+ HYGCMVDL GRAG L+
Sbjct: 303 SGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 362
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYS 495
+ E+I + DP +WRTLLG+C+IH ++ LGE +++L++L+A AGDYVL+ +IYS
Sbjct: 363 NSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYS 422
Query: 496 SAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINK 555
+A + A +R L++ +QT PG IE+ VH+FVVDD H IY L ++
Sbjct: 423 AANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVIN 482
Query: 556 QLKIAGYVVELSSELH-KVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCV 614
+ +AGY E S+ + D+ G + HSEKLAIA+G++ T GTTLR+ N+RVC
Sbjct: 483 RAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCR 542
Query: 615 DCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
DCH+F K S +NR++I+RD RFHHF G CSC+DYW
Sbjct: 543 DCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/616 (37%), Positives = 333/616 (54%), Gaps = 46/616 (7%)
Query: 73 PPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLV---HDPAVSLHFLSRVALSGPLQDPI 129
PP +I +SV + +LQIHA I+ L+ P ++L A G ++
Sbjct: 28 PPEKLAVLIDKSQSVDE---VLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIR--- 81
Query: 130 YSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
+S F Q P + F I S++ + LY + I N + S +KSC
Sbjct: 82 HSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC- 140
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR------- 242
G +H +V K G D + T ++D+Y++ A KVFD MP+R
Sbjct: 141 ---STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTA 197
Query: 243 ------------------------DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
D V+WNVMI ++ DAL LF + + K +
Sbjct: 198 MITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA-EGKPK 256
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEV 338
PD++T +LE G IH ++ + + LI MYS+CG L++A V
Sbjct: 257 PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLV 316
Query: 339 FMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI-GIRPDDQTFTGVLSACSHSGL 397
F TP K +V+W+AMI+G A++GY ++A+ F EMQ I G++P D TF G L AC+H+GL
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376
Query: 398 VDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
V+EG+ F+ M E+GI P I HYGC+V LLGRAG L +AYE I M + D +W ++L
Sbjct: 377 VNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436
Query: 458 GACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
G+C++HG LG+ + E LI L + +G YVLL NIY+S G +E VA+VR LMKEK I
Sbjct: 437 GSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVK 496
Query: 518 TPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKE 577
PG TIE++ VHEF D H + EIY L I++++K GYV ++ L +++ E
Sbjct: 497 EPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETE 556
Query: 578 KGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHK 637
K L HSE+LAIA+G+++T PG+ L++ N+RVC DCH KL S + R +++RD
Sbjct: 557 KEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRN 616
Query: 638 RFHHFRGGQCSCSDYW 653
RFHHF G CSC D+W
Sbjct: 617 RFHHFTDGSCSCGDFW 632
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 317/522 (60%), Gaps = 2/522 (0%)
Query: 132 RRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRF 191
RR FE + R V +NT+I Y+ S + L + R+M + + + S + +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 192 LDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMI 251
+D++ G ++H V + G SD + ++++D+Y++ + +D+ +VF + RD ++WN ++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG 311
+ V+N R +AL LF Q + K +P V +L G+++H Y++ G
Sbjct: 316 AGYVQNGRYNEALRLFR--QMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 312 YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
+G I ++++L+ MYS+CG + A ++F VSW+A+I G A++G+G EA+ FE
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
EM+R G++P+ F VL+ACSH GLVDE +F+ M +G+ + HY + DLLGRA
Sbjct: 434 EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRA 493
Query: 432 GLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLL 491
G L++AY I+ M V+P ++W TLL +C +H ++ L E+V E++ + ++ G YVL+
Sbjct: 494 GKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMC 553
Query: 492 NIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLD 551
N+Y+S G W+++A++R M++K ++ P C IE+K H FV D SH +I E L
Sbjct: 554 NMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLK 613
Query: 552 DINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVR 611
+ +Q++ GYV + S LH VD++ K +L HSE+LA+AFG++ T PGTT+RV N+R
Sbjct: 614 AVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIR 673
Query: 612 VCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+C DCH +K S + R++I+RD+ RFHHF G CSC DYW
Sbjct: 674 ICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 121/300 (40%), Gaps = 40/300 (13%)
Query: 219 VMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
V+ +Y+ + +A +F + +AW +I C + AL+ F M++ S +C
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRA-SGRC- 102
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRC--------- 329
PD L FGE +H +I+ G + N+L+ MY++
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 330 ----------------------GCL-----DKAYEVFMGTPNKSVVSWSAMISGLAVNGY 362
C+ D VF P K VVS++ +I+G A +G
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYG 422
++A+ EM ++PD T + VL S V +G +I + GI +++
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK-GIDSDVYIGS 281
Query: 423 CMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ 482
+VD+ ++ ++ + V + + + D W +L+ +G R+ +++ K +
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCR-DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/538 (37%), Positives = 311/538 (57%), Gaps = 1/538 (0%)
Query: 116 LSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIA 175
L++ A SG Y+ F I+ P FNTMIR Y S ++ L Y +M +RG
Sbjct: 70 LAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNE 129
Query: 176 ANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKV 235
+ + +K+C R I G Q+H VFK G ++D + +++++Y +C + + + V
Sbjct: 130 PDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAV 189
Query: 236 FDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXN 295
F+++ + +W+ M+S + L LF M S +N + ++
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETN-LKAEESGMVSALLACANTG 248
Query: 296 SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMIS 355
+L G IH +++ I + SL+ MY +CGCLDKA +F ++ +++SAMIS
Sbjct: 249 ALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMIS 308
Query: 356 GLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGIT 415
GLA++G G+ A+ F +M + G+ PD + VL+ACSHSGLV EG F M+ E +
Sbjct: 309 GLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVE 368
Query: 416 PNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIER 475
P HYGC+VDLLGRAGLL++A E I ++ ++ + IWRT L CR+ ++ LG+ +
Sbjct: 369 PTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQE 428
Query: 476 LIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVV 535
L++L + GDY+L+ N+YS W+ VA RT + K ++ TPG +ELKG H FV
Sbjct: 429 LLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVS 488
Query: 536 DDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGV 595
D SH + EIY+ L + QLK GY +L+ L VD++EK L HS+K+AIAFG+
Sbjct: 489 QDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGL 548
Query: 596 LATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
L TPPG+ +++A N+R+C DCH + K S +Y R++++RD RFH F+GG CSC DYW
Sbjct: 549 LYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/554 (37%), Positives = 320/554 (57%), Gaps = 35/554 (6%)
Query: 133 RFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFL 192
+ F I V +N+MI + SP K L L++ M + A+ ++ + +C +
Sbjct: 187 KVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR 246
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLL-TAVMDLYSQCRKGDDACKVFD-------------- 237
++ G QV C+ ++ + +L L A++D+Y++C +DA ++FD
Sbjct: 247 NLEFGRQV-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 305
Query: 238 -----------------EMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPD 280
MPQ+D VAWN +IS +N + +AL +F +Q N + +
Sbjct: 306 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM-KLN 364
Query: 281 DVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFM 340
+T +LE G IH+YI + G +++++LI MYS+CG L+K+ EVF
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 341 GTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDE 400
+ V WSAMI GLA++G G EA++ F +MQ ++P+ TFT V ACSH+GLVDE
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 401 GMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGAC 460
S F +M +GI P HY C+VD+LGR+G L+KA + I M + P ++W LLGAC
Sbjct: 485 AESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 544
Query: 461 RIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
+IH ++ L E RL+EL+ + G +VLL NIY+ G WE V+E+R M+ ++ PG
Sbjct: 545 KIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPG 604
Query: 521 CCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKE-KG 579
C +IE+ G++HEF+ D +H ++Y L ++ ++LK GY E+S L ++++E K
Sbjct: 605 CSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKE 664
Query: 580 YVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRF 639
L+ HSEKLAI +G+++T +RV N+RVC DCH+ KL S +Y+R++I+RD RF
Sbjct: 665 QSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRF 724
Query: 640 HHFRGGQCSCSDYW 653
HHFR GQCSC+D+W
Sbjct: 725 HHFRNGQCSCNDFW 738
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 210/485 (43%), Gaps = 51/485 (10%)
Query: 64 NQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSG 123
NQPT + + + IS I+ L Q H H++ T DP + + ALS
Sbjct: 22 NQPTT-----NNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSS 76
Query: 124 PLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDM-RRRGIAANPLSSS 182
Y+R+ F++I +P +NT+IRAY+ P ++ + DM N +
Sbjct: 77 -FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFP 135
Query: 183 FAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR 242
F +K+ + G +H K SD + +++ Y C D ACKVF + ++
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 243 DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
D V+WN MI+ V+ AL LF M+S K VT +LEFG +
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVK--ASHVTMVGVLSACAKIRNLEFGRQ 253
Query: 303 IHNYIMERGYGGAINLSNSLIAMYSRCGCL------------------------------ 332
+ +YI E + L+N+++ MY++CG +
Sbjct: 254 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 313
Query: 333 -DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQ-RIGIRPDDQTFTGVLS 390
+ A EV P K +V+W+A+IS NG EA+ F E+Q + ++ + T LS
Sbjct: 314 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373
Query: 391 ACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDP 450
AC+ G ++ G + I + GI N H ++ + + G L+K+ EV ++ K D
Sbjct: 374 ACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDV 431
Query: 451 TIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG---DYVLLLNIYSSAGHWEKVAEVR 507
+W ++G +HG G ++ K QEA + V N++ + H V E
Sbjct: 432 FVWSAMIGGLAMHG---CGNEAVDMF--YKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 486
Query: 508 TLMKE 512
+L +
Sbjct: 487 SLFHQ 491
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/564 (35%), Positives = 328/564 (58%), Gaps = 7/564 (1%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
L++H HI+ DP ++ + + G + Y+R+ F++ + + +N + RA
Sbjct: 97 LRVHRHILDNGSDQDPFLATKLIGMYSDLGSVD---YARKVFDKTRKRTIYVWNALFRAL 153
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI----RFLDIVGGVQVHCNVFKDGH 209
+++ ++ L LY M R G+ ++ + ++ +K+C+ ++ G ++H ++ + G+
Sbjct: 154 TLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY 213
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDV 269
S ++T ++D+Y++ D A VF MP R+ V+W+ MI+C +N + +AL F
Sbjct: 214 SSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFRE 273
Query: 270 MQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRC 329
M + P+ VT +LE G+ IH YI+ RG + + ++L+ MY RC
Sbjct: 274 MMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRC 333
Query: 330 GCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVL 389
G L+ VF ++ VVSW+++IS V+GYGK+AI+ FEEM G P TF VL
Sbjct: 334 GKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVL 393
Query: 390 SACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPD 449
ACSH GLV+EG F+ M + GI P I HY CMVDLLGRA LD+A +++ M +P
Sbjct: 394 GACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPG 453
Query: 450 PTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTL 509
P +W +LLG+CRIHG+V L ER RL L+ + AG+YVLL +IY+ A W++V V+ L
Sbjct: 454 PKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKL 513
Query: 510 MKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSE 569
++ + +Q PG C +E++ ++ FV D + +I+ L + + +K GY+ +
Sbjct: 514 LEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGV 573
Query: 570 LHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNR 629
L++++ +EK ++ HSEKLA+AFG++ T G +R+ N+R+C DCH F K S +
Sbjct: 574 LYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEK 633
Query: 630 DVILRDHKRFHHFRGGQCSCSDYW 653
++++RD RFH F+ G CSC DYW
Sbjct: 634 EILVRDVNRFHRFKNGVCSCGDYW 657
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
N +I + + + A+ + S + P T +SL R+H +I
Sbjct: 50 NQLIQSLCKEGKLKQAIRVL------SQESSPSQQTYELLILCCGHRSSLSDALRVHRHI 103
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
++ G L+ LI MYS G +D A +VF T +++ W+A+ L + G+G+E +
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM---IGEFGITPNIHHYGCM 424
+ +M RIG+ D T+T VL AC S + + + G + +++ +
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTL 223
Query: 425 VDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEA 484
VD+ R G +D A V M V+ + W ++ +G R ++ +
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 485 GDYVLLLNIYSS 496
+ V ++++ +
Sbjct: 283 PNSVTMVSVLQA 294
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/591 (36%), Positives = 339/591 (57%), Gaps = 27/591 (4%)
Query: 76 HKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFF 135
+ E +I S SQ + Q+ +H + + L R A+S P D ++ + F
Sbjct: 5 YMETMIQKCVSFSQ---IKQLQSHFLTAGHFQSSFLRSRLLERCAIS-PFGDLSFAVQIF 60
Query: 136 EQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIA------ANPLSSSFAVKSCI 189
I +P+ + +N +IR ++ S P YR M ++ + + L+ SF +K+C
Sbjct: 61 RYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACA 120
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGD--DACKVFDEMPQRDTVAW 247
R L Q+HC + + G +DSLL T ++D YS + GD A K+FDEMP RD +W
Sbjct: 121 RALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYS--KNGDLISAYKLFDEMPVRDVASW 178
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERI-HNY 306
N +I+ V NR +A+ L+ M++ + +VT ++ GE I H Y
Sbjct: 179 NALIAGLVSGNRASEAMELYKRMETEGIR--RSEVTVVAALGACSHLGDVKEGENIFHGY 236
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVF-MGTPNKSVVSWSAMISGLAVNGYGKE 365
+ + +SN+ I MYS+CG +DKAY+VF T KSVV+W+ MI+G AV+G
Sbjct: 237 SNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHR 291
Query: 366 AIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMV 425
A+E F++++ GI+PDD ++ L+AC H+GLV+ G+S F+ M + G+ N+ HYGC+V
Sbjct: 292 ALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVV 350
Query: 426 DLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG 485
DLL RAG L +A+++I +M++ PDP +W++LLGA I+ V + E + E+ G
Sbjct: 351 DLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDG 410
Query: 486 DYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGE 545
D+VLL N+Y++ G W+ V VR M+ K ++ PG IE KG +HEF D SH++ E
Sbjct: 411 DFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWRE 470
Query: 546 IYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVL---ATPPGT 602
IYE +D+I +++ GYV + LH + ++EK L YHSEKLA+A+G++ +
Sbjct: 471 IYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEES 530
Query: 603 TLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+RV N+R+C DCH K S +Y R++I+RD RFH F+ G CSC D+W
Sbjct: 531 PVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/609 (35%), Positives = 330/609 (54%), Gaps = 38/609 (6%)
Query: 81 ISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPI----YSRRFFE 136
++ ++S S L IH ++ T L+ D V+ L+ P Y+ F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 137 QINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVG 196
QI P + FN +IR +S P K Y M + I + ++ F +K+ ++
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQC-----------RKG---------------- 229
G Q H + + G Q+D + +++ +Y+ C + G
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 230 ----DDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXX 285
++A ++FDEMP R+ W++MI+ +NN A+ LF+ M+ ++
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG--VVANETVMV 253
Query: 286 XXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK 345
+LEFGER + Y+++ + L +L+ M+ RCG ++KA VF G P
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
+SWS++I GLAV+G+ +A+ F +M +G P D TFT VLSACSH GLV++G+ +
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGH 465
+ M + GI P + HYGC+VD+LGRAG L +A I M VKP+ I LLGAC+I+ +
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 466 VTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE 525
+ ERV LI++K + +G YVLL NIY+ AG W+K+ +R +MKEK ++ PG IE
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Query: 526 LKGVVHEFVV-DDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSY 584
+ G +++F + DD H G+I ++I ++++ GY VD++EK +
Sbjct: 494 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHM 553
Query: 585 HSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRG 644
HSEKLAIA+G++ T PGTT+R+ N+RVC DCH KL S VY R++I+RD RFHHFR
Sbjct: 554 HSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRN 613
Query: 645 GQCSCSDYW 653
G CSC DYW
Sbjct: 614 GVCSCRDYW 622
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/584 (36%), Positives = 332/584 (56%), Gaps = 10/584 (1%)
Query: 74 PSHKEQVISTIKSVSQKP-HLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSR 132
P K+ + +++ S KP L +IHA ++ T ++ L + + G D Y+R
Sbjct: 7 PLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIG---DMCYAR 63
Query: 133 RFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFL 192
+ F+++++P + +NT+ + Y + P + L LY+ MR G+ + + F VK+ +
Sbjct: 64 QVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG 123
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
D G +H +V K G ++ T ++ +Y + + A +F+ M +D VAWN ++
Sbjct: 124 DFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA 183
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
CV+ + AL F+ M ++ + D T SLE GE I++ +
Sbjct: 184 VCVQTGNSAIALEYFNKM--CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEI 241
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
I + N+ + M+ +CG + A +F ++VVSWS MI G A+NG +EA+ F
Sbjct: 242 DCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTT 301
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI--GEFGITPNIHHYGCMVDLLGR 430
MQ G+RP+ TF GVLSACSH+GLV+EG +F M+ + + P HY CMVDLLGR
Sbjct: 302 MQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGR 361
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDY-VL 489
+GLL++AYE I M V+PD IW LLGAC +H + LG++V + L+E A + G Y VL
Sbjct: 362 SGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVE-TAPDIGSYHVL 420
Query: 490 LLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYET 549
L NIY++AG W+ V +VR+ M++ + ++E +G +H F D SH + IYE
Sbjct: 421 LSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEK 480
Query: 550 LDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATN 609
LD+I K+++ GYV + S H V+ +EK LS+HSEKLAIAFG++ PG +RV N
Sbjct: 481 LDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKN 540
Query: 610 VRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+R C DCH F K S + + ++I+RD RFHHFR G CSC ++W
Sbjct: 541 LRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/533 (38%), Positives = 308/533 (57%), Gaps = 11/533 (2%)
Query: 132 RRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRR-GIAANPLSSSFAVKSCIR 190
RR F+ + + +N MI YS ++ ++ L L+ M G+ AN + + V +C+R
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
+H V K G D + +MD+YS+ K D A ++F +M RD V WN M
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKC---------EPDDVTXXXXXXXXXXXNSLEFGE 301
I+ V + DAL L MQ+ K +P+ +T ++L G+
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 537
Query: 302 RIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNG 361
IH Y ++ + + ++L+ MY++CGCL + +VF P K+V++W+ +I ++G
Sbjct: 538 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 597
Query: 362 YGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHY 421
G+EAI+ M G++P++ TF V +ACSHSG+VDEG+ F M ++G+ P+ HY
Sbjct: 598 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 657
Query: 422 GCMVDLLGRAGLLDKAYEVITTMAVKPDPT-IWRTLLGACRIHGHVTLGERVIERLIELK 480
C+VDLLGRAG + +AY+++ M + W +LLGA RIH ++ +GE + LI+L+
Sbjct: 658 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 717
Query: 481 AQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSH 540
A YVLL NIYSSAG W+K EVR MKE+ ++ PGC IE VH+FV D SH
Sbjct: 718 PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSH 777
Query: 541 KRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPP 600
+ ++ L+ + ++++ GYV + S LH V++ EK +L HSEKLAIAFG+L T P
Sbjct: 778 PQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP 837
Query: 601 GTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
GT +RVA N+RVC DCH K S + +R++ILRD +RFH F+ G CSC DYW
Sbjct: 838 GTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 178/400 (44%), Gaps = 19/400 (4%)
Query: 119 VALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANP 178
VA+ G L S+ + +NT++ + ++ + L R+M G+ +
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 179 LSSSFAVKSCIRFLDIVGGVQVHCNVFKDGH-QSDSLLLTAVMDLYSQCRKGDDACKVFD 237
+ S + +C + G ++H K+G +S + +A++D+Y C++ +VFD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 238 EMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSL 297
M R WN MI+ +N ++AL LF M+ ++ + T +
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL-ANSTTMAGVVPACVRSGAF 421
Query: 298 EFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGL 357
E IH ++++RG + N+L+ MYSR G +D A +F ++ +V+W+ MI+G
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Query: 358 AVNGYGKEAIEAFEEMQ-----------RIGIRPDDQTFTGVLSACSHSGLVDEGMSFFD 406
+ + ++A+ +MQ R+ ++P+ T +L +C+ + +G
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541
Query: 407 RMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHV 466
I + ++ +VD+ + G L + +V + K + W ++ A +HG+
Sbjct: 542 YAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN- 598
Query: 467 TLGERVIERLIELKAQEAG-DYVLLLNIYSSAGHWEKVAE 505
G+ I+ L + Q + V ++++++ H V E
Sbjct: 599 --GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 122/257 (47%), Gaps = 7/257 (2%)
Query: 149 MIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDG 208
++R+ S+ ++ + Y DM GI + + +K+ D+ G Q+H +V+K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 209 HQSDSLLLT-AVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLF 267
+ DS+ + +++LY +C KVFD + +R+ V+WN +IS + AL F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 268 DVMQSTSNKCEPDDVTXXXXXXXXXXX---NSLEFGERIHNYIMERGYGGAINLSNSLIA 324
M EP T L G+++H Y + +G + + N+L+A
Sbjct: 188 RCM--LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVA 244
Query: 325 MYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQT 384
MY + G L + + + +V+W+ ++S L N EA+E EM G+ PD+ T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 385 FTGVLSACSHSGLVDEG 401
+ VL ACSH ++ G
Sbjct: 305 ISSVLPACSHLEMLRTG 321
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/547 (37%), Positives = 308/547 (56%), Gaps = 21/547 (3%)
Query: 123 GPLQDPIYSRRFFEQINRPIVSH----FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANP 178
G +D + R FE++ + ++ I Y+ + L + R M GI N
Sbjct: 309 GRFEDAV---RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 179 LSSSFAVKSCIRFLDIVGGVQVHC-------NVFKDGHQSDSLLLTAVMDLYSQCRKGDD 231
++ + C ++ G ++HC ++ K+GH +++++ ++D+Y++C+K D
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDT 425
Query: 232 ACKVFDEM--PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXX 289
A +FD + +RD V W VMI ++ AL L M + P+ T
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 290 XXXXXNSLEFGERIHNYIMERGYGGAINL--SNSLIAMYSRCGCLDKAYEVFMGTPNKSV 347
+L G++IH Y + R A+ L SN LI MY++CG + A VF K+
Sbjct: 486 ACASLAALRIGKQIHAYAL-RNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE 544
Query: 348 VSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDR 407
V+W+++++G ++GYG+EA+ F+EM+RIG + D T VL ACSHSG++D+GM +F+R
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 408 MIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVT 467
M FG++P HY C+VDLLGRAG L+ A +I M ++P P +W L CRIHG V
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 468 LGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE-L 526
LGE E++ EL + G Y LL N+Y++AG W+ V +R+LM+ K ++ PGC +E +
Sbjct: 665 LGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGI 724
Query: 527 KGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHS 586
KG F V D +H EIY+ L D +++K GYV E LH VDD+EK +L HS
Sbjct: 725 KGTT-TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHS 783
Query: 587 EKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQ 646
EKLA+A+G+L TP G +R+ N+RVC DCH S + + D+ILRD RFHHF+ G
Sbjct: 784 EKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGS 843
Query: 647 CSCSDYW 653
CSC YW
Sbjct: 844 CSCKGYW 850
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 214/500 (42%), Gaps = 55/500 (11%)
Query: 55 LAPIPHHKRNQPTPISSFPPS---------HKEQVISTIKSVSQKPHLLQIHAHIVCTTL 105
L P K +Q +S F S HK + IS +K + QK I TL
Sbjct: 6 LIPNAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGI------LTL 59
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYL 165
++ H +S G L + R F + V H+N++IR+Y + K LYL
Sbjct: 60 ----NLTSHLISTYISVGCLSHAVSLLRRFPPSDAG-VYHWNSLIRSYGDNGCANKCLYL 114
Query: 166 YRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQ 225
+ M + + F K+C + G H G S+ + A++ +YS+
Sbjct: 115 FGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174
Query: 226 CRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXX 285
CR DA KVFDEM D V+WN +I + + + AL +F M + C PD++T
Sbjct: 175 CRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM-TNEFGCRPDNITLV 233
Query: 286 XXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK 345
+ G+++H + + + + N L+ MY++CG +D+A VF K
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
VVSW+AM++G + G ++A+ FE+MQ I+ D T++ +S + GL E +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGH 465
+M+ GI PN ++ G L E I A+K + R +GH
Sbjct: 354 RQMLSS-GIKPNEVTLISVLSGCASVGALMHGKE-IHCYAIKYPIDL--------RKNGH 403
Query: 466 VTLGER--VIERLIEL-------------------KAQEAGDYVLLLNIYSSAGHWEKVA 504
G+ VI +LI++ K ++ + +++ YS G K
Sbjct: 404 ---GDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 505 EVRTLMKEKAIQTTPGCCTI 524
E+ + M E+ QT P TI
Sbjct: 461 ELLSEMFEEDCQTRPNAFTI 480
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/462 (41%), Positives = 287/462 (62%), Gaps = 3/462 (0%)
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
D+ G +H V + G S + +++ LY+ C A KVFD+MP++D VAWN +I+
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
N + +AL+L+ M S K PD T +L G+R+H Y+++ G
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIK--PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
++ SN L+ +Y+RCG +++A +F +K+ VSW+++I GLAVNG+GKEAIE F+
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 373 MQRI-GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
M+ G+ P + TF G+L ACSH G+V EG +F RM E+ I P I H+GCMVDLL RA
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 432 GLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLL 491
G + KAYE I +M ++P+ IWRTLLGAC +HG L E ++++L+ +GDYVLL
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 492 NIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLD 551
N+Y+S W V ++R M ++ PG +E+ VHEF++ D SH + IY L
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 360
Query: 552 DINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVR 611
++ +L+ GYV ++S+ V+++EK + YHSEK+AIAF +++TP + + V N+R
Sbjct: 361 EMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLR 420
Query: 612 VCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
VC DCH +KL S VYNR++++RD RFHHF+ G CSC DYW
Sbjct: 421 VCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 118/257 (45%), Gaps = 5/257 (1%)
Query: 127 DPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK 186
D + + F+++ + +N++I ++ + P++ L LY +M +GI + + +
Sbjct: 38 DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLS 97
Query: 187 SCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVA 246
+C + + G +VH + K G + ++DLY++C + ++A +FDEM +++V+
Sbjct: 98 ACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS 157
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFG-ERIHN 305
W +I N ++A+ LF M+ST P ++T ++ G E
Sbjct: 158 WTSLIVGLAVNGFGKEAIELFKYMESTEGLL-PCEITFVGILYACSHCGMVKEGFEYFRR 216
Query: 306 YIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK-SVVSWSAMISGLAVNGYGK 364
E I ++ + +R G + KAYE P + +VV W ++ V +G
Sbjct: 217 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV--HGD 274
Query: 365 EAIEAFEEMQRIGIRPD 381
+ F +Q + + P+
Sbjct: 275 SDLAEFARIQILQLEPN 291
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/578 (36%), Positives = 325/578 (56%), Gaps = 21/578 (3%)
Query: 91 PHLLQI---HAHIVCTTLVHDPAVSLHFLSRV-------ALSGPLQDPIYSRRFFEQI-- 138
PHLL+ +H+ VH L F + V AL + +R FE +
Sbjct: 123 PHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPL 182
Query: 139 -NRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAAN--PLSSSFAVKSCIRFLDIV 195
R IVS + ++ AY+ + P + L ++ MR+ + + L S +C++ D+
Sbjct: 183 PERTIVS-WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ--DLK 239
Query: 196 GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCV 255
G +H +V K G + + LL ++ +Y++C + A +FD+M + + WN MIS
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 256 RNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA 315
+N R+A+ +F M + PD ++ SLE ++ Y+ Y
Sbjct: 300 KNGYAREAIDMFHEM--INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
+ +S++LI M+++CG ++ A VF T ++ VV WSAMI G ++G +EAI + M+R
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
G+ P+D TF G+L AC+HSG+V EG FF+RM + I P HY C++DLLGRAG LD
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLD 476
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYS 495
+AYEVI M V+P T+W LL AC+ H HV LGE ++L + G YV L N+Y+
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 496 SAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINK 555
+A W++VAEVR MKEK + GC +E++G + F V D SH R EI ++ I
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIES 596
Query: 556 QLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVD 615
+LK G+V + LH ++D+E L HSE++AIA+G+++TP GT LR+ N+R CV+
Sbjct: 597 RLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVN 656
Query: 616 CHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
CH KL S + +R++++RD RFHHF+ G CSC DYW
Sbjct: 657 CHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 196/407 (48%), Gaps = 17/407 (4%)
Query: 82 STIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSR-VALSGPLQDPIYSRRFFEQINR 140
S I S + K L QIHA ++ L S +++ + S D ++R+ F+ + R
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGL----QFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P + +N +IR YS ++ Q L +Y +M+ ++ + + +K+C + G V
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFD--EMPQRDTVAWNVMISCCVRNN 258
H VF+ G +D + ++ LY++CR+ A VF+ +P+R V+W ++S +N
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 259 RTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINL 318
+AL +F M+ K PD V L+ G IH +++ G +L
Sbjct: 202 EPMEALEIFSQMRKMDVK--PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 319 SNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGI 378
SL MY++CG + A +F + +++ W+AMISG A NGY +EAI+ F EM +
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 379 RPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAY 438
RPD + T +SAC+ G +++ S ++ +G ++ ++D+ + G ++ A
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYE-YVGRSDYRDDVFISSALIDMFAKCGSVEGA- 377
Query: 439 EVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG 485
++ + D +W ++ +HG R E + +A E G
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHG------RAREAISLYRAMERG 418
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/568 (36%), Positives = 321/568 (56%), Gaps = 14/568 (2%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q H D VS + + G L+D +R+ F++I + + + +MIR Y
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED---ARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 155 MSDSPQKGLYLYRDM------RRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDG 208
++ + + L++D+ + + + + +C R +H V K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 209 HQSDSLLLTAVMDLYSQCRKGDDAC--KVFDEMPQRDTVAWNVMISCCVRNNRTRDALSL 266
+ ++D Y++ +G A K+FD++ +D V++N ++S ++ + +A +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 267 FDVMQSTSNKCEP-DDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAM 325
F + NK + +T +L G+ IH+ ++ G + + S+I M
Sbjct: 274 FRRL--VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 326 YSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTF 385
Y +CG ++ A + F NK+V SW+AMI+G ++G+ +A+E F M G+RP+ TF
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 386 TGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMA 445
VL+ACSH+GL EG +F+ M G FG+ P + HYGCMVDLLGRAG L KAY++I M
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 446 VKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAE 505
+KPD IW +LL ACRIH +V L E + RL EL + G Y+LL +IY+ AG W+ V
Sbjct: 452 MKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVER 511
Query: 506 VRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVE 565
VR +MK + + PG +EL G VH F++ D H ++ +IYE L ++N++L AGYV
Sbjct: 512 VRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Query: 566 LSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSG 625
SS H VD++EK L HSEKLAIAFG++ T PG+T+ V N+RVC DCHN +KL S
Sbjct: 572 TSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISK 631
Query: 626 VYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+ +R+ ++RD KRFHHF+ G CSC DYW
Sbjct: 632 IVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 183/377 (48%), Gaps = 19/377 (5%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSF--AVKSCIRF 191
F +++ V +N++I + S + L + MR+ ++ P SSF A+K+C
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRK--LSLYPTRSSFPCAIKACSSL 89
Query: 192 LDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMI 251
DI G Q H F G+QSD + +A++ +YS C K +DA KVFDE+P+R+ V+W MI
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLE------FGERIHN 305
N DA+SLF + N + DD ++ E IH+
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDEN--DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 306 YIMERGYGGAINLSNSLIAMYSRC--GCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYG 363
++++RG+ +++ N+L+ Y++ G + A ++F +K VS+++++S A +G
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 364 KEAIEAFEEMQRIGIRPDDQ-TFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYG 422
EA E F + + + + T + VL A SHSG + G D++I G+ ++
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI-RMGLEDDVIVGT 326
Query: 423 CMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ 482
++D+ + G ++ A + M K + W ++ +HGH + +I+ +
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR 385
Query: 483 EAGDYVLLLNIYSSAGH 499
+Y+ +++ ++ H
Sbjct: 386 P--NYITFVSVLAACSH 400
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/610 (34%), Positives = 330/610 (54%), Gaps = 36/610 (5%)
Query: 77 KEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFE 136
K I+ + S + QIHA + + D + HF+ VALS + Y+ + +
Sbjct: 6 KHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDH-KYLDYANQILD 64
Query: 137 QINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANP--LSSSFAVKSCIRFLDI 194
+ +P + N+MIRA+ S P+K YR + G P + +F V++C
Sbjct: 65 RSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMR 124
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQ----------------------------C 226
G+QVH + G +D + T ++ LY++ C
Sbjct: 125 ETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTAC 184
Query: 227 RKGDD---ACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVT 283
+ D A K+F+ MP+RD +AWN MIS + +R+AL++F +MQ K + V
Sbjct: 185 ARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV--NGVA 242
Query: 284 XXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTP 343
+L+ G H+YI + L+ +L+ +Y++CG ++KA EVF G
Sbjct: 243 MISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME 302
Query: 344 NKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMS 403
K+V +WS+ ++GLA+NG+G++ +E F M++ G+ P+ TF VL CS G VDEG
Sbjct: 303 EKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR 362
Query: 404 FFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIH 463
FD M EFGI P + HYGC+VDL RAG L+ A +I M +KP +W +LL A R++
Sbjct: 363 HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMY 422
Query: 464 GHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCT 523
++ LG ++++EL+ G YVLL NIY+ + W+ V+ VR MK K ++ PGC
Sbjct: 423 KNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSV 482
Query: 524 IELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLS 583
+E+ G VHEF V D SH + +I DI+++L++AGY + + + +D++EK L
Sbjct: 483 MEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALC 542
Query: 584 YHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFR 643
HSEK AIAFG+++ +R+ N+RVC DCH + S ++NR++I+RD RFHHF+
Sbjct: 543 LHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFK 602
Query: 644 GGQCSCSDYW 653
G CSC+ +W
Sbjct: 603 DGHCSCNGFW 612
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 324/559 (57%), Gaps = 9/559 (1%)
Query: 97 HAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIY--SRRFFEQINRPIVSHFNTMIRAYS 154
+++C L + + FL V ++ ++ + + + F+Q+ + V + TMI AYS
Sbjct: 79 EGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
QK L L M R + N + S ++SC D+ +HC + K+G +SD
Sbjct: 139 KCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVF 195
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ +A++D++++ + +DA VFDEM D + WN +I +N+R+ AL LF M+
Sbjct: 196 VRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG 255
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
E +T LE G + H +I++ Y + L+N+L+ MY +CG L+
Sbjct: 256 FIAEQATLTSVLRACTGLAL--LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLED 311
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
A VF + V++WS MISGLA NGY +EA++ FE M+ G +P+ T GVL ACSH
Sbjct: 312 ALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
+GL+++G +F M +GI P HYGCM+DLLG+AG LD A +++ M +PD WR
Sbjct: 372 AGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWR 431
Query: 455 TLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKA 514
TLLGACR+ ++ L E +++I L ++AG Y LL NIY+++ W+ V E+RT M+++
Sbjct: 432 TLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRG 491
Query: 515 IQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVD 574
I+ PGC IE+ +H F++ D SH + E+ + L+ + +L GYV E + L ++
Sbjct: 492 IKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLE 551
Query: 575 DKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILR 634
++ L +HSEKLA+AFG++ P +R+ N+R+C DCH F KL S + R +++R
Sbjct: 552 GEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIR 611
Query: 635 DHKRFHHFRGGQCSCSDYW 653
D R+HHF+ G+CSC DYW
Sbjct: 612 DPIRYHHFQDGKCSCGDYW 630
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 143/308 (46%), Gaps = 9/308 (2%)
Query: 169 MRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRK 228
++ G+ A+ + S +K CI + G + +++ +GH+ L+ ++++Y +
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 229 GDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXX 288
+DA ++FD+MPQR+ ++W MIS + + AL L +M + P+ T
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM--LRDNVRPNVYT---YS 166
Query: 289 XXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVV 348
N + +H I++ G + + ++LI ++++ G + A VF +
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 349 SWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM 408
W+++I G A N A+E F+ M+R G + T T VL AC+ L++ GM +
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 409 IGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTL 468
+ ++ +VD+ + G L+ A V M + D W T++ +G+
Sbjct: 287 V---KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMISGLAQNGYSQE 342
Query: 469 GERVIERL 476
++ ER+
Sbjct: 343 ALKLFERM 350
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 318/574 (55%), Gaps = 5/574 (0%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
V+ S + + +H+ +V HD A LS + SG L D + + F++I
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLND---AHKLFDEIP 173
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
V + + Y+ S ++ + L++ M G+ + + +C+ D+ G
Sbjct: 174 DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEW 233
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNR 259
+ + + Q +S + T +++LY++C K + A VFD M ++D V W+ MI N+
Sbjct: 234 IVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSF 293
Query: 260 TRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLS 319
++ + LF +Q +PD + +L+ GE + I + + ++
Sbjct: 294 PKEGIELF--LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 320 NSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR 379
N+LI MY++CG + + +EVF K +V +A ISGLA NG+ K + F + +++GI
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 380 PDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYE 439
PD TF G+L C H+GL+ +G+ FF+ + + + + HYGCMVDL GRAG+LD AY
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 440 VITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGH 499
+I M ++P+ +W LL CR+ L E V++ LI L+ AG+YV L NIYS G
Sbjct: 472 LICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGR 531
Query: 500 WEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKI 559
W++ AEVR +M +K ++ PG IEL+G VHEF+ DD SH +IY L+D+ ++++
Sbjct: 532 WDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
Query: 560 AGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNF 619
G+V V+++EK VL YHSEKLA+A G+++T G +RV N+RVC DCH
Sbjct: 592 MGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEV 651
Query: 620 LKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+KL S + R++++RD+ RFH F G CSC+DYW
Sbjct: 652 MKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 183/399 (45%), Gaps = 14/399 (3%)
Query: 74 PSHKEQVISTIKSVS-QKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSR 132
+ K Q I T+ SV+ HL QIH ++ L HD + L R + YS
Sbjct: 9 ATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLF---FRQTKYSY 65
Query: 133 RFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFL 192
F P + +N++I + + + L L+ +R+ G+ + + +K+C R
Sbjct: 66 LLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRAS 125
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
G+ +H V K G D +T+++ +YS + +DA K+FDE+P R V W + S
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
+ R R+A+ LF M K PD L+ GE I Y+ E
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVK--PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM 243
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+ +L+ +Y++CG ++KA VF K +V+WS MI G A N + KE IE F +
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVD---EGMSFFDRMIGEFGITPNIHHYGCMVDLLG 429
M + ++PD + G LS+C+ G +D G+S DR EF N+ ++D+
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH--EF--LTNLFMANALIDMYA 359
Query: 430 RAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTL 468
+ G + + +EV M K D I + +GHV L
Sbjct: 360 KCGAMARGFEVFKEMKEK-DIVIMNAAISGLAKNGHVKL 397
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/561 (36%), Positives = 319/561 (56%), Gaps = 9/561 (1%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSR--RFFEQINRPIVSHFNTMIRA 152
QIH+ I+ T + V + A G L D + RF + +VS + TMI
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKL-DTAWDILIRF---AGKDVVS-WTTMIAG 565
Query: 153 YSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSD 212
Y+ + K L +R M RGI ++ + + AV +C + G Q+H G SD
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 213 SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
A++ LYS+C K +++ F++ D +AWN ++S ++ +AL +F M
Sbjct: 626 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
+ ++ T +++ G+++H I + GY + N+LI+MY++CG +
Sbjct: 686 EG--IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSI 743
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
A + F+ K+ VSW+A+I+ + +G+G EA+++F++M +RP+ T GVLSAC
Sbjct: 744 SDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 803
Query: 393 SHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI 452
SH GLVD+G+++F+ M E+G++P HY C+VD+L RAGLL +A E I M +KPD +
Sbjct: 804 SHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV 863
Query: 453 WRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKE 512
WRTLL AC +H ++ +GE L+EL+ +++ YVLL N+Y+ + W+ R MKE
Sbjct: 864 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 513 KAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHK 572
K ++ PG IE+K +H F V D +H EI+E D+ K+ GYV + S L++
Sbjct: 924 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNE 983
Query: 573 VDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVI 632
+ ++K ++ HSEKLAI+FG+L+ P + V N+RVC DCH ++K S V NR++I
Sbjct: 984 LQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREII 1043
Query: 633 LRDHKRFHHFRGGQCSCSDYW 653
+RD RFHHF GG CSC DYW
Sbjct: 1044 VRDAYRFHHFEGGACSCKDYW 1064
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 180/411 (43%), Gaps = 13/411 (3%)
Query: 66 PTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPL 125
PTP + + I +++ + ++ H L + T V + VSL+F L
Sbjct: 286 PTPYAFSSVLSACKKIESLE-IGEQLHGLVLKLGFSSDTYVCNALVSLYF--------HL 336
Query: 126 QDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAV 185
+ I + F +++ +NT+I S +K + L++ M G+ + + + V
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 186 KSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTV 245
+C + G Q+H K G S++ + A+++LY++C + A F E + V
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 246 AWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHN 305
WNVM+ + R++ +F MQ + P+ T LE GE+IH+
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQI--EEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 306 YIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKE 365
I++ + + + LI MY++ G LD A+++ + K VVSW+ MI+G + +
Sbjct: 515 QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 574
Query: 366 AIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMV 425
A+ F +M GIR D+ T +SAC+ + EG + G + ++ +V
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALV 633
Query: 426 DLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERL 476
L R G ++++Y D W L+ + G+ RV R+
Sbjct: 634 TLYSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 166/370 (44%), Gaps = 17/370 (4%)
Query: 95 QIHAHIVC-----TTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTM 149
QIHA I+ +T+V +P + L+ SR +RR F+ + S + M
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLY--SRNGFVD------LARRVFDGLRLKDHSSWVAM 259
Query: 150 IRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGH 209
I S ++ + + L+ DM GI P + S + +C + + G Q+H V K G
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDV 269
SD+ + A++ LY A +F M QRD V +N +I+ + A+ LF
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 270 MQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRC 329
M + EPD T +L G+++H Y + G+ + +L+ +Y++C
Sbjct: 380 MH--LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 330 GCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVL 389
++ A + F+ T ++VV W+ M+ + + + F +MQ I P+ T+ +L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 390 SACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPD 449
C G ++ G ++I + N + ++D+ + G LD A++++ A K D
Sbjct: 498 KTCIRLGDLELGEQIHSQII-KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-D 555
Query: 450 PTIWRTLLGA 459
W T++
Sbjct: 556 VVSWTTMIAG 565
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 193/452 (42%), Gaps = 50/452 (11%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
++H+ I+ L + +S G L + F+++ + +N MI+ +
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF---KVFDEMPERTIFTWNKMIKELA 162
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC----IRFLDIVGGVQVHCNVFKDGHQ 210
+ + L+ M + N + S +++C + F D+V Q+H + G +
Sbjct: 163 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAF-DVVE--QIHARILYQGLR 219
Query: 211 SDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM 270
+++ ++DLYS+ D A +VFD + +D +W MIS +N +A+ LF M
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG 330
P SLE GE++H +++ G+ + N+L+++Y G
Sbjct: 280 YVLG--IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 337
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLS 390
L A +F + V+++ +I+GL+ GYG++A+E F+ M G+ PD T ++
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 391 ACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA------------------- 431
ACS G + G + G N G +++L +
Sbjct: 398 ACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 432 ---------GLLD---KAYEVITTMAVK---PDPTIWRTLLGACRIHGHVTLGERVIERL 476
GLLD ++ + M ++ P+ + ++L C G + LGE++ ++
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 477 IELKAQEAGDYV--LLLNIYSSAGHWEKVAEV 506
I+ Q YV +L+++Y+ G + ++
Sbjct: 517 IKTNFQ-LNAYVCSVLIDMYAKLGKLDTAWDI 547
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 143/312 (45%), Gaps = 17/312 (5%)
Query: 169 MRRRGIAANPLSSSFAVKSCIRF---LDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQ 225
+ RGI N + + ++ C++ LD G ++H + K G S+ L + D Y
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFY-- 130
Query: 226 CRKGD--DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVT 283
KGD A KVFDEMP+R WN MI N + LF ++ S P++ T
Sbjct: 131 LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLF--VRMVSENVTPNEGT 188
Query: 284 XXXXXXXXXXXN-SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGT 342
+ + + E+IH I+ +G + + N LI +YSR G +D A VF G
Sbjct: 189 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 343 PNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGM 402
K SW AMISGL+ N EAI F +M +GI P F+ VLSAC ++ G
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 403 SFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRI 462
++ + G + + + +V L G L A + + M+ + D + TL+
Sbjct: 309 QLHG-LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQ 366
Query: 463 HGHVTLGERVIE 474
G+ GE+ +E
Sbjct: 367 CGY---GEKAME 375
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 317/548 (57%), Gaps = 25/548 (4%)
Query: 129 IYSRRFFEQINRPIVSHFNTMIRAYSMS-----------DSPQKGLYLYRDM------RR 171
+ +R+FF+ +N V +NT+I Y+ S +SP + ++ + M R
Sbjct: 236 VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR 295
Query: 172 RGIAANPLSSSFAVKSCIRFLDIVGG------VQVHCNVFKDGHQSDSLLLTAVMDLYSQ 225
A L ++ + + ++ G +++ +F + ++ Y+Q
Sbjct: 296 MVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQ 355
Query: 226 CRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXX 285
C K +A +FD+MP+RD V+W MI+ ++ + +AL LF M+ + +
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 286 XXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK 345
+LE G+++H +++ GY + N+L+ MY +CG +++A ++F K
Sbjct: 416 LSTCADVV--ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
+VSW+ MI+G + +G+G+ A+ FE M+R G++PDD T VLSACSH+GLVD+G +F
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGH 465
M ++G+ PN HY CMVDLLGRAGLL+ A+ ++ M +PD IW TLLGA R+HG+
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 466 VTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE 525
L E +++ ++ + +G YVLL N+Y+S+G W V ++R M++K ++ PG IE
Sbjct: 594 TELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653
Query: 526 LKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYH 585
++ H F V D H K EI+ L++++ ++K AGYV + S LH V+++EK ++ YH
Sbjct: 654 IQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYH 713
Query: 586 SEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGG 645
SE+LA+A+G++ G +RV N+RVC DCHN +K + + R +ILRD+ RFHHF+ G
Sbjct: 714 SERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDG 773
Query: 646 QCSCSDYW 653
CSC DYW
Sbjct: 774 SCSCGDYW 781
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 162/368 (44%), Gaps = 35/368 (9%)
Query: 115 FLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGI 174
LS A +G + D +R F+++ +N ++ AY + ++ L++ +
Sbjct: 163 MLSGYAQNGCVDD---ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 175 AA-NPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDAC 233
+ N L F K IV Q F + D + ++ Y+Q K D+A
Sbjct: 220 VSWNCLLGGFVKKK-----KIVEARQF----FDSMNVRDVVSWNTIITGYAQSGKIDEAR 270
Query: 234 KVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXX 293
++FDE P +D W M+S ++N +A LFD M E ++V+
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP------ERNEVSWNAMLAGYVQ 324
Query: 294 XNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAM 353
+E + + + + R ++ N++I Y++CG + +A +F P + VSW+AM
Sbjct: 325 GERMEMAKELFDVMPCRN----VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 380
Query: 354 ISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFG 413
I+G + +G+ EA+ F +M+R G R + +F+ LS C+ ++ G R++
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV---- 436
Query: 414 ITPNIHHYGCMVD-----LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTL 468
+ GC V + + G +++A ++ MA K D W T++ HG +
Sbjct: 437 --KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEV 493
Query: 469 GERVIERL 476
R E +
Sbjct: 494 ALRFFESM 501
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 144/351 (41%), Gaps = 53/351 (15%)
Query: 143 VSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHC 202
+ +N I +Y + + L +++ M P SS + I G ++
Sbjct: 64 IKEWNVAISSYMRTGRCNEALRVFKRM--------PRWSSVSYNGMISGYLRNGEFELAR 115
Query: 203 NVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRD 262
+F + + D + ++ Y + R A ++F+ MP+RD +WN M+S +N D
Sbjct: 116 KLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDD 175
Query: 263 ALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLE-----FGERIHNYIM--------- 308
A S+FD M E +DV+ + +E F R N+ +
Sbjct: 176 ARSVFDRMP------EKNDVSWNALLSAYVQNSKMEEACMLFKSR-ENWALVSWNCLLGG 228
Query: 309 ---------ERGYGGAINLS-----NSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMI 354
R + ++N+ N++I Y++ G +D+A ++F +P + V +W+AM+
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 355 SGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGI 414
SG N +EA E F++M ++ ++ +L+ ++ FD M
Sbjct: 289 SGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVM-----P 339
Query: 415 TPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGH 465
N+ + M+ + G + +A + M K DP W ++ GH
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGH 389
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 62/283 (21%)
Query: 201 HCN----VFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR 256
CN VFK + S+ ++ Y + + + A K+FDEMP+RD V+WNVMI VR
Sbjct: 79 RCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVR 138
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
N A LF++M DV
Sbjct: 139 NRNLGKARELFEIMPER-------DVCSW------------------------------- 160
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
N++++ Y++ GC+D A VF P K+ VSW+A++S N +EA F+ +
Sbjct: 161 ---NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENW 217
Query: 377 GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDK 436
+ ++ +L + E FFD M ++ + ++ ++G +D+
Sbjct: 218 AL----VSWNCLLGGFVKKKKIVEARQFFDSM-----NVRDVVSWNTIITGYAQSGKIDE 268
Query: 437 AYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
A ++ V+ D W + + G++ R++E EL
Sbjct: 269 ARQLFDESPVQ-DVFTWTAM-----VSGYIQ--NRMVEEAREL 303
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/562 (36%), Positives = 311/562 (55%), Gaps = 12/562 (2%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
+QIH+ T V F+S + G ++ F + +P + +N MI Y
Sbjct: 241 MQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK---MGSALFREFRKPDIVAYNAMIHGY 297
Query: 154 SMSDSPQKGLYLYRDMRRRG--IAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQS 211
+ + + L L++++ G + ++ L S V + + + G + N H S
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFL--SHAS 355
Query: 212 DSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQ 271
S LT V YS+ + + A K+FDE P++ +WN MIS +N T DA+SLF MQ
Sbjct: 356 VSTALTTV---YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
+ + P+ VT +L G+ +H+ + + +I +S +LI MY++CG
Sbjct: 413 KS--EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 332 LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
+ +A +F K+ V+W+ MISG ++G G+EA+ F EM GI P TF VL A
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
CSH+GLV EG F+ MI +G P++ HY CMVD+LGRAG L +A + I M+++P +
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSS 590
Query: 452 IWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
+W TLLGACRIH L V E+L EL G +VLL NI+S+ ++ + A VR K
Sbjct: 591 VWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAK 650
Query: 512 EKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELH 571
++ + PG IE+ H F D SH + EIYE L+ + +++ AGY E LH
Sbjct: 651 KRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALH 710
Query: 572 KVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDV 631
V+++E+ ++ HSE+LAIAFG++AT PGT +R+ N+RVC+DCH KL S + R +
Sbjct: 711 DVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVI 770
Query: 632 ILRDHKRFHHFRGGQCSCSDYW 653
++RD RFHHF+ G CSC DYW
Sbjct: 771 VVRDANRFHHFKDGVCSCGDYW 792
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 201/468 (42%), Gaps = 43/468 (9%)
Query: 77 KEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFE 136
K + K + HL Q HA I+ +D ++ R++ G + Y+R F
Sbjct: 20 KNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIY---YARDIFL 76
Query: 137 QINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRR-GIAANPLSSSFAVKSCIRFLDIV 195
+ RP V FN ++R +S+++SP L ++ +R+ + N + +FA+ + F D
Sbjct: 77 SVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDR 136
Query: 196 GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCV 255
G +H DG S+ LL + ++ +Y + + +DA KVFD MP++DT+ WN MIS
Sbjct: 137 AGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYR 196
Query: 256 RNNRTRDALSLF-DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
+N +++ +F D++ + + D T L G +IH+ + G
Sbjct: 197 KNEMYVESIQVFRDLINESCTRL--DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254
Query: 315 AINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQ 374
+ I++YS+CG + +F +V+++AMI G NG + ++ F+E+
Sbjct: 255 HDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Query: 375 RIGIRPDDQTFTGVLSACSHSGL------------------VDEGMSFFDRMIGE----- 411
G R T ++ H L V ++ + E
Sbjct: 315 LSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 412 --FGITP--NIHHYGCMVDLLGRAGLLDKAYEVITTMA---VKPDPTIWRTLLGACRIHG 464
F +P ++ + M+ + GL + A + M P+P +L AC G
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 465 HVTLGERVIERLIELKAQEAGDYV--LLLNIYSSAGHWEKVAEVRTLM 510
++LG + + L+ E+ YV L+ +Y+ G +AE R L
Sbjct: 435 ALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCG---SIAEARRLF 478
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/576 (35%), Positives = 322/576 (55%), Gaps = 9/576 (1%)
Query: 71 SFPPSHKEQVISTIKSVSQKPHLLQ---IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQD 127
S+ P+ + + +K + L+Q +HAHI+ + HD + L+ A G L++
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 128 PIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKS 187
+R+ FE++ + + T+I YS D P L + M R G + N + S +K+
Sbjct: 114 ---ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 188 CIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAW 247
G Q+H K G S+ + +A++DLY++ DDA VFD + R+ V+W
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
N +I+ R + T AL LF M + P + LE G+ +H Y+
Sbjct: 231 NALIAGHARRSGTEKALELFQGM--LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
++ G N+L+ MY++ G + A ++F + VVSW+++++ A +G+GKEA+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDL 427
FEEM+R+GIRP++ +F VL+ACSHSGL+DEG +++ M + GI P HY +VDL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDL 407
Query: 428 LGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDY 487
LGRAG L++A I M ++P IW+ LL ACR+H + LG E + EL + G +
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
Query: 488 VLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIY 547
V+L NIY+S G W A VR MKE ++ P C +E++ +H FV +D H ++ EI
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527
Query: 548 ETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVA 607
+++ ++K GYV + S + VD +E+ L YHSEK+A+AF +L TPPG+T+ +
Sbjct: 528 RKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIK 587
Query: 608 TNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFR 643
N+RVC DCH +KL S V R++I+RD RFHHF+
Sbjct: 588 KNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFK 623
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/554 (35%), Positives = 313/554 (56%), Gaps = 32/554 (5%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
++R F++ + N M Y ++ L ++ M G+ + +S A+ SC +
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM----------- 239
+I+ G H V ++G +S + A++D+Y +C + D A ++FD M
Sbjct: 350 LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 409
Query: 240 --------------------PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEP 279
P+++ V+WN +IS V+ + +A+ +F MQS
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG-VNA 468
Query: 280 DDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVF 339
D VT +L+ + I+ YI + G + L +L+ M+SRCG + A +F
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 340 MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVD 399
N+ V +W+A I +A+ G + AIE F++M G++PD F G L+ACSH GLV
Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQ 588
Query: 400 EGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
+G F M+ G++P HYGCMVDLLGRAGLL++A ++I M ++P+ IW +LL A
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Query: 460 CRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTP 519
CR+ G+V + E++ L + G YVLL N+Y+SAG W +A+VR MKEK ++ P
Sbjct: 649 CRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPP 708
Query: 520 GCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKG 579
G +I+++G HEF D SH I LD+++++ G+V +LS+ L VD+KEK
Sbjct: 709 GTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKI 768
Query: 580 YVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRF 639
++LS HSEKLA+A+G++++ GTT+R+ N+RVC DCH+F K S VYNR++ILRD+ RF
Sbjct: 769 FMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRF 828
Query: 640 HHFRGGQCSCSDYW 653
H+ R G+CSC D+W
Sbjct: 829 HYIRQGKCSCGDFW 842
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 196/458 (42%), Gaps = 52/458 (11%)
Query: 82 STIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINR- 140
S++K+ L H + L +D + ++R G + +++ FE
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
+N++IR Y+ S + + L+ M GI+ + + F + +C + G+Q+
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRT 260
H + K G+ D + +++ Y++C + D A KVFDEM +R+ V+W MI R +
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 261 RDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN 320
+DA+ LF M + P+ VT LE GE+++ +I G + +
Sbjct: 217 KDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 321 SLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRP 380
+L+ MY +C +D A +F ++ +AM S G +EA+ F M G+RP
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 381 DDQTFTGVLSACSH--------------------------SGLVDEGMS---------FF 405
D + +S+CS + L+D M F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI--WRTLLGACRIH 463
DRM + +T N G + + G +D A+E TM P+ I W T++ +
Sbjct: 396 DRMSNKTVVTWNSIVAGYVEN-----GEVDAAWETFETM---PEKNIVSWNTIISGL-VQ 446
Query: 464 GHVTLGERVIERLIELKAQEA--GDYVLLLNIYSSAGH 499
G +L E IE +++QE D V +++I S+ GH
Sbjct: 447 G--SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/556 (36%), Positives = 315/556 (56%), Gaps = 12/556 (2%)
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYS--------RRFFEQINRPIVSHFNTMIRAYSMSD 157
+H A+ F S V +S L D +Y+ R+ F+ + V +N+MI AY ++
Sbjct: 258 IHGYAMRSGFDSLVNISTALVD-MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 158 SPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLT 217
+P++ + +++ M G+ +S A+ +C D+ G +H + G + ++
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 218 AVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKC 277
+++ +Y +C++ D A +F ++ R V+WN MI +N R DAL+ F M+S + K
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK- 435
Query: 278 EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYE 337
PD T + + IH +M + ++ +L+ MY++CG + A
Sbjct: 436 -PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 338 VFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGL 397
+F + V +W+AMI G +G+GK A+E FEEMQ+ I+P+ TF V+SACSHSGL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 398 VDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
V+ G+ F M + I ++ HYG MVDLLGRAG L++A++ I M VKP ++ +L
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Query: 458 GACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
GAC+IH +V E+ ERL EL + G +VLL NIY +A WEKV +VR M + ++
Sbjct: 615 GACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRK 674
Query: 518 TPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKE 577
TPGC +E+K VH F +H +IY L+ + +K AGYV + + L V++
Sbjct: 675 TPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDV 733
Query: 578 KGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHK 637
K +LS HSEKLAI+FG+L T GTT+ V N+RVC DCHN K S V R++++RD +
Sbjct: 734 KEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQ 793
Query: 638 RFHHFRGGQCSCSDYW 653
RFHHF+ G CSC DYW
Sbjct: 794 RFHHFKNGACSCGDYW 809
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 155/305 (50%), Gaps = 3/305 (0%)
Query: 133 RFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFL 192
R FE I+ + ++TM++ ++ K L + MR + + ++ +K C
Sbjct: 90 RVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEA 149
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
++ G ++H + K G D +T + ++Y++CR+ ++A KVFD MP+RD V+WN +++
Sbjct: 150 ELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVA 209
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
+N R AL + M +P +T + G+ IH Y M G+
Sbjct: 210 GYSQNGMARMALEMVKSM--CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF 267
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+N+S +L+ MY++CG L+ A ++F G ++VVSW++MI N KEA+ F++
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQK 327
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M G++P D + G L AC+ G ++ G F ++ E G+ N+ ++ + +
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCK 386
Query: 433 LLDKA 437
+D A
Sbjct: 387 EVDTA 391
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 8/258 (3%)
Query: 204 VFKDGHQSDSLLLTAVMDLYSQCRKG--DDACKVFDEMPQRDTVAWNVMISCCVRNNRTR 261
VFK+G + T ++ L+ CR G D+A +VF+ + + V ++ M+ + +
Sbjct: 60 VFKNGLYQEHFFQTKLVSLF--CRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLD 117
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
AL F M+ + EP L G+ IH +++ G+ +
Sbjct: 118 KALQFFVRMR--YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG 175
Query: 322 LIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPD 381
L MY++C +++A +VF P + +VSW+ +++G + NG + A+E + M ++P
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 382 DQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVI 441
T VL A S L+ G + G ++ +VD+ + G L+ A ++
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 442 TTMAVKPDPTIWRTLLGA 459
M ++ + W +++ A
Sbjct: 295 DGM-LERNVVSWNSMIDA 311
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/561 (36%), Positives = 321/561 (57%), Gaps = 7/561 (1%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
++HAH++ T + + L L+D +R+ +++ V + MI YS
Sbjct: 73 RVHAHMIKTRYLPATYLRTRLLIFYGKCDCLED---ARKVLDEMPEKNVVSWTAMISRYS 129
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ + L ++ +M R N + + + SCIR + G Q+H + K + S
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF 189
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ ++++D+Y++ + +A ++F+ +P+RD V+ +I+ + +AL +F + S
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
P+ VT L+ G++ H +++ R L NSLI MYS+CG L
Sbjct: 250 --MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 307
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQ-RIGIRPDDQTFTGVLSACS 393
A +F P ++ +SW+AM+ G + +G G+E +E F M+ ++PD T VLS CS
Sbjct: 308 ARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Query: 394 HSGLVDEGMSFFDRMI-GEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI 452
H + D G++ FD M+ GE+G P HYGC+VD+LGRAG +D+A+E I M KP +
Sbjct: 368 HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV 427
Query: 453 WRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKE 512
+LLGACR+H V +GE V RLIE++ + AG+YV+L N+Y+SAG W V VR +M +
Sbjct: 428 LGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQ 487
Query: 513 KAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHK 572
KA+ PG I+ + +H F +D +H R+ E+ + +I+ ++K AGYV +LS L+
Sbjct: 488 KAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYD 547
Query: 573 VDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVI 632
VD+++K +L HSEKLA+ FG++AT G +RV N+R+CVDCHNF K+FS V+ R+V
Sbjct: 548 VDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVS 607
Query: 633 LRDHKRFHHFRGGQCSCSDYW 653
LRD RFH G CSC DYW
Sbjct: 608 LRDKNRFHQIVDGICSCGDYW 628
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 157/323 (48%), Gaps = 21/323 (6%)
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
+ +C+ + G +VH ++ K + + L T ++ Y +C +DA KV DEMP+++
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
V+W MIS + + +AL++F M + K P++ T + L G++IH
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGK--PNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 305 NYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGK 364
I++ Y I + +SL+ MY++ G + +A E+F P + VVS +A+I+G A G +
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 365 EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMS----FFDRMIGEFGITPNIHH 420
EA+E F + G+ P+ T+ +L+A S L+D G R + + + N
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--- 293
Query: 421 YGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI--WRTLLGACRIHGHVTLGERVIE--RL 476
++D+ + G L A + M P+ T W +L HG LG V+E RL
Sbjct: 294 --SLIDMYSKCGNLSYARRLFDNM---PERTAISWNAMLVGYSKHG---LGREVLELFRL 345
Query: 477 IELKAQEAGDYVLLLNIYSSAGH 499
+ + + D V LL + S H
Sbjct: 346 MRDEKRVKPDAVTLLAVLSGCSH 368
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 332/620 (53%), Gaps = 47/620 (7%)
Query: 71 SFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIY 130
SF P ++ + VS +++H + DP V F+ A G + Y
Sbjct: 113 SFLP-----ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRIN---Y 164
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+R F++++ V +NTMI Y + L+ +M+ + + + V +C R
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAV---------MDL------------------- 222
++ ++ + ++ + D+ LLTA+ MD+
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 284
Query: 223 ---YSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEP 279
YS+C + DDA +FD+ ++D V W MIS V ++ ++AL +F+ M + K P
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK--P 342
Query: 280 DDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVF 339
D V+ L+ + +H+ I G ++++N+LI MY++CG LD +VF
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 340 MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVD 399
P ++VVSWS+MI+ L+++G +A+ F M++ + P++ TF GVL CSHSGLV+
Sbjct: 403 EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Query: 400 EGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
EG F M E+ ITP + HYGCMVDL GRA LL +A EVI +M V + IW +L+ A
Sbjct: 463 EGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Query: 460 CRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTP 519
CRIHG + LG+ +R++EL+ G VL+ NIY+ WE V +R +M+EK +
Sbjct: 523 CRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEK 582
Query: 520 GCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKG 579
G I+ G HEF++ D HK+ EIY LD++ +LK+AGYV + S L V+++EK
Sbjct: 583 GLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKK 642
Query: 580 YVLSYHSEKLAIAFGVLATPPGT------TLRVATNVRVCVDCHNFLKLFSGVYNRDVIL 633
++ +HSEKLA+ FG++ +R+ N+RVC DCH F KL S VY R++I+
Sbjct: 643 DLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIV 702
Query: 634 RDHKRFHHFRGGQCSCSDYW 653
RD RFH ++ G CSC DYW
Sbjct: 703 RDRTRFHCYKNGLCSCRDYW 722
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 200/443 (45%), Gaps = 42/443 (9%)
Query: 66 PTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPL 125
P PI+S + + +S KS++ H+ Q+HAHI+ T + H FL +++S
Sbjct: 4 PPPIASTAANTILEKLSFCKSLN---HIKQLHAHILRTVINHKLN---SFLFNLSVSSSS 57
Query: 126 QDPIYSRRFFEQINRPIVS-HFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFA 184
+ Y+ F I P S FN +R S S P+ + Y+ +R G + S
Sbjct: 58 INLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPI 117
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
+K+ + + G+++H FK D + T MD+Y+ C + + A VFDEM RD
Sbjct: 118 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 177
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
V WN MI R +A LF+ M+ ++ PD++ ++ + I+
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSN--VMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 305 NYIMERG--------------YGGA-----------------INLSNSLIAMYSRCGCLD 333
+++E Y GA + +S ++++ YS+CG LD
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 295
Query: 334 KAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
A +F T K +V W+ MIS + Y +EA+ FEEM GI+PD + V+SAC+
Sbjct: 296 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 355
Query: 394 HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIW 453
+ G++D+ + I G+ + ++++ + G LD +V M + + W
Sbjct: 356 NLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSW 413
Query: 454 RTLLGACRIHGHVTLGERVIERL 476
+++ A +HG + + R+
Sbjct: 414 SSMINALSMHGEASDALSLFARM 436
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/477 (41%), Positives = 284/477 (59%), Gaps = 7/477 (1%)
Query: 183 FAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR 242
F S + G ++ VF D D +V++ Y++ DDA K+FDEMP+R
Sbjct: 98 FVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER 157
Query: 243 DTVAWNVMISCCVRNNRTRDALSLFDVMQ---STSNKCEPDDVTXXXXXXXXXXXNSLEF 299
+ ++W+ +I+ V + ++AL LF MQ P++ T +LE
Sbjct: 158 NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQ 217
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVF--MGTPNKSVVSWSAMISGL 357
G+ +H YI + I L +LI MY++CG L++A VF +G+ K V ++SAMI L
Sbjct: 218 GKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS-KKDVKAYSAMICCL 276
Query: 358 AVNGYGKEAIEAFEEMQRI-GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITP 416
A+ G E + F EM I P+ TF G+L AC H GL++EG S+F MI EFGITP
Sbjct: 277 AMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITP 336
Query: 417 NIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERL 476
+I HYGCMVDL GR+GL+ +A I +M ++PD IW +LL R+ G + E ++RL
Sbjct: 337 SIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
Query: 477 IELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVD 536
IEL +G YVLL N+Y+ G W +V +R M+ K I PGC +E++GVVHEFVV
Sbjct: 397 IELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVG 456
Query: 537 DVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVL 596
D S + IY LD+I ++L+ AGYV + L +++K+K LSYHSEKLAIAF ++
Sbjct: 457 DESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLM 516
Query: 597 ATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
T PGT +R+ N+R+C DCH +K+ S +++R++++RD RFHHFR G CSC D+W
Sbjct: 517 KTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/593 (34%), Positives = 325/593 (54%), Gaps = 15/593 (2%)
Query: 62 KRNQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVAL 121
K ++ T +++ P E + P L ++H + + V++ V+ F++ A
Sbjct: 392 KADEVTILNAVPVCFHESFL---------PSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 122 SGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSS 181
G L Y++R F I V+ +N +I ++ S+ P+ L + M+ G+ + +
Sbjct: 443 CGSLS---YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 182 SFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQ 241
+ +C + + G +VH + ++ + D + +V+ LY C + +FD M
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 242 RDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGE 301
+ V+WN +I+ ++N AL +F Q + ++ SL G
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFR--QMVLYGIQLCGISMMPVFGACSLLPSLRLGR 617
Query: 302 RIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNG 361
H Y ++ ++ SLI MY++ G + ++ +VF G KS SW+AMI G ++G
Sbjct: 618 EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677
Query: 362 YGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHY 421
KEAI+ FEEMQR G PDD TF GVL+AC+HSGL+ EG+ + D+M FG+ PN+ HY
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 737
Query: 422 GCMVDLLGRAGLLDKAYEVIT-TMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK 480
C++D+LGRAG LDKA V+ M+ + D IW++LL +CRIH ++ +GE+V +L EL+
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE 797
Query: 481 AQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSH 540
++ +YVLL N+Y+ G WE V +VR M E +++ GC IEL V FVV +
Sbjct: 798 PEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFL 857
Query: 541 KRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPP 600
EI + ++ GY + S H + ++EK L HSEKLA+ +G++ T
Sbjct: 858 DGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSE 917
Query: 601 GTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
GTT+RV N+R+CVDCHN KL S V R++++RD+KRFHHF+ G CSC DYW
Sbjct: 918 GTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 133/301 (44%), Gaps = 8/301 (2%)
Query: 103 TTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKG 162
T L +D + ++ A+ G D SR F+ + + +N +I +YS ++ +
Sbjct: 114 TRLRNDDVLCTRIITMYAMCGSPDD---SRFVFDALRSKNLFQWNAVISSYSRNELYDEV 170
Query: 163 LYLYRDM-RRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMD 221
L + +M + + + +K+C D+ G+ VH V K G D + A++
Sbjct: 171 LETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVS 230
Query: 222 LYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM--QSTSNKCEP 279
Y DA ++FD MP+R+ V+WN MI N + ++ L M ++ P
Sbjct: 231 FYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP 290
Query: 280 DDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVF 339
D T + G+ +H + ++ + L+N+L+ MYS+CGC+ A +F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 340 MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG--IRPDDQTFTGVLSACSHSGL 397
NK+VVSW+ M+ G + G + +M G ++ D+ T + C H
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 398 V 398
+
Sbjct: 411 L 411
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 143/318 (44%), Gaps = 7/318 (2%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
VI +S L +H +V T LV D V +S G + D + + F+ +
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL---QLFDIMP 249
Query: 140 RPIVSHFNTMIRAYSMSD-SPQKGLYLYRDMRRRGIAA---NPLSSSFAVKSCIRFLDIV 195
+ +N+MIR +S + S + L L M G A + + + C R +I
Sbjct: 250 ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309
Query: 196 GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCV 255
G VH K + +L A+MD+YS+C +A +F ++ V+WN M+
Sbjct: 310 LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 369
Query: 256 RNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA 315
T + M + + D+VT + L + +H Y +++ +
Sbjct: 370 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
++N+ +A Y++CG L A VF G +K+V SW+A+I G A + + +++A +M+
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 376 IGIRPDDQTFTGVLSACS 393
G+ PD T +LSACS
Sbjct: 490 SGLLPDSFTVCSLLSACS 507
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/553 (35%), Positives = 312/553 (56%), Gaps = 32/553 (5%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
++R F++ + N M Y ++ L ++ M G+ + +S A+ SC +
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM----------- 239
+I+ G H V ++G +S + A++D+Y +C + D A ++FD M
Sbjct: 350 LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 409
Query: 240 --------------------PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEP 279
P+++ V+WN +IS V+ + +A+ +F MQS
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG-VNA 468
Query: 280 DDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVF 339
D VT +L+ + I+ YI + G + L +L+ M+SRCG + A +F
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 340 MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVD 399
N+ V +W+A I +A+ G + AIE F++M G++PD F G L+ACSH GLV
Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQ 588
Query: 400 EGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
+G F M+ G++P HYGCMVDLLGRAGLL++A ++I M ++P+ IW +LL A
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Query: 460 CRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTP 519
CR+ G+V + E++ L + G YVLL N+Y+SAG W +A+VR MKEK ++ P
Sbjct: 649 CRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPP 708
Query: 520 GCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKG 579
G +I+++G HEF D SH I LD+++++ G+V +LS+ L VD+KEK
Sbjct: 709 GTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKI 768
Query: 580 YVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRF 639
++LS HSEKLA+A+G++++ GTT+R+ N+RVC DCH+F K S VYNR++ILRD+ RF
Sbjct: 769 FMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRF 828
Query: 640 HHFRGGQCSCSDY 652
H+ R G+CSC D+
Sbjct: 829 HYIRQGKCSCGDF 841
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 196/458 (42%), Gaps = 52/458 (11%)
Query: 82 STIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINR- 140
S++K+ L H + L +D + ++R G + +++ FE
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
+N++IR Y+ S + + L+ M GI+ + + F + +C + G+Q+
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRT 260
H + K G+ D + +++ Y++C + D A KVFDEM +R+ V+W MI R +
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 261 RDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN 320
+DA+ LF M + P+ VT LE GE+++ +I G + +
Sbjct: 217 KDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 321 SLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRP 380
+L+ MY +C +D A +F ++ +AM S G +EA+ F M G+RP
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 381 DDQTFTGVLSACSH--------------------------SGLVDEGMS---------FF 405
D + +S+CS + L+D M F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI--WRTLLGACRIH 463
DRM + +T N G + + G +D A+E TM P+ I W T++ +
Sbjct: 396 DRMSNKTVVTWNSIVAGYVEN-----GEVDAAWETFETM---PEKNIVSWNTIISGL-VQ 446
Query: 464 GHVTLGERVIERLIELKAQEA--GDYVLLLNIYSSAGH 499
G +L E IE +++QE D V +++I S+ GH
Sbjct: 447 G--SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 324/563 (57%), Gaps = 14/563 (2%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN--RPIVSHFNTMIRA 152
Q+H +V + D + + + + D + R F++I +VS + MI
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL---RLFKEIGCVGNVVS-WTAMISG 371
Query: 153 YSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSD 212
+ +D ++ + L+ +M+R+G+ N + S + + L ++ +VH V K ++
Sbjct: 372 FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERS 427
Query: 213 SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
S + TA++D Y + K ++A KVF + +D VAW+ M++ + T A+ +F +
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-- 485
Query: 273 TSNKCEPDDVTXXXXXXXXXXXN-SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
T +P++ T N S+ G++ H + ++ ++ +S++L+ MY++ G
Sbjct: 486 TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGN 545
Query: 332 LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
++ A EVF K +VSW++MISG A +G +A++ F+EM++ ++ D TF GV +A
Sbjct: 546 IESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 605
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
C+H+GLV+EG +FD M+ + I P H CMVDL RAG L+KA +VI M T
Sbjct: 606 CTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGST 665
Query: 452 IWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
IWRT+L ACR+H LG E++I +K +++ YVLL N+Y+ +G W++ A+VR LM
Sbjct: 666 IWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMN 725
Query: 512 EKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELH 571
E+ ++ PG IE+K + F+ D SH K +IY L+D++ +LK GY + S L
Sbjct: 726 ERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQ 785
Query: 572 KVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDV 631
+DD+ K VL+ HSE+LAIAFG++ATP G+ L + N+RVC DCH +KL + + R++
Sbjct: 786 DIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREI 845
Query: 632 ILRDHKRFHHFRG-GQCSCSDYW 653
++RD RFHHF G CSC D+W
Sbjct: 846 VVRDSNRFHHFSSDGVCSCGDFW 868
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 193/418 (46%), Gaps = 23/418 (5%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
LQ+H +V L VS ++ G ++ +R F++ V +N+MI Y
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK---ARILFDKTEVKSVVTWNSMISGY 270
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDS 213
+ + + L ++ MR + + S + +K C ++ Q+HC+V K G D
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMP-QRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
+ TA+M YS+C DA ++F E+ + V+W MIS ++N+ +A+ LF M+
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
P++ T + E +H +++ Y + + +L+ Y + G +
Sbjct: 391 KG--VRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
++A +VF G +K +V+WSAM++G A G + AI+ F E+ + GI+P++ TF+ +L+ C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 393 SHSGL-VDEGMSFFDRMIGEFGITPNIHHYGC----MVDLLGRAGLLDKAYEVITTMAVK 447
+ + + +G F F I + C ++ + + G ++ A EV K
Sbjct: 505 AATNASMGQGKQFHG-----FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 448 PDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAE 505
D W +++ HG V + + + K + G V + ++++ H V E
Sbjct: 560 -DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG--VTFIGVFAACTHAGLVEE 614
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 178/403 (44%), Gaps = 41/403 (10%)
Query: 148 TMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKD 207
+++ +S Q+ L+ ++ R G+ + S +K D + G Q+HC K
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKF 122
Query: 208 GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLF 267
G D + T+++D Y + D KVFDEM +R+ V W +IS RN+ + L+LF
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 268 DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYS 327
MQ+ +P+ T G ++H +++ G I +SNSLI +Y
Sbjct: 183 MRMQNEGT--QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 328 RCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTG 387
+CG + KA +F T KSVV+W++MISG A NG EA+ F M+ +R + +F
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 388 VLSACS-----------HSGLVDEGMSFFD---------------------RMIGEFGIT 415
V+ C+ H +V G FD R+ E G
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGF-LFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 416 PNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERV 472
N+ + M+ + ++A ++ + M V+P+ + +L A + + +V
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV 419
Query: 473 IERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAI 515
++ E ++ G LL+ Y G E+ A+V + + +K I
Sbjct: 420 VKTNYE-RSSTVG--TALLDAYVKLGKVEEAAKVFSGIDDKDI 459
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/611 (34%), Positives = 325/611 (53%), Gaps = 42/611 (6%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFE--Q 137
+IS + + QIH H++ L + + + G DP Y+RR E Q
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDP-YARRVIEPVQ 110
Query: 138 INRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGG 197
P + + +IR Y++ + + +Y MR+ I + S +K+C D+ G
Sbjct: 111 FRNPFL--WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLG 168
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT------------- 244
Q H F+ + ++D+Y +C D A KVFDEMP+RD
Sbjct: 169 RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 245 ------------------VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXX 286
VAW M++ +N + ++AL FD M+ + + D+VT
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA--DEVTVAG 286
Query: 287 XXXXXXXXNSLEFGERIHNYIMERGYGGA--INLSNSLIAMYSRCGCLDKAYEVFMGTPN 344
+ ++ +R + GY + + + ++LI MYS+CG +++A VFM N
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 345 KSVVSWSAMISGLAVNGYGKEAIEAFEEM-QRIGIRPDDQTFTGVLSACSHSGLVDEGMS 403
K+V ++S+MI GLA +G +EA+ F M + I+P+ TF G L ACSHSGLVD+G
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 404 FFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIH 463
FD M FG+ P HY CMVDLLGR G L +A E+I TM+V+P +W LLGACRIH
Sbjct: 407 VFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
Query: 464 GHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCC- 522
+ + E E L EL+ G+Y+LL N+Y+SAG W V VR L+KEK ++ TP
Sbjct: 467 NNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526
Query: 523 TIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVL 582
++ G +H+F +++H +I + L+++ ++L + GY +LSS + V D K +L
Sbjct: 527 VVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLIL 586
Query: 583 SYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHF 642
H+EKLA+AF +L T +T+ + N+R+C+DCH F++L S V + +I+RD+ RFHHF
Sbjct: 587 IQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHF 646
Query: 643 RGGQCSCSDYW 653
R G CSC D+W
Sbjct: 647 RSGDCSCGDFW 657
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/520 (37%), Positives = 294/520 (56%), Gaps = 2/520 (0%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
F E +R +VS + +MI Y+ + + L+ +M GI+ + + + + C R+
Sbjct: 354 FREMSDRSVVS-YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
+ G +VH + ++ D + A+MD+Y++C +A VF EM +D ++WN +I
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+N +ALSLF+++ + PD+ T ++ + G IH YIM GY
Sbjct: 473 YSKNCYANEALSLFNLLLE-EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF 531
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
+++NSL+ MY++CG L A+ +F +K +VSW+ MI+G ++G+GKEAI F +M
Sbjct: 532 SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL 433
++ GI D+ +F +L ACSHSGLVDEG FF+ M E I P + HY C+VD+L R G
Sbjct: 592 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGD 651
Query: 434 LDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNI 493
L KAY I M + PD TIW LL CRIH V L E+V E++ EL+ + G YVL+ NI
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANI 711
Query: 494 YSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDI 553
Y+ A WE+V +R + ++ ++ PGC IE+KG V+ FV D S+ I L +
Sbjct: 712 YAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Query: 554 NKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVC 613
++ GY L ++ EK L HSEKLA+A G++++ G +RV N+RVC
Sbjct: 772 RARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVC 831
Query: 614 VDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
DCH K S + R+++LRD RFH F+ G CSC +W
Sbjct: 832 GDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 160/327 (48%), Gaps = 4/327 (1%)
Query: 133 RFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFL 192
R F+++ +N ++ + S + L++ M G+ + + S KS
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
+ GG Q+H + K G + + +++ Y + ++ D A KVFDEM +RD ++WN +I+
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
V N LS+F +Q + E D T + G +H+ ++ +
Sbjct: 270 GYVSNGLAEKGLSVF--VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
N+L+ MYS+CG LD A VF ++SVVS+++MI+G A G EA++ FEE
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M+ GI PD T T VL+ C+ L+DEG + I E + +I ++D+ + G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCG 446
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLLGA 459
+ +A V + M VK D W T++G
Sbjct: 447 SMQEAELVFSEMRVK-DIISWNTIIGG 472
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 138/307 (44%), Gaps = 13/307 (4%)
Query: 143 VSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHC 202
V+ NT +R + S + + + L + I L S ++ C + G +V
Sbjct: 61 VTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCS--VLQLCADSKSLKDGKEVDN 118
Query: 203 NVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRD 262
+ +G DS L + + +Y+ C +A +VFDE+ + WN++++ ++
Sbjct: 119 FIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSG 178
Query: 263 ALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSL 322
++ LF M S+ E D T S+ GE++H +I++ G+G ++ NSL
Sbjct: 179 SIGLFKKMMSSG--VEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 323 IAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDD 382
+A Y + +D A +VF + V+SW+++I+G NG ++ + F +M GI D
Sbjct: 237 VAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDL 296
Query: 383 QTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHY----GCMVDLLGRAGLLDKAY 438
T V + C+ S L+ G R + G+ ++D+ + G LD A
Sbjct: 297 ATIVSVFAGCADSRLISLG-----RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 439 EVITTMA 445
V M+
Sbjct: 352 AVFREMS 358
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/544 (36%), Positives = 296/544 (54%), Gaps = 43/544 (7%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+N MI Y Q+ L + R M GI + + +++C + G QVH V
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 206 K----DGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN------------- 248
+ H +SL+ LY +C K D+A +F++MP +D V+WN
Sbjct: 314 RREDFSFHFDNSLV-----SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 249 ------------------VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX 290
+MIS N + L LF M+ EP D
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG--FEPCDYAFSGAIKS 426
Query: 291 XXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
+ G++ H +++ G+ +++ N+LI MY++CG +++A +VF P VSW
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 351 SAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG 410
+A+I+ L +G+G EA++ +EEM + GIRPD T VL+ACSH+GLVD+G +FD M
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 411 EFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGE 470
+ I P HY ++DLL R+G A VI ++ KP IW LL CR+HG++ LG
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 471 RVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVV 530
++L L + G Y+LL N++++ G WE+VA VR LM+++ ++ C IE++ V
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666
Query: 531 HEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVD-DKEKGYVLSYHSEKL 589
H F+VDD SH +Y L D+ K+++ GYV + S LH V+ D K +L+ HSEK+
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKI 726
Query: 590 AIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSC 649
A+AFG++ PPGTT+R+ N+R C DCHNF + S V RD+ILRD KRFHHFR G+CSC
Sbjct: 727 AVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSC 786
Query: 650 SDYW 653
++W
Sbjct: 787 GNFW 790
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 198/486 (40%), Gaps = 90/486 (18%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGG-----VQV 200
+N MI +S ++ + L+ M+ G + +F S + L +V VQ
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPD----NFTFASVLAGLALVADDEKQCVQF 171
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKG----DDACKVFDEMPQRDTVAWNVMISCCVR 256
H K G + + A++ +YS+C A KVFDE+ ++D +W M++ V+
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 257 N------------------------------NRTRDALSLFDVMQSTSNKCEPDDVTXXX 286
N NR +L V + S+ E D+ T
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 287 XXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS 346
L+ G+++H Y++ R + + NSL+++Y +CG D+A +F P K
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 347 VVSWSA-------------------------------MISGLAVNGYGKEAIEAFEEMQR 375
+VSW+A MISGLA NG+G+E ++ F M+R
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
G P D F+G + +C+ G G + +++ + G ++ ++ + + G+++
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL-KIGFDSSLSAGNALITMYAKCGVVE 469
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYS 495
+A +V TM D W L+ A HGH V E + LK D + LL + +
Sbjct: 470 EARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEM--LKKGIRPDRITLLTVLT 526
Query: 496 SAGHWEKVAEVRTLMK--EKAIQTTPG----CCTIEL-----KGVVHEFVVDDVSHKRKG 544
+ H V + R E + PG I+L K E V++ + K
Sbjct: 527 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 586
Query: 545 EIYETL 550
EI+E L
Sbjct: 587 EIWEAL 592
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 148/355 (41%), Gaps = 51/355 (14%)
Query: 203 NVFKDGHQSDSLLLTAVMDLYSQCRKGDD--ACKVFDEMP--QRDTVAWNVMISCCVRNN 258
+F + + D + T ++ Y C GD A VF++ P RDTV +N MI+ NN
Sbjct: 70 QLFDEISEPDKIARTTMVSGY--CASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 259 RTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFG-ERIHNYIMERGYGGAIN 317
A++LF M+ K PD+ T E + H ++ G G +
Sbjct: 128 DGYSAINLFCKMKHEGFK--PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS 185
Query: 318 LSNSLIAMYSRC-----------------------------------GCLDKAYEVFMGT 342
+SN+L+++YS+C G D E+ G
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 343 -PNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEG 401
N +V+++AMISG G+ +EA+E M GI D+ T+ V+ AC+ +GL+ G
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 402 MSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACR 461
++ + H +V L + G D+A + M K D W LL
Sbjct: 306 KQVHAYVLRREDFS--FHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYV 362
Query: 462 IHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQ 516
GH+ + + + E+K + ++++++ + G E+ ++ + MK + +
Sbjct: 363 SSGHIGEAKLIFK---EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 11/260 (4%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
++ F+++ + + MI + + ++GL L+ M+R G + S A+KSC
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
G Q H + K G S A++ +Y++C ++A +VF MP D+V+WN +
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
I+ ++ +A+ +++ M + PD +T ++ G + + ME
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIR--PDRITLLTVLTACSHAGLVDQGRKYFDS-MET 546
Query: 311 GYG---GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVS-WSAMISGLAVNGYGKEA 366
Y GA + + LI + R G A V P K W A++SG V+G +
Sbjct: 547 VYRIPPGADHYAR-LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 367 IEAFEEMQRIGIRPD-DQTF 385
I A +++ G+ P+ D T+
Sbjct: 606 IIAADKL--FGLIPEHDGTY 623
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 321/561 (57%), Gaps = 5/561 (0%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
+ IH++ + L + VS + A G L+D ++ F+++ + +N++I+AY
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD---CQKVFDRMYVRDLISWNSIIKAY 323
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDG-HQSD 212
+++ P + + L+++MR I + L+ + DI V + G D
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 213 SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
+ AV+ +Y++ D A VF+ +P D ++WN +IS +N +A+ ++++M+
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
+ + T +L G ++H +++ G + + SL MY +CG L
Sbjct: 444 -EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
+ A +F P + V W+ +I+ +G+G++A+ F+EM G++PD TF +LSAC
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 393 SHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI 452
SHSGLVDEG F+ M ++GITP++ HYGCMVD+ GRAG L+ A + I +M+++PD +I
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 453 WRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKE 512
W LL ACR+HG+V LG+ E L E++ + G +VLL N+Y+SAG WE V E+R++
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHG 682
Query: 513 KAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHK 572
K ++ TPG ++E+ V F + +H E+Y L + +LK+ GYV + L
Sbjct: 683 KGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQD 742
Query: 573 VDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVI 632
V+D EK ++L HSE+LAIAF ++ATP TT+R+ N+RVC DCH+ K S + R++I
Sbjct: 743 VEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREII 802
Query: 633 LRDHKRFHHFRGGQCSCSDYW 653
+RD RFHHF+ G CSC DYW
Sbjct: 803 VRDSNRFHHFKNGVCSCGDYW 823
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 178/407 (43%), Gaps = 18/407 (4%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+HA +V + + + +S V L L + +R F+ I V +N MI Y
Sbjct: 73 LHARLVVSKQIQNVCISAKL---VNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGR 129
Query: 156 SDSPQKGLYLYR-DMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ + + + + M G+ + + +K+C +D G ++HC K G D
Sbjct: 130 AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVY 186
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ +++ LYS+ + +A +FDEMP RD +WN MIS ++ ++AL+L + +++
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM- 245
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
D VT G IH+Y ++ G + +SN LI +Y+ G L
Sbjct: 246 -----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD 300
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
+VF + ++SW+++I +N AI F+EM+ I+PD T + S S
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
G + S + + +I +V + + GL+D A V + D W
Sbjct: 361 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWN 419
Query: 455 TLLGACRIHGHVTLG---ERVIERLIELKAQEAGDYVLLLNIYSSAG 498
T++ +G + ++E E+ A + G +V +L S AG
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQ-GTWVSVLPACSQAG 465
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/642 (33%), Positives = 331/642 (51%), Gaps = 76/642 (11%)
Query: 81 ISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPI-YSRRFFEQIN 139
+S + S L QIH + + D + + A+S + D + Y+RR
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAIS--ISDALPYARRLLLCFP 66
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRG-IAANPLSSSFAVKSCIRFLDIVGGV 198
P FNT++R YS SD P + ++ +M R+G + + S +F +K+ F + G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLY----------------------------SQCRKGD 230
Q+HC K G +S + T ++ +Y + C +G+
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 231 D----------------------------------ACKVFDEMPQRDTVAWNVMISCCVR 256
D A ++F EMP RD V+W+ MI
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH 246
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
N ++ F +Q P++V+ S EFG+ +H ++ + GY +
Sbjct: 247 NGSFNESFLYFRELQRAG--MSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKS-VVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
+++N+LI MYSRCG + A VF G K +VSW++MI+GLA++G G+EA+ F EM
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
G+ PD +F +L ACSH+GL++EG +F M + I P I HYGCMVDL GR+G L
Sbjct: 365 YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ 424
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYS 495
KAY+ I M + P +WRTLLGAC HG++ L E+V +RL EL +GD VLL N Y+
Sbjct: 425 KAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYA 484
Query: 496 SAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKG---EIYETLDD 552
+AG W+ VA +R M + I+ T +E+ +++F + K+KG E +E L +
Sbjct: 485 TAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGE---KKKGIDIEAHEKLKE 541
Query: 553 INKQLK-IAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVR 611
I +LK AGY E++S L+ V+++EK +S HSEKLA+AF + G +R+ N+R
Sbjct: 542 IILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLR 601
Query: 612 VCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+C DCH +KL S VY ++++RD RFH F+ G CSC DYW
Sbjct: 602 ICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/578 (35%), Positives = 312/578 (53%), Gaps = 17/578 (2%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
++ + S+S Q+H H+ +P V +S G + D +R+ FE+
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVAD---ARKVFEE-- 113
Query: 140 RPIVSH----FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIV 195
P S +N +I Y+ + Y++R M+ G++ + ++ V C +
Sbjct: 114 NPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLW 173
Query: 196 GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCV 255
G +H K G S+ +L + + +Y +C + ++FDEMP + + WN +IS
Sbjct: 174 LGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYS 233
Query: 256 RNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA 315
+N D L L++ M+S S C PD T + + G + + G+
Sbjct: 234 QNGLAYDVLELYEQMKS-SGVC-PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN 291
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
+ +SN+ I+MY+RCG L KA VF P KS+VSW+AMI ++G G+ + F++M +
Sbjct: 292 VFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK 351
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
GIRPD F VLSACSHSGL D+G+ F M E+ + P HY C+VDLLGRAG LD
Sbjct: 352 RGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLD 411
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYS 495
+A E I +M V+PD +W LLGAC+IH +V + E ++IE + G YVL+ NIYS
Sbjct: 412 EAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYS 471
Query: 496 SAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINK 555
+ + E + +R +M+E+A + PG +E KG VH F+ D SH++ E++ LD++
Sbjct: 472 DSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELET 531
Query: 556 QLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVD 615
V+EL+ + +E HSE+LAIAFG+L + PGT + V N+RVC D
Sbjct: 532 S------VMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCED 585
Query: 616 CHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
CH FLK S + +R ++RD RFH+F+ G CSC DYW
Sbjct: 586 CHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 191/389 (49%), Gaps = 10/389 (2%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+N +R + + + LYR M R G + + S F +KSC V G Q+HC+V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRD--TVAWNVMISCCVRNNRTRDA 263
K G +++ +LTA++ +Y +C DA KVF+E PQ +V +N +IS N++ DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLI 323
+F M+ T D VT L G +H ++ G + + NS I
Sbjct: 141 AYMFRRMKETG--VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 324 AMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQ 383
MY +CG ++ +F P K +++W+A+ISG + NG + +E +E+M+ G+ PD
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 384 TFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITT 443
T VLS+C+H G G +++ G PN+ + + R G L KA V
Sbjct: 259 TLVSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 444 MAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGD-YVLLLNIYSSAGHWEK 502
M VK + W ++G +HG +G + + +I+ + G +V++L+ S +G +K
Sbjct: 318 MPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDK 376
Query: 503 VAEV-RTLMKEKAIQTTPG--CCTIELKG 528
E+ R + +E ++ P C ++L G
Sbjct: 377 GLELFRAMKREYKLEPGPEHYSCLVDLLG 405
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 309/524 (58%), Gaps = 4/524 (0%)
Query: 131 SRRFFE-QINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
+R+ F+ + R +VS +NTMI Y+ + + L ++ +MR G + + S + +C
Sbjct: 115 ARQVFDGMLERSLVS-WNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG 173
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
D + ++HC K + + TA++DLY++C DA +VF+ M + +V W+
Sbjct: 174 VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME 309
M++ V+N +AL L+ Q S E + T +L G+++H I +
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMS--LEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 310 RGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEA 369
G+G + +++S + MY++CG L ++Y +F K++ W+ +ISG A + KE +
Sbjct: 292 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 370 FEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLG 429
FE+MQ+ G+ P++ TF+ +LS C H+GLV+EG FF M +G++PN+ HY CMVD+LG
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILG 411
Query: 430 RAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVL 489
RAGLL +AYE+I ++ P +IW +LL +CR++ ++ L E E+L EL+ + AG++VL
Sbjct: 412 RAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVL 471
Query: 490 LLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYET 549
L NIY++ WE++A+ R L+++ ++ G I++K VH F V + H R EI T
Sbjct: 472 LSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICST 531
Query: 550 LDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATN 609
LD++ + + GY + ELH V+ +K +L HSEKLA+ FG++ P + +R+ N
Sbjct: 532 LDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKN 591
Query: 610 VRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+R+CVDCH F+K S R +I+RD RFHHF G CSC D+W
Sbjct: 592 LRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 156/336 (46%), Gaps = 14/336 (4%)
Query: 188 CIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAW 247
C R ++ H + + + D LL +++ YS+C + A +VFD M +R V+W
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 130
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
N MI RN +AL +F M++ K ++ ++LE +++H
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTIS-SVLSACGVNCDALE-CKKLHCLS 188
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
++ + + +L+ +Y++CG + A +VF +KS V+WS+M++G N +EA+
Sbjct: 189 VKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEAL 248
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDL 427
+ QR+ + + T + V+ ACS+ + EG +I + G N+ VD+
Sbjct: 249 LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKSGFGSNVFVASSAVDM 307
Query: 428 LGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG-- 485
+ G L ++Y +I + + + +W T++ H + + L E K Q+ G
Sbjct: 308 YAKCGSLRESY-IIFSEVQEKNLELWNTIISGFAKHAR----PKEVMILFE-KMQQDGMH 361
Query: 486 -DYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
+ V ++ S GH V E R K ++TT G
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFF--KLMRTTYG 395
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/566 (34%), Positives = 315/566 (55%), Gaps = 12/566 (2%)
Query: 95 QIHAHIVCTTLVHDPAVSL-HFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
Q+H+ + + LV D SL ++ + G + D R+ F+++ V + +I Y
Sbjct: 290 QLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDD---CRKVFDRMEDHSVMSWTALITGY 346
Query: 154 SMS-DSPQKGLYLYRDMRRRG-IAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQS 211
+ + + + L+ +M +G + N + S A K+C D G QV FK G S
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 212 DSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQ 271
+S + +V+ ++ + + +DA + F+ + +++ V++N + RN A L +
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLS--E 464
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
T + T S+ GE+IH+ +++ G + N+LI+MYS+CG
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524
Query: 332 LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
+D A VF N++V+SW++MI+G A +G+ +E F +M G++P++ T+ +LSA
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
CSH GLV EG F+ M + I P + HY CMVDLL RAGLL A+E I TM + D
Sbjct: 585 CSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVL 644
Query: 452 IWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
+WRT LGACR+H + LG+ +++EL E Y+ L NIY+ AG WE+ E+R MK
Sbjct: 645 VWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMK 704
Query: 512 EKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELH 571
E+ + GC IE+ +H+F V D +H +IY+ LD + ++K GYV + LH
Sbjct: 705 ERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLH 764
Query: 572 KVDDKEKGY----VLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVY 627
K++++ +L HSEK+A+AFG+++T +RV N+RVC DCHN +K S V
Sbjct: 765 KLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVS 824
Query: 628 NRDVILRDHKRFHHFRGGQCSCSDYW 653
R+++LRD RFHHF+ G+CSC+DYW
Sbjct: 825 GREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 8/232 (3%)
Query: 169 MRRRGIA-ANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCR 227
M R GI + ++ S +KSCIR D G VH + + + DS+L +++ LYS+
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 228 KGDDACKVFDEM---PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTX 284
A VF+ M +RD V+W+ M++C N R DA+ +F ++ P+D
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVF--VEFLELGLVPNDYCY 169
Query: 285 XXXXXXXXXXNSLEFGERIHNYIMERG-YGGAINLSNSLIAMYSRC-GCLDKAYEVFMGT 342
+ + G ++M+ G + + + SLI M+ + + AY+VF
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 343 PNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
+VV+W+ MI+ G+ +EAI F +M G D T + V SAC+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 261 RDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN 320
R A+S D+M + D VT G+ +H ++E L N
Sbjct: 43 RGAVSALDLMARDGIR-PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 321 SLIAMYSRCGCLDKAYEVFMGT---PNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
SLI++YS+ G KA +VF + VVSWSAM++ NG +AI+ F E +G
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHY------GC-MVDLLGR 430
+ P+D +T V+ ACS+S V G G H+ GC ++D+ +
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRV-------TLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 431 A-GLLDKAYEVITTMAVKPDPTIWRTLLGACRIHG 464
+ AY+V M+ + + W ++ C G
Sbjct: 215 GENSFENAYKVFDKMS-ELNVVTWTLMITRCMQMG 248
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/576 (33%), Positives = 313/576 (54%), Gaps = 10/576 (1%)
Query: 82 STIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRP 141
+ +++ + L Q+HAH++ T ++ + L+ + Y+ F + P
Sbjct: 14 AIVRAGPRVKQLQQVHAHLIVTGYGRSRSL---LTKLITLACSARAIAYTHLLFLSVPLP 70
Query: 142 IVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVH 201
FN++I++ S P + YR M ++ + + + +KSC + G VH
Sbjct: 71 DDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVH 130
Query: 202 CNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTR 261
C+ G D+ + A++ YS+C + A +VFD MP++ VAWN ++S +N
Sbjct: 131 CHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLAD 190
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
+A+ +F M+ + EPD T ++ G +H YI+ G + L +
Sbjct: 191 EAIQVFYQMRESG--FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTA 248
Query: 322 LIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR-IGIRP 380
LI +YSRCG + KA EVF +V +W+AMIS +GYG++A+E F +M+ G P
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIP 308
Query: 381 DDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEV 440
++ TF VLSAC+H+GLV+EG S + RM + + P + H+ CMVD+LGRAG LD+AY+
Sbjct: 309 NNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKF 368
Query: 441 ITTMAVKPD---PTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSA 497
I + P +W +LGAC++H + LG + +RLI L+ G +V+L NIY+ +
Sbjct: 369 IHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS 428
Query: 498 GHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQL 557
G ++V+ +R M ++ G IE++ + F + D SH+ GEIY L+ + +
Sbjct: 429 GKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRC 488
Query: 558 KIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCH 617
K GY +H+V+++EK + L YHSEKLA+AFG+L T + + N+R+C DCH
Sbjct: 489 KEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCH 547
Query: 618 NFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+ K S V NR + +RD RFHHF+ G CSC DYW
Sbjct: 548 SAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/562 (33%), Positives = 312/562 (55%), Gaps = 10/562 (1%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+HA V T D +V L + + + +R F+++ +N +I +YS
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRV---LETRMLFDEMPELDFVSYNVVISSYS 327
Query: 155 MSDSPQKGLYLYRDMRRRGIAAN--PLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSD 212
+D + L+ +R+M+ G P ++ ++ + + L + G Q+HC S
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM--GRQLHCQALLATADSI 385
Query: 213 SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
+ +++D+Y++C ++A +F +PQR TV+W +IS V+ L LF M+
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
++ + D T SL G+++H +I+ G + + L+ MY++CG +
Sbjct: 446 SNLRA--DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
A +VF P+++ VSW+A+IS A NG G+ AI AF +M G++PD + GVL+AC
Sbjct: 504 KDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC 563
Query: 393 SHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI 452
SH G V++G +F M +GITP HY CM+DLLGR G +A +++ M +PD +
Sbjct: 564 SHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623
Query: 453 WRTLLGACRIHGHVTLGERVIERLIEL-KAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
W ++L ACRIH + +L ER E+L + K ++A YV + NIY++AG WEKV +V+ M+
Sbjct: 624 WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMR 683
Query: 512 EKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELH 571
E+ I+ P +E+ +H F +D +H EI ++++ +++ GY + SS +
Sbjct: 684 ERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQ 743
Query: 572 KVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDV 631
VD++ K L YHSE+LA+AF +++TP G + V N+R C DCH +KL S + R++
Sbjct: 744 DVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREI 803
Query: 632 ILRDHKRFHHFRGGQCSCSDYW 653
+RD RFHHF G CSC DYW
Sbjct: 804 TVRDTSRFHHFSEGVCSCGDYW 825
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 162/368 (44%), Gaps = 10/368 (2%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
FE+I FNT+I Y + ++L+ MR+ G + + S +K+ + D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
G Q+H G D+ + ++D YS+ + + +FDEMP+ D V++NV+IS
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+ ++ +L F MQ + + +SL+ G ++H +
Sbjct: 326 YSQADQYEASLHFFREMQCMG--FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
+++ NSL+ MY++C ++A +F P ++ VSW+A+ISG G ++ F +M
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL 433
+ +R D TF VL A + + G +I G N+ +VD+ + G
Sbjct: 444 RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGS 502
Query: 434 LDKAYEVITTMAVKPDPTI--WRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLL 491
+ A +V M PD W L+ A +G ++IE Q D V +L
Sbjct: 503 IKDAVQVFEEM---PDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP--DSVSIL 557
Query: 492 NIYSSAGH 499
+ ++ H
Sbjct: 558 GVLTACSH 565
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 6/223 (2%)
Query: 171 RRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGD 230
+ G + S+F V+ +R G V V+ + +++ ++ + +
Sbjct: 41 KTGFDTDTCRSNFIVEDLLR----RGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVS 96
Query: 231 DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX 290
A +FD MP R V W +++ RN+ +A LF M +S+ PD VT
Sbjct: 97 SARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPG 156
Query: 291 XXXXNSLEFGERIHNYIMERGYGGA--INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVV 348
++H + ++ G+ + +SN L+ Y LD A +F P K V
Sbjct: 157 CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSV 216
Query: 349 SWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
+++ +I+G +G E+I F +M++ G +P D TF+GVL A
Sbjct: 217 TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 298/533 (55%), Gaps = 21/533 (3%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK---- 186
+R+ F+++ + M+ Y D P++ L LY M+R N + F V
Sbjct: 170 ARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR---VPNSRPNIFTVSIAVA 226
Query: 187 -----SCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQ 241
CIR G ++H ++ + G SD +L +++MD+Y +C D+A +FD++ +
Sbjct: 227 AAAAVKCIR-----RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE 281
Query: 242 RDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE-PDDVTXXXXXXXXXXXNSLEFG 300
+D V+W MI +++R R+ SLF + + CE P++ T + E G
Sbjct: 282 KDVVSWTSMIDRYFKSSRWREGFSLFSELVGS---CERPNEYTFAGVLNACADLTTEELG 338
Query: 301 ERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVN 360
+++H Y+ G+ S+SL+ MY++CG ++ A V G P +VSW+++I G A N
Sbjct: 339 KQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQN 398
Query: 361 GYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHH 420
G EA++ F+ + + G +PD TF VLSAC+H+GLV++G+ FF + + ++ H
Sbjct: 399 GQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH 458
Query: 421 YGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK 480
Y C+VDLL R+G ++ VI+ M +KP +W ++LG C +G++ L E + L +++
Sbjct: 459 YTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518
Query: 481 AQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSH 540
+ YV + NIY++AG WE+ ++R M+E + PG E+K H F+ D SH
Sbjct: 519 PENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSH 578
Query: 541 KRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPP 600
+I E L ++ K++K GYV S LH V+D++K L YHSEKLA+AF +L+T
Sbjct: 579 PMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEE 638
Query: 601 GTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
GT ++V N+R CVDCH +K S + R + +RD RFH F GQCSC DYW
Sbjct: 639 GTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 38/360 (10%)
Query: 173 GIAANPLSSSFA--VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGD 230
G A P +S++ ++ C + + G +VH ++ G ++ ++ +Y++C
Sbjct: 78 GRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLV 137
Query: 231 DACKVFDEMPQRDTVAWNV-------------------------------MISCCVRNNR 259
DA KVFDEMP RD +WNV M++ V+ ++
Sbjct: 138 DARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQ 197
Query: 260 TRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLS 319
+AL L+ +MQ N P+ T + G+ IH +I+ G L
Sbjct: 198 PEEALVLYSLMQRVPNS-RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLW 256
Query: 320 NSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR 379
+SL+ MY +CGC+D+A +F K VVSW++MI + +E F E+ R
Sbjct: 257 SSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER 316
Query: 380 PDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYE 439
P++ TF GVL+AC+ + G M G P +VD+ + G ++ A
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 440 VITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGH 499
V+ KPD W +L+G C +G + + L LK+ D+V +N+ S+ H
Sbjct: 376 VVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLL--LKSGTKPDHVTFVNVLSACTH 432
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 10/210 (4%)
Query: 296 SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMIS 355
+LE G+++H +I G+ I + N L+ MY++CG L A +VF PN+ + SW+ M++
Sbjct: 100 ALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVN 159
Query: 356 GLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGIT 415
G A G +EA + F+EM D ++T +++ +E + + M
Sbjct: 160 GYAEVGLLEEARKLFDEM----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSR 215
Query: 416 PNIHHYGCMVDLLGRAGLLDKAYEV---ITTMAVKPDPTIWRTLLGACRIHGHVTLGERV 472
PNI V + + E+ I + D +W +L+ G + +
Sbjct: 216 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNI 275
Query: 473 IERLIELKAQEAGDYVLLLNIYSSAGHWEK 502
++++E ++ + +++ Y + W +
Sbjct: 276 FDKIVE---KDVVSWTSMIDRYFKSSRWRE 302
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/692 (31%), Positives = 350/692 (50%), Gaps = 86/692 (12%)
Query: 35 IHLLHSPQPNPHHPVEPAINLAPIPHHKRNQPTPISSFPPSHKEQVISTIKSVSQKPHLL 94
+HLLH P+ + + + +P + +Q +P + QV+ T + L
Sbjct: 8 LHLLHFPKFRKFQSRKVS---SSLPKLELDQKSPQETVFLLG--QVLDTYPDIRT---LR 59
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
+H+ I+ L + ++ + + A L+D +R+ F++I V N MIR+Y
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYA---SLKDVASARKVFDEIPERNVIIINVMIRSYV 116
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ +G+ ++ M + + + +K+C IV G ++H + K G S
Sbjct: 117 NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 215 LLTAVMDL-------------------------------YSQCRKGDDACKV-------- 235
+ ++ + Y+Q ++ DDA +V
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 236 -----------------------------FDEMPQRDTVAWNVMISCCVRNNRTRDALSL 266
F +M ++ V+WNVMI ++N +A+ L
Sbjct: 237 ISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVEL 296
Query: 267 FDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMY 326
+ M++ + EPD V+ ++L G++IH YI + + L N+LI MY
Sbjct: 297 YSRMEA--DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMY 354
Query: 327 SRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFT 386
++CGCL+KA +VF ++ VVSW+AMIS +G G +A+ F ++Q G+ PD F
Sbjct: 355 AKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFV 414
Query: 387 GVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAV 446
L+ACSH+GL++EG S F M + ITP + H CMVDLLGRAG + +AY I M++
Sbjct: 415 TTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSM 474
Query: 447 KPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEV 506
+P+ +W LLGACR+H +G ++L +L +++G YVLL NIY+ AG WE+V +
Sbjct: 475 EPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNI 534
Query: 507 RTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVEL 566
R +MK K ++ PG +E+ ++H F+V D SH + EIY LD + K++K GYV +
Sbjct: 535 RNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDS 594
Query: 567 SSELHKVDDKEKGYVLSYHSEKLAIAFGVLATP-----PGTTLRVATNVRVCVDCHNFLK 621
S LH V++++K L+ HSEKLAI F ++ T T+R+ N+R+C DCH K
Sbjct: 595 ESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAK 654
Query: 622 LFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
L S + +R++I+RD RFH FR G CSC DYW
Sbjct: 655 LISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 191/530 (36%), Positives = 302/530 (56%), Gaps = 7/530 (1%)
Query: 127 DPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANP--LSSSFA 184
D + +R+ F+++ ++ +N MI + ++GL L+R+M G + + L S F+
Sbjct: 40 DLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFS 99
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
+ +R + I G Q+H K G + D ++ +++ +Y + K D V MP R+
Sbjct: 100 GSAGLRSVSI--GQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNL 157
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
VAWN +I +N L L+ +M+ + C P+ +T G++IH
Sbjct: 158 VAWNTLIMGNAQNGCPETVLYLYKMMKISG--CRPNKITFVTVLSSCSDLAIRGQGQQIH 215
Query: 305 NYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGK 364
++ G + + +SLI+MYS+CGCL A + F ++ V WS+MIS +G G
Sbjct: 216 AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGD 275
Query: 365 EAIEAFEEM-QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGC 423
EAIE F M ++ + ++ F +L ACSHSGL D+G+ FD M+ ++G P + HY C
Sbjct: 276 EAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTC 335
Query: 424 MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQE 483
+VDLLGRAG LD+A +I +M +K D IW+TLL AC IH + + +RV + ++++ +
Sbjct: 336 VVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPND 395
Query: 484 AGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRK 543
+ YVLL N+++SA W V+EVR M++K ++ G E KG VH+F + D S +
Sbjct: 396 SACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKS 455
Query: 544 GEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTT 603
EIY L ++ ++K+ GY + +S LH +D++EK L HSEKLA+AF ++ P G
Sbjct: 456 KEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAP 515
Query: 604 LRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+R+ N+RVC DCH K S + NR++ LRD RFHHF G+CSC DYW
Sbjct: 516 IRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 292/532 (54%), Gaps = 8/532 (1%)
Query: 123 GPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSS 182
G + D + + F+Q+ V + TMI ++ + L L+++M R I + +
Sbjct: 173 GKVDDAL---KLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT 229
Query: 183 FAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR 242
+ +C G+QVH + K G + + +++ Y+ C++ D+ KVFDE
Sbjct: 230 CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE 289
Query: 243 DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
W ++S N + DALS+F M N P+ T +L++G+
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGM--LRNSILPNQSTFASGLNSCSALGTLDWGKE 347
Query: 303 IHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGY 362
+H ++ G + NSL+ MYS G ++ A VF+ KS+VSW+++I G A +G
Sbjct: 348 MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR 407
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFG-ITPNIHHY 421
GK A F +M R+ PD+ TFTG+LSACSH G +++G F M I I HY
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHY 467
Query: 422 GCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKA 481
CMVD+LGR G L +A E+I M VKP+ +W LL ACR+H V GE+ + L +
Sbjct: 468 TCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS 527
Query: 482 QEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHK 541
+ + YVLL NIY+SAG W V+++R MK+ I PG + ++G HEF D H
Sbjct: 528 KSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHC 587
Query: 542 RKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPG 601
+ IYE L+ + ++LK GY + S LH V+D++K +L YHSE+LAIAFG++ T G
Sbjct: 588 SR--IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEG 645
Query: 602 TTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+ + V N+RVC DCH +KL SGV R+++LRD RFHHF+ G CSC DYW
Sbjct: 646 SAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 171/398 (42%), Gaps = 32/398 (8%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA-NPLSSSFA----V 185
+R F Q+ P VS + MI Y+ S+ L L+ +M R + + N + S +
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDM 113
Query: 186 KSCIRFLD------IVGGVQVHCNVFKDGHQ------------SDSLLLTAVMDLYSQCR 227
+ ++ D +V + F+ G D+ +++ Y Q
Sbjct: 114 NTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFG 173
Query: 228 KGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXX 287
K DDA K+F +MP ++ ++W MI +N R+ +AL LF M +C +
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML----RCCIKSTSRPFT 229
Query: 288 XXXXXXXNSLEF--GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK 345
N+ F G ++H I++ G+ +S SLI Y+ C + + +VF ++
Sbjct: 230 CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE 289
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
V W+A++SG ++N ++A+ F M R I P+ TF L++CS G +D G
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGH 465
+ + G+ + +V + +G ++ A V + K W +++ C HG
Sbjct: 350 GVAV-KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGR 407
Query: 466 VTLGERVIERLIEL-KAQEAGDYVLLLNIYSSAGHWEK 502
+ ++I L K + + LL+ S G EK
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEK 445
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 136/314 (43%), Gaps = 49/314 (15%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
+Q+H I+ +++ VS ++ A + D SR+ F++ V+ + ++ Y
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGD---SRKVFDEKVHEQVAVWTALLSGY 301
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDS 213
S++ + L ++ M R I N + + + SC + G ++H K G ++D+
Sbjct: 302 SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDA 361
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQST 273
+ +++ +YS +DA VF ++ ++ V+WN +I C ++ R + A +F M
Sbjct: 362 FVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
+ EPD++T L++ S CG L+
Sbjct: 422 NK--EPDEITF-----------------------------------TGLLSACSHCGFLE 444
Query: 334 KAYEVF------MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTG 387
K ++F + ++ + ++ M+ L G KEA E E R+ ++P++ +
Sbjct: 445 KGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIE---RMVVKPNEMVWLA 501
Query: 388 VLSACSHSGLVDEG 401
+LSAC VD G
Sbjct: 502 LLSACRMHSDVDRG 515
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 29/194 (14%)
Query: 227 RKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM--------QSTSNKC- 277
R+ D+A +VF+++P + MI+ R+NR DAL+LFD M S + C
Sbjct: 49 RRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCV 108
Query: 278 ----------------EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
E V+ ++ ER+ Y M A NS
Sbjct: 109 ECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLF-YQMPVKDTAAW---NS 164
Query: 322 LIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPD 381
++ Y + G +D A ++F P K+V+SW+ MI GL N EA++ F+ M R I+
Sbjct: 165 MVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKST 224
Query: 382 DQTFTGVLSACSHS 395
+ FT V++AC+++
Sbjct: 225 SRPFTCVITACANA 238
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/554 (35%), Positives = 305/554 (55%), Gaps = 37/554 (6%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA-NPLSSSFAVKSCIRFLD 193
FEQ+ + +N+MI ++ + L ++ M R + + + + + + +C
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQC--------------------------- 226
+ G Q+H ++ G ++L A++ +YS+C
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 227 ----RKGD--DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPD 280
+ GD A +F + RD VAW MI ++ +A++LF M + P+
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR--PN 412
Query: 281 DVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVF- 339
T SL G++IH ++ G ++++SN+LI MY++ G + A F
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 340 MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVD 399
+ + VSW++MI LA +G+ +EA+E FE M G+RPD T+ GV SAC+H+GLV+
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 400 EGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
+G +FD M I P + HY CMVDL GRAGLL +A E I M ++PD W +LL A
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Query: 460 CRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTP 519
CR+H ++ LG+ ERL+ L+ + +G Y L N+YS+ G WE+ A++R MK+ ++
Sbjct: 593 CRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652
Query: 520 GCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKG 579
G IE+K VH F V+D +H K EIY T+ I ++K GYV + +S LH ++++ K
Sbjct: 653 GFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKE 712
Query: 580 YVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRF 639
+L +HSEKLAIAFG+++TP TTLR+ N+RVC DCH +K S + R++I+RD RF
Sbjct: 713 QILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRF 772
Query: 640 HHFRGGQCSCSDYW 653
HHF+ G CSC DYW
Sbjct: 773 HHFKDGFCSCRDYW 786
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 65/258 (25%)
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQC-----------------------------RKGD 230
VHC V K G L+ +M++YS+ ++GD
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 231 --DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXX 288
C+ FD++PQRD+V+W MI + A+ + M EP T
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM--VKEGIEPTQFTLTNVL 153
Query: 289 XXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRC------------------- 329
+E G+++H++I++ G G +++SNSL+ MY++C
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 330 ------------GCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
G +D A F + +V+W++MISG GY A++ F +M R
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 378 -IRPDDQTFTGVLSACSH 394
+ PD T VLSAC++
Sbjct: 274 LLSPDRFTLASVLSACAN 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 320 NSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR 379
N++++ YS+ G +D E F P + VSW+ MI G G +AI +M + GI
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 380 PDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYE 439
P T T VL++ + + ++ G I + G+ N+ ++++ + G A
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHS-FIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 440 VITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE 478
V M V+ D + W ++ G + L E++ E
Sbjct: 203 VFDRMVVR-DISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 12/253 (4%)
Query: 124 PLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSF 183
L D ++ F + V + MI Y S + + L+R M G N + +
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418
Query: 184 AVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP-QR 242
+ + G Q+H + K G + A++ +Y++ A + FD + +R
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478
Query: 243 DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
DTV+W MI ++ +AL LF+ M PD +T + G +
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETM--LMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 303 IHNYIMERGYGGAI-NLSN--SLIAMYSRCGCLDKAYEVFMGTP-NKSVVSWSAMISGLA 358
+ M + I LS+ ++ ++ R G L +A E P VV+W +++S
Sbjct: 537 YFD--MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 594
Query: 359 VN---GYGKEAIE 368
V+ GK A E
Sbjct: 595 VHKNIDLGKVAAE 607
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 296/531 (55%), Gaps = 6/531 (1%)
Query: 123 GPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSS 182
G ++D + + F + + VS + MI+ + + ++ + +R+M+ +G+ +
Sbjct: 219 GMIEDAL---QLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 183 FAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR 242
+ +C I G Q+H + + Q + +A++D+Y +C+ A VFD M Q+
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 243 DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
+ V+W M+ + R +A+ +F MQ + +PD T +SLE G +
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG--IDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 303 IHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGY 362
H + G + +SNSL+ +Y +CG +D + +F + VSW+AM+S A G
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYG 422
E I+ F++M + G++PD T TGV+SACS +GLV++G +F M E+GI P+I HY
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 423 CMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ 482
CM+DL R+G L++A I M PD W TLL ACR G++ +G+ E LIEL
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH 572
Query: 483 EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKR 542
Y LL +IY+S G W+ VA++R M+EK ++ PG I+ KG +H F DD S
Sbjct: 573 HPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPY 632
Query: 543 KGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGT 602
+IY L+++N ++ GY + S H V++ K +L+YHSE+LAIAFG++ P G
Sbjct: 633 LDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQ 692
Query: 603 TLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+RV N+RVCVDCHN K S V R++++RD RFH F+ G CSC D+W
Sbjct: 693 PIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 236 FDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXN 295
F+++P RD V WNV+I + A+ ++ M + VT
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS-ANLTRVTLMTMLKLSSSNG 153
Query: 296 SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSV-------- 347
+ G++IH +++ G+ + + + L+ MY+ GC+ A +VF G +++
Sbjct: 154 HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMG 213
Query: 348 ----------------------VSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTF 385
VSW+AMI GLA NG KEAIE F EM+ G++ D F
Sbjct: 214 GLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 386 TGVLSACSHSGLVDEG 401
VL AC G ++EG
Sbjct: 274 GSVLPACGGLGAINEG 289
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 312/559 (55%), Gaps = 6/559 (1%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+H +V + L ++ + +S G + + SRR Q+ R V +N +I Y+
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE---SRRVLLQMPRRDVVAWNALIGGYAE 440
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVG-GVQVHCNVFKDGHQSDSL 214
+ P K L ++ MR G+++N ++ + +C+ D++ G +H + G +SD
Sbjct: 441 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 500
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ +++ +Y++C + +F+ + R+ + WN M++ + + L L M+S
Sbjct: 501 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 560
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
D + LE G+++H ++ G+ + N+ MYS+CG + +
Sbjct: 561 --VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 618
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
++ + N+S+ SW+ +IS L +GY +E F EM +GI+P TF +L+ACSH
Sbjct: 619 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSH 678
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
GLVD+G++++D + +FG+ P I H C++DLLGR+G L +A I+ M +KP+ +WR
Sbjct: 679 GGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWR 738
Query: 455 TLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKA 514
+LL +C+IHG++ G + E L +L+ ++ YVL N++++ G WE V VR M K
Sbjct: 739 SLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKN 798
Query: 515 IQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVD 574
I+ C ++LK V F + D +H + EIY L+DI K +K +GYV + S L D
Sbjct: 799 IKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTD 858
Query: 575 DKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILR 634
+++K + L HSE+LA+A+ +++TP G+T+R+ N+R+C DCH+ K S V R ++LR
Sbjct: 859 EEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLR 918
Query: 635 DHKRFHHFRGGQCSCSDYW 653
D RFHHF G CSC DYW
Sbjct: 919 DQYRFHHFERGLCSCKDYW 937
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 174/378 (46%), Gaps = 31/378 (8%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQI-NRPIVSHFNTMIRA 152
+Q+H + + L+ D VS L + G + SR+ FE++ +R +VS + M+
Sbjct: 79 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVS---CSRKVFEEMPDRNVVSWTSLMV-G 134
Query: 153 YSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSD 212
YS P++ + +Y+ MR G+ N S S + SC D G Q+ V K G +S
Sbjct: 135 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 194
Query: 213 SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
+ +++ + D A +FD+M +RDT++WN + + +N ++ +F +M+
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
+ E + T + ++G IH +++ G+ + + N+L+ MY+ G
Sbjct: 255 FHD--EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 312
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
+A VF P K ++SW+++++ +G +A+ M G + TFT L+AC
Sbjct: 313 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 372
Query: 393 S-----------HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVI 441
H +V G+ F++++IG +V + G+ G + ++ V+
Sbjct: 373 FTPDFFEKGRILHGLVVVSGL-FYNQIIGN-----------ALVSMYGKIGEMSESRRVL 420
Query: 442 TTMAVKPDPTIWRTLLGA 459
M + D W L+G
Sbjct: 421 LQMP-RRDVVAWNALIGG 437
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 186/410 (45%), Gaps = 25/410 (6%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
VIS+ + + QI +V + L AV S +++ G + + Y+ F+Q++
Sbjct: 166 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN---SLISMLGSMGNVDYANYIFDQMS 222
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVG--- 196
+N++ AY+ + ++ ++ MRR N + S L ++G
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS-------TLLSVLGHVD 275
Query: 197 ----GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
G +H V K G S + ++ +Y+ + +A VF +MP +D ++WN +++
Sbjct: 276 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 335
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
V + R+ DAL L M S+ + VT + E G +H ++ G
Sbjct: 336 SFVNDGRSLDALGLLCSMISSGKSV--NYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 393
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+ N+L++MY + G + ++ V + P + VV+W+A+I G A + +A+ AF+
Sbjct: 394 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 453
Query: 373 MQRIGIRPDDQTFTGVLSACSHSG-LVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
M+ G+ + T VLSAC G L++ G ++ G + H ++ + +
Sbjct: 454 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKC 512
Query: 432 GLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKA 481
G L + ++ + + T W +L A HGH GE V++ + ++++
Sbjct: 513 GDLSSSQDLFNGLDNRNIIT-WNAMLAANAHHGH---GEEVLKLVSKMRS 558
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 3/250 (1%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIV-GGVQVHCNV 204
+NTM+ +G+ +R M GI + + V +C R + GVQVH V
Sbjct: 26 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 85
Query: 205 FKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDAL 264
K G SD + TA++ LY + KVF+EMP R+ V+W ++ + +
Sbjct: 86 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 145
Query: 265 SLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIA 324
++ M+ C + ++ SL G +I +++ G + + NSLI+
Sbjct: 146 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESL--GRQIIGQVVKSGLESKLAVENSLIS 203
Query: 325 MYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQT 384
M G +D A +F + +SW+++ + A NG+ +E+ F M+R + T
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 263
Query: 385 FTGVLSACSH 394
+ +LS H
Sbjct: 264 VSTLLSVLGH 273
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 122/256 (47%), Gaps = 11/256 (4%)
Query: 222 LYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDD 281
+Y++ + A +FD MP R+ V+WN M+S VR + + F M K P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIK--PSS 58
Query: 282 VTXXXXXXXXXXXNSL-EFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFM 340
S+ G ++H ++ + G + +S +++ +Y G + + +VF
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 341 GTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDE 400
P+++VVSW++++ G + G +E I+ ++ M+ G+ ++ + + V+S+C L DE
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL--LKDE 176
Query: 401 GMSFFDRMIGEF---GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
S ++IG+ G+ + ++ +LG G +D A + M+ + D W ++
Sbjct: 177 --SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIA 233
Query: 458 GACRIHGHVTLGERVI 473
A +GH+ R+
Sbjct: 234 AAYAQNGHIEESFRIF 249
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/525 (37%), Positives = 295/525 (56%), Gaps = 13/525 (2%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYL-YRDMRRRGIAANPLSSSFAVKSCI 189
++ FF+++ + +NTMI Y+ +K L Y M + ++ N + S + C
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYI--EC- 199
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP-QRDTVAWN 248
G ++ + FK + TA++ Y + +K + A +F +M ++ V WN
Sbjct: 200 ------GDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
MIS V N+R D L LF M P+ ++L+ G +IH +
Sbjct: 254 AMISGYVENSRPEDGLKLFRAM--LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
+ + SLI+MY +CG L A+++F K VV+W+AMISG A +G +A+
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
F EM IRPD TF VL AC+H+GLV+ GM++F+ M+ ++ + P HY CMVDLL
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYV 488
GRAG L++A ++I +M +P ++ TLLGACR+H +V L E E+L++L +Q A YV
Sbjct: 432 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491
Query: 489 LLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYE 548
L NIY+S WE VA VR MKE + PG IE++ VH F D H I++
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHK 551
Query: 549 TLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVAT 608
L ++ K++K+AGY EL LH V++++K +L +HSEKLA+AFG + P G+ ++V
Sbjct: 552 KLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFK 611
Query: 609 NVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
N+R+C DCH +K S + R++I+RD RFHHF+ G CSC DYW
Sbjct: 612 NLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 155/383 (40%), Gaps = 57/383 (14%)
Query: 185 VKSCIRFLDIVGGVQV-HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRD 243
+ C+R DI G ++V H K+ +SLL+ D +A ++FDE+P+ D
Sbjct: 68 IARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM----EAHQLFDEIPEPD 123
Query: 244 TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERI 303
T ++N+M+SC VRN A S FD M D + +E +
Sbjct: 124 TFSYNIMLSCYVRNVNFEKAQSFFDRMPFK------DAASWNTMITGYARRGEMEKAREL 177
Query: 304 HNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTP-------------------- 343
+ME+ N++I+ Y CG L+KA F P
Sbjct: 178 FYSMMEKNEVSW----NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKV 233
Query: 344 ------------NKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
NK++V+W+AMISG N ++ ++ F M GIRP+ + L
Sbjct: 234 ELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG 293
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
CS + G +++ + + ++ ++ + + G L A+++ M K D
Sbjct: 294 CSELSALQLGRQ-IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVV 351
Query: 452 IWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKV----AEVR 507
W ++ HG+ + +I+ K + D++ + + + H V A
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRP--DWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 508 TLMKEKAIQTTPG--CCTIELKG 528
+++++ ++ P C ++L G
Sbjct: 410 SMVRDYKVEPQPDHYTCMVDLLG 432
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 188/564 (33%), Positives = 311/564 (55%), Gaps = 9/564 (1%)
Query: 97 HAHIVCTTLVHDPAV--SLHFLSR-VALSGPLQDPIYSRRFFEQI-NRPIVSH--FNTMI 150
H +C+ ++++P++ + LS+ + L + +R+ F+ + + +++ + M
Sbjct: 149 HGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMA 208
Query: 151 RAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQ 210
YS + SP+ L +Y DM I S S A+K+C+ D+ G +H + K +
Sbjct: 209 IGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEK 268
Query: 211 SDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM 270
D ++ ++ LY + DDA KVFD M +R+ V WN +IS + R + +LF M
Sbjct: 269 VDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKM 328
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG 330
Q +T +L G+ IH I++ + L NSL+ MY +CG
Sbjct: 329 QEEMIGFSWATLTTILPACSRVA--ALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCG 386
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLS 390
++ + VF K + SW+ M++ A+NG +E I FE M G+ PD TF +LS
Sbjct: 387 EVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLS 446
Query: 391 ACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDP 450
CS +GL + G+S F+RM EF ++P + HY C+VD+LGRAG + +A +VI TM KP
Sbjct: 447 GCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSA 506
Query: 451 TIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLM 510
+IW +LL +CR+HG+V++GE + L L+ G+YV++ NIY+ A W+ V ++R +M
Sbjct: 507 SIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMM 566
Query: 511 KEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETL-DDINKQLKIAGYVVELSSE 569
K++ ++ GC +++K + FV R + Y+ + ++ + ++ +GY S
Sbjct: 567 KQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVV 626
Query: 570 LHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNR 629
LH VD++ K + HSE+LA + ++ T G +R+ N+RVC DCH+++K+ S V R
Sbjct: 627 LHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRR 686
Query: 630 DVILRDHKRFHHFRGGQCSCSDYW 653
++LRD KRFHHF G CSC DYW
Sbjct: 687 VIVLRDTKRFHHFVDGICSCKDYW 710
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 189/530 (35%), Positives = 287/530 (54%), Gaps = 7/530 (1%)
Query: 127 DPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK 186
D I +R F + +N++I Y S + + L++ M A+ ++ +
Sbjct: 357 DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
Query: 187 SCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVA 246
R D+ G +H N K G D + A++D+Y++C + D+ K+F M DTV
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT 476
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
WN +IS CVR L + Q ++ PD T + G+ IH
Sbjct: 477 WNTVISACVRFGDFATGLQV--TTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEA 366
++ GY + + N+LI MYS+CGCL+ + VF + VV+W+ MI + G G++A
Sbjct: 535 LLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKA 594
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
+E F +M++ GI PD F ++ ACSHSGLVDEG++ F++M + I P I HY C+VD
Sbjct: 595 LETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGD 486
LL R+ + KA E I M +KPD +IW ++L ACR G + ERV R+IEL + G
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGY 714
Query: 487 YVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEI 546
+L N Y++ W+KV+ +R +K+K I PG IE+ VH F D S + I
Sbjct: 715 SILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAI 774
Query: 547 YETLDDINKQLKIAGYV---VELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTT 603
Y++L+ + + GY+ E+S L + ++K + ++ HSE+LAIAFG+L T PGT
Sbjct: 775 YKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRR--LICGHSERLAIAFGLLNTEPGTP 832
Query: 604 LRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
L+V N+RVC DCH KL S + R++++RD RFH F+ G CSC D W
Sbjct: 833 LQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 3/204 (1%)
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM-PQRDTVAWNVMISCCVRN 257
++H V G S ++D YS R+ + VF + P ++ WN +I +N
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 258 NRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAIN 317
+AL + ++ + K PD T E G+ ++ I++ G+ +
Sbjct: 85 GLFPEALEFYGKLRES--KVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142
Query: 318 LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
+ N+L+ MYSR G L +A +VF P + +VSW+++ISG + +GY +EA+E + E++
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 378 IRPDDQTFTGVLSACSHSGLVDEG 401
I PD T + VL A + +V +G
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 178/399 (44%), Gaps = 17/399 (4%)
Query: 106 VHDPAVSLHFLSRVALSGPLQD-------PIYSRRFFEQIN-RPIVSHFNTMIRAYSMSD 157
+H +SL S SG L D P S F +++ V +N++IRA+S +
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 158 SPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLT 217
+ L Y +R ++ + + +K+C D G V+ + G +SD +
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGN 145
Query: 218 AVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKC 277
A++D+YS+ A +VFDEMP RD V+WN +IS + +AL ++ ++++
Sbjct: 146 ALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS--WI 203
Query: 278 EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYE 337
PD T ++ G+ +H + ++ G + ++N L+AMY + A
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 338 VFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGL 397
VF + VS++ MI G +E++ F E +PD T + VL AC H
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRD 322
Query: 398 VDEGMSFFDRMI-GEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTL 456
+ ++ M+ F + + + ++D+ + G + A +V +M K D W ++
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSI 379
Query: 457 LGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYS 495
+ G + ++ + ++ + +E D++ L + S
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIM--EEQADHITYLMLIS 416
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 202/567 (35%), Positives = 308/567 (54%), Gaps = 12/567 (2%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+H V +V+ F++ + G L++ + +++ + +N+MI AY
Sbjct: 159 QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV--SWNSMIVAYG 216
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
K L LY++M +G + + + + + ++GG Q H + K G +S
Sbjct: 217 QHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSH 276
Query: 215 LLTAVMDLYSQCRKGD---DACKVFDEMPQRDTVAWNVMISCCVRNNR-TRDALSLFDVM 270
+ + ++D YS+C D D+ KVF E+ D V WN MIS N + +A+ F M
Sbjct: 277 VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM 336
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY-GGAINLSNSLIAMYSRC 329
Q ++ PDD + +S ++IH ++ I+++N+LI++Y +
Sbjct: 337 QRIGHR--PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKS 394
Query: 330 GCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVL 389
G L A VF P + VS++ MI G A +G+G EA+ ++ M GI P+ TF VL
Sbjct: 395 GNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVL 454
Query: 390 SACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPD 449
SAC+H G VDEG +F+ M F I P HY CM+DLLGRAG L++A I M KP
Sbjct: 455 SACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPG 514
Query: 450 PTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTL 509
W LLGACR H ++ L ER L+ ++ A YV+L N+Y+ A WE++A VR
Sbjct: 515 SVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKS 574
Query: 510 MKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSE 569
M+ K I+ PGC IE+K H FV +D SH E+ E L+++ K++K GYV++
Sbjct: 575 MRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWA 634
Query: 570 LHKVDDKEKGYV---LSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGV 626
+ K D+ +G L +HSEKLA+AFG+++T G L V N+R+C DCHN +K S V
Sbjct: 635 MVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAV 694
Query: 627 YNRDVILRDHKRFHHFRGGQCSCSDYW 653
R++I+RD+ RFH F+ G+CSC DYW
Sbjct: 695 AGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 8/242 (3%)
Query: 219 VMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
++ Y++ K A ++FDE+PQ DTV++N +IS T A+ LF M+ E
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLG--FE 137
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEV 338
D T + ++ +++H + + G+ +++N+ + YS+ G L +A V
Sbjct: 138 VDGFT--LSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 339 FMGTPN-KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGL 397
F G + VSW++MI + G +A+ ++EM G + D T VL+A +
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 398 VDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAY--EVITTMAVKPDPTIWRT 455
+ G F ++I + G N H ++D + G D Y E + + PD +W T
Sbjct: 256 LIGGRQFHGKLI-KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNT 314
Query: 456 LL 457
++
Sbjct: 315 MI 316
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 345 bits (884), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 170/424 (40%), Positives = 260/424 (61%), Gaps = 4/424 (0%)
Query: 232 ACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXX 291
A +VFD M +R+ +W +I RN +AL LF +MQ + P T
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR--PTFPTLISILSVC 341
Query: 292 XXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWS 351
SL G+++H ++ + + +++ L+ MY +CG L K+ +F P+K ++ W+
Sbjct: 342 ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401
Query: 352 AMISGLAVNGYGKEAIEAFEEMQRIG-IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG 410
++ISG A +G G+EA++ F EM G +P++ TF LSACS++G+V+EG+ ++ M
Sbjct: 402 SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Query: 411 EFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGE 470
FG+ P HY CMVD+LGRAG ++A E+I +M V+PD +W +LLGACR H + + E
Sbjct: 462 VFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAE 521
Query: 471 RVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVV 530
++LIE++ + +G Y+LL N+Y+S G W VAE+R LMK + ++ +PGC E++ V
Sbjct: 522 FCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKV 581
Query: 531 HEFVVDDV-SHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKL 589
H F + SH + I + LD+++ L+ AGY + S LH VD++EK L YHSE+L
Sbjct: 582 HAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERL 641
Query: 590 AIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSC 649
A+A+ +L G +RV N+RVC DCH +K+ S V R++ILRD RFHHFR G+CSC
Sbjct: 642 AVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSC 701
Query: 650 SDYW 653
DYW
Sbjct: 702 KDYW 705
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 162/404 (40%), Gaps = 71/404 (17%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA-NPLSSSF----AV 185
+R+ F+ + +S +N+M+ Y + P+ L+ +M R I + N L S + +
Sbjct: 36 ARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEI 95
Query: 186 KSCIRFLDIV------------------GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCR 227
+ D++ G V V ++F + + + T ++ + Q
Sbjct: 96 DEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDG 155
Query: 228 KGDDACK-------------------------------VFDEMPQRDTVAWNVMISCCVR 256
+ DDACK +FDEM +R + W M++ +
Sbjct: 156 RIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQ 215
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
NNR DA +FDVM E +V+ +E E + + + +
Sbjct: 216 NNRVDDARKIFDVMP------EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK----PV 265
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
N++I+ + G + KA VF ++ SW +I NG+ EA++ F MQ+
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 377 GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG-EFGITPNIHHYGCMVDLLGRAGLLD 435
G+RP T +LS C+ + G +++ +F + +++ ++ + + G L
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV--DVYVASVLMTMYIKCGELV 383
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
K+ + K D +W +++ HG LGE ++ E+
Sbjct: 384 KSKLIFDRFPSK-DIIMWNSIISGYASHG---LGEEALKVFCEM 423
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 128/290 (44%), Gaps = 27/290 (9%)
Query: 231 DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX 290
DA K+FDEMP R+ ++WN ++S ++N +A +FD+M E + V+
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMP------ERNVVSWTALVKG 119
Query: 291 XXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
++ E + + E+ ++ + LI + + G +D A +++ P+K ++
Sbjct: 120 YVHNGKVDVAESLFWKMPEK---NKVSWTVMLIG-FLQDGRIDDACKLYEMIPDKDNIAR 175
Query: 351 SAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG 410
++MI GL G EA E F+EM + T+T +++ + VD+ FD M
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVM-- 229
Query: 411 EFGITPNIHHYGCMVDLLG--RAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTL 468
P L+G + G ++ A E+ M VKP ++ G +
Sbjct: 230 -----PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC-NAMISGLGQKGEIAK 283
Query: 469 GERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTT 518
RV + +K + + ++ I+ G + ++ LM+++ ++ T
Sbjct: 284 ARRVFD---SMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 28/255 (10%)
Query: 224 SQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDD-- 281
S+ K +A K+FD + +WN M++ N RDA LFD M PD
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM--------PDRNI 79
Query: 282 VTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMG 341
++ ++ ++ + + ER + +L+ Y G +D A +F
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERN----VVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 342 TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTF--TGVLSACSHSGLVD 399
P K+ VSW+ M+ G +G +A + +E + PD T ++ G VD
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI------PDKDNIARTSMIHGLCKEGRVD 189
Query: 400 EGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
E FD M IT + MV G+ +D A ++ M K + + W ++L
Sbjct: 190 EAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WTSMLMG 243
Query: 460 CRIHGHVTLGERVIE 474
+G + E + E
Sbjct: 244 YVQNGRIEDAEELFE 258
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 107/268 (39%), Gaps = 35/268 (13%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+RR F+ + + + T+I+ + + + L L+ M+++G+ + + C
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCAS 343
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
+ G QVH + + D + + +M +Y +C + + +FD P +D + WN +
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
IS + +AL +F M S +P++VT +E G +I+ ME
Sbjct: 404 ISGYASHGLGEEALKVFCEM-PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYES-MES 461
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
+G + A Y + M+ L G EA+E
Sbjct: 462 VFG-----VKPITAHY------------------------ACMVDMLGRAGRFNEAMEMI 492
Query: 371 EEMQRIGIRPDDQTFTGVLSAC-SHSGL 397
+ M + PD + +L AC +HS L
Sbjct: 493 DSMT---VEPDAAVWGSLLGACRTHSQL 517
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/653 (30%), Positives = 334/653 (51%), Gaps = 25/653 (3%)
Query: 6 FSHSVHSSSNRFVLAATTLHSPSLSLSRCIHLLHSPQPNPHHPVEPAINLAPIPHHKRNQ 65
+S H S R VL T P+ ++ L+ N H + L +R
Sbjct: 52 YSKLDHPESARLVLRLT----PARNVVSWTSLISGLAQNGHF----STALVEFFEMRREG 103
Query: 66 PTPIS-SFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGP 124
P +FP + K + ++ H L + + V A ++ +R
Sbjct: 104 VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR------ 157
Query: 125 LQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFA 184
L+D +R+ F++I + +N I P++ + + + RR I +P S +F
Sbjct: 158 LRDD--ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR--IDGHPNSITFC 213
Query: 185 --VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR 242
+ +C +L + G+Q+H V + G +D + ++D Y +C++ + +F EM +
Sbjct: 214 AFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK 273
Query: 243 DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
+ V+W +++ V+N+ A L+ ++S + E D LE G
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLY--LRSRKDIVETSDFMISSVLSACAGMAGLELGRS 331
Query: 303 IHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGY 362
IH + ++ I + ++L+ MY +CGC++ + + F P K++V+ +++I G A G
Sbjct: 332 IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQ 391
Query: 363 GKEAIEAFEEM--QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHH 420
A+ FEEM + G P+ TF +LSACS +G V+ GM FD M +GI P H
Sbjct: 392 VDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEH 451
Query: 421 YGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK 480
Y C+VD+LGRAG++++AYE I M ++P ++W L ACR+HG LG E L +L
Sbjct: 452 YSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLD 511
Query: 481 AQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSH 540
+++G++VLL N +++AG W + VR +K I+ G I +K VH F D SH
Sbjct: 512 PKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSH 571
Query: 541 KRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPP 600
EI TL + +++ AGY +L L+ ++++EK +S+HSEKLA+AFG+L+ P
Sbjct: 572 ILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPL 631
Query: 601 GTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+R+ N+R+C DCH+F K SG R++I+RD+ RFH F+ G CSC DYW
Sbjct: 632 SVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 168/401 (41%), Gaps = 6/401 (1%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+HA IV T P ++L + + L P +R V + ++I +
Sbjct: 28 VHARIVKTLDSPPPPFLANYL--INMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQ 85
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLL 215
+ L + +MRR G+ N + A K+ V G Q+H K G D +
Sbjct: 86 NGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFV 145
Query: 216 LTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSN 275
+ D+Y + R DDA K+FDE+P+R+ WN IS V + R R+A+ F +
Sbjct: 146 GCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG 205
Query: 276 KCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKA 335
P+ +T L G ++H ++ G+ +++ N LI Y +C + +
Sbjct: 206 --HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 336 YEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHS 395
+F K+ VSW ++++ N ++A + ++ + D + VLSAC+
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 396 GLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRT 455
++ G S + + + I +VD+ G+ G ++ + + M K + +
Sbjct: 324 AGLELGRSIHAHAV-KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNS 381
Query: 456 LLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSS 496
L+G G V + + E + +Y+ +++ S+
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/531 (35%), Positives = 291/531 (54%), Gaps = 6/531 (1%)
Query: 126 QDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSF-- 183
D + F E R +VS +N++I YS K + M + P +F
Sbjct: 81 HDVCAEKLFDEMPERDLVS-WNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLS 139
Query: 184 AVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRD 243
+ +C+ G +H V K G + ++ A ++ Y + +CK+F+++ ++
Sbjct: 140 MISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKN 199
Query: 244 TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERI 303
V+WN MI ++N L+ F++ + + EPD T + + I
Sbjct: 200 LVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGH--EPDQATFLAVLRSCEDMGVVRLAQGI 257
Query: 304 HNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYG 363
H IM G+ G ++ +L+ +YS+ G L+ + VF + ++W+AM++ A +G+G
Sbjct: 258 HGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFG 317
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGC 423
++AI+ FE M GI PD TFT +L+ACSHSGLV+EG +F+ M + I P + HY C
Sbjct: 318 RDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSC 377
Query: 424 MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQE 483
MVDLLGR+GLL AY +I M ++P +W LLGACR++ LG + ERL EL+ ++
Sbjct: 378 MVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRD 437
Query: 484 AGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRK 543
+YV+L NIYS++G W+ + +R LMK+K + GC IE +H+FVV D SH
Sbjct: 438 GRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPES 497
Query: 544 GEIYETLDDINKQLKIA-GYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGT 602
+I + L +I K++K GY + LH V + K +++ HSEK+A+AFG+L P
Sbjct: 498 EKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPME 557
Query: 603 TLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+ + N+R+C DCH K S + R +I+RD KRFHHF G CSCSDYW
Sbjct: 558 PIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 5/277 (1%)
Query: 123 GPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSS 182
G D S + FE ++ + +NTMI + + +KGL + RR G + +
Sbjct: 180 GKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFL 239
Query: 183 FAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR 242
++SC + +H + G + + TA++DLYS+ + +D+ VF E+
Sbjct: 240 AVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSP 299
Query: 243 DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
D++AW M++ + RDA+ F++M PD VT +E G+
Sbjct: 300 DSMAWTAMLAAYATHGFGRDAIKHFELM--VHYGISPDHVTFTHLLNACSHSGLVEEGKH 357
Query: 303 IHNYIMER-GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK-SVVSWSAMISGLAVN 360
+ +R ++ + ++ + R G L AY + P + S W A++ V
Sbjct: 358 YFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVY 417
Query: 361 GYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGL 397
+ +A E + + R D + + + + S SGL
Sbjct: 418 KDTQLGTKAAERLFELEPR-DGRNYVMLSNIYSASGL 453
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 318 LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM--QR 375
+ + L+ Y R G A ++F P + +VSW+++ISG + GY + E M
Sbjct: 68 IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISE 127
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
+G RP++ TF ++SAC + G +EG ++ +FG+ + ++ G+ G L
Sbjct: 128 VGFRPNEVTFLSMISACVYGGSKEEGRCIHG-LVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 436 KAYEVITTMAVKPDPTIWRTLL 457
+ ++ +++K + W T++
Sbjct: 187 SSCKLFEDLSIK-NLVSWNTMI 207
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/563 (32%), Positives = 305/563 (54%), Gaps = 19/563 (3%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQ--INRPIVSHFNTMIRA 152
QIHAH++ L + ++ ++ G L + ++R F+Q + +P+ ++
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWL---VGAKRVFDQMAVKKPVAC--TGLMVG 259
Query: 153 YSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSD 212
Y+ + + L L+ D+ G+ + S +K+C ++ G Q+H V K G +S+
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 213 SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
+ T ++D Y +C + AC+ F E+ + + V+W+ +IS + ++ +A+ F ++S
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
N + T G ++H ++R G+ ++LI MYS+CGCL
Sbjct: 380 -KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCL 438
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
D A EVF N +V+W+A ISG A G EA+ FE+M G++P+ TF VL+AC
Sbjct: 439 DDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTAC 498
Query: 393 SHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI 452
SH+GLV++G D M+ ++ + P I HY CM+D+ R+GLLD+A + + M +PD
Sbjct: 499 SHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMS 558
Query: 453 WRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKE 512
W+ L C H ++ LGE E L +L ++ YVL N+Y+ AG WE+ AE+ LM E
Sbjct: 559 WKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNE 618
Query: 513 KAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHK 572
+ ++ C I+ KG +H F+V D H + EIYE L + + G+ + ++ +
Sbjct: 619 RMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD------GF---MEGDMFQ 669
Query: 573 VDDKEKGYVLSYHSEKLAIAFGVLATPPG--TTLRVATNVRVCVDCHNFLKLFSGVYNRD 630
+ E+ L HSE+LAIAFG+++ ++V N+R C DCH F K S V +
Sbjct: 670 CNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHE 729
Query: 631 VILRDHKRFHHFRGGQCSCSDYW 653
+++RD +RFHHF+ G+CSC+DYW
Sbjct: 730 IVIRDSRRFHHFKEGKCSCNDYW 752
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 163/378 (43%), Gaps = 18/378 (4%)
Query: 133 RFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFA--VKSCI- 189
+ F++++ TMI AY+ K + L+ M G P SS + +KS +
Sbjct: 139 KLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG--DKPPSSMYTTLLKSLVN 196
Query: 190 -RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
R LD G Q+H +V + G S++ + T ++++Y +C A +VFD+M + VA
Sbjct: 197 PRALDF--GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACT 254
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
++ + R RDAL LF + + E D L G++IH +
Sbjct: 255 GLMVGYTQAGRARDALKLF--VDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVA 312
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
+ G +++ L+ Y +C + A F + VSWSA+ISG +EA++
Sbjct: 313 KLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVK 372
Query: 369 AFEEMQRIGIR-PDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYG--CMV 425
F+ ++ + T+T + ACS + G I I YG ++
Sbjct: 373 TFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGS---QYGESALI 429
Query: 426 DLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ-EA 484
+ + G LD A EV +M PD W + +G+ + R+ E+++ + +
Sbjct: 430 TMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
Query: 485 GDYVLLLNIYSSAGHWEK 502
++ +L S AG E+
Sbjct: 489 VTFIAVLTACSHAGLVEQ 506
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 134/298 (44%), Gaps = 7/298 (2%)
Query: 167 RDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLL-TAVMDLYSQ 225
++M + G++ + S ++C + G +H + + G ++ S+LL V+ +Y +
Sbjct: 72 QEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVLLQNCVLQMYCE 130
Query: 226 CRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXX 285
CR +DA K+FDEM + + V+ MIS A+ LF M ++ +K P
Sbjct: 131 CRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK--PPSSMYT 188
Query: 286 XXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK 345
+L+FG +IH +++ G ++ ++ MY +CG L A VF K
Sbjct: 189 TLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVK 248
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
V+ + ++ G G ++A++ F ++ G+ D F+ VL AC+ ++ G
Sbjct: 249 KPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQ-I 307
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL-GACRI 462
+ + G+ + +VD + + A + +P+ W ++ G C++
Sbjct: 308 HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYCQM 364
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 312/560 (55%), Gaps = 6/560 (1%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
LQ+H ++V + L P V+ + ++ + S Q P SRR FE + + ++++I +
Sbjct: 35 LQLHGYVVKSGLSLIPLVANNLINFYSKS---QLPFDSRRAFEDSPQKSSTTWSSIISCF 91
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDS 213
+ ++ P L + M + + A KSC G VHC K G+ +D
Sbjct: 92 AQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADV 151
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQST 273
+ ++++D+Y++C + A K+FDEMPQR+ V W+ M+ + +AL LF ++
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFK--EAL 209
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
+D + LE G +IH ++ + + + +SL+++YS+CG +
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 334 KAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
AY+VF P K++ W+AM+ A + + ++ IE F+ M+ G++P+ TF VL+ACS
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 394 HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIW 453
H+GLVDEG +FD+M E I P HY +VD+LGRAG L +A EVIT M + P ++W
Sbjct: 330 HAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVW 388
Query: 454 RTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEK 513
LL +C +H + L +++ EL +G ++ L N Y++ G +E A+ R L++++
Sbjct: 389 GALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR 448
Query: 514 AIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKV 573
+ G +E + VH F + H++ EIYE L ++ ++++ AGY+ + S L +V
Sbjct: 449 GEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREV 508
Query: 574 DDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVIL 633
D EK + YHSE+LAIAFG++ P +RV N+RVC DCHN +K S R +I+
Sbjct: 509 DGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIV 568
Query: 634 RDHKRFHHFRGGQCSCSDYW 653
RD+ RFH F G+CSC+DYW
Sbjct: 569 RDNNRFHRFEDGKCSCNDYW 588
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 159/336 (47%), Gaps = 11/336 (3%)
Query: 187 SCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVA 246
S R + G+Q+H V K G L+ +++ YS+ + D+ + F++ PQ+ +
Sbjct: 24 SSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTT 83
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
W+ +ISC +N +L M + PDD + + G +H
Sbjct: 84 WSSIISCFAQNELPWMSLEFLKKMM--AGNLRPDDHVLPSATKSCAILSRCDIGRSVHCL 141
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEA 366
M+ GY + + +SL+ MY++CG + A ++F P ++VV+WS M+ G A G +EA
Sbjct: 142 SMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEA 201
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
+ F+E + +D +F+ V+S C++S L++ G + + + +V
Sbjct: 202 LWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVGSSLVS 260
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK-AQEAG 485
L + G+ + AY+V + VK + IW +L A H H ++VIE +K +
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHT---QKVIELFKRMKLSGMKP 316
Query: 486 DYVLLLNIYSSAGHWEKVAEVRTL---MKEKAIQTT 518
+++ LN+ ++ H V E R MKE I+ T
Sbjct: 317 NFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPT 352
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 342 bits (877), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 185/574 (32%), Positives = 311/574 (54%), Gaps = 12/574 (2%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
VIS + + + IHA+++ T D +V +G ++ + + F ++
Sbjct: 303 VISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWRE---AEKLFSRME 359
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
R + + TMI Y + P K + YR M + + + ++ + + +C D+ GV+
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNR 259
+H K S ++ ++++YS+C+ D A +F +P+++ ++W +I+ NNR
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479
Query: 260 TRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLS 319
+AL M+ T +P+ +T +L G+ IH +++ G G L
Sbjct: 480 CFEALIFLRQMKMT---LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP 536
Query: 320 NSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR 379
N+L+ MY RCG ++ A+ F + K V SW+ +++G + G G +E F+ M + +R
Sbjct: 537 NALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVR 595
Query: 380 PDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYE 439
PD+ TF +L CS S +V +G+ +F +M ++G+TPN+ HY C+VDLLGRAG L +A++
Sbjct: 596 PDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHK 654
Query: 440 VITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGH 499
I M V PDP +W LL ACRIH + LGE + + EL + G Y+LL N+Y+ G
Sbjct: 655 FIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGK 714
Query: 500 WEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKI 559
W +VA+VR +MKE + GC +E+KG VH F+ DD H + EI L+ +++
Sbjct: 715 WREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSE 774
Query: 560 AGYVVELSSELHKVDDKE--KGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCH 617
G + SE +D+ E + + HSE+ AIAFG++ T PG + V N+ +C +CH
Sbjct: 775 VG--LTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCH 832
Query: 618 NFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSD 651
+ +K S R++ +RD + FHHF+ G+CSC D
Sbjct: 833 DTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 172/372 (46%), Gaps = 24/372 (6%)
Query: 115 FLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLY-RDMRRRG 173
FL+ G L D Y F +++ + +N ++ Y+ + + LY R + G
Sbjct: 135 FLAMFVRFGNLVDAWY---VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 174 IAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDAC 233
+ + + +++C D+ G +VH +V + G++ D ++ A++ +Y +C A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 234 KVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXX 293
+FD MP+RD ++WN MIS N + L LF M+ S +PD +T
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS--VDPDLMTLTSVISACEL 309
Query: 294 XNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAM 353
G IH Y++ G+ I++ NSL MY G +A ++F K +VSW+ M
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 354 ISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEG-----MSFFDRM 408
ISG N +AI+ + M + ++PD+ T VLSAC+ G +D G ++ R+
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 409 IGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTL 468
I + N ++++ + +DKA ++ + K + W +++ R L
Sbjct: 430 ISYVIVANN------LINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLR------L 476
Query: 469 GERVIERLIELK 480
R E LI L+
Sbjct: 477 NNRCFEALIFLR 488
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 122/317 (38%), Gaps = 45/317 (14%)
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
N + +A+ L + MQ + D+ + E G ++++ + +
Sbjct: 72 NGKLEEAMKLLNSMQEL--RVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGV 129
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
L N+ +AM+ R G L A+ VF +++ SW+ ++ G A GY EA+ + M +
Sbjct: 130 ELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWV 189
Query: 377 -GIRPDDQTFTGVLSACS-----------------------------------HSGLVDE 400
G++PD TF VL C G V
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249
Query: 401 GMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGAC 460
FDRM I+ N G + + GL + + + ++V PD +++ AC
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGL--ELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 461 RIHGHVTLGERVIERLIELK-AQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTP 519
+ G LG + +I A + L +Y +AG W + ++ + M+ K I +
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW- 366
Query: 520 GCCTIELKGVVHEFVVD 536
T + G + F+ D
Sbjct: 367 ---TTMISGYEYNFLPD 380
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 340 bits (871), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 307/551 (55%), Gaps = 6/551 (1%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+H +V + L ++ + V++ G + + SRR Q+ R V +N +I Y+
Sbjct: 367 LHGLVVVSGLFYNQIIGNAL---VSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 423
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVG-GVQVHCNVFKDGHQSDSL 214
+ P K L ++ MR G+++N ++ + +C+ D++ G +H + G +SD
Sbjct: 424 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 483
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ +++ +Y++C + +F+ + R+ + WN M++ + + L L M+S
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 543
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
D + LE G+++H ++ G+ + N+ MYS+CG + +
Sbjct: 544 --VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 601
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
++ + N+S+ SW+ +IS L +GY +E F EM +GI+P TF +L+ACSH
Sbjct: 602 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSH 661
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
GLVD+G++++D + +FG+ P I H C++DLLGR+G L +A I+ M +KP+ +WR
Sbjct: 662 GGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWR 721
Query: 455 TLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKA 514
+LL +C+IHG++ G + E L +L+ ++ YVL N++++ G WE V VR M K
Sbjct: 722 SLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKN 781
Query: 515 IQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVD 574
I+ C ++LK V F + D +H + EIY L+DI K +K +GYV + S L D
Sbjct: 782 IKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTD 841
Query: 575 DKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILR 634
+++K + L HSE+LA+A+ +++TP G+T+R+ N+R+C DCH+ K S V R ++LR
Sbjct: 842 EEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLR 901
Query: 635 DHKRFHHFRGG 645
D RFHHF G
Sbjct: 902 DQYRFHHFERG 912
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 174/378 (46%), Gaps = 31/378 (8%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQI-NRPIVSHFNTMIRA 152
+Q+H + + L+ D VS L + G + SR+ FE++ +R +VS + M+
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVS---CSRKVFEEMPDRNVVSWTSLMV-G 117
Query: 153 YSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSD 212
YS P++ + +Y+ MR G+ N S S + SC D G Q+ V K G +S
Sbjct: 118 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177
Query: 213 SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
+ +++ + D A +FD+M +RDT++WN + + +N ++ +F +M+
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
+ E + T + ++G IH +++ G+ + + N+L+ MY+ G
Sbjct: 238 FHD--EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
+A VF P K ++SW+++++ +G +A+ M G + TFT L+AC
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 393 S-----------HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVI 441
H +V G+ F++++IG +V + G+ G + ++ V+
Sbjct: 356 FTPDFFEKGRILHGLVVVSGL-FYNQIIGN-----------ALVSMYGKIGEMSESRRVL 403
Query: 442 TTMAVKPDPTIWRTLLGA 459
M + D W L+G
Sbjct: 404 LQMP-RRDVVAWNALIGG 420
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 186/410 (45%), Gaps = 25/410 (6%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
VIS+ + + QI +V + L AV S +++ G + + Y+ F+Q++
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN---SLISMLGSMGNVDYANYIFDQMS 205
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVG--- 196
+N++ AY+ + ++ ++ MRR N + S L ++G
Sbjct: 206 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS-------TLLSVLGHVD 258
Query: 197 ----GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
G +H V K G S + ++ +Y+ + +A VF +MP +D ++WN +++
Sbjct: 259 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 318
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
V + R+ DAL L M S+ + VT + E G +H ++ G
Sbjct: 319 SFVNDGRSLDALGLLCSMISSGKSV--NYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 376
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+ N+L++MY + G + ++ V + P + VV+W+A+I G A + +A+ AF+
Sbjct: 377 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 436
Query: 373 MQRIGIRPDDQTFTGVLSACSHSG-LVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
M+ G+ + T VLSAC G L++ G ++ G + H ++ + +
Sbjct: 437 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKC 495
Query: 432 GLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKA 481
G L + ++ + + T W +L A HGH GE V++ + ++++
Sbjct: 496 GDLSSSQDLFNGLDNRNIIT-WNAMLAANAHHGH---GEEVLKLVSKMRS 541
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 3/250 (1%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIV-GGVQVHCNV 204
+NTM+ +G+ +R M GI + + V +C R + GVQVH V
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 205 FKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDAL 264
K G SD + TA++ LY + KVF+EMP R+ V+W ++ + +
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128
Query: 265 SLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIA 324
++ M+ C + ++ SL G +I +++ G + + NSLI+
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESL--GRQIIGQVVKSGLESKLAVENSLIS 186
Query: 325 MYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQT 384
M G +D A +F + +SW+++ + A NG+ +E+ F M+R + T
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 385 FTGVLSACSH 394
+ +LS H
Sbjct: 247 VSTLLSVLGH 256
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 239 MPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSL- 297
MP R+ V+WN M+S VR + + F M K P S+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIK--PSSFVIASLVTACGRSGSMF 58
Query: 298 EFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGL 357
G ++H ++ + G + +S +++ +Y G + + +VF P+++VVSW++++ G
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 358 AVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF---GI 414
+ G +E I+ ++ M+ G+ ++ + + V+S+C L DE S ++IG+ G+
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL--LKDE--SLGRQIIGQVVKSGL 174
Query: 415 TPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVI 473
+ ++ +LG G +D A + M+ + D W ++ A +GH+ R+
Sbjct: 175 ESKLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIEESFRIF 232
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/568 (35%), Positives = 307/568 (54%), Gaps = 17/568 (2%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
QIH + + + +VS ++ A +G L + R+ F + +N++I A +
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNE---CRKIFSSMPEHDQVSWNSIIGALA 492
Query: 155 MSD-SPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVG--GVQVHCNVFKDGHQS 211
S+ S + + + + +R G N ++ F+ G G Q+H K+
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRIT--FSSVLSAVSSLSFGELGKQIHGLALKNNIAD 550
Query: 212 DSLLLTAVMDLYSQCRKGDDACKVFDEMPQR-DTVAWNVMISCCVRNNRTRDALSLFDVM 270
++ A++ Y +C + D K+F M +R D V WN MIS + N AL L M
Sbjct: 551 EATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFM 610
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG 330
T + D +LE G +H + + + ++L+ MYS+CG
Sbjct: 611 LQTGQRL--DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCG 668
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQ-TFTGVL 389
LD A F P ++ SW++MISG A +G G+EA++ FE M+ G P D TF GVL
Sbjct: 669 RLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVL 728
Query: 390 SACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPD 449
SACSH+GL++EG F+ M +G+ P I H+ CM D+LGRAG LDK + I M +KP+
Sbjct: 729 SACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPN 788
Query: 450 PTIWRTLLGA-CRIHGH-VTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVR 507
IWRT+LGA CR +G LG++ E L +L+ + A +YVLL N+Y++ G WE + + R
Sbjct: 789 VLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKAR 848
Query: 508 TLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELS 567
MK+ ++ G + +K VH FV D SH IY+ L ++N++++ AGYV +
Sbjct: 849 KKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTG 908
Query: 568 SELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTL--RVATNVRVCVDCHNFLKLFSG 625
L+ ++ + K +LSYHSEKLA+AF VLA +TL R+ N+RVC DCH+ K S
Sbjct: 909 FALYDLEQENKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISK 967
Query: 626 VYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+ R +ILRD RFHHF+ G CSCSD+W
Sbjct: 968 IEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 187/435 (42%), Gaps = 20/435 (4%)
Query: 69 ISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLH--FLSRVALSGPLQ 126
+SSFP + + K ++H H++ T LV D V + ++ A G +
Sbjct: 315 LSSFPEYSLAEEVGLKKG-------REVHGHVITTGLV-DFMVGIGNGLVNMYAKCGSIA 366
Query: 127 DPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK 186
D R F+ ++ VS +N+MI + + + Y+ MRR I + ++
Sbjct: 367 DA--RRVFYFMTDKDSVS-WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423
Query: 187 SCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVA 246
SC G Q+H K G + + A+M LY++ ++ K+F MP+ D V+
Sbjct: 424 SCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS 483
Query: 247 WNVMISCCVRNNRTR-DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHN 305
WN +I R+ R+ +A+ F Q K + +T + E G++IH
Sbjct: 484 WNSIIGALARSERSLPEAVVCFLNAQRAGQKL--NRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 306 YIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMG-TPNKSVVSWSAMISGLAVNGYGK 364
++ N+LIA Y +CG +D ++F + V+W++MISG N
Sbjct: 542 LALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLA 601
Query: 365 EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCM 424
+A++ M + G R D + VLSA + ++ GM + + ++ +
Sbjct: 602 KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV-RACLESDVVVGSAL 660
Query: 425 VDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEA 484
VD+ + G LD A TM V+ + W +++ HG ++ E + +L Q
Sbjct: 661 VDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQGEEALKLFETM-KLDGQTP 718
Query: 485 GDYVLLLNIYSSAGH 499
D+V + + S+ H
Sbjct: 719 PDHVTFVGVLSACSH 733
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 154/352 (43%), Gaps = 25/352 (7%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFA---VKSC------IRFLDIVG 196
+N++I YS + + ++ M+ G + P +F +C +R L+
Sbjct: 174 WNSIISVYSQAGDQRSAFRIFSSMQYDG--SRPTEYTFGSLVTTACSLTEPDVRLLE--- 228
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR 256
Q+ C + K G +D + + ++ +++ A KVF++M R+ V N ++ VR
Sbjct: 229 --QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXN--SLEFGERIHNYIMERGY-G 313
+A LF M S + V L+ G +H +++ G
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
+ + N L+ MY++CG + A VF +K VSW++MI+GL NG EA+E ++ M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL 433
+R I P T LS+C+ G + + GI N+ ++ L G
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL-KLGIDLNVSVSNALMTLYAETGY 465
Query: 434 LDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG 485
L++ ++ ++M + D W +++GA +L E V+ L AQ AG
Sbjct: 466 LNECRKIFSSMP-EHDQVSWNSIIGAL-ARSERSLPEAVV---CFLNAQRAG 512
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 15/312 (4%)
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRT 260
H ++K+ D L +++ Y + A KVFDEMP R+ V+W ++S RN
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 261 RDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN 320
++AL M + FG +IH + + Y +SN
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 321 SLIAMYSRC-GCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR 379
LI+MY +C G + A F K+ VSW+++IS + G + A F MQ G R
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 380 PDDQTFTG-VLSACSHSGLVDEGMSFFDRM---IGEFGITPNIHHYGCMVDLLGRAGLLD 435
P + TF V +ACS L + + +++ I + G+ ++ +V ++G L
Sbjct: 204 PTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ---EAGDYVLLLN 492
A +V M + T+ ++G R GE + +++ + YV+LL+
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVR----QKWGEEATKLFMDMNSMIDVSPESYVILLS 316
Query: 493 IYSSAGHWEKVA 504
+ E+V
Sbjct: 317 SFPEYSLAEEVG 328
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 171/391 (43%), Gaps = 18/391 (4%)
Query: 127 DPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK 186
D + +R+ F+++ + ++ YS + ++ L RDM + GI +N + ++
Sbjct: 51 DSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLR 110
Query: 187 SC--IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQC--RKGDDACKVFDEMPQR 242
+C I + I+ G Q+H +FK + D+++ ++ +Y +C G C F ++ +
Sbjct: 111 ACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALC-AFGDIEVK 169
Query: 243 DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
++V+WN +IS + R A +F MQ ++ + E+
Sbjct: 170 NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ 229
Query: 303 IHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGY 362
I I + G + + + L++ +++ G L A +VF ++ V+ + ++ GL +
Sbjct: 230 IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKW 289
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHY- 421
G+EA + F +M + I +++ +LS+ L +E R + IT + +
Sbjct: 290 GEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348
Query: 422 ----GCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLI 477
+V++ + G + A V M K D W +++ +G +ER
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDK-DSVSWNSMITGLDQNGCFI---EAVERYK 404
Query: 478 ELKAQEA--GDYVLLLNIYSSAG-HWEKVAE 505
++ + G + L+ ++ S A W K+ +
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 295/513 (57%), Gaps = 6/513 (1%)
Query: 143 VSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLS--SSFAVKSCIRFLDIVGGVQV 200
+S F++ + Y + ++GL + R N L+ SS + S +R L++ +QV
Sbjct: 202 LSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNL--ALQV 259
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRT 260
H + + G ++ A++++Y +C K A +VFD+ ++ ++ ++
Sbjct: 260 HSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSF 319
Query: 261 RDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN 320
+AL+LF M + + P++ T + L+ G+ +H +++ GY + + N
Sbjct: 320 EEALNLFSKMDT--KEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 321 SLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRP 380
+L+ MY++ G ++ A + F G + +V+W+ MISG + +G G+EA+EAF+ M G P
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIP 437
Query: 381 DDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEV 440
+ TF GVL ACSH G V++G+ +F++++ +F + P+I HY C+V LL +AG+ A +
Sbjct: 438 NRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDF 497
Query: 441 ITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHW 500
+ T ++ D WRTLL AC + + LG++V E IE ++G YVLL NI++ + W
Sbjct: 498 MRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREW 557
Query: 501 EKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIA 560
E VA+VR+LM + ++ PG I ++ H F+ +D H IY + ++ ++K
Sbjct: 558 EGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPL 617
Query: 561 GYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFL 620
GY +++ H VD++++ LSYHSEKLA+A+G++ TP + L V NVR+C DCH+ +
Sbjct: 618 GYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAI 677
Query: 621 KLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
KL S + R +++RD RFHHF GQCSC DYW
Sbjct: 678 KLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 180/414 (43%), Gaps = 13/414 (3%)
Query: 63 RNQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALS 122
+++ TP FP +++ + S IHAH++ T + S + L
Sbjct: 23 KSKKTP---FPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLY 79
Query: 123 GPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIA-ANPLSS 181
++ + +R+ F+ + V + M++ Y S + L L++ M G + N +
Sbjct: 80 VKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVA 139
Query: 182 SFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQ 241
+ KSC I G Q H K G S + ++ +YS C +A +V D++P
Sbjct: 140 TVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY 199
Query: 242 RDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNK-CEPDDVTXXXXXXXXXXXNSLEFG 300
D ++ +S + ++ L DV++ T+N+ +++T L
Sbjct: 200 CDLSVFSSALSGYLECGAFKEGL---DVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLA 256
Query: 301 ERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVN 360
++H+ ++ G+ + +LI MY +CG + A VF T +++ + ++ +
Sbjct: 257 LQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQD 316
Query: 361 GYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHH 420
+EA+ F +M + P++ TF +L++ + L+ +G ++ + G ++
Sbjct: 317 KSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLVLKSGYRNHVMV 375
Query: 421 YGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIE 474
+V++ ++G ++ A + + M + D W T++ C HG LG +E
Sbjct: 376 GNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG---LGREALE 425
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 13/264 (4%)
Query: 106 VHDPAVSLHFLSRVALSGPLQD-------PIYSRRFFEQINRPIVSHFNTMIRAYSMSDS 158
VH V F + V G L + +Y++R F+ + + T++ AY S
Sbjct: 259 VHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKS 318
Query: 159 PQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTA 218
++ L L+ M + + N + + + S + G +H V K G+++ ++ A
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378
Query: 219 VMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
++++Y++ +DA K F M RD V WN MIS C + R+AL FD M T
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-- 436
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMER-GYGGAINLSNSLIAMYSRCGCLDKAYE 337
P+ +T +E G N +M++ I ++ + S+ G A E
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDA-E 495
Query: 338 VFMGTP--NKSVVSWSAMISGLAV 359
FM T VV+W +++ V
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNACYV 519
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 298/551 (54%), Gaps = 38/551 (6%)
Query: 138 INRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGG 197
I IVS +N ++ ++ S ++ + +++ + G + ++ S + S + G
Sbjct: 213 IEANIVS-WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQC-----------------------------RK 228
+H V K G D +++A++D+Y + R
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 229 G--DDACKVFDEMPQR----DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDV 282
G D A ++F+ ++ + V+W +I+ C +N + +AL LF MQ K P+ V
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK--PNHV 389
Query: 283 TXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGT 342
T +L G H + + +++ ++LI MY++CG ++ + VF
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 343 PNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGM 402
P K++V W+++++G +++G KE + FE + R ++PD +FT +LSAC GL DEG
Sbjct: 450 PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 403 SFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRI 462
+F M E+GI P + HY CMV+LLGRAG L +AY++I M +PD +W LL +CR+
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRL 569
Query: 463 HGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCC 522
+V L E E+L L+ + G YVLL NIY++ G W +V +R M+ ++ PGC
Sbjct: 570 QNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Query: 523 TIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVL 582
I++K V+ + D SH + +I E +D+I+K+++ +G+ L LH V+++E+ +L
Sbjct: 630 WIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQML 689
Query: 583 SYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHF 642
HSEKLA+ FG+L TP GT L+V N+R+C DCH +K S R++ +RD RFHHF
Sbjct: 690 WGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHF 749
Query: 643 RGGQCSCSDYW 653
+ G CSC D+W
Sbjct: 750 KDGICSCGDFW 760
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 184/473 (38%), Gaps = 75/473 (15%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q HA I+ + +D +S ++ + D + + I P + F+++I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFND---ADLVLQSIPDPTIYSFSSLIYALT 92
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ + + ++ M G+ + K C G Q+HC G D+
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ ++ +Y +C + DA KVFD M +D V + ++ R + + + M+S+
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 275 NKCE---------------------------------PDDVTXXXXXXXXXXXNSLEFGE 301
+ PD VT L G
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 302 RIHNYIMERG--------------YG------GAINL-----------SNSLIAMYSRCG 330
IH Y++++G YG G I+L N+ I SR G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 331 CLDKAYEVF----MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFT 386
+DKA E+F T +VVSW+++I+G A NG EA+E F EMQ G++P+ T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 387 GVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAV 446
+L AC + + G S + + N+H ++D+ + G ++ + V M
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAV-RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 447 KPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGH 499
K + W +L+ +HG + E L+ + + D++ ++ S+ G
Sbjct: 452 K-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP--DFISFTSLLSACGQ 501
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 131/321 (40%), Gaps = 9/321 (2%)
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNN 258
Q H + K G Q+D + ++ YS +DA V +P +++ +I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 259 RTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINL 318
++ +F M S+ PD ++ + G++IH G +
Sbjct: 96 LFTQSIGVFSRM--FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 319 SNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGI 378
S+ MY RCG + A +VF +K VV+ SA++ A G +E + EM+ GI
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 379 RPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAY 438
+ ++ G+LS + SG E + F + I G P+ ++ +G + +L+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQK-IHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 439 EV---ITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYS 495
+ + + D + ++ GHV +I + + EAG + S
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY---GIISLFNQFEMMEAGVCNAYITGLS 329
Query: 496 SAGHWEKVAEVRTLMKEKAIQ 516
G +K E+ L KE+ ++
Sbjct: 330 RNGLVDKALEMFELFKEQTME 350
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 284/504 (56%), Gaps = 32/504 (6%)
Query: 182 SFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQ 241
S VK+C I G QVHC+ + +D ++ ++++D+Y++C + A VFD +
Sbjct: 109 SALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRV 168
Query: 242 RDTVAWNVMISCCVRNNRTRDALSLFDVMQ---------------STSNKCEPDDVTXXX 286
++T++W M+S ++ R +AL LF ++ + E V
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM 228
Query: 287 XXXXXXXXNSLEF---------------GERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
+ L G ++H ++ G+ + +SN+LI MY++C
Sbjct: 229 RRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSD 288
Query: 332 LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
+ A ++F ++ VVSW+++I G+A +G ++A+ +++M G++P++ TF G++ A
Sbjct: 289 VIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYA 348
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
CSH G V++G F M ++GI P++ HY C++DLLGR+GLLD+A +I TM PD
Sbjct: 349 CSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEP 408
Query: 452 IWRTLLGACRIHGHVTLGERVIERLI-ELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLM 510
W LL AC+ G +G R+ + L+ K ++ Y+LL NIY+SA W KV+E R +
Sbjct: 409 TWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKL 468
Query: 511 KEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIA-GYVVELSSE 569
E ++ PG ++E++ F + SH K +I+ L + ++++I GYV + S
Sbjct: 469 GEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWI 528
Query: 570 LHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNR 629
LH +D++EK +L +HSE+ A+A+G+L PGT +R+ N+RVC DCH LK S + R
Sbjct: 529 LHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITER 588
Query: 630 DVILRDHKRFHHFRGGQCSCSDYW 653
++I+RD R+HHF+GG+CSC+D+W
Sbjct: 589 EIIVRDATRYHHFKGGKCSCNDFW 612
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 188 CIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAW 247
C R + +H ++ K G L ++++Y +C A +VFDEMP RD +AW
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
+++ + N + LS+ +S+ PDD S++ G ++H +
Sbjct: 73 ASVLTALNQANLSGKTLSV-FSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHF 131
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
+ Y + +SL+ MY++CG L+ A VF K+ +SW+AM+SG A +G +EA+
Sbjct: 132 IVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEAL 191
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM 408
E F RI + ++T ++S SG E S F M
Sbjct: 192 ELF----RILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM 228
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 145/396 (36%), Gaps = 78/396 (19%)
Query: 92 HLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIR 151
H Q+H H + + +D V + A G L ++ F+ I + M+
Sbjct: 123 HGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS---AKAVFDSIRVKNTISWTAMVS 179
Query: 152 AYSMSDSPQKGLYLYR-------------------------------DMRRRGI-AANPL 179
Y+ S ++ L L+R +MRR + +PL
Sbjct: 180 GYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPL 239
Query: 180 SSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM 239
S V +C + G QVH V G S + A++D+Y++C A +F M
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
RD V+W +I ++ + AL+L+D M S+ +P++VT +E
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALALYDDM--VSHGVKPNEVTFVGLIYACSHVGFVEK 357
Query: 300 GERIHNYIMERGYGGAINLSN--SLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGL 357
G + M + YG +L + L+ + R G LD+A + P
Sbjct: 358 GRELFQS-MTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP-------------- 402
Query: 358 AVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPN 417
PD+ T+ +LSAC G G+ D ++ F + +
Sbjct: 403 --------------------FPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKL-KD 441
Query: 418 IHHYGCMVDLLGRAGLLDKAYEV---ITTMAVKPDP 450
Y + ++ A L K E + M V+ DP
Sbjct: 442 PSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDP 477
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 296 SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMIS 355
+L + +H +I++ G L+N+L+ +Y +CG A +VF P++ ++W+++++
Sbjct: 18 TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLT 77
Query: 356 GL-AVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI-GEFG 413
L N GK G+RPDD F+ ++ AC++ G +D G I E+
Sbjct: 78 ALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYA 137
Query: 414 ITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLG--ER 471
+ +VD+ + GLL+ A V ++ VK T+ + G+ G E
Sbjct: 138 NDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK------NTISWTAMVSGYAKSGRKEE 189
Query: 472 VIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAI 515
+E L + + L++ + +G + V T M+ + +
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 233
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 284/524 (54%), Gaps = 6/524 (1%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
++ +++ V +I YS + + ++ M + N + + + SC
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
DI G +H + K G +S T+++ +Y +C DD+ +VF + + V+W +
Sbjct: 280 LKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSL 339
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
IS V+N R AL F M S K P+ T E G +IH + +
Sbjct: 340 ISGLVQNGREEMALIEFRKMMRDSIK--PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKY 397
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
G+ + LI +Y +CGC D A VF V+S + MI A NG+G+EA++ F
Sbjct: 398 GFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLF 457
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
E M +G++P+D T VL AC++S LV+EG FD + + N HY CMVDLLGR
Sbjct: 458 ERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGR 516
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLL 490
AG L++A E++TT + PD +WRTLL AC++H V + ER+ +++E++ + G +L+
Sbjct: 517 AGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILM 575
Query: 491 LNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDV-SHKRKGEIYET 549
N+Y+S G W +V E+++ MK+ ++ P +E+ H F+ D+ SH +I E
Sbjct: 576 SNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILEN 635
Query: 550 LDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATN 609
L+++ K+ K GYV + S +++ K L HSEKLAIAF V G ++R+ N
Sbjct: 636 LEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGG-SIRILKN 694
Query: 610 VRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+RVCVDCH+++K+ S V R++I RD KRFHHFR G CSC DYW
Sbjct: 695 LRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 129/282 (45%), Gaps = 6/282 (2%)
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
++ CI I G + ++ K G ++ + + ++D +C D A +VFD M +R
Sbjct: 72 LRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFDGMSERHI 130
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
V WN +I+ +++ R+++A+ ++ +M +N PD+ T + + +R H
Sbjct: 131 VTWNSLIAYLIKHRRSKEAVEMYRLM--ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSH 188
Query: 305 NYIMERGYG-GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYG 363
+ G + + ++L+ MY + G +A V K VV +A+I G + G
Sbjct: 189 GLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGED 248
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGC 423
EA++AF+ M ++P++ T+ VL +C + + G M+ + G +
Sbjct: 249 TEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMV-KSGFESALASQTS 307
Query: 424 MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGH 465
++ + R L+D + V + P+ W +L+ +G
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGR 348
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 289/549 (52%), Gaps = 14/549 (2%)
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYL 165
V D S + + + G + + +R F+++ V + TMI Y ++
Sbjct: 169 VKDVVASTNMIGGLCREGRVDE---ARLIFDEMRERNVVTWTTMITGYRQNNRV------ 219
Query: 166 YRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQ 225
D+ R+ P + + S + + G ++ F+ + A++ + +
Sbjct: 220 --DVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGE 277
Query: 226 CRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXX 285
+ A +VFD M RD W MI R +AL LF MQ + P +
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR--PSFPSLI 335
Query: 286 XXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK 345
SL++G ++H +++ + + +++ L+ MY +CG L KA VF +K
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK 395
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
++ W+++ISG A +G G+EA++ F EM G P+ T +L+ACS++G ++EG+ F
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGH 465
+ M +F +TP + HY C VD+LGRAG +DKA E+I +M +KPD T+W LLGAC+ H
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515
Query: 466 VTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE 525
+ L E ++L E + AG YVLL +I +S W VA VR M+ + PGC IE
Sbjct: 516 LDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIE 575
Query: 526 LKGVVHEFVVDDV-SHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSY 584
+ VH F + +H + I L+ + L+ AGY + S LH VD++EK LS
Sbjct: 576 VGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSR 635
Query: 585 HSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRG 644
HSE+LA+A+G+L P G +RV N+RVC DCH +KL S V R++ILRD RFHHF
Sbjct: 636 HSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNN 695
Query: 645 GQCSCSDYW 653
G+CSC DYW
Sbjct: 696 GECSCRDYW 704
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/495 (20%), Positives = 197/495 (39%), Gaps = 88/495 (17%)
Query: 100 IVCTTLVHDPAVSLHF-LSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDS 158
I+ T + V+ F +SR++ G + + +R+FF+ + + +N+++ Y +
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINE---ARKFFDSLQFKAIGSWNSIVSGYFSNGL 63
Query: 159 PQKGLYLYRDMRRRGIAA-NPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLT 217
P++ L+ +M R + + N L S + I V+ NVF+ + + + T
Sbjct: 64 PKEARQLFDEMSERNVVSWNGLVSGYIKNRMI--------VEAR-NVFELMPERNVVSWT 114
Query: 218 AVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQ-----S 272
A++ Y Q +A +F MP+R+ V+W VM + + R A L+D+M +
Sbjct: 115 AMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVA 174
Query: 273 TSNKC--------------------EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
++N E + VT N ++ ++ + E+
Sbjct: 175 STNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK-- 232
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVV------------------------ 348
++ ++ L+ Y+ G ++ A E F P K V+
Sbjct: 233 -TEVSWTSMLLG-YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDL 290
Query: 349 -------SWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEG 401
+W MI G+ EA++ F +MQ+ G+RP + +LS C+ + G
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 402 MSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACR 461
++ +++ ++ + + G L KA V + K D +W +++
Sbjct: 351 RQVHAHLV-RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK-DIIMWNSIISGYA 408
Query: 462 IHGHVTLGERVIERLIELKAQ----EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
HG LGE ++ E+ + + +L S AG E+ E+ M+ K
Sbjct: 409 SHG---LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK-FCV 464
Query: 518 TPGC----CTIELKG 528
TP CT+++ G
Sbjct: 465 TPTVEHYSCTVDMLG 479
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 175/489 (35%), Positives = 263/489 (53%), Gaps = 37/489 (7%)
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRK----------------------------- 228
+Q H +FK G+ + LL + + Y +C +
Sbjct: 50 LQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLM 109
Query: 229 --GDD--ACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTX 284
G+ A KV ++ + WN+MI VRN + +AL M S ++ +P+ +
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD-IKPNKFSF 168
Query: 285 XXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPN 344
L + +H+ +++ G LS++L+ +Y++CG + + EVF
Sbjct: 169 ASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR 228
Query: 345 KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSF 404
V W+AMI+G A +G EAI F EM+ + PD TF G+L+ CSH GL++EG +
Sbjct: 229 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEY 288
Query: 405 FDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHG 464
F M F I P + HYG MVDLLGRAG + +AYE+I +M ++PD IWR+LL + R +
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYK 348
Query: 465 HVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTI 524
+ LGE I+ L + K+ GDYVLL NIYSS WE +VR LM ++ I+ G +
Sbjct: 349 NPELGEIAIQNLSKAKS---GDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWL 405
Query: 525 ELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSY 584
E G++H F D SH IY+ L+ + ++ K G+V + L V ++EK L+Y
Sbjct: 406 EFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNY 465
Query: 585 HSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRG 644
HSEKLA+A+ +L + PGT +R+ N+R+C DCHN++K S + NR +I+RD RFH F
Sbjct: 466 HSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFED 525
Query: 645 GQCSCSDYW 653
G CSC DYW
Sbjct: 526 GLCSCRDYW 534
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRR-RGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNV 204
+N MI Y + ++ L ++M I N S + ++ +C R D+ VH +
Sbjct: 132 WNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLM 191
Query: 205 FKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDAL 264
G + +++L +A++D+Y++C + +VF + + D WN MI+ + +A+
Sbjct: 192 IDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAI 251
Query: 265 SLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLS--NSL 322
+F M+ + PD +T LE G+ +M R + L ++
Sbjct: 252 RVFSEME--AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG-LMSRRFSIQPKLEHYGAM 308
Query: 323 IAMYSRCGCLDKAYEVFMGTP-NKSVVSWSAMIS 355
+ + R G + +AYE+ P VV W +++S
Sbjct: 309 VDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 292/559 (52%), Gaps = 6/559 (1%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+H I+ T V DP V + L G + D + F ++ + V ++ MI +
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF---KVFNEMPKNDVVPWSFMIARFCQ 325
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLL 215
+ + + L+ MR + N + S + C G Q+H V K G D +
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV 385
Query: 216 LTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSN 275
A++D+Y++C K D A K+F E+ ++ V+WN +I A S+F ++ N
Sbjct: 386 SNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR--EALRN 443
Query: 276 KCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKA 335
+ +VT S++ G ++H ++ + +SNSLI MY++CG + A
Sbjct: 444 QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFA 503
Query: 336 YEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHS 395
VF V SW+A+ISG + +G G++A+ + M+ +P+ TF GVLS CS++
Sbjct: 504 QSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNA 563
Query: 396 GLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRT 455
GL+D+G F+ MI + GI P + HY CMV LLGR+G LDKA ++I + +P IWR
Sbjct: 564 GLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRA 623
Query: 456 LLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAI 515
+L A + R E ++++ ++ YVL+ N+Y+ A W VA +R MKE +
Sbjct: 624 MLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGV 683
Query: 516 QTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDD 575
+ PG IE +G VH F V H I L+ +N + AGYV + ++ L +DD
Sbjct: 684 KKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDD 743
Query: 576 KEKGYVLSYHSEKLAIAFGVLATPPG-TTLRVATNVRVCVDCHNFLKLFSGVYNRDVILR 634
+EK L HSE+LA+A+G++ P + + N+R+C DCH+ +K+ S + RD+++R
Sbjct: 744 EEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIR 803
Query: 635 DHKRFHHFRGGQCSCSDYW 653
D RFHHF G CSC D+W
Sbjct: 804 DMNRFHHFHAGVCSCGDHW 822
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 156/340 (45%), Gaps = 20/340 (5%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
F E R VS F T+ + Y+ D + LY + R G NP + +K +
Sbjct: 107 FDEMPERNNVS-FVTLAQGYACQDP----IGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
+H + K G+ S++ + A+++ YS C D A VF+ + +D V W ++SC
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
V N D+L L M+ P++ T + +F + +H I++ Y
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFM--PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
+ L+ +Y++ G + A++VF P VV WS MI+ NG+ EA++ F M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 374 QRIGIRPDDQTFTGVLSACS---HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
+ + P++ T + +L+ C+ SGL ++ ++ + G +I+ ++D+ +
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQ----LHGLVVKVGFDLDIYVSNALIDVYAK 395
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGE 470
+D A ++ ++ K + + W T+ I G+ LGE
Sbjct: 396 CEKMDTAVKLFAELSSKNEVS-WNTV-----IVGYENLGE 429
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 25/273 (9%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSM--SDSPQKGL--YLYRDMRRRGIAANPLSSSFAVK 186
+RR + NR F+ A + SDS GL + Y M RR
Sbjct: 13 TRRLMIRCNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRR-------------- 58
Query: 187 SCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVA 246
CI+ D + +HC++ K G D +++ Y + DA +FDEMP+R+ V+
Sbjct: 59 -CIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVS 117
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
+ + + +D + L+ + ++ P T + E +H+
Sbjct: 118 FVTL----AQGYACQDPIGLYSRLHREGHELNPHVFT--SFLKLFVSLDKAEICPWLHSP 171
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEA 366
I++ GY + +LI YS CG +D A VF G K +V W+ ++S NGY +++
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDS 231
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVD 399
++ M+ G P++ TF L A G D
Sbjct: 232 LKLLSCMRMAGFMPNNYTFDTALKASIGLGAFD 264
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/605 (32%), Positives = 315/605 (52%), Gaps = 54/605 (8%)
Query: 95 QIHAHIVCTTLVHDPA--VSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFN----T 148
++HA + + L P +S A SG + + +++ F++I P+ N T
Sbjct: 27 ELHAVLTTSGLKKAPRSYLSNALFQFYASSGEM---VTAQKLFDEI--PLSEKDNVDWTT 81
Query: 149 MIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDG 208
++ ++S + L+ +MRR+ + + +S C + D+ Q H K G
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMG 141
Query: 209 HQSDSLLLTAVMDLYSQCRKGDDACKVFDE------------------------------ 238
+ + A+MD+Y +C + ++F+E
Sbjct: 142 VLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFH 201
Query: 239 -MPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSL 297
MP+R+ VAW VM++ + TR+ L L M + VT +L
Sbjct: 202 EMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH-GLNFVTLCSMLSACAQSGNL 260
Query: 298 EFGERIHNYIM-------ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
G +H Y + E + + +L+ MY++CG +D + VF ++VV+W
Sbjct: 261 VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTW 320
Query: 351 SAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG 410
+A+ SGLA++G G+ I+ F +M R ++PDD TFT VLSACSHSG+VDEG F +
Sbjct: 321 NALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-R 378
Query: 411 EFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGE 470
+G+ P + HY CMVDLLGRAGL+++A ++ M V P+ + +LLG+C +HG V + E
Sbjct: 379 FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAE 438
Query: 471 RVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVV 530
R+ LI++ +L+ N+Y + G + +R ++++ I+ PG +I + V
Sbjct: 439 RIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSV 498
Query: 531 HEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSEL--HKVDDKEKGYVLSYHSEK 588
H F D SH R EIY L+++ ++++ AGYV ++S + + D +EK L HSEK
Sbjct: 499 HRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEK 558
Query: 589 LAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCS 648
LA+ FG+L T P T L V N+R+C DCH+ +K+ S VY+R++I+RD RFH F+GG CS
Sbjct: 559 LAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCS 618
Query: 649 CSDYW 653
CSDYW
Sbjct: 619 CSDYW 623
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/563 (33%), Positives = 290/563 (51%), Gaps = 14/563 (2%)
Query: 95 QIHAHIVCTTL-VHDPAVSLHFLSRVALSGPLQDPIYSRRFFE-QINRPIVSHFNTMIRA 152
+IH H V + + D V L + G + Y+ R F I R IV+ +N MI
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVS---YAERIFNGMIQRNIVA-WNVMIGC 307
Query: 153 YSMSDSPQKGLYLYRDM-RRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQS 211
Y+ + ++ M + G+ + ++S + + I+ G +H + G
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLP 363
Query: 212 DSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQ 271
+L TA++D+Y +C + A +FD M +++ ++WN +I+ V+N + AL LF +
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
+S PD T SL G IH YI++ Y + NSL+ MY+ CG
Sbjct: 424 DSS--LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 332 LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
L+ A + F K VVSW+++I AV+G+G+ ++ F EM + P+ TF +L+A
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
CS SG+VDEG +F+ M E+GI P I HYGCM+DL+GR G A + M P
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTAR 601
Query: 452 IWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
IW +LL A R H +T+ E E++ +++ G YVLLLN+Y+ AG WE V ++ LM+
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661
Query: 512 EKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELH 571
K I T T+E KG H F D SH +IYE LD +++ + V S L
Sbjct: 662 SKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLR 721
Query: 572 -KVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRD 630
+ K + HS +LA FG+++T G + V N R+C CH FL+ S + R+
Sbjct: 722 PETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRRE 781
Query: 631 VILRDHKRFHHFRGGQCSCSDYW 653
+++ D K FHHF G+CSC +YW
Sbjct: 782 IVVGDSKIFHHFSNGRCSCGNYW 804
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 175/372 (47%), Gaps = 14/372 (3%)
Query: 90 KPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTM 149
KP L + T V+DPA++ L A S ++D + + F+++N+ +N M
Sbjct: 46 KPARLVLRDRYKVTKQVNDPALT-RALRGFADSRLMEDAL---QLFDEMNKADAFLWNVM 101
Query: 150 IRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGH 209
I+ ++ + + Y M G+ A+ + F +KS + G ++H V K G
Sbjct: 102 IKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGF 161
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDV 269
SD + +++ LY + DA KVF+EMP+RD V+WN MIS + +L LF
Sbjct: 162 VSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKE 221
Query: 270 MQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH-NYIMERGYGGAINLSNSLIAMYSR 328
M K PD + S + G+ IH + + R G + + S++ MYS+
Sbjct: 222 MLKCGFK--PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSK 279
Query: 329 CGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM-QRIGIRPDDQTFTG 387
G + A +F G +++V+W+ MI A NG +A F++M ++ G++PD T
Sbjct: 280 YGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSIN 339
Query: 388 VLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVK 447
+L A + + EG + + G P++ ++D+ G G L K+ EVI +
Sbjct: 340 LLPASA----ILEGRTIHGYAMRR-GFLPHMVLETALIDMYGECGQL-KSAEVIFDRMAE 393
Query: 448 PDPTIWRTLLGA 459
+ W +++ A
Sbjct: 394 KNVISWNSIIAA 405
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 3/263 (1%)
Query: 205 FKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDAL 264
+K Q + LT + ++ R +DA ++FDEM + D WNVMI +A+
Sbjct: 56 YKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV 115
Query: 265 SLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIA 324
+ M K D T +SLE G++IH +++ G+ + + NSLI+
Sbjct: 116 QFYSRMVFAGVK--ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLIS 173
Query: 325 MYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQT 384
+Y + GC A +VF P + +VSW++MISG G G ++ F+EM + G +PD +
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 385 FTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM 444
L ACSH G + T ++ ++D+ + G + A + M
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 445 AVKPDPTIWRTLLGACRIHGHVT 467
++ + W ++G +G VT
Sbjct: 294 -IQRNIVAWNVMIGCYARNGRVT 315
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 315 bits (807), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 307/602 (50%), Gaps = 19/602 (3%)
Query: 70 SSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSR-------VALS 122
S F P +K +K+ + H L + T L+H + L F S V
Sbjct: 16 SLFVPQYKNDFFH-LKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISY 74
Query: 123 GPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRR-RGIAANPLSS 181
L++ +R+ F+++ P V + ++I Y+ PQ L +++ M R + N +
Sbjct: 75 VKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTF 134
Query: 182 SFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQ 241
+ K+C + G +H + G + + ++ ++++D+Y +C + A +VFD M
Sbjct: 135 ASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIG 194
Query: 242 --RDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
R+ V+W MI+ +N R +A+ LF + + L++
Sbjct: 195 YGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQW 254
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
G+ H + GY ++ SL+ MY++CG L A ++F+ SV+S+++MI A
Sbjct: 255 GKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAK 314
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
+G G+ A++ F+EM I P+ T GVL ACSHSGLV+EG+ + M ++G+ P+
Sbjct: 315 HGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSR 374
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTMAVKPD--PTIWRTLLGACRIHGHVTLGERVIERLI 477
HY C+VD+LGR G +D+AYE+ T+ V + +W LL A R+HG V + +RLI
Sbjct: 375 HYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLI 434
Query: 478 ELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDD 537
+ Q Y+ L N Y+ +G WE +R MK C IE K V+ F D
Sbjct: 435 QSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGD 494
Query: 538 VSHKRKGEIYETLDDINKQLKIAGY------VVELSSELHKVDDKEKGYVLSYHSEKLAI 591
+S GEI L D+ K++K G+ + SS VD++ K ++S H E+LA+
Sbjct: 495 LSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLAL 554
Query: 592 AFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSD 651
A+G+L P G+T+R+ N+R+C DCH KL S + R++++RD RFH F+ G C+C D
Sbjct: 555 AYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRD 614
Query: 652 YW 653
YW
Sbjct: 615 YW 616
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 298/566 (52%), Gaps = 23/566 (4%)
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYSR--------RFFEQI-NRPIVSHFNTMIRAYSMS 156
+H + + F V + L D +YS+ + F +I +R ++S +N MI + +
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVD-MYSKCGRINEAEKVFRRIVDRSLIS-WNAMIAGFVHA 186
Query: 157 DSPQKGLYLYRDMRRRGIAANP--LSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQ--SD 212
K L + M+ I P + + +K+C I G Q+H + + G S
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 213 SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
+ + +++DLY +C A K FD++ ++ ++W+ +I + +A+ LF +Q
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
++ + D L G+++ ++ G ++ NS++ MY +CG +
Sbjct: 307 LNS--QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
D+A + F K V+SW+ +I+G +G GK+++ F EM R I PD+ + VLSAC
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424
Query: 393 SHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI 452
SHSG++ EG F +++ GI P + HY C+VDLLGRAG L +A +I TM +KP+ I
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Query: 453 WRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKE 512
W+TLL CR+HG + LG+ V + L+ + A+ +YV++ N+Y AG+W + R L
Sbjct: 485 WQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNI 544
Query: 513 KAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIA-GYVVELSSELH 571
K ++ G +E++ VH F + SH I ETL + ++L+ GYV L ELH
Sbjct: 545 KGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELH 604
Query: 572 KVDDKEKGYVLSYHSEKLAIAFGVLAT----PPGTTLRVATNVRVCVDCHNFLKLFSGVY 627
+DD+ K L HSEKLAI LAT G T+RV N+RVCVDCH F+K S +
Sbjct: 605 DIDDESKEENLRAHSEKLAIGL-ALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKIT 663
Query: 628 NRDVILRDHKRFHHFRGGQCSCSDYW 653
++RD RFH F G CSC DYW
Sbjct: 664 KIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 151/289 (52%), Gaps = 6/289 (2%)
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR 256
G QVHC + K G + + ++D+Y +CR+ A KVFD MP+R+ V+W+ ++S V
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
N + +LSLF M P++ T N+LE G +IH + ++ G+ +
Sbjct: 85 NGDLKGSLSLFSEMGRQG--IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
+ NSL+ MYS+CG +++A +VF ++S++SW+AMI+G GYG +A++ F MQ
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 377 GI--RPDDQTFTGVLSACSHSGLVDEGMSFFDRMI-GEFGITPNIHHYGCMVDLLGRAGL 433
I RPD+ T T +L ACS +G++ G ++ F + G +VDL + G
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 434 LDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ 482
L A + + K + W +L+ G + +RL EL +Q
Sbjct: 263 LFSARKAFDQIKEKTMIS-WSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 209/446 (46%), Gaps = 16/446 (3%)
Query: 74 PSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSL---HFLSRVALSGPLQDPIY 130
P+ ++ ++S ++ ++K L + C L ++L ++L + + ++P+
Sbjct: 3 PNQRQNLVSILRVCTRKG-LSDQGGQVHCYLLKSGSGLNLITSNYL--IDMYCKCREPLM 59
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+ + F+ + V ++ ++ + ++ + L L+ +M R+GI N + S +K+C
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
+ G+Q+H K G + + +++D+YS+C + ++A KVF + R ++WN M
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
I+ V AL F +MQ + K PD+ T + G++IH +++
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 311 GYG--GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
G+ + ++ SL+ +Y +CG L A + F K+++SWS++I G A G EA+
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG-EFGITPNIHHYGCMVDL 427
F+ +Q + + D + ++ + L+ +G + G+ ++ + +VD+
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN--SVVDM 357
Query: 428 LGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE-LKAQEAGD 486
+ GL+D+A + M +K D W ++ HG LG++ + E L+ D
Sbjct: 358 YLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHG---LGKKSVRIFYEMLRHNIEPD 413
Query: 487 YVLLLNIYSSAGHWEKVAEVRTLMKE 512
V L + S+ H + E L +
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSK 439
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 296/599 (49%), Gaps = 51/599 (8%)
Query: 62 KRNQPTPISSFPPSHKEQVISTIKSVSQKPHLL---QIHAHIVCTTLVHDPAVSLHFLSR 118
KR Q I+ PS + S +++V++ HL IH +I+ L +D V +
Sbjct: 214 KRMQ---IAGLKPS-TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDM 269
Query: 119 VALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANP 178
+G L Y+R F+ ++ + +N+++ S + + L M + GI
Sbjct: 270 YIKTGYLP---YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGI---- 322
Query: 179 LSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDE 238
+ D++ ++ Y+ K + A V +
Sbjct: 323 -------------------------------KPDAITWNSLASGYATLGKPEKALDVIGK 351
Query: 239 MPQR----DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXX 294
M ++ + V+W + S C +N R+AL +F MQ P+ T
Sbjct: 352 MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG--VGPNAATMSTLLKILGCL 409
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMI 354
+ L G+ +H + + + ++ +L+ MY + G L A E+F G NKS+ SW+ M+
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCML 469
Query: 355 SGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGI 414
G A+ G G+E I AF M G+ PD TFT VLS C +SGLV EG +FD M +GI
Sbjct: 470 MGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGI 529
Query: 415 TPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIE 474
P I H CMVDLLGR+G LD+A++ I TM++KPD TIW L +C+IH + L E +
Sbjct: 530 IPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWK 589
Query: 475 RLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFV 534
RL L+ + +Y++++N+YS+ WE V +R LM+ ++ I++ VH F
Sbjct: 590 RLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFY 649
Query: 535 VDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFG 594
+ +H +G+IY L + ++K +GYV + S + D EK +L H+EKLA+ +G
Sbjct: 650 AEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYG 709
Query: 595 VLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
++ +RV N +C D H K S + NR+++L++ R HHFR G+CSC+D W
Sbjct: 710 LIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 163/365 (44%), Gaps = 49/365 (13%)
Query: 190 RFLDIVGGVQVHCNVFKDG-HQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
RFL G+ +H + K G SD+ +++A M Y +C A K+FDEMP+RD +AWN
Sbjct: 3 RFL----GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWN 58
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
++ +R+ A+ LF MQ + K D T G +IH Y++
Sbjct: 59 EIVMVNLRSGNWEKAVELFREMQFSGAKAY--DSTMVKLLQVCSNKEGFAEGRQIHGYVL 116
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
G +++ NSLI MYSR G L+ + +VF ++++ SW++++S GY +AI
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIG 176
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI------------------- 409
+EM+ G++PD T+ +LS + GL + ++ RM
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 410 --GEFGITPNIHHY-------------GCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
G + IH Y ++D+ + G L A V M K + W
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK-NIVAWN 295
Query: 455 TLLG----ACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLM 510
+L+ AC + L R+ + I+ +A + L + Y++ G EK +V M
Sbjct: 296 SLVSGLSYACLLKDAEALMIRMEKEGIK---PDAITWNSLASGYATLGKPEKALDVIGKM 352
Query: 511 KEKAI 515
KEK +
Sbjct: 353 KEKGV 357
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 153/364 (42%), Gaps = 37/364 (10%)
Query: 130 YSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
++ + F+++ + +N ++ S + +K + L+R+M+ G A + ++ C
Sbjct: 41 FANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCS 100
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
G Q+H V + G +S+ + +++ +YS+ K + + KVF+ M R+ +WN
Sbjct: 101 NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNS 160
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNK--------------------------------- 276
++S + DA+ L D M+ K
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAG 220
Query: 277 CEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAY 336
+P + L+ G+ IH YI+ + + +LI MY + G L A
Sbjct: 221 LKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYAR 280
Query: 337 EVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG 396
VF K++V+W++++SGL+ K+A M++ GI+PD T+ + S + G
Sbjct: 281 MVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG 340
Query: 397 LVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIW 453
++ + +M E G+ PN+ + + + G A +V M V P+
Sbjct: 341 KPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATM 399
Query: 454 RTLL 457
TLL
Sbjct: 400 STLL 403
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/661 (29%), Positives = 316/661 (47%), Gaps = 78/661 (11%)
Query: 65 QPTPISSFPPSHKE------QVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSR 118
+ +P + P+ ++ IS I + L +HA I+ ++ +
Sbjct: 11 KSSPAKIYFPADRQASPDESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAA----QL 66
Query: 119 VALSGPLQDPIYSRRFFE--QINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA 176
V+ S L+ P YS F + P V N +IR + + + + + M R G+
Sbjct: 67 VSCSSLLKSPDYSLSIFRNSEERNPFV--LNALIRGLTENARFESSVRHFILMLRLGVKP 124
Query: 177 NPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVF 236
+ L+ F +KS + G +H K+ DS + +++D+Y++ + A +VF
Sbjct: 125 DRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVF 184
Query: 237 DE-----------------------------------MPQRDTVAWNVMISCCVRNNRTR 261
+E MP+R++ +W+ +I V +
Sbjct: 185 EESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELN 244
Query: 262 DALSLFDVM-----------------------------QSTSNKCEPDDVTXXXXXXXXX 292
A LF++M + +P++ T
Sbjct: 245 RAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACS 304
Query: 293 XXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSA 352
+L G RIH YI++ G + +L+ MY++CG LD A VF +K ++SW+A
Sbjct: 305 KSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTA 364
Query: 353 MISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF 412
MI G AV+G +AI+ F +M G +PD+ F VL+AC +S VD G++FFD M ++
Sbjct: 365 MIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDY 424
Query: 413 GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERV 472
I P + HY +VDLLGRAG L++A+E++ M + PD T W L AC+ H E V
Sbjct: 425 AIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESV 484
Query: 473 IERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHE 532
+ L+EL + G Y+ L ++S G+ + V + R ++++ + + G IEL G +++
Sbjct: 485 SQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNK 544
Query: 533 FVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIA 592
F D SHK EI LD+I GY +H ++++EK V HSEKLA+
Sbjct: 545 FSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALT 604
Query: 593 FGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDY 652
G L T PGTT+R+ N+R+C DCH+ +K S + RD++LRD ++FHHF+ G+CSC DY
Sbjct: 605 LGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDY 664
Query: 653 W 653
W
Sbjct: 665 W 665
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 179/487 (36%), Positives = 264/487 (54%), Gaps = 9/487 (1%)
Query: 75 SHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRF 134
S K Q + +K S HLLQIH I ++L +D + + L RV+ +D ++R
Sbjct: 11 SRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFI-ISELVRVSSLSLAKDLAFARTL 69
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDI 194
+ S +N + R YS SDSP + +++Y +M+RRGI N L+ F +K+C FL +
Sbjct: 70 LLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGL 129
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCC 254
G Q+ V K G D + ++ LY C+K DA KVFDEM +R+ V+WN +++
Sbjct: 130 TAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL 189
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
V N + F M + PD+ T +L G+ +H+ +M R
Sbjct: 190 VENGKLNLVFECFCEM--IGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELEL 245
Query: 315 AINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQ 374
L +L+ MY++ G L+ A VF +K+V +WSAMI GLA G+ +EA++ F +M
Sbjct: 246 NCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMM 305
Query: 375 R-IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL 433
+ +RP+ TF GVL ACSH+GLVD+G +F M I P + HYG MVD+LGRAG
Sbjct: 306 KESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGR 365
Query: 434 LDKAYEVITTMAVKPDPTIWRTLLGACRIH---GHVTLGERVIERLIELKAQEAGDYVLL 490
L++AY+ I M +PD +WRTLL AC IH +GE+V +RLIEL+ + +G+ V++
Sbjct: 366 LNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIV 425
Query: 491 LNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETL 550
N ++ A W + AEVR +MKE ++ G +EL G H F IYE L
Sbjct: 426 ANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELL 485
Query: 551 DDINKQL 557
D QL
Sbjct: 486 DLFKFQL 492
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 167/529 (31%), Positives = 280/529 (52%), Gaps = 6/529 (1%)
Query: 129 IYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
I +RR F++I + + ++I + + + L++ M + + +++
Sbjct: 175 IDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRAS 234
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
I G Q+H K G ++ + ++D+YS+C +DA F+ MP++ TVAWN
Sbjct: 235 AGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWN 294
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+I+ + + +AL L M+ + D T LE ++ H ++
Sbjct: 295 NVIAGYALHGYSEEALCLLYDMRDSG--VSIDQFTLSIMIRISTKLAKLELTKQAHASLI 352
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
G+ I + +L+ YS+ G +D A VF P K+++SW+A++ G A +G G +A++
Sbjct: 353 RNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVK 412
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
FE+M + P+ TF VLSAC++SGL ++G F M GI P HY CM++LL
Sbjct: 413 LFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELL 472
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYV 488
GR GLLD+A I +K +W LL ACR+ ++ LG V E+L + ++ G+YV
Sbjct: 473 GRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYV 532
Query: 489 LLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFV----VDDVSHKRKG 544
++ N+Y+S G + A V ++ K + P C +E+ H F+ D + K
Sbjct: 533 VMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKR 592
Query: 545 EIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTL 604
+IY+ +D++ +++ GY E L VD+KE+ V YHSEKLAIA+G++ TP L
Sbjct: 593 QIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPL 652
Query: 605 RVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
++ N R+C +CH ++ S V R++++RD RFHHF+ G+CSC YW
Sbjct: 653 QITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 211/464 (45%), Gaps = 43/464 (9%)
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
V++CIR I +V+ + +G + + ++ ++ ++ +C DA ++FDE+P+R+
Sbjct: 130 VEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNL 189
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
++ +IS V +A LF +M + CE T S+ G+++H
Sbjct: 190 YSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETH--TFAVMLRASAGLGSIYVGKQLH 247
Query: 305 NYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGK 364
++ G +S LI MYS+CG ++ A F P K+ V+W+ +I+G A++GY +
Sbjct: 248 VCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSE 307
Query: 365 EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCM 424
EA+ +M+ G+ D T + ++ + ++ +I G I +
Sbjct: 308 EALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN-GFESEIVANTAL 366
Query: 425 VDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEA 484
VD + G +D A V + K + W L+G HG T ++ E++I A A
Sbjct: 367 VDFYSKWGRVDTARYVFDKLPRK-NIISWNALMGGYANHGRGTDAVKLFEKMI--AANVA 423
Query: 485 GDYVLLLNIYSSAGH-------WE---KVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFV 534
++V L + S+ + WE ++EV + K +A+ C IEL G + +
Sbjct: 424 PNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGI-KPRAMHYA---CMIELLG--RDGL 477
Query: 535 VDD-VSHKRKGEIYETLD---------DINKQLKIAGYVVELSSELHKVDDKEKG-YVLS 583
+D+ ++ R+ + T++ + + L++ V E +L+ + ++ G YV+
Sbjct: 478 LDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAE---KLYGMGPEKLGNYVVM 534
Query: 584 YH----SEKLAIAFGVLATPPGTTLRV---ATNVRVCVDCHNFL 620
Y+ K A A GVL T L + T V V H+FL
Sbjct: 535 YNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFL 578
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 172/501 (34%), Positives = 269/501 (53%), Gaps = 73/501 (14%)
Query: 93 LLQIHAHIVCTTLVHDPAVSLHFLSRVALS--GPLQDPIYSRRFFEQINRPIVSHFNTMI 150
L QIHA +V L+ + +V + +LS G L+ Y+ + F++I +P VS N ++
Sbjct: 28 LKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALK---YAHKLFDEIPKPDVSICNHVL 84
Query: 151 RAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC---------------------- 188
R + S P+K + LY +M +RG++ + + +F +K+C
Sbjct: 85 RGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV 144
Query: 189 ---------IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM 239
I F G + + +F D ++ + +++ Y++ K D+A ++FDEM
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFD-----------VMQSTSNKC----------- 277
P +D VAWNVMI+ C++ A LFD M S C
Sbjct: 205 PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFK 264
Query: 278 -------EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG------YGGAINLSNSLIA 324
PD VT LE G+R+H YI+E Y G + N+LI
Sbjct: 265 EMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT-PIWNALID 323
Query: 325 MYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQT 384
MY++CG +D+A EVF G ++ + +W+ +I GLA++ + + +IE FEEMQR+ + P++ T
Sbjct: 324 MYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVT 382
Query: 385 FTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM 444
F GV+ ACSHSG VDEG +F M + I PNI HYGCMVD+LGRAG L++A+ + +M
Sbjct: 383 FIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM 442
Query: 445 AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVA 504
++P+ +WRTLLGAC+I+G+V LG+ E+L+ ++ E+GDYVLL NIY+S G W+ V
Sbjct: 443 KIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQ 502
Query: 505 EVRTLMKEKAIQTTPGCCTIE 525
+VR + + ++ G IE
Sbjct: 503 KVRKMFDDTRVKKPTGVSLIE 523
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 265/502 (52%), Gaps = 41/502 (8%)
Query: 93 LLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRA 152
L Q H +++ T L D F+ + +G L+ Y+ F P NTMIRA
Sbjct: 31 LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLR---YAYSVFTHQPCPNTYLHNTMIRA 87
Query: 153 YSMSDSPQK---GLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGH 209
S+ D P + +YR + + + F +K +R D+ G Q+H V G
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV-------------------M 250
S ++T ++ +Y C DA K+FDEM +D WN M
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 251 ISCCVRN--------------NRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNS 296
+ C VRN R +A+ +F M EPD+VT S
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM--LMENVEPDEVTLLAVLSACADLGS 265
Query: 297 LEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISG 356
LE GERI +Y+ RG A++L+N++I MY++ G + KA +VF ++VV+W+ +I+G
Sbjct: 266 LELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG 325
Query: 357 LAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITP 416
LA +G+G EA+ F M + G+RP+D TF +LSACSH G VD G F+ M ++GI P
Sbjct: 326 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 385
Query: 417 NIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERL 476
NI HYGCM+DLLGRAG L +A EVI +M K + IW +LL A +H + LGER + L
Sbjct: 386 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSEL 445
Query: 477 IELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVD 536
I+L+ +G+Y+LL N+YS+ G W++ +R +MK ++ G +IE++ V++F+
Sbjct: 446 IKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISG 505
Query: 537 DVSHKRKGEIYETLDDINKQLK 558
D++H + I+E L +++ Q++
Sbjct: 506 DLTHPQVERIHEILQEMDLQIQ 527
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 274/531 (51%), Gaps = 41/531 (7%)
Query: 59 PHHKRNQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSR 118
P R P ++ S ++ +IS ++S H+ IHA I+ T D V
Sbjct: 12 PSTFRRDPDS-NTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFEL--- 67
Query: 119 VALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANP 178
+ + L Y+ F ++ P V + MI + S G+ LY M I +
Sbjct: 68 IRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRM----IHNSV 123
Query: 179 LSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDE 238
L ++ + S ++ D+ ++H V K G S + +M++Y + + +A K+FDE
Sbjct: 124 LPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDE 183
Query: 239 MPQRDTVAWNVMISC-------------------------------CVRNNRTRDALSLF 267
MP RD VA VMI+C VRN AL LF
Sbjct: 184 MPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELF 243
Query: 268 DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYS 327
MQ + ++ T +LE G +H+++ + + + N+LI MYS
Sbjct: 244 REMQMEN--VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYS 301
Query: 328 RCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTG 387
RCG +++A VF +K V+S++ MISGLA++G EAI F +M G RP+ T
Sbjct: 302 RCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVA 361
Query: 388 VLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVK 447
+L+ACSH GL+D G+ F+ M F + P I HYGC+VDLLGR G L++AY I + ++
Sbjct: 362 LLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIE 421
Query: 448 PDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVR 507
PD + TLL AC+IHG++ LGE++ +RL E + ++G YVLL N+Y+S+G W++ E+R
Sbjct: 422 PDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIR 481
Query: 508 TLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLK 558
M++ I+ PGC TIE+ +HEF+V D++H K IY+ L ++N+ L+
Sbjct: 482 ESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 265/497 (53%), Gaps = 35/497 (7%)
Query: 81 ISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSR-VALSGPLQDPIYSRRFFEQIN 139
I ++ V + +I+A I+ +H + S +++ V ++D Y+ R F Q++
Sbjct: 14 IPFLQRVKSRNEWKKINASII----IHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVS 69
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA-NPLSSSFAVKSCIRFLDIVGGV 198
P V +N++IRAY+ + + +Y+ + R+ + + F KSC G
Sbjct: 70 NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGK 129
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNN 258
QVH ++ K G + + A++D+Y + DA KVFDEM +RD ++WN ++S R
Sbjct: 130 QVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLG 189
Query: 259 RTRDALSLFDVMQS-------------TSNKC----------------EPDDVTXXXXXX 289
+ + A LF +M T C EPD+++
Sbjct: 190 QMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 290 XXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVS 349
SLE G+ IH Y RG+ + N+LI MYS+CG + +A ++F K V+S
Sbjct: 250 SCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVIS 309
Query: 350 WSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI 409
WS MISG A +G AIE F EMQR ++P+ TF G+LSACSH G+ EG+ +FD M
Sbjct: 310 WSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMR 369
Query: 410 GEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLG 469
++ I P I HYGC++D+L RAG L++A E+ TM +KPD IW +LL +CR G++ +
Sbjct: 370 QDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVA 429
Query: 470 ERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGV 529
++ L+EL+ ++ G+YVLL NIY+ G WE V+ +R +++ + ++ TPG IE+ +
Sbjct: 430 LVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNI 489
Query: 530 VHEFVVDDVSHKRKGEI 546
V EFV D S EI
Sbjct: 490 VQEFVSGDNSKPFWTEI 506
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 271/513 (52%), Gaps = 14/513 (2%)
Query: 60 HHKRNQPTPIS-SFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSR 118
H +RN P +FPP K + K P Q HAHIV L DP V +S
Sbjct: 94 HMRRNGVIPSRHTFPPLLK----AVFKLRDSNP--FQFHAHIVKFGLDSDPFVRNSLISG 147
Query: 119 VALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANP 178
+ SG ++ R F+ V + MI + + S + + + +M++ G+AAN
Sbjct: 148 YSSSGLFD---FASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANE 204
Query: 179 LSSSFAVKSCIRFLDIVGGVQVHCNVFKDGH-QSDSLLLTAVMDLYSQCRKGDDACKVFD 237
++ +K+ + D+ G VH + G + D + ++++D+Y +C DDA KVFD
Sbjct: 205 MTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFD 264
Query: 238 EMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSL 297
EMP R+ V W +I+ V++ + +F+ M + P++ T +L
Sbjct: 265 EMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD--VAPNEKTLSSVLSACAHVGAL 322
Query: 298 EFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGL 357
G R+H Y+++ +LI +Y +CGCL++A VF K+V +W+AMI+G
Sbjct: 323 HRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGF 382
Query: 358 AVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPN 417
A +GY ++A + F M + P++ TF VLSAC+H GLV+EG F M G F + P
Sbjct: 383 AAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPK 442
Query: 418 IHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLI 477
HY CMVDL GR GLL++A +I M ++P +W L G+C +H LG+ R+I
Sbjct: 443 ADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVI 502
Query: 478 ELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVV-D 536
+L+ +G Y LL N+YS + +W++VA VR MK++ + +PG IE+KG + EF+ D
Sbjct: 503 KLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFD 562
Query: 537 DVSHKRKGEIYETLDDINKQLKIAGYVVELSSE 569
D ++Y+TLD + Q+++ + ++++E
Sbjct: 563 DKKPLESDDLYKTLDTVGVQMRLPDELEDVTAE 595
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 272/517 (52%), Gaps = 43/517 (8%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
V+S ++ +Q+H+ I + + D + + + G + D ++R F+++
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND---AQRVFDEMG 214
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
V +N++I + + + L +++ M + + ++ + + +C I G +
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 200 VHCNVFK-DGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP------------------ 240
VH V K D ++D +L A +D+Y++C + +A +FD MP
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 241 -------------QRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXX 287
+R+ V+WN +I+ +N +ALSLF +++ S C P +
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES-VC-PTHYSFANI 392
Query: 288 XXXXXXXNSLEFGERIHNYIMERGYG------GAINLSNSLIAMYSRCGCLDKAYEVFMG 341
L G + H ++++ G+ I + NSLI MY +CGC+++ Y VF
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 342 TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEG 401
+ VSW+AMI G A NGYG EA+E F EM G +PD T GVLSAC H+G V+EG
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 402 MSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACR 461
+F M +FG+ P HY CMVDLLGRAG L++A +I M ++PD IW +LL AC+
Sbjct: 513 RHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACK 572
Query: 462 IHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGC 521
+H ++TLG+ V E+L+E++ +G YVLL N+Y+ G WE V VR M+++ + PGC
Sbjct: 573 VHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGC 632
Query: 522 CTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLK 558
I+++G H F+V D SH RK +I+ LD + +++
Sbjct: 633 SWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 189/400 (47%), Gaps = 44/400 (11%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+N+M+ ++ D ++ L + M + G N S + + +C D+ GVQVH +
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALS 265
K SD + +A++D+YS+C +DA +VFDEM R+ V+WN +I+C +N +AL
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 266 LFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG-YGGAINLSNSLIA 324
+F +M ++ EPD+VT ++++ G+ +H +++ I LSN+ +
Sbjct: 240 VFQMM--LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 325 MYSRCGCLDKAYEVFMGTP-------------------------------NKSVVSWSAM 353
MY++C + +A +F P ++VVSW+A+
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 354 ISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG--- 410
I+G NG +EA+ F ++R + P +F +L AC+ + GM ++
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 411 --EFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTL 468
+ G +I ++D+ + G +++ Y V M ++ D W ++ +G+
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGY--- 473
Query: 469 GERVIERLIE-LKAQEAGDYVLLLNIYSSAGHWEKVAEVR 507
G +E E L++ E D++ ++ + S+ GH V E R
Sbjct: 474 GNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 164/373 (43%), Gaps = 40/373 (10%)
Query: 180 SSSFA--VKSCIRF-LDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVF 236
SS FA + SCI+ L + VH +V K G ++ + ++D YS+C +D +VF
Sbjct: 19 SSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 237 DEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM----QSTSN----------KCEP--- 279
D+MPQR+ WN +++ + +A SLF M Q T N +CE
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 280 ------------DDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYS 327
++ + N + G ++H+ I + + + + ++L+ MYS
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 198
Query: 328 RCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTG 387
+CG ++ A VF +++VVSW+++I+ NG EA++ F+ M + PD+ T
Sbjct: 199 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 258
Query: 388 VLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVK 447
V+SAC+ + G R++ + +I VD+ + + +A + +M ++
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 448 PDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG--DYVLLLNIYSSAGHWEKVAE 505
+ I G+ RL+ K E + L+ Y+ G E+
Sbjct: 319 ------NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 506 VRTLMKEKAIQTT 518
+ L+K +++ T
Sbjct: 373 LFCLLKRESVCPT 385
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 269/499 (53%), Gaps = 45/499 (9%)
Query: 92 HLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFF-EQINRPIVSHFNTMI 150
H+L++ +V + VH+ ++ + A G +++ +R+ F E R +VS +N +I
Sbjct: 181 HVLKLRLELV--SHVHNASIHM-----FASCGDMEN---ARKVFDESPVRDLVS-WNCLI 229
Query: 151 RAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQ 210
Y +K +Y+Y+ M G+ + ++ V SC D+ G + + V ++G +
Sbjct: 230 NGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 211 SDSLLLTAVMDLYSQC-----------------------------RKG--DDACKVFDEM 239
L+ A+MD++S+C R G D + K+FD+M
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
++D V WN MI V+ R +DAL+LF MQ+++ K PD++T +L+
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK--PDEITMIHCLSACSQLGALDV 407
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
G IH YI + + L SL+ MY++CG + +A VF G ++ ++++A+I GLA+
Sbjct: 408 GIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLAL 467
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
+G AI F EM GI PD+ TF G+LSAC H G++ G +F +M F + P +
Sbjct: 468 HGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLK 527
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
HY MVDLLGRAGLL++A ++ +M ++ D +W LL CR+HG+V LGE+ ++L+EL
Sbjct: 528 HYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLEL 587
Query: 480 KAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVS 539
++G YVLL +Y A WE R +M E+ ++ PGC +IE+ G+V EF+V D S
Sbjct: 588 DPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKS 647
Query: 540 HKRKGEIYETLDDINKQLK 558
+IY+ L + + ++
Sbjct: 648 RPESEKIYDRLHCLGRHMR 666
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 214/476 (44%), Gaps = 41/476 (8%)
Query: 58 IPHHKRNQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLS 117
+PHH+ S+ ++S ++ HL QI A ++ L+ DP S ++
Sbjct: 34 LPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIA 93
Query: 118 RVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIA-A 176
ALS + YS + + I P + +N IR +S S++P++ LY+ M R G +
Sbjct: 94 FCALSES-RYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCES 152
Query: 177 NPLSSSFAV--KSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACK 234
P ++ V K C G + +V K + S + A + +++ C ++A K
Sbjct: 153 RPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARK 212
Query: 235 VFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXX 294
VFDE P RD V+WN +I+ + A+ ++ +M+S K PDDVT
Sbjct: 213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK--PDDVTMIGLVSSCSML 270
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMI 354
L G+ + Y+ E G I L N+L+ M+S+CG + +A +F +++VSW+ MI
Sbjct: 271 GDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330
Query: 355 SGLAVNGY-------------------------------GKEAIEAFEEMQRIGIRPDDQ 383
SG A G G++A+ F+EMQ +PD+
Sbjct: 331 SGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEI 390
Query: 384 TFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITT 443
T LSACS G +D G+ + R I ++ ++ N+ +VD+ + G + +A V
Sbjct: 391 TMIHCLSACSQLGALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHG 449
Query: 444 MAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGH 499
+ + T + ++G +HG + +I+ A A D + + + S+ H
Sbjct: 450 IQTRNSLT-YTAIIGGLALHGDASTAISYFNEMID--AGIAPDEITFIGLLSACCH 502
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/549 (30%), Positives = 275/549 (50%), Gaps = 49/549 (8%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
V++ SVS +Q+H IV + + V + A ++ +R E +
Sbjct: 233 VLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMES---ARALLEGME 289
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLY-----RDMRRRGIAANPLSSSFAVKSCIRFLDI 194
V +N+MI + L ++ RDM+ + + FA+ ++
Sbjct: 290 VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRT----EM 345
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCC 254
HC + K G+ + L+ A++D+Y++ D A KVF+ M ++D ++W +++
Sbjct: 346 KIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGN 405
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
N +AL LF M+ PD + LEFG+++H ++ G+
Sbjct: 406 THNGSYDEALKLFCNMRVGG--ITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPS 463
Query: 315 AINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQ 374
+++++NSL+ MY++CG L+ A +F + +++W+ +I G A NG
Sbjct: 464 SLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG------------- 510
Query: 375 RIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLL 434
L+++ +FD M +GITP HY CM+DL GR+G
Sbjct: 511 ----------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDF 548
Query: 435 DKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIY 494
K +++ M V+PD T+W+ +L A R HG++ GER + L+EL+ A YV L N+Y
Sbjct: 549 VKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMY 608
Query: 495 SSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDIN 554
S+AG ++ A VR LMK + I PGC +E KG VH F+ +D H R EIY +D++
Sbjct: 609 SAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMM 668
Query: 555 KQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCV 614
+K AGY ++S LH +D + K L+YHSEKLA+AFG+L P G +R+ N+RVC
Sbjct: 669 LLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCG 728
Query: 615 DCHNFLKLF 623
DCH+ +KL
Sbjct: 729 DCHSAMKLL 737
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 192/415 (46%), Gaps = 9/415 (2%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
QIH H + T D V L+ A + + Y E + + +M+ YS
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVT--WTSMLTGYS 203
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ K + +RD+RR G +N + + +C GVQVHC + K G +++
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ +A++D+Y++CR+ + A + + M D V+WN MI CVR +ALS+F M
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Query: 275 NKCEPDDVTX-XXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
K DD T ++ H I++ GY ++N+L+ MY++ G +D
Sbjct: 324 MKI--DDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMD 381
Query: 334 KAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
A +VF G K V+SW+A+++G NG EA++ F M+ GI PD VLSA +
Sbjct: 382 SALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASA 441
Query: 394 HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIW 453
L++ G I + G ++ +V + + G L+ A + +M ++ D W
Sbjct: 442 ELTLLEFGQQVHGNYI-KSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR-DLITW 499
Query: 454 RTLLGACRIHGHVTLGERVIERLIELKAQEAG--DYVLLLNIYSSAGHWEKVAEV 506
L+ +G + +R + + + G Y +++++ +G + KV ++
Sbjct: 500 TCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQL 554
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 133/266 (50%), Gaps = 9/266 (3%)
Query: 204 VFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDA 263
+F + D ++ YS R+ DA K+F P ++T++WN +IS ++ +A
Sbjct: 50 MFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEA 109
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLI 323
+LF MQS K P++ T L GE+IH + ++ G+ +N+ N L+
Sbjct: 110 FNLFWEMQSDGIK--PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLL 167
Query: 324 AMYSRCGCLDKA---YEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRP 380
AMY++C + +A +E G N V+W++M++G + NG+ +AIE F +++R G +
Sbjct: 168 AMYAQCKRISEAEYLFETMEGEKNN--VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQS 225
Query: 381 DDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEV 440
+ TF VL+AC+ G+ ++ + G NI+ ++D+ + ++ A +
Sbjct: 226 NQYTFPSVLTACASVSACRVGVQVHCCIV-KSGFKTNIYVQSALIDMYAKCREMESARAL 284
Query: 441 ITTMAVKPDPTIWRTLLGACRIHGHV 466
+ M V D W +++ C G +
Sbjct: 285 LEGMEV-DDVVSWNSMIVGCVRQGLI 309
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 144/313 (46%), Gaps = 4/313 (1%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+N +I Y S S + L+ +M+ GI N + ++ C + ++ G Q+H +
Sbjct: 93 WNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTI 152
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP-QRDTVAWNVMISCCVRNNRTRDAL 264
K G D ++ ++ +Y+QC++ +A +F+ M +++ V W M++ +N A+
Sbjct: 153 KTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAI 212
Query: 265 SLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIA 324
F ++ N + + T ++ G ++H I++ G+ I + ++LI
Sbjct: 213 ECFRDLRREGN--QSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALID 270
Query: 325 MYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQT 384
MY++C ++ A + G VVSW++MI G G EA+ F M ++ DD T
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 385 FTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM 444
+L+ + S + S +I + G +VD+ + G++D A +V M
Sbjct: 331 IPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM 390
Query: 445 AVKPDPTIWRTLL 457
++ D W L+
Sbjct: 391 -IEKDVISWTALV 402
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 254/500 (50%), Gaps = 37/500 (7%)
Query: 88 SQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFN 147
S L QIHA ++ T L+ D + L+ S D Y+ F +IN +N
Sbjct: 36 STMRELKQIHASLIKTGLISDTVTASRVLAFCCASP--SDMNYAYLVFTRINHKNPFVWN 93
Query: 148 TMIRAYSMSDSPQKGLYLYRDMRRRGIAANP--LSSSFAVKSCIRFLDIVGGVQVHCNVF 205
T+IR +S S P+ + ++ DM + P L+ K+ R G Q+H V
Sbjct: 94 TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 153
Query: 206 KDGHQSDSLLLTAVMDLY-------------------------------SQCRKGDDACK 234
K+G + DS + ++ +Y ++C D A
Sbjct: 154 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQN 213
Query: 235 VFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXX 294
+FDEMPQR+ V+WN MIS VRN R +DAL +F MQ K PD T
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK--PDGFTMVSLLNACAYL 271
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMI 354
+ E G IH YI+ + + +LI MY +CGC+++ VF P K + W++MI
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 355 SGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGI 414
GLA NG+ + A++ F E++R G+ PD +F GVL+AC+HSG V FF M ++ I
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 415 TPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIE 474
P+I HY MV++LG AGLL++A +I M V+ D IW +LL ACR G+V + +R +
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451
Query: 475 RLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFV 534
L +L E YVLL N Y+S G +E+ E R LMKE+ ++ GC +IE+ VHEF+
Sbjct: 452 CLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFI 511
Query: 535 VDDVSHKRKGEIYETLDDIN 554
+H + EIY LD +N
Sbjct: 512 SCGGTHPKSAEIYSLLDILN 531
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 164/387 (42%), Gaps = 58/387 (14%)
Query: 174 IAANPLSSSFAVKSCIRFLDIVGGV-----QVHCNVFKDGHQSDSLLLTAVMDLYSQCRK 228
+ A P S S + + +R +D Q+H ++ K G SD++ + V+ C
Sbjct: 13 VPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFC--CAS 70
Query: 229 GDD---ACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXX 285
D A VF + ++ WN +I R++ A+S+F M +S +P +T
Sbjct: 71 PSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYP 130
Query: 286 XXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMG---- 341
G ++H +++ G + N+++ MY CGCL +A+ +F+G
Sbjct: 131 SVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF 190
Query: 342 ---------------------------TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQ 374
P ++ VSW++MISG NG K+A++ F EMQ
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 375 RIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYG----CMVDLLGR 430
++PD T +L+AC++ G ++G R I E+ + ++D+ +
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQG-----RWIHEYIVRNRFELNSIVVTALIDMYCK 305
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ----EAGD 486
G +++ V A K + W +++ +G ER ++ EL+ ++
Sbjct: 306 CGCIEEGLNVFEC-APKKQLSCWNSMILGLANNG---FEERAMDLFSELERSGLEPDSVS 361
Query: 487 YVLLLNIYSSAGHWEKVAEVRTLMKEK 513
++ +L + +G + E LMKEK
Sbjct: 362 FIGVLTACAHSGEVHRADEFFRLMKEK 388
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 262/512 (51%), Gaps = 36/512 (7%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
++H H+V L + V + +L G + +R F++ + V +N MI Y+
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMD---MARGVFDRRCKEDVFSWNLMISGYN 212
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
++ + L +M R ++ ++ + +C + D +VH V + +
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 215 LLTAVMDLYSQCRKGDDACKVF-------------------------------DEMPQRD 243
L A+++ Y+ C + D A ++F D+MP RD
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 244 TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERI 303
++W +MI +R ++L +F MQS PD+ T SLE GE I
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAG--MIPDEFTMVSVLTACAHLGSLEIGEWI 390
Query: 304 HNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYG 363
YI + + + N+LI MY +CGC +KA +VF + +W+AM+ GLA NG G
Sbjct: 391 KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGC 423
+EAI+ F +MQ + I+PDD T+ GVLSAC+HSG+VD+ FF +M + I P++ HYGC
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGC 510
Query: 424 MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQE 483
MVD+LGRAGL+ +AYE++ M + P+ +W LLGA R+H + E ++++EL+
Sbjct: 511 MVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDN 570
Query: 484 AGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRK 543
Y LL NIY+ W+ + EVR + + AI+ TPG IE+ G HEFV D SH +
Sbjct: 571 GAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQS 630
Query: 544 GEIYETLDDINKQLKIAGYVVELSSELHKVDD 575
EIY L+++ ++ A Y+ + S L + D
Sbjct: 631 EEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 183/412 (44%), Gaps = 38/412 (9%)
Query: 130 YSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
Y+ + F +I P V +N MI+ +S D +G+ LY +M + G+ + + F +
Sbjct: 86 YAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLK 145
Query: 190 RFLDIVG-GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
R + G ++HC+V K G S+ + A++ +YS C D A VFD + D +WN
Sbjct: 146 RDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWN 205
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+MIS R +++ L M+ N P VT + +R+H Y+
Sbjct: 206 LMISGYNRMKEYEESIELLVEME--RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISG------------ 356
E ++ L N+L+ Y+ CG +D A +F + V+SW++++ G
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 357 --------------LAVNGYGK-----EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGL 397
+ ++GY + E++E F EMQ G+ PD+ T VL+AC+H G
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 398 VDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
++ G + I + I ++ ++D+ + G +KA +V M + D W ++
Sbjct: 384 LEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMV 441
Query: 458 GACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTL 509
+G +V ++ ++ Q D + L + S+ H V + R
Sbjct: 442 VGLANNGQGQEAIKVFFQMQDMSIQP--DDITYLGVLSACNHSGMVDQARKF 491
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 6/182 (3%)
Query: 301 ERIHNYIMERGYGGAINLSNSLIAMY-SRCGC-LDKAYEVFMGTPNKSVVSWSAMISGLA 358
+++H+ + RG L + SR G + AY++F+ P VV W+ MI G +
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 359 VNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNI 418
E + + M + G+ PD TF +L+ G + +FG+ N+
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNL 170
Query: 419 HHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE 478
+ +V + GL+D A V K D W ++ + + E IE L+E
Sbjct: 171 YVQNALVKMYSLCGLMDMARGVFDRRC-KEDVFSWNLMISG---YNRMKEYEESIELLVE 226
Query: 479 LK 480
++
Sbjct: 227 ME 228
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 282 bits (721), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 263/499 (52%), Gaps = 13/499 (2%)
Query: 67 TPISSFPPSHKEQVISTIKSVSQKPHLL----QIHAHIVCTTLVHDPAVSLHFLSRVALS 122
T +S F S+I + H L Q+HA+ + L +D V+ + A
Sbjct: 339 TSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398
Query: 123 GPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSP---QKGLYLYRDMRRRGIAANPL 179
L D +R+ F+ V FN MI YS + + L ++RDMR R I + L
Sbjct: 399 DCLTD---ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLL 455
Query: 180 SSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM 239
+ +++ + Q+H +FK G D +A++D+YS C D+ VFDEM
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
+D V WN M + V+ + +AL+LF +Q + + PD+ T S++
Sbjct: 516 KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER--PDEFTFANMVTAAGNLASVQL 573
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
G+ H +++RG ++N+L+ MY++CG + A++ F ++ VV W+++IS A
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYAN 633
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
+G GK+A++ E+M GI P+ TF GVLSACSH+GLV++G+ F+ M+ FGI P
Sbjct: 634 HGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETE 692
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
HY CMV LLGRAG L+KA E+I M KP +WR+LL C G+V L E E I
Sbjct: 693 HYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILS 752
Query: 480 KAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVS 539
+++G + +L NIY+S G W + +VR MK + + PG I + VH F+ D S
Sbjct: 753 DPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKS 812
Query: 540 HKRKGEIYETLDDINKQLK 558
H + +IYE LDD+ Q++
Sbjct: 813 HCKANQIYEVLDDLLVQIR 831
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+H I+ L D +S ++ + +G + +Y+R+ FE++ + ++TM+ A +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGM---VYARKVFEKMPERNLVSWSTMVSACNH 122
Query: 156 SDSPQKGLYLYRDM-RRRGIAANPLSSSFAVKSCIRFLDIVGG---VQVHCNVFKDGHQS 211
++ L ++ + R R + N S +++C LD G Q+ + K G
Sbjct: 123 HGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC-SGLDGRGRWMVFQLQSFLVKSGFDR 181
Query: 212 DSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQ 271
D + T ++D Y + D A VFD +P++ TV W MIS CV+ R+ +L LF Q
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF--YQ 239
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
+ PD LE G++IH +I+ G +L N LI Y +CG
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 332 LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
+ A+++F G PNK+++SW+ ++SG N KEA+E F M + G++PD + +L++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 392 CS 393
C+
Sbjct: 360 CA 361
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 186/409 (45%), Gaps = 14/409 (3%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQI-NRPIVSHFNTMIRAY 153
QIHAHI+ L D ++ + G + I + + F + N+ I+S + T++ Y
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRV---IAAHKLFNGMPNKNIIS-WTTLLSGY 325
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDS 213
+ ++ + L+ M + G+ + + S + SC + G QVH K +DS
Sbjct: 326 KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDS 385
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR---NNRTRDALSLFDVM 270
+ +++D+Y++C DA KVFD D V +N MI R +AL++F M
Sbjct: 386 YVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG 330
+ P +T SL ++IH + + G I ++LI +YS C
Sbjct: 446 R--FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLS 390
CL + VF K +V W++M +G +EA+ F E+Q RPD+ TF +++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 391 ACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDP 450
A + V G F +++ G+ N + ++D+ + G + A++ + A + D
Sbjct: 564 AAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR-DV 621
Query: 451 TIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGH 499
W +++ + HG +++E+++ + +Y+ + + S+ H
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEP--NYITFVGVLSACSH 668
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 297 LEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISG 356
L + +H I+ G LSN LI +YSR G + A +VF P +++VSWS M+S
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 357 LAVNGYGKEAIEAFEEMQRI-GIRPDDQTFTGVLSACSHSGLVDEG--MSF-FDRMIGEF 412
+G +E++ F E R P++ + + AC SGL G M F + +
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKS 177
Query: 413 GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERV 472
G +++ ++D + G +D A V + K T W T++ C G + ++
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVT-WTTMISGCVKMGRSYVSLQL 236
Query: 473 IERLIE 478
+L+E
Sbjct: 237 FYQLME 242
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 256/464 (55%), Gaps = 6/464 (1%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
QIH + + L + A G L +RR F+QI RP + +N +I +
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNS---ARRVFDQIERPDTASWNVIIAGLA 347
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ + + ++ MR G + +S + + + + + G+Q+H + K G +D
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT 407
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQR-DTVAWNVMISCCVRNNRTRDALSLFDVMQST 273
+ +++ +Y+ C +F++ D+V+WN +++ C+++ + + L LF +M
Sbjct: 408 VCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLM--L 465
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
++CEPD +T +SL+ G ++H Y ++ G + N LI MY++CG L
Sbjct: 466 VSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLG 525
Query: 334 KAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
+A +F N+ VVSWS +I G A +G+G+EA+ F+EM+ GI P+ TF GVL+ACS
Sbjct: 526 QARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACS 585
Query: 394 HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIW 453
H GLV+EG+ + M E GI+P H C+VDLL RAG L++A I M ++PD +W
Sbjct: 586 HVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVW 645
Query: 454 RTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEK 513
+TLL AC+ G+V L ++ E ++++ + +VLL ++++S+G+WE A +R+ MK+
Sbjct: 646 KTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKH 705
Query: 514 AIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQL 557
++ PG IE++ +H F +D+ H + +IY L +I Q+
Sbjct: 706 DVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 167/386 (43%), Gaps = 8/386 (2%)
Query: 81 ISTIKSVSQKPHLLQ---IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQ 137
IS I + S L Q IH HI+ + +D ++ H LS G L+D +R F+
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD---AREVFDF 127
Query: 138 INRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGG 197
+ + + ++I YS + + + LY M + + + + +K+C D+ G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRN 257
Q+H V K S + A++ +Y + + DA +VF +P +D ++W+ +I+ +
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 258 NRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAIN 317
+ALS M S P++ ++G +IH ++ G
Sbjct: 248 GFEFEALSHLKEMLSF-GVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 318 LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
SL MY+RCG L+ A VF SW+ +I+GLA NGY EA+ F +M+ G
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA 437
PD + +L A + + +GM +I ++G ++ ++ + L
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYII-KWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 438 YEVITTMAVKPDPTIWRTLLGACRIH 463
+ + D W T+L AC H
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQH 451
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
N I+ ++N R+AL FD Q S+ + T SL G +IH++I
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSS-FKIRLRTYISLICACSSSRSLAQGRKIHDHI 93
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
+ L+N +++MY +CG L A EVF P +++VS++++I+G + NG G EAI
Sbjct: 94 LNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAI 153
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI 409
+ +M + + PD F ++ AC+ S V G ++I
Sbjct: 154 RLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/383 (39%), Positives = 223/383 (58%), Gaps = 4/383 (1%)
Query: 169 MRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRK 228
++R G + + S AV+SC D G HC K G SD L ++++ LY +
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 229 GDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXX 288
++A KVF+EMP+R+ V+W MIS + R L L+ M+ +++ +P+D T
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS--DPNDYTFTALL 228
Query: 289 XXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVV 348
+L G +H + G +++SNSLI+MY +CG L A+ +F NK VV
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 349 SWSAMISGLAVNGYGKEAIEAFEEMQ-RIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDR 407
SW++MI+G A +G +AIE FE M + G +PD T+ GVLS+C H+GLV EG FF+
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN- 347
Query: 408 MIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVT 467
++ E G+ P ++HY C+VDLLGR GLL +A E+I M +KP+ IW +LL +CR+HG V
Sbjct: 348 LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVW 407
Query: 468 LGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELK 527
G R E + L+ A +V L N+Y+S G+W++ A VR LMK+K ++T PGC IE+
Sbjct: 408 TGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Query: 528 GVVHEFVVDDVSHKRKGEIYETL 550
V F +D S+ R EI L
Sbjct: 468 NYVFMFKAEDGSNCRMLEIVHVL 490
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 4/250 (1%)
Query: 133 RFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFL 192
+ FE++ V + MI ++ L LY MR+ N + + + +C
Sbjct: 176 KVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSG 235
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
+ G VHC G +S + +++ +Y +C DA ++FD+ +D V+WN MI+
Sbjct: 236 ALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIA 295
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
++ A+ LF++M S +PD +T ++ G + N + E G
Sbjct: 296 GYAQHGLAMQAIELFELMMPKSGT-KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGL 354
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK-SVVSWSAMISGLAVNGYGKEAIEAFE 371
+N + L+ + R G L +A E+ P K + V W +++ V+G I A E
Sbjct: 355 KPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAE 414
Query: 372 EMQRIGIRPD 381
E R+ + PD
Sbjct: 415 E--RLMLEPD 422
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/525 (31%), Positives = 258/525 (49%), Gaps = 47/525 (8%)
Query: 73 PPSHK-----EQVISTIKSVSQK-PHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQ 126
P SH Q IS + S S+ HL Q+ + ++ + L H + L L L
Sbjct: 14 PSSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLR--LC 71
Query: 127 DPIYSRRFFEQINRPIVSHFNTMIRAYSMSDS--PQKGLYLYRDMRRRGIA-ANPLSSSF 183
+ Y+R F++ + P + ++ AYS S +R M R + N
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 184 AVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQ------------------ 225
+KS VH ++FK G ++ TA++ Y+
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 226 ------------CRKGD--DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQ 271
R GD +A +F++MP+RD +WN +++ C +N +A+SLF M
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
+ + P++VT +L+ + IH + R + +SNSL+ +Y +CG
Sbjct: 252 NEPS-IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 332 LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGI---RPDDQTFTGV 388
L++A VF KS+ +W++MI+ A++G +EAI FEEM ++ I +PD TF G+
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 389 LSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKP 448
L+AC+H GLV +G +FD M FGI P I HYGC++DLLGRAG D+A EV++TM +K
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKA 430
Query: 449 DPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRT 508
D IW +LL AC+IHGH+ L E ++ L+ L G ++ N+Y G+WE+ R
Sbjct: 431 DEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARK 490
Query: 509 LMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDI 553
++K + PG IE+ VH+F D SH EIY LD +
Sbjct: 491 MIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 275 bits (703), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 244/469 (52%), Gaps = 13/469 (2%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
+ IH + + D V L A +G L++ I + F + V +N MI +
Sbjct: 272 MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAI---KLFSLMPSKNVVTYNAMISGF 328
Query: 154 SMSD-----SPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDG 208
D + + L+ DM+RRG+ +P + S +K+C + G Q+H + K+
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 209 HQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFD 268
QSD + +A+++LY+ +D + F ++D +W MI C V+N + A LF
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 269 VMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSR 328
Q S+ P++ T +L GE+I Y ++ G ++ S I+MY++
Sbjct: 449 --QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAK 506
Query: 329 CGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGV 388
G + A +VF+ N V ++SAMIS LA +G EA+ FE M+ GI+P+ Q F GV
Sbjct: 507 SGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGV 566
Query: 389 LSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKP 448
L AC H GLV +G+ +F M ++ I PN H+ C+VDLLGR G L A +I + +
Sbjct: 567 LIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQD 626
Query: 449 DPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRT 508
P WR LL +CR++ +G+RV ERL+EL+ + +G YVLL NIY+ +G EVR
Sbjct: 627 HPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRE 686
Query: 509 LMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIY---ETLDDIN 554
LM+++ ++ P I + H F V D+SH IY ET+D+++
Sbjct: 687 LMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMDNVD 735
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 6/278 (2%)
Query: 130 YSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
++R+ F+++ + FN++I Y+ ++ + L+ + R + + + + A+ C
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
D+ G +H V +G L+ ++D+YS+C K D A +FD +RD V+WN
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 250 MISCCVRNNRTRDALSLFDVMQSTS-NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+IS VR + L+L M N + +E G IH Y
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGL-----AVNGYG 363
+ G I + +L+ MY++ G L +A ++F P+K+VV+++AMISG +
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEG 401
EA + F +MQR G+ P TF+ VL ACS + ++ G
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 6/257 (2%)
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
+V G H ++ K LL ++++Y +CR+ A ++FD MP+R+ +++N +IS
Sbjct: 63 VVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISG 122
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+ A+ LF +++ + D T L+ GE +H ++ G
Sbjct: 123 YTQMGFYEQAMELF--LEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLS 180
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
+ L N LI MYS+CG LD+A +F + VSW+++ISG G +E + +M
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM 240
Query: 374 QRIGIRPDDQTFTGVLSACS---HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
R G+ VL AC + G +++GM+ + G+ +I ++D+ +
Sbjct: 241 HRDGLNLTTYALGSVLKACCINLNEGFIEKGMA-IHCYTAKLGMEFDIVVRTALLDMYAK 299
Query: 431 AGLLDKAYEVITTMAVK 447
G L +A ++ + M K
Sbjct: 300 NGSLKEAIKLFSLMPSK 316
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 296 SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMIS 355
S+ G+ H ++++ + L N+L+ MY +C L A ++F P ++++S++++IS
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 356 GLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGIT 415
G G+ ++A+E F E + ++ D T+ G L C +D G ++ G++
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNGLS 180
Query: 416 PNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLG 469
+ ++D+ + G LD+A + + D W +L I G+V +G
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDER-DQVSWNSL-----ISGYVRVG 228
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 249/459 (54%), Gaps = 4/459 (0%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
++ F Q N V F MI Y + L ++R + + I+ N ++ +
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
L + G ++H + K G + + AV+D+Y++C + + A ++F+ + +RD V+WN M
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSM 513
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
I+ C +++ A+ +F M S C D V+ S FG+ IH ++++
Sbjct: 514 ITRCAQSDNPSAAIDIFRQM-GVSGICY-DCVSISAALSACANLPSESFGKAIHGFMIKH 571
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
+ ++LI MY++CG L A VF K++VSW+++I+ +G K+++ F
Sbjct: 572 SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLF 631
Query: 371 EEM-QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLG 429
EM ++ GIRPD TF ++S+C H G VDEG+ FF M ++GI P HY C+VDL G
Sbjct: 632 HEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFG 691
Query: 430 RAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVL 489
RAG L +AYE + +M PD +W TLLGACR+H +V L E +L++L +G YVL
Sbjct: 692 RAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVL 751
Query: 490 LLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYET 549
+ N +++A WE V +VR+LMKE+ +Q PG IE+ H FV DV+H IY
Sbjct: 752 ISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSL 811
Query: 550 LDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEK 588
L+ + +L++ GY+ + LH + K Y +S EK
Sbjct: 812 LNSLLGELRLEGYIPQPYLPLHP-ESSRKVYPVSRFIEK 849
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 205/441 (46%), Gaps = 14/441 (3%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
+Q+H +V + + + ++ LS + G D + + F ++R +N MI Y
Sbjct: 259 VQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD---ASKLFRMMSRADTVTWNCMISGY 315
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDS 213
S ++ L + +M G+ + ++ S + S +F ++ Q+HC + + D
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI 375
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQST 273
L +A++D Y +CR A +F + D V + MIS + N D+L +F +
Sbjct: 376 FLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV 435
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
K P+++T +L+ G +H +I+++G+ N+ ++I MY++CG ++
Sbjct: 436 --KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 334 KAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
AYE+F + +VSW++MI+ A + AI+ F +M GI D + + LSAC+
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 394 HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIW 453
+ G + MI + + +++ ++D+ + G L A V TM K + W
Sbjct: 554 NLPSESFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSW 611
Query: 454 RTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAE----VRTL 509
+++ AC HG + + ++E K+ D + L I SS H V E R++
Sbjct: 612 NSIIAACGNHGKLKDSLCLFHEMVE-KSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Query: 510 MKEKAIQTTPG--CCTIELKG 528
++ IQ C ++L G
Sbjct: 671 TEDYGIQPQQEHYACVVDLFG 691
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 159/349 (45%), Gaps = 11/349 (3%)
Query: 52 AINLAP-IPHHKRNQPTPISS-FPPSHKEQVISTIKSVSQKPHLL----QIHAHIVCTTL 105
A AP I +K++ P SS F + +S + P+LL Q+HA ++ ++
Sbjct: 7 AKRFAPAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSI 66
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYSRRFFE-QINRPIVSHFNTMIRAYSMSDSPQKGLY 164
D L A+ G D + F+ + R + +N++I ++ + + L
Sbjct: 67 SGDSYTDERILGMYAMCGSFSDC--GKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALA 124
Query: 165 LYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYS 224
Y M G++ + + VK+C+ + G + V G + + ++++ Y
Sbjct: 125 FYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYL 184
Query: 225 QCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTX 284
+ K D K+FD + Q+D V WNVM++ + + F VM+ ++ P+ VT
Sbjct: 185 EYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM--DQISPNAVTF 242
Query: 285 XXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPN 344
++ G ++H ++ G ++ NSL++MYS+CG D A ++F
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 345 KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
V+W+ MISG +G +E++ F EM G+ PD TF+ +L + S
Sbjct: 303 ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 111/275 (40%), Gaps = 11/275 (4%)
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVA--WNVMISCC 254
G QVH + + DS ++ +Y+ C D K+F + R + WN +IS
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
VRN AL+ + M PD T + + + + + + G
Sbjct: 114 VRNGLLNQALAFYFKMLCFG--VSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDC 171
Query: 315 AINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQ 374
+++SLI Y G +D ++F K V W+ M++G A G I+ F M+
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 375 RIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLL 434
I P+ TF VLS C+ L+D G+ ++ G+ ++ + + G
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRF 290
Query: 435 DKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLG 469
D A ++ M+ + D W C I G+V G
Sbjct: 291 DDASKLFRMMS-RADTVTWN-----CMISGYVQSG 319
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/522 (30%), Positives = 273/522 (52%), Gaps = 15/522 (2%)
Query: 129 IYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
+ + R F + P V + T+I Q L +M +R + N ++ S +++C
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
+ + +++H + + + ++ +++D Y+ RK D A V M +RD + +
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYT 497
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+++ + ALS+ + M + D ++ +LE G+ +H Y +
Sbjct: 498 SLVTRFNELGKHEMALSVINYMYG--DGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
+ G+ GA ++ NSL+ MYS+CG L+ A +VF VVSW+ ++SGLA NG+ A+
Sbjct: 556 KSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALS 615
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
AFEEM+ PD TF +LSACS+ L D G+ +F M + I P + HY +V +L
Sbjct: 616 AFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGIL 675
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYV 488
GRAG L++A V+ TM +KP+ I++TLL ACR G+++LGE + + + L + Y+
Sbjct: 676 GRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYI 735
Query: 489 LLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGE-IY 547
LL ++Y +G E + R LM EK + G T+E++G VH FV +DV+ K IY
Sbjct: 736 LLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIY 795
Query: 548 ETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVA 607
++ I +++K G ++ ++ S+HS K A+ +G + P + V
Sbjct: 796 AEIESIKEEIKRFG-------SPYRGNENA-----SFHSAKQAVVYGFIYASPEAPVHVV 843
Query: 608 TNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSC 649
N +C DCH F+ + + + ++ + +RD + H F+ G+CSC
Sbjct: 844 KNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 176/368 (47%), Gaps = 11/368 (2%)
Query: 106 VHDPAVSLHFLSRVALSGPL------QDPIY-SRRFFEQINRPIVSHFNTMIRAYSMSDS 158
+H P + L + L L D I+ +R+ F++++ V + MI A++ S
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 159 PQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTA 218
L L+ +M G N + S V+SC DI G +VH +V K G + +S++ ++
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 219 VMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
+ DLYS+C + +AC++F + DT++W +MIS V + R+AL + M
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG--VP 222
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEV 338
P++ T LEFG+ IH+ I+ RG + L SL+ YS+ ++ A V
Sbjct: 223 PNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
Query: 339 FMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLV 398
+ + V W++++SG N KEA+ F EM+ +G++P++ T++ +LS CS +
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
Query: 399 DEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLG 458
D G + I + G + +VD+ + + + V P+ W TL+
Sbjct: 342 DFGKQIHSQTI-KVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLIL 400
Query: 459 ACRIHGHV 466
HG V
Sbjct: 401 GLVDHGFV 408
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 11/278 (3%)
Query: 186 KSCIRFLDIVG------GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM 239
KSCIR L G+ +HC V K G + L ++ LY + +A K+FDEM
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
R AW VMIS ++ ALSLF+ M ++ P++ T + +
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGT--HPNEFTFSSVVRSCAGLRDISY 142
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
G R+H +++ G+ G + +SL +YS+CG +A E+F N +SW+ MIS L
Sbjct: 143 GGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVG 202
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
+EA++ + EM + G+ P++ TF +L A S GL + G + +I GI N+
Sbjct: 203 ARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-GIPLNVV 260
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
+VD + ++ A V+ + + D +W +++
Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVV 297
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMI 354
NS G IH +++ G ++L N+L+++Y + + A ++F +++V +W+ MI
Sbjct: 37 NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMI 96
Query: 355 SGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF-- 412
S + A+ FEEM G P++ TF+ V+ +C +GL D +S+ R+ G
Sbjct: 97 SAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC--AGLRD--ISYGGRVHGSVIK 152
Query: 413 -GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
G N + DL + G +A E+ +++ D W ++ +
Sbjct: 153 TGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISS 199
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 212/381 (55%), Gaps = 31/381 (8%)
Query: 204 VFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDA 263
+F + Q D + ++D Y++CR+ A ++F++MP+R+TV+W+ M+ + A
Sbjct: 207 LFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMA 266
Query: 264 LSLFDVM-------------------------------QSTSNKCEPDDVTXXXXXXXXX 292
+FD M Q ++ + D
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 293 XXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSA 352
L G RIH+ + G + N+L+ MY++CG L KA++VF P K +VSW+
Sbjct: 327 ESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNT 386
Query: 353 MISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF 412
M+ GL V+G+GKEAIE F M+R GIRPD TF VL +C+H+GL+DEG+ +F M +
Sbjct: 387 MLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVY 446
Query: 413 GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERV 472
+ P + HYGC+VDLLGR G L +A +V+ TM ++P+ IW LLGACR+H V + + V
Sbjct: 447 DLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEV 506
Query: 473 IERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHE 532
++ L++L + G+Y LL NIY++A WE VA++R+ MK ++ G ++EL+ +HE
Sbjct: 507 LDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHE 566
Query: 533 FVVDDVSHKRKGEIYETLDDI 553
F V D SH + +IY+ L +
Sbjct: 567 FTVFDKSHPKSDQIYQMLGSL 587
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 206/430 (47%), Gaps = 29/430 (6%)
Query: 78 EQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQ 137
E+ + + + + Q+HA I+ L D ++ +S ++L + + R F Q
Sbjct: 20 EERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLC---RQTNLAVRVFNQ 76
Query: 138 INRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI--RFLDIV 195
+ P V N++IRA++ + P + +++ +M+R G+ A+ + F +K+C +L +V
Sbjct: 77 VQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVV 136
Query: 196 GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGD--DACKVFDEMPQRDTVAWNVMISC 253
+H ++ K G SD + A++D YS+C DA K+F++M +RDTV+WN M+
Sbjct: 137 K--MMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGG 194
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
V+ RDA LFD M + D ++ + + + ER
Sbjct: 195 LVKAGELRDARRLFDEMP------QRDLISWNTMLDGYARCREMSKAFELFEKMPERN-- 246
Query: 314 GAINLSNSLIAM-YSRCGCLDKAYEVF--MGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
+S S + M YS+ G ++ A +F M P K+VV+W+ +I+G A G KEA
Sbjct: 247 ---TVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
++M G++ D +L+AC+ SGL+ GM ++ + N + ++D+ +
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS-ILKRSNLGSNAYVLNALLDMYAK 362
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG-DYVL 489
G L KA++V + K D W T+L +HGH G+ IE ++ + D V
Sbjct: 363 CGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGH---GKEAIELFSRMRREGIRPDKVT 418
Query: 490 LLNIYSSAGH 499
+ + S H
Sbjct: 419 FIAVLCSCNH 428
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 143/333 (42%), Gaps = 18/333 (5%)
Query: 131 SRRFFEQINRPI--VSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
+R F+++ P V + +I Y+ ++ L M G+ + + + +C
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
+ G+++H + + S++ +L A++D+Y++C A VF+++P++D V+WN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
M+ + ++A+ LF M+ PD VT ++ G + Y M
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREG--IRPDKVTFIAVLCSCNHAGLIDEGID-YFYSM 442
Query: 309 ERGYGGAINLS--NSLIAMYSRCGCLDKAYEVFMGTPNK-SVVSWSAMISGLAVNGYGKE 365
E+ Y + L+ + R G L +A +V P + +VV W A++ ++
Sbjct: 443 EKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDI 502
Query: 366 AIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGI-TPNIHHYGCM 424
A E + + + + P D +LS + EG++ + G+ P+ +
Sbjct: 503 AKEVLDNL--VKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Query: 425 VDLLGRAGLLDKA-------YEVITTMAVKPDP 450
D + + DK+ Y+++ ++ PDP
Sbjct: 561 EDGIHEFTVFDKSHPKSDQIYQMLGSLIEPPDP 593
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/524 (31%), Positives = 262/524 (50%), Gaps = 6/524 (1%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDI 194
F + +N ++ + + K L L+ DM +RG+ S + AV +C +
Sbjct: 374 FANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEK 433
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR--DTVAWNVMIS 252
Q+H K G + + TA++D+ ++C + DA ++FD+ P + A +I
Sbjct: 434 KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIG 493
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
RN A+SLF K D+V+ E G +IH Y ++ GY
Sbjct: 494 GYARNGLPDKAVSLFH-RTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY 552
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
I+L NSLI+MY++C D A ++F V+SW+++IS + G EA+ +
Sbjct: 553 FSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSR 612
Query: 373 MQRIGIRPDDQTFTGVLSAC--SHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
M I+PD T T V+SA + S + F M + I P HY V +LG
Sbjct: 613 MNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGH 672
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLL 490
GLL++A + I +M V+P+ ++ R LL +CRIH + ++ +RV + ++ K + +Y+L
Sbjct: 673 WGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILK 732
Query: 491 LNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETL 550
NIYS++G W + +R M+E+ + P I + +H F D SH ++ +IY L
Sbjct: 733 SNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGL 792
Query: 551 DDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPP-GTTLRVATN 609
+ + + GY L +VD+ K L +HS KLA+ +G+L++ G +RV N
Sbjct: 793 EILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKN 852
Query: 610 VRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
V +C DCH F K S V R+++LRD FHHF G+CSC D W
Sbjct: 853 VMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 135/306 (44%), Gaps = 50/306 (16%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA-NPLSSSFAVKSCIRFLD 193
F ++ P V + +I +S + + L ++ MR+ G+ N + + +C+R
Sbjct: 137 FVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSR 196
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLY-----SQCRKGDDACKVFDEMPQRDTVAWN 248
G+Q+H + K G + + ++M LY S C DD K+FDE+PQRD +WN
Sbjct: 197 FSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC---DDVLKLFDEIPQRDVASWN 253
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEP---DDVTXXXXXXXXXXXNSLEFGERIHN 305
++S V+ ++ A LF M N+ E D T + L G +H
Sbjct: 254 TVVSSLVKEGKSHKAFDLFYEM----NRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHG 309
Query: 306 YIMERGYGGAINLSNSLIAMYSR-------------------------------CGCLDK 334
+ G ++++N+LI YS+ G +D
Sbjct: 310 RAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDS 369
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
A E+F K+ ++++A+++G NG+G +A++ F +M + G+ D + T + AC
Sbjct: 370 AVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC-- 427
Query: 395 SGLVDE 400
GLV E
Sbjct: 428 -GLVSE 432
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 38/231 (16%)
Query: 318 LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
L N+LI+ Y + G +A VF+ + +VVS++A+ISG + EA++ F M++ G
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 378 -IRPDDQTFTGVLSACS-----------HSGLVDEG-----------MSFFDRMIGE--- 411
++P++ TF +L+AC H +V G MS +D+ G
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCD 235
Query: 412 -----FGITP--NIHHYGCMVDLLGRAGLLDKAYEVITTM----AVKPDPTIWRTLLGAC 460
F P ++ + +V L + G KA+++ M D TLL +C
Sbjct: 236 DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 461 RIHGHVTLGERVIERLIELK-AQEAGDYVLLLNIYSSAGHWEKVAEVRTLM 510
+ G + R I + QE L+ YS +KV + +M
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMM 346
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 249/486 (51%), Gaps = 14/486 (2%)
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYSR--------RFFEQINRPIVSHFNTMIRAYSMSD 157
+H + L VALS L +YS+ + F+ ++ M+ YS +
Sbjct: 243 IHCITIKNGLLGFVALSNALV-TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 158 SPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLT 217
+ + L+ M GI + + + +C + G Q+H + K G + T
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361
Query: 218 AVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKC 277
A++D+Y++ DA K FD + +RD W +IS V+N+ +AL L+ M++
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAG--I 419
Query: 278 EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYE 337
P+D T +LE G+++H + ++ G+G + + ++L MYS+CG L+
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 338 VFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGL 397
VF TPNK VVSW+AMISGL+ NG G EA+E FEEM G+ PDD TF ++SACSH G
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGF 539
Query: 398 VDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
V+ G +F+ M + G+ P + HY CMVDLL RAG L +A E I + + +WR LL
Sbjct: 540 VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILL 599
Query: 458 GACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
AC+ HG LG E+L+ L ++E+ YV L IY++ G V V M+ +
Sbjct: 600 SACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSK 659
Query: 518 TPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKE 577
GC IELK H FVV D H E + + +++Q+ G+V L S ++E
Sbjct: 660 EVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSF---VEEE 716
Query: 578 KGYVLS 583
+G LS
Sbjct: 717 EGTQLS 722
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 190/403 (47%), Gaps = 21/403 (5%)
Query: 66 PTPISSFPPSHKEQVISTIKSVSQKPHLLQ---IHAHIVCT---TLVHDPAVSLHFLSRV 119
P+ + H ++ + SQ+ +L+ +H I+ T T + V ++F ++
Sbjct: 3 PSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKC 62
Query: 120 ALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMS---DSPQKGLYLYRDMRRRGIAA 176
G L + F I V +N++I YS + S + L+R+MR + I
Sbjct: 63 ---GKLAK---AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILP 116
Query: 177 NP--LSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACK 234
N L+ F +S ++ + G Q H V K D + T+++ +Y + +D K
Sbjct: 117 NAYTLAGIFKAESSLQSSTV--GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 235 VFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXX 294
VF MP+R+T W+ M+S R +A+ +F++ + D
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMI 354
+ G +IH ++ G G + LSN+L+ MYS+C L++A ++F + +++ ++WSAM+
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 355 SGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGI 414
+G + NG EA++ F M GI+P + T GVL+ACS ++EG ++ + G
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL-KLGF 353
Query: 415 TPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
++ +VD+ +AG L A + + + D +W +L+
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLI 395
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 9/288 (3%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+H+ ++ + + A +G L D +R+ F+ + V+ + ++I Y
Sbjct: 343 QLHSFLLKLGFERHLFATTALVDMYAKAGCLAD---ARKGFDCLQERDVALWTSLISGYV 399
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ ++ L LYR M+ GI N + + +K+C + G QVH + K G +
Sbjct: 400 QNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP 459
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ +A+ +YS+C +D VF P +D V+WN MIS N + +AL LF+ M +
Sbjct: 460 IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM--LA 517
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER-GYGGAINLSNSLIAMYSRCGCLD 333
EPDDVT +E G N + ++ G ++ ++ + SR G L
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLK 577
Query: 334 KAYEVFMGTPN--KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR 379
+A E F+ + N + W ++S +G + + A E++ +G R
Sbjct: 578 EAKE-FIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 214/363 (58%), Gaps = 3/363 (0%)
Query: 204 VFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDA 263
VF +S+ ++D Y + + D+A K+FD+MP+RD ++W MI+ V+ +A
Sbjct: 131 VFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEA 190
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLI 323
L F MQ + K PD V +L FG +H Y++ + + + +SNSLI
Sbjct: 191 LLWFREMQISGVK--PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLI 248
Query: 324 AMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQ 383
+Y RCGC++ A +VF ++VVSW+++I G A NG E++ F +MQ G +PD
Sbjct: 249 DLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAV 308
Query: 384 TFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITT 443
TFTG L+ACSH GLV+EG+ +F M ++ I+P I HYGC+VDL RAG L+ A +++ +
Sbjct: 309 TFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQS 368
Query: 444 MAVKPDPTIWRTLLGACRIHG-HVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEK 502
M +KP+ + +LL AC HG ++ L ER+++ L +L + +YV+L N+Y++ G WE
Sbjct: 369 MPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEG 428
Query: 503 VAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGY 562
+++R MK ++ PG +IE+ +H F+ D +H I E L+ I+ L++ G
Sbjct: 429 ASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGC 488
Query: 563 VVE 565
VVE
Sbjct: 489 VVE 491
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 38/248 (15%)
Query: 244 TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX--XXXXNSLEFGE 301
TV+W I+ RN R +A F M T EP+ +T S G+
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDM--TLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 302 RIHNYIMERGYG-GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVS----------- 349
+H Y + G + + ++I MYS+ G KA VF +K+ V+
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 350 --------------------WSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVL 389
W+AMI+G GY +EA+ F EMQ G++PD L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 390 SACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPD 449
+AC++ G + G+ + R + N+ ++DL R G ++ A +V M K
Sbjct: 214 NACTNLGALSFGL-WVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME-KRT 271
Query: 450 PTIWRTLL 457
W +++
Sbjct: 272 VVSWNSVI 279
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 6/217 (2%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
++ F + R ++S + MI + ++ L +R+M+ G+ + ++ A+ +C
Sbjct: 160 AKMFDKMPERDLIS-WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN 218
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
+ G+ VH V +++ + +++DLY +C + A +VF M +R V+WN +
Sbjct: 219 LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSV 278
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
I N ++L F MQ K PD VT +E G R IM+
Sbjct: 279 IVGFAANGNAHESLVYFRKMQEKGFK--PDAVTFTGALTACSHVGLVEEGLRYFQ-IMKC 335
Query: 311 GY--GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK 345
Y I L+ +YSR G L+ A ++ P K
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 244/464 (52%), Gaps = 5/464 (1%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+H ++ +D ++ L+ A S ++ + F+ I V ++T+I Y
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAV---NLFKMIAEKDVISWSTVIACYVQ 241
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLL 215
+ + + L ++ DM G N + +++C D+ G + H + G +++ +
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 301
Query: 216 LTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSN 275
TA++D+Y +C ++A VF +P++D V+W +IS N ++ F +M N
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML-LEN 360
Query: 276 KCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKA 335
PD + LE + H+Y+++ G+ + SL+ +YSRCG L A
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 336 YEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG-IRPDDQTFTGVLSACSH 394
+VF G K V W+++I+G ++G G +A+E F M + ++P++ TF +LSACSH
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
+GL+ EG+ F M+ ++ + PN+ HY +VDLLGR G LD A E+ M P P I
Sbjct: 481 AGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILG 540
Query: 455 TLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKA 514
TLLGACRIH + + E V ++L EL++ AG Y+L+ N+Y G WE V ++R +K++
Sbjct: 541 TLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRG 600
Query: 515 IQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLK 558
I+ IE++ VH FV DD H K +Y L +++ +K
Sbjct: 601 IKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 175/369 (47%), Gaps = 9/369 (2%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+R+ F ++ + + +NT++++ S ++ LY + M R + + A+K+C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 191 FLDIVGGVQVHCNVFKD-GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
++ G +H V KD SD + ++++ +Y +C + +A ++FDE+ + D V W+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME 309
M+S +N A+ F M S+ PD VT ++ G +H +++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASD-VTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 310 RGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEA 369
RG+ ++L NSL+ Y++ +A +F K V+SWS +I+ NG EA+
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 370 FEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLG 429
F +M G P+ T VL AC+ + +++G + I + G+ + +VD+
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYM 310
Query: 430 RAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIER--LIELKAQEAGDY 487
+ ++AY V + + K D W L+ ++G + R IE ++ L+ D
Sbjct: 311 KCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNG---MAHRSIEEFSIMLLENNTRPDA 366
Query: 488 VLLLNIYSS 496
+L++ + S
Sbjct: 367 ILMVKVLGS 375
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 237/436 (54%), Gaps = 8/436 (1%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+ T+I ++ GL +Y+ M P + AV++ + G Q+H +V
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVI 240
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALS 265
K G QS+ ++ +++DLY +C +A F EM +D + WN +IS R++ + +AL
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSS-EALL 299
Query: 266 LFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAM 325
+F +S P+ T +L G+++H I RG+ + L+N+LI M
Sbjct: 300 MFQRFESQG--FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDM 357
Query: 326 YSRCGCLDKAYEVFMGTPNK-SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQT 384
Y++CG + + VF ++ ++VSW++M+ G +GYG EA+E F++M GIRPD
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 385 FTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM 444
F VLSAC H+GLV++G+ +F+ M E+GI P+ Y C+VDLLGRAG + +AYE++ M
Sbjct: 418 FMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Query: 445 AVKPDPTIWRTLLGACRIHGHVTLGERVIER-LIELKAQEAGDYVLLLNIYSSAGHWEKV 503
KPD + W +LGAC+ H H L R+ R ++ELK + G YV+L IY++ G W
Sbjct: 478 PFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDF 537
Query: 504 AEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYV 563
A VR +M+ + G I ++ V F V D +Y L + ++ + AGYV
Sbjct: 538 ARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYV 597
Query: 564 VELSSELHKVDDKEKG 579
EL S V+D+E G
Sbjct: 598 PELDS---LVNDQEVG 610
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 9/231 (3%)
Query: 230 DDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM--QSTSNKCEPDDVTXXXX 287
++A +FDEMP RD VAW MI+ +N A F M Q TS P++ T
Sbjct: 62 EEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS----PNEFTLSSV 117
Query: 288 XXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC-LDKAYEVFMGTPNKS 346
L +G +H +++ G G++ + N+++ MY+ C ++ A +F K+
Sbjct: 118 LKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKN 177
Query: 347 VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFD 406
V+W+ +I+G G G ++ +++M T + A + V G
Sbjct: 178 DVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHA 237
Query: 407 RMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
+I G N+ ++DL R G L +A M K D W TL+
Sbjct: 238 SVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITWNTLI 286
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 318 LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
L+ +LI Y G +++A +F P++ VV+W+AMI+G A + Y A E F EM + G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL-LDK 436
P++ T + VL +C + ++ G + ++ + G+ +++ M+++ + ++
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYG-ALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 437 AYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSS 496
A + + VK D T W TL+ G G ++ ++++ L+ E Y + + + +S
Sbjct: 166 ACLIFRDIKVKNDVT-WTTLITGFTHLGDGIGGLKMYKQML-LENAEVTPYCITIAVRAS 223
Query: 497 A 497
A
Sbjct: 224 A 224
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 248/497 (49%), Gaps = 39/497 (7%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+HAH + T + D L L R+ L + + +Y+R+ F+ +N +I+AY
Sbjct: 6 QLHAHCLRTGV--DETKDL--LQRLLL---IPNLVYARKLFDHHQNSCTFLYNKLIQAYY 58
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ P + + LY + G+ + + +F + F +H F+ G +SDS
Sbjct: 59 VHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM---- 270
T ++ Y++ A +VFDEM +RD WN MI+ R + A+ LFD M
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 271 --------------------------QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
+P+ +T LE G R+
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 305 NYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPN-KSVVSWSAMISGLAVNGYG 363
Y E G+ I + N+ I MYS+CG +D A +F N +++ SW++MI LA +G
Sbjct: 239 GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGC 423
EA+ F +M R G +PD TF G+L AC H G+V +G F M I+P + HYGC
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 424 MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQE 483
M+DLLGR G L +AY++I TM +KPD +W TLLGAC HG+V + E E L +L+
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
Query: 484 AGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGV-VHEFVVDDVSHKR 542
G+ V++ NIY++ W+ V +R LMK++ + G GV VH+F V+D SH R
Sbjct: 419 PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPR 478
Query: 543 KGEIYETLDDINKQLKI 559
EIY+ L++I +++K+
Sbjct: 479 SYEIYQVLEEIFRRMKL 495
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 273/534 (51%), Gaps = 21/534 (3%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDI 194
FE I + +N+MI A+ + +K + ++ M G+ + + S + D+
Sbjct: 218 FEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDL 277
Query: 195 VGG------VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDAC-KVFDEMPQ-RDTVA 246
V +Q+H K G + + + TA++ +YS+ + C K+F EM RD VA
Sbjct: 278 VPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVA 337
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
WN +I+ + R A+ LF Q K PD T + IH
Sbjct: 338 WNGIITAFAVYDPER-AIHLFG--QLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQ 394
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEA 366
+++ G+ L+NSLI Y++CG LD VF ++ VVSW++M+ +++G
Sbjct: 395 VIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSI 454
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
+ F Q++ I PD TF +LSACSH+G V+EG+ F M + P ++HY C++D
Sbjct: 455 LPVF---QKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVID 511
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL-KAQEAG 485
+L RA +A EVI M + PD +W LLG+CR HG+ LG+ ++L EL + +
Sbjct: 512 MLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSM 571
Query: 486 DYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGE 545
Y+ + NIY++ G + + M+ ++ P E+ VHEF K
Sbjct: 572 SYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEA 631
Query: 546 IYETLDDINKQLKIAGYVVEL-SSELHKVDDKEKGYVLSYHSEKLAIAFGVL----ATPP 600
+Y L + LK GYV E+ S+ D++++ L +HSEKLA+AF V+ ++
Sbjct: 632 VYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDC 691
Query: 601 GTTL-RVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
G L ++ N R+C+DCHNF+KL S + +++++RD RFHHF+ CSC+DYW
Sbjct: 692 GVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 186 KSCIRFLDIVGGVQVHCNVFKD--GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRD 243
++C +++ G+ +H ++ + + +L ++++Y++C A +VFD MP+R+
Sbjct: 67 QACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERN 126
Query: 244 TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERI 303
V+W +I+ V+ ++ LF M S C P++ T E G+++
Sbjct: 127 VVSWTALITGYVQAGNEQEGFCLFSSMLS---HCFPNEFTLSSVLTSC----RYEPGKQV 179
Query: 304 HNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYE---VFMGTPNKSVVSWSAMISGLAVN 360
H ++ G +I ++N++I+MY RC AYE VF K++V+W++MI+
Sbjct: 180 HGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCC 239
Query: 361 GYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
GK+AI F M G+ D T + S+
Sbjct: 240 NLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 182/424 (42%), Gaps = 36/424 (8%)
Query: 129 IYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
+Y+R+ F+ + V + +I Y + + Q+G L+ M ++ + F + S
Sbjct: 113 LYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-----LSHCFPNEFTLSSV 167
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGD---DACKVFDEMPQRDTV 245
+ G QVH K G + AV+ +Y +C G +A VF+ + ++ V
Sbjct: 168 LTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLV 227
Query: 246 AWNVMIS---CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGE- 301
WN MI+ CC N + A+ +F M+ S+ D T + L E
Sbjct: 228 TWNSMIAAFQCC---NLGKKAIGVF--MRMHSDGVGFDRATLLNICSSLYKSSDLVPNEV 282
Query: 302 -----RIHNYIMERGYGGAINLSNSLIAMYSR-CGCLDKAYEVFMGTPN-KSVVSWSAMI 354
++H+ ++ G ++ +LI +YS Y++FM + + +V+W+ +I
Sbjct: 283 SKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGII 342
Query: 355 SGLAVNGYGKE-AIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFG 413
+ AV Y E AI F ++++ + PD TF+ VL AC+ +S ++I + G
Sbjct: 343 TAFAV--YDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVI-KGG 399
Query: 414 ITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVI 473
+ ++ + G LD V M + D W ++L A +HG V V
Sbjct: 400 FLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQVDSILPVF 458
Query: 474 ERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG----CCTIELKGV 529
+++ ++ A ++ LL+ S AG E+ + M EK +T P C I++
Sbjct: 459 QKM-DINPDSA-TFIALLSACSHAGRVEEGLRIFRSMFEKP-ETLPQLNHYACVIDMLSR 515
Query: 530 VHEF 533
F
Sbjct: 516 AERF 519
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 20/248 (8%)
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
VR+ R A+SLF S + + N L+ G +H++++ Y
Sbjct: 37 VRSGDIRRAVSLF---YSAPVELQSQQAYAALFQACAEQRNLLD-GINLHHHMLSHPYCY 92
Query: 315 AIN--LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+ N L+N LI MY++CG + A +VF P ++VVSW+A+I+G G +E F
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 373 MQRIGIRPDDQTFTGVLSACSHS-GLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
M P++ T + VL++C + G G++ + G+ +I+ ++ + GR
Sbjct: 153 MLSHCF-PNEFTLSSVLTSCRYEPGKQVHGLAL------KLGLHCSIYVANAVISMYGRC 205
Query: 432 GLLDKAYEVITTM-AVK-PDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG-DYV 488
AYE T A+K + W +++ A + LG++ I + + + G D
Sbjct: 206 HDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQC---CNLGKKAIGVFMRMHSDGVGFDRA 262
Query: 489 LLLNIYSS 496
LLNI SS
Sbjct: 263 TLLNICSS 270
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 259/505 (51%), Gaps = 38/505 (7%)
Query: 69 ISSFPPSHKEQVIS-----TIKSVSQKPHLLQIHA--------HIVCTTLVHDPAVSLHF 115
+SSF S K +++ T+K + L IH + T +H P ++ HF
Sbjct: 4 VSSFHQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHF 63
Query: 116 LSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDM---RRR 172
Y+ F+ I P ++TMIR S S P GL + M
Sbjct: 64 H-------------YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEE 110
Query: 173 GIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDG-HQSDSLLLTAVMDLYSQCRKGDD 231
IA + L+ F + +C++ G Q+HC V K+G SDS + T V+ +Y + + D
Sbjct: 111 DIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLD 170
Query: 232 ACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXX 291
A KVFDE+PQ D V W+V+++ VR + L +F M EPD+ +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREM--LVKGLEPDEFSVTTALTAC 228
Query: 292 XXXNSLEFGERIHNYIMERGY-GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
+L G+ IH ++ ++ + + + +L+ MY++CGC++ A EVF ++V SW
Sbjct: 229 AQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSW 288
Query: 351 SAMISGLAVNGYGKEAIEAFEEMQRI-GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI 409
+A+I G A GY K+A+ E ++R GI+PD GVL+AC+H G ++EG S + M
Sbjct: 289 AALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENME 348
Query: 410 GEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLG 469
+ ITP HY C+VDL+ RAG LD A +I M +KP ++W LL CR H +V LG
Sbjct: 349 ARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 470 ERVIERLIELKA----QEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE 525
E ++ L++L+ +E V L NIY S + ++VR +++++ ++ TPG +E
Sbjct: 409 ELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLE 468
Query: 526 LKGVVHEFVVDDVSHKRKGEIYETL 550
+ G V +FV DVSH +I+ +
Sbjct: 469 VDGNVTKFVSGDVSHPNLLQIHTVI 493
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 250/467 (53%), Gaps = 9/467 (1%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+H V L D + + G ++D +R+ F + V N +I YS
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD---ARKVFSSLPEWSVVSMNALIAGYS 606
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
++ ++ + L+++M RG+ + ++ + V++C + + G Q H + K G S+
Sbjct: 607 -QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 215 LL-TAVMDLYSQCRKGDDACKVFDEMPQ-RDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
L +++ +Y R +AC +F E+ + V W M+S +N +AL + M+
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
+ PD T +SL G IH+ I + SN+LI MY++CG +
Sbjct: 726 --DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 333 DKAYEVFMGTPNKS-VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
+ +VF +S VVSW+++I+G A NGY ++A++ F+ M++ I PD+ TF GVL+A
Sbjct: 784 KGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
CSH+G V +G F+ MIG++GI + H CMVDLLGR G L +A + I +KPD
Sbjct: 844 CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 452 IWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
+W +LLGACRIHG GE E+LIEL+ Q + YVLL NIY+S G WEK +R +M+
Sbjct: 904 LWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMR 963
Query: 512 EKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLK 558
++ ++ PG I+++ H F D SH G+I L+D+ +K
Sbjct: 964 DRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 219/515 (42%), Gaps = 55/515 (10%)
Query: 48 PVEPAINLAPIPHHKRN-QPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLV 106
P A N+ H KR + I F K V ST ++ + I A++ +V
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
Query: 107 HDPAVSLHFLSRVALSGPLQDPIYSR--------RFFEQINRPIVSHFNTMIRAYSMSDS 158
H A+ L S + + L +YS+ + FE + +N MIR Y+ +
Sbjct: 350 HAEAIKLGLASNIYVGSSLV-SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 159 PQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTA 218
K + L+ DM+ G + + + + +C D+ G Q H + K + + A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 219 VMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
++D+Y++C +DA ++F+ M RD V WN +I V++ +A LF M N C
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM----NLCG 524
Query: 279 --PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAY 336
D + L G+++H ++ G ++ +SLI MYS+CG + A
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 337 EVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC---- 392
+VF P SVVS +A+I+G + N +EA+ F+EM G+ P + TF ++ AC
Sbjct: 585 KVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPE 643
Query: 393 ------------SHSGLVDEGMSFFDRMIGEF----GIT------------PNIHHYGCM 424
+ G EG ++G + G+T +I + M
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 425 VDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKA 481
+ + G ++A + M V PD + T+L C + + G R I LI A
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG-RAIHSLIFHLA 762
Query: 482 QEAGDYV--LLLNIYSSAGHWEKVAEVRTLMKEKA 514
+ + L+++Y+ G + ++V M+ ++
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS 797
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 144/329 (43%), Gaps = 39/329 (11%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+RR FE I P + + Y + P++ + ++ MR
Sbjct: 214 ARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR-------------------- 253
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
+GH+ D L V++ Y + K DA +F EM D VAWNVM
Sbjct: 254 ---------------DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVM 298
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
IS + A+ F M+ +S K T +L+ G +H ++
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRS--TLGSVLSAIGIVANLDLGLVVHAEAIKL 356
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
G I + +SL++MYS+C ++ A +VF K+ V W+AMI G A NG + +E F
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF 416
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
+M+ G DD TFT +LS C+ S ++ G F +I + + N+ +VD+ +
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAK 475
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
G L+ A ++ M + D W T++G+
Sbjct: 476 CGALEDARQIFERMCDR-DNVTWNTIIGS 503
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 155/352 (44%), Gaps = 43/352 (12%)
Query: 130 YSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
Y+ + F+ + + V+ +N+M+ YS P K L + + I N + S + +C
Sbjct: 113 YAEKQFDFLEKD-VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCA 171
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
R ++ G Q+HC++ K G + +S A++D+Y++C + DA +VF+ + +TV W
Sbjct: 172 RETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTC 231
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME 309
+ S V+ +A+ +F+ M+ ++ PD L F I+ YI
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHR--PD---------------HLAFVTVINTYI-- 272
Query: 310 RGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEA 369
R G L A +F + VV+W+ MISG G AIE
Sbjct: 273 ------------------RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEY 314
Query: 370 FEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLG 429
F M++ ++ T VLSA +D G+ I + G+ NI+ +V +
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI-KLGLASNIYVGSSLVSMYS 373
Query: 430 RAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKA 481
+ ++ A +V + K D W ++ R + H +V+E +++K+
Sbjct: 374 KCEKMEAAAKVFEALEEKND-VFWNAMI---RGYAHNGESHKVMELFMDMKS 421
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 144/326 (44%), Gaps = 22/326 (6%)
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR 256
G VH G S+ L A++DLY++C + A K FD + ++D AWN M+S
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 257 NNR----TRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
+ R +SLF+ N+ P+ T ++EFG +IH +++ G
Sbjct: 138 IGKPGKVLRSFVSLFE------NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+L+ MY++C + A VF + + V W+ + SG G +EA+ FE
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M+ G RPD F V++ G + + F M +P++ + M+ G+ G
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM-----SSPDVVAWNVMISGHGKRG 306
Query: 433 LLDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYV- 488
A E M +VK + ++L A I ++ LG V I+L + YV
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL-GLASNIYVG 365
Query: 489 -LLLNIYSSAGHWEKVAEVRTLMKEK 513
L+++YS E A+V ++EK
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEK 391
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 296 SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMIS 355
+L G+ +H+ + G L N+++ +Y++C + A + F K V +W++M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLS 133
Query: 356 GLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGIT 415
+ G + + +F + I P+ TF+ VLS C+ V+ G MI + G+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI-KMGLE 192
Query: 416 PNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIER 475
N + G +VD+ + + A V + V P+ W C G+V G
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCW-----TCLFSGYVKAGLPEEAV 246
Query: 476 LIELKAQEAG------DYVLLLNIYSSAGHWEKVAEVRTLMKE 512
L+ + ++ G +V ++N Y G K+ + R L E
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLG---KLKDARLLFGE 286
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 225/401 (56%), Gaps = 6/401 (1%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+R F+++ R V + MI Y+ + L L R M+ G+ N ++ + V C
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
L + G +H + SD ++ T+++ +Y++C++ D +VF + T W+ +
Sbjct: 332 ALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAI 391
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
I+ CV+N DAL LF M+ EP+ T L IH Y+ +
Sbjct: 392 IAGCVQNELVSDALGLFKRMRR--EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT 449
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGT----PNKSVVSWSAMISGLAVNGYGKEA 366
G+ +++ + L+ +YS+CG L+ A+++F G +K VV W A+ISG ++G G A
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
++ F EM R G+ P++ TFT L+ACSHSGLV+EG++ F M+ + +HY C+VD
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVD 569
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGD 486
LLGRAG LD+AY +ITT+ +P T+W LL AC H +V LGE +L EL+ + G+
Sbjct: 570 LLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGN 629
Query: 487 YVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELK 527
YVLL NIY++ G W+ + +VR++M+ ++ PG TIE++
Sbjct: 630 YVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 13/324 (4%)
Query: 81 ISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPI-YSRRFFEQIN 139
+ +S+S+ L H H++ VS H LS ++++ L I Y+R+ FE++
Sbjct: 25 FAATQSISKTKAL---HCHVIT-----GGRVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANP--LSSSFAVKSCIRFLDIVGG 197
+ + +N +IR Y + ++ M G+ P + F K+ + G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRN 257
+ VH + + D + A++ +Y K + A VFD M RD ++WN MIS RN
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 258 NRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAIN 317
DAL +FD M + S + D T LE G +H + E+ G I
Sbjct: 197 GYMNDALMMFDWMVNES--VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 318 LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
+ N+L+ MY +CG +D+A VF + V++W+ MI+G +G + A+E MQ G
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 378 IRPDDQTFTGVLSACSHSGLVDEG 401
+RP+ T ++S C + V++G
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDG 338
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 143/309 (46%), Gaps = 14/309 (4%)
Query: 175 AANPLSSSFAVKSCIRFLDIVGGVQ----VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGD 230
A N LSS +S + + +HC+V G S +L T + Y+ C
Sbjct: 8 ANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVT-YALCGHIT 66
Query: 231 DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX 290
A K+F+EMPQ +++N++I VR DA+S+F M S KC PD T
Sbjct: 67 YARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKA 126
Query: 291 XXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
S++ G +H I+ +G + N+L+AMY G ++ A +VF N+ V+SW
Sbjct: 127 AGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISW 186
Query: 351 SAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG 410
+ MISG NGY +A+ F+ M + D T +L C H ++ G + +++
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN-VHKLVE 245
Query: 411 EFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGE 470
E + I +V++ + G +D+A V M + D W C I+G+ G+
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITW-----TCMINGYTEDGD 299
Query: 471 RVIERLIEL 479
+E +EL
Sbjct: 300 --VENALEL 306
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/495 (32%), Positives = 254/495 (51%), Gaps = 38/495 (7%)
Query: 69 ISSFPPSHKEQVIS-----TIKSVSQKPHLLQIHA--------HIVCTTLVHDPAVSLHF 115
+SSF S K +++ T+K + L IH + T +H P ++ HF
Sbjct: 4 VSSFHQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHF 63
Query: 116 LSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDM---RRR 172
Y+ F+ I P ++TMIR S S P GL + M
Sbjct: 64 H-------------YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEE 110
Query: 173 GIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDG-HQSDSLLLTAVMDLYSQCRKGDD 231
I + L+ F + +C++ G Q+HC V K+G SD + T V+ +Y + + D
Sbjct: 111 DITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFD 170
Query: 232 ACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXX 291
A KVFDE+PQ D V W+V+++ VR + L +F M EPD+ +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEM--LVRGIEPDEFSVTTALTAC 228
Query: 292 XXXNSLEFGERIHNYIMERGY-GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
+L G+ IH ++ ++ + + + +L+ MY++CGC++ A EVF ++V SW
Sbjct: 229 AQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSW 288
Query: 351 SAMISGLAVNGYGKEAIEAFEEMQRI-GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI 409
+A+I G A GY K+A + ++R GI+PD GVL+AC+H G ++EG + + M
Sbjct: 289 AALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENME 348
Query: 410 GEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLG 469
+GITP HY C+VDL+ RAG LD A ++I M +KP ++W LL CR H +V LG
Sbjct: 349 ARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 470 ERVIERLIELKA----QEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE 525
E ++ L++L+ +E V L NIY S + +VR +++++ I+ TPG +E
Sbjct: 409 ELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLE 468
Query: 526 LKGVVHEFVVDDVSH 540
+ G+V +FV DVSH
Sbjct: 469 VDGIVTKFVSGDVSH 483
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/434 (32%), Positives = 231/434 (53%), Gaps = 2/434 (0%)
Query: 129 IYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
+ R F+ ++ V +I ++ + GL L+ MRR + N ++ A+ +C
Sbjct: 207 VSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
IV G Q+H ++K G +S+ + +A+MD+YS+C +DA +F+ + D V+
Sbjct: 267 SGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMT 326
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
V++ +N +A+ F M E D NSL G+++H+ ++
Sbjct: 327 VILVGLAQNGSEEEAIQFFIRMLQAG--VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVI 384
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
+R + G ++N LI MYS+CG L + VF P ++ VSW++MI+ A +G+G A++
Sbjct: 385 KRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
+EEM + ++P D TF +L ACSH GL+D+G + M GI P HY C++D+L
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDML 504
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYV 488
GRAGLL +A I ++ +KPD IW+ LLGAC HG +GE E+L + + ++
Sbjct: 505 GRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHI 564
Query: 489 LLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYE 548
L+ NIYSS G W++ A+ MK + G +IE++ H FVV+D H + IY+
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYD 624
Query: 549 TLDDINKQLKIAGY 562
L + + GY
Sbjct: 625 VLSGLFPVMVDEGY 638
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 4/252 (1%)
Query: 207 DGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSL 266
D H++ ++ +++ LY++C K DA K+FDEMP RD ++ N++ +RN T L
Sbjct: 84 DIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVL 143
Query: 267 FDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMY 326
M + D T + IH + GY I++ N LI Y
Sbjct: 144 LKRMLGSGGF---DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSY 200
Query: 327 SRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFT 386
+CGC VF G +++V++ +A+ISGL N ++ + F M+R + P+ T+
Sbjct: 201 FKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYL 260
Query: 387 GVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAV 446
L+ACS S + EG ++ ++GI + ++D+ + G ++ A+ + +
Sbjct: 261 SALAACSGSQRIVEGQQ-IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTE 319
Query: 447 KPDPTIWRTLLG 458
+ ++ L+G
Sbjct: 320 VDEVSMTVILVG 331
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 167/410 (40%), Gaps = 31/410 (7%)
Query: 115 FLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRG- 173
LS A G L D I + F E R ++S N + + + + G L + M G
Sbjct: 96 LLSLYAKCGKLVDAI--KLFDEMPMRDVISQ-NIVFYGFLRNRETESGFVLLKRMLGSGG 152
Query: 174 IAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDAC 233
L+ +V F + +H G+ + + ++ Y +C
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTK--MIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 234 KVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXX 293
VFD M R+ + +IS + N D L LF +M+ P+ VT
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMR--RGLVHPNSVTYLSALAACSG 268
Query: 294 XNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAM 353
+ G++IH + + G + + ++L+ MYS+CG ++ A+ +F T VS + +
Sbjct: 269 SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 354 ISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG--- 410
+ GLA NG +EAI+ F M + G+ D + VL G+SF D +G
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL-----------GVSFIDNSLGLGK 377
Query: 411 -------EFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIH 463
+ + N ++++ + G L + V M K + W +++ A H
Sbjct: 378 QLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARH 436
Query: 464 GHVTLGERVIERLIELKAQEAG-DYVLLLNIYSSAGHWEKVAEVRTLMKE 512
GH ++ E + L+ + ++ LL+ S G +K E+ MKE
Sbjct: 437 GHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKE 486
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 215/395 (54%), Gaps = 12/395 (3%)
Query: 146 FNTMIRAYSM-SDSPQKGLYLYRDMRRRG-IAANPLSSSFAVKSCIRFLDIVGGVQVHCN 203
+N+MI Y+ SD L+ DM + I+ N + + G ++
Sbjct: 223 WNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKH---------GRIEDAKG 273
Query: 204 VFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDA 263
+F + D + ++D Y++ A +FD+MP RD VA+N M++ V+N +A
Sbjct: 274 LFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEA 333
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLI 323
L +F M+ S+ PDD T L +H YI+E+ + L +LI
Sbjct: 334 LEIFSDMEKESHLL-PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALI 392
Query: 324 AMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQ 383
MYS+CG + A VF G NKS+ W+AMI GLA++G G+ A + +++R+ ++PDD
Sbjct: 393 DMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDI 452
Query: 384 TFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITT 443
TF GVL+ACSHSGLV EG+ F+ M + I P + HYGCMVD+L R+G ++ A +I
Sbjct: 453 TFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEE 512
Query: 444 MAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKV 503
M V+P+ IWRT L AC H GE V + LI YVLL N+Y+S G W+ V
Sbjct: 513 MPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDV 572
Query: 504 AEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDV 538
VRT+MKE+ I+ PGC IEL G VHEF VD +
Sbjct: 573 RRVRTMMKERKIEKIPGCSWIELDGRVHEFFVDSI 607
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 209/492 (42%), Gaps = 84/492 (17%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDI 194
F ++ P + +N +I+++S P++ L L M G++ + S S +K+C R +
Sbjct: 80 FGEVEDPFL--WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCC 254
GG+Q+H + K G SD L ++ LY +C + ++FD MP+RD+V++N MI
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 255 VRNNRTRDALSLFDVM-----------QSTSNKCEPDDVTXXXXXXXXXX--XNSLEFGE 301
V+ A LFD+M S + D + + +
Sbjct: 198 VKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNS 257
Query: 302 RIHNYIMERGYGGAINLSN-----------SLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
I Y+ A L + ++I Y++ G + A +F P++ VV++
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAY 317
Query: 351 SAMISGLAVNGYGKEAIEAFEEMQRIG-IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI 409
++M++G N Y EA+E F +M++ + PDD T VL A + G + + + ++
Sbjct: 318 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIV 377
Query: 410 -------GEFGIT-----------------------PNIHHYGCMVDLLGRAGLLDKAYE 439
G+ G+ +I H+ M+ L GL + A++
Sbjct: 378 EKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFD 437
Query: 440 V---ITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERL-----IELKAQEAGDYVLLL 491
+ I +++KPD + +L AC G V G E + IE + Q G ++
Sbjct: 438 MLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG---CMV 494
Query: 492 NIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLD 551
+I S +G E + + I+ P +E V+ + SH ++ +ET +
Sbjct: 495 DILSRSGSIE--------LAKNLIEEMP----VEPNDVIWRTFLTACSHHKE---FETGE 539
Query: 552 DINKQLKI-AGY 562
+ K L + AGY
Sbjct: 540 LVAKHLILQAGY 551
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 109/282 (38%), Gaps = 25/282 (8%)
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLYSQCRK---GDDACKVFDEM--------PQRDTVAW 247
Q+H + K G +S L T ++ ++ R+ D A VF E D W
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 89
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
N +I R AL L + N D + ++ G +IH ++
Sbjct: 90 NAVIKSHSHGKDPRQALLL--LCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
+ G + L N LI +Y +CGCL + ++F P + VS+++MI G G A
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAR 207
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDL 427
E F+ M + + S S +G+ ++ + ++ + M+D
Sbjct: 208 ELFDLMPM-----EMKNLISWNSMISGYAQTSDGVDIASKLFADMP-EKDLISWNSMIDG 261
Query: 428 LGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLG 469
+ G ++ A + M + D W T+ I G+ LG
Sbjct: 262 YVKHGRIEDAKGLFDVMP-RRDVVTWATM-----IDGYAKLG 297
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 226/425 (53%), Gaps = 4/425 (0%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSS--SFAVKSCIRFL 192
F+ + + + ++I + ++ L ++ DM+ + P S + +C
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
+ G+QVH ++ K G + + ++++DLYS+C + A KVF M + VAWN MIS
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS 550
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
C RNN ++ LF++M S PD V+ SL G+ +H Y + G
Sbjct: 551 CYSRNNLPELSIDLFNLM--LSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGI 608
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+L N+LI MY +CG A +F +KS+++W+ MI G +G A+ F+E
Sbjct: 609 PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDE 668
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M++ G PDD TF ++SAC+HSG V+EG + F+ M ++GI PN+ HY MVDLLGRAG
Sbjct: 669 MKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAG 728
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLN 492
LL++AY I M ++ D +IW LL A R H +V LG E+L+ ++ + YV L+N
Sbjct: 729 LLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLIN 788
Query: 493 IYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDD 552
+Y AG + A++ LMKEK + PGC IE+ + F S K EI+ L+
Sbjct: 789 LYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNR 848
Query: 553 INKQL 557
+ +
Sbjct: 849 LKSNM 853
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 197/421 (46%), Gaps = 15/421 (3%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
QIH +V L +DP V LS + G + + + F + + +N M+ AY+
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE---AETVFSCVVDKRLEIWNAMVAAYA 349
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVG----GVQVHCNVFKDGHQ 210
+D L L+ MR++ + L SF + + I ++G G VH +FK Q
Sbjct: 350 ENDYGYSALDLFGFMRQKSV----LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQ 405
Query: 211 SDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM 270
S S + +A++ LYS+C DA VF M ++D VAW +IS +N + ++AL +F M
Sbjct: 406 STSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDM 465
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG 330
+ + +PD +L FG ++H +++ G + + +SLI +YS+CG
Sbjct: 466 KDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCG 525
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLS 390
+ A +VF +++V+W++MIS + N + +I+ F M GI PD + T VL
Sbjct: 526 LPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLV 585
Query: 391 ACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDP 450
A S + + +G S + GI + H ++D+ + G A + M K
Sbjct: 586 AISSTASLLKGKSLHGYTL-RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLI 644
Query: 451 TIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLM 510
T W ++ HG + + + KA E+ D V L++ S+ H V E + +
Sbjct: 645 T-WNLMIYGYGSHGDCITALSLFDEM--KKAGESPDDVTFLSLISACNHSGFVEEGKNIF 701
Query: 511 K 511
+
Sbjct: 702 E 702
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 184/415 (44%), Gaps = 27/415 (6%)
Query: 61 HKRNQP--TPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSR 118
H + P T + +FP ++ +++ + IH +V +DP ++ ++
Sbjct: 50 HDGSSPFWTSVFTFP-----SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNM 104
Query: 119 VALSGPLQDPIYSRRFFEQINRPI----VSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGI 174
G L + + Q + V+ +N+MI Y ++G+ +R M G+
Sbjct: 105 YVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGV 164
Query: 175 AANPLSSSFAVKSCIRFLDI--VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDA 232
+ S S V + + G Q+H + ++ +DS L TA++D+Y + DA
Sbjct: 165 RPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDA 224
Query: 233 CKVFDEMPQR-DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXX 291
+VF E+ + + V WNVMI + +L L+ + ++ S K T
Sbjct: 225 WRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ 284
Query: 292 XXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWS 351
+ FG +IH +++ G + SL++MYS+CG + +A VF +K + W+
Sbjct: 285 SENSG--FGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 352 AMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMS----FFDR 407
AM++ A N YG A++ F M++ + PD T + V+S CS GL + G S F R
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 408 MIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL-GACR 461
I T I ++ L + G AY V +M K D W +L+ G C+
Sbjct: 403 PIQS---TSTIE--SALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLCK 451
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 240/448 (53%), Gaps = 8/448 (1%)
Query: 132 RRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDM--RRRGIAANPLSSSFAVKSCI 189
R F ++ ++S + T+I Y+ +D + L L+RD+ +R I L S S +
Sbjct: 442 RAFLRMHDKDLIS-WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 500
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
+ + IV ++HC++ + G D+++ ++D+Y +CR A +VF+ + +D V+W
Sbjct: 501 KSMLIVK--EIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTS 557
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME 309
MIS N +A+ LF M T D V ++L G IH Y++
Sbjct: 558 MISSSALNGNESEAVELFRRMVETG--LSADSVALLCILSAAASLSALNKGREIHCYLLR 615
Query: 310 RGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEA 369
+G+ +++ +++ MY+ CG L A VF K ++ +++MI+ ++G GK A+E
Sbjct: 616 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 675
Query: 370 FEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLG 429
F++M+ + PD +F +L ACSH+GL+DEG F M E+ + P HY C+VD+LG
Sbjct: 676 FDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLG 735
Query: 430 RAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVL 489
RA + +A+E + M +P +W LL ACR H +GE +RL+EL+ + G+ VL
Sbjct: 736 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 795
Query: 490 LLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYET 549
+ N+++ G W V +VR MK ++ PGC IE+ G VH+F D SH EIYE
Sbjct: 796 VSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEK 855
Query: 550 LDDINKQLKIAGYVVELSSELHKVDDKE 577
L ++ ++L+ EL+ E + + E
Sbjct: 856 LSEVTRKLEREKGKRELAREFNAREKME 883
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 175/371 (47%), Gaps = 16/371 (4%)
Query: 67 TPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLS--RVALSGP 124
+P+ +F ++ ++ ++VSQ Q+H+ I T P+ L FL+ V + G
Sbjct: 78 SPVEAF--AYVLELCGKRRAVSQGR---QLHSRIFKTF----PSFELDFLAGKLVFMYGK 128
Query: 125 LQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFA 184
+ + F+++ +NTMI AY + P L LY +MR G+ S
Sbjct: 129 CGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPAL 188
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR-D 243
+K+C + DI G ++H + K G+ S ++ A++ +Y++ A ++FD ++ D
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248
Query: 244 TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERI 303
V WN ++S + ++ + L LF M T P+ T + + G+ I
Sbjct: 249 AVLWNSILSSYSTSGKSLETLELFREMHMTGPA--PNSYTIVSALTACDGFSYAKLGKEI 306
Query: 304 HNYIMERG-YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGY 362
H +++ + + + N+LIAMY+RCG + +A + N VV+W+++I G N
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYG 422
KEA+E F +M G + D+ + T +++A + GM +I + G N+
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI-KHGWDSNLQVGN 425
Query: 423 CMVDLLGRAGL 433
++D+ + L
Sbjct: 426 TLIDMYSKCNL 436
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 5/252 (1%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+ R Q+N V +N++I+ Y + ++ L + DM G ++ +S + + + R
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
+++ G+++H V K G S+ + ++D+YS+C + F M +D ++W +
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 458
Query: 251 ISCCVRNNRTRDALSLF-DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME 309
I+ +N+ +AL LF DV + + E D++ S+ + IH +I+
Sbjct: 459 IAGYAQNDCHVEALELFRDVAK---KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 310 RGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEA 369
+G + + N L+ +Y +C + A VF K VVSW++MIS A+NG EA+E
Sbjct: 516 KGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574
Query: 370 FEEMQRIGIRPD 381
F M G+ D
Sbjct: 575 FRRMVETGLSAD 586
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 144/340 (42%), Gaps = 25/340 (7%)
Query: 127 DPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLY---LYRDMRRRGIAAN--PLSS 181
+P R F Q N+P+ SP+ + L +R ++ N P+ +
Sbjct: 35 EPSCRRNPFRQSNQPV------------QVPSPKLACFDGVLTEAFQRLDVSENNSPVEA 82
Query: 182 -SFAVKSCIRFLDIVGGVQVHCNVFKDGHQSD-SLLLTAVMDLYSQCRKGDDACKVFDEM 239
++ ++ C + + G Q+H +FK + L ++ +Y +C DDA KVFDEM
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXX-XXXXXXXXXNSLE 298
P R AWN MI V N AL+L+ M+ P ++ +
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG---VPLGLSSFPALLKACAKLRDIR 199
Query: 299 FGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS-VVSWSAMISGL 357
G +H+ +++ GY + N+L++MY++ L A +F G K V W++++S
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 358 AVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPN 417
+ +G E +E F EM G P+ T L+AC G ++ +
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 418 IHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
++ ++ + R G + +A ++ M D W +L+
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 118/265 (44%), Gaps = 10/265 (3%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
+IH HI+ L+ D + V + G ++ Y+ R FE I V + +MI + +
Sbjct: 508 EIHCHILRKGLL-DTVIQNEL---VDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 563
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
++ + + + L+R M G++A+ ++ + + + G ++HC + + G +
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 623
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ AV+D+Y+ C A VFD + ++ + + MI+ + + A+ LFD M+ +
Sbjct: 624 IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN 683
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN--SLIAMYSRCGCL 332
PD ++ L+ G R IME Y + L+ M R C+
Sbjct: 684 --VSPDHISFLALLYACSHAGLLDEG-RGFLKIMEHEYELEPWPEHYVCLVDMLGRANCV 740
Query: 333 DKAYE-VFMGTPNKSVVSWSAMISG 356
+A+E V M + W A+++
Sbjct: 741 VEAFEFVKMMKTEPTAEVWCALLAA 765
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 169/488 (34%), Positives = 253/488 (51%), Gaps = 25/488 (5%)
Query: 80 VISTIKSVSQKPHLLQIHA-HIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQI 138
V++ I+S S + L + A H V L D V++ + ++ G D ++ FE I
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN-TWISTYGKCGDLDSAKLVFEAI 214
Query: 139 NRP--IVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFA--VKSCIRFLDI 194
+R V +N+M +AYS+ LY M R P S+F SC +
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF--KPDLSTFINLAASCQNPETL 272
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACK---VFDEMPQRDTVAWNVMI 251
G +H + G D + + +YS K +D C +FD M R V+W VMI
Sbjct: 273 TQGRLIHSHAIHLGTDQDIEAINTFISMYS---KSEDTCSARLLFDIMTSRTCVSWTVMI 329
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG 311
S +AL+LF M + K PD VT SLE G+ +I R
Sbjct: 330 SGYAEKGDMDEALALFHAMIKSGEK--PDLVTLLSLISGCGKFGSLETGK----WIDARA 383
Query: 312 --YG---GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEA 366
YG + + N+LI MYS+CG + +A ++F TP K+VV+W+ MI+G A+NG EA
Sbjct: 384 DIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEA 443
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
++ F +M + +P+ TF VL AC+HSG +++G +F M + I+P + HY CMVD
Sbjct: 444 LKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVD 503
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGD 486
LLGR G L++A E+I M+ KPD IW LL AC+IH +V + E+ E L L+ Q A
Sbjct: 504 LLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAP 563
Query: 487 YVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEI 546
YV + NIY++AG W+ A +R++MK++ I+ PG I++ G H F V + H I
Sbjct: 564 YVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVI 623
Query: 547 YETLDDIN 554
Y TL+ ++
Sbjct: 624 YFTLNGLS 631
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 4/272 (1%)
Query: 132 RRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRF 191
RR + V+ +N IR + P + L L+R+M+R G N + F K+C R
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 192 LDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMI 251
D+ VH ++ K SD + TA +D++ +C D A KVF+ MP+RD WN M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG 311
S ++ T A SLF M+ N+ PD VT SL+ E +H + G
Sbjct: 126 SGFCQSGHTDKAFSLFREMR--LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 312 YGGAINLSNSLIAMYSRCGCLDKAYEVF--MGTPNKSVVSWSAMISGLAVNGYGKEAIEA 369
+ ++N+ I+ Y +CG LD A VF + +++VVSW++M +V G +A
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 370 FEEMQRIGIRPDDQTFTGVLSACSHSGLVDEG 401
+ M R +PD TF + ++C + + +G
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 199/478 (41%), Gaps = 47/478 (9%)
Query: 98 AHIVCTTLVHDPAVSLHFLSRVALSGPLQDPI-------YSRRFFEQINRPIVSHFNTMI 150
A + C +VH + F S V + D Y+ + FE++ + +N M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 151 RAYSMSDSPQKGLYLYRDMRRRGIAANPLS-----SSFAVKSCIRFLDIVGGVQVHCNVF 205
+ S K L+R+MR I + ++ S + + ++ L+ + V + V
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQ--RDTVAWNVMISCCVRNNRTRDA 263
+++ + T Y +C D A VF+ + + R V+WN M DA
Sbjct: 186 VQVTVANTWIST-----YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLI 323
L+ +M K PD T +L G IH++ + G I N+ I
Sbjct: 241 FGLYCLMLREEFK--PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFI 298
Query: 324 AMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQ 383
+MYS+ A +F +++ VSW+ MISG A G EA+ F M + G +PD
Sbjct: 299 SMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLV 358
Query: 384 TFTGVLSACSHSGLVDEGMSFFDRMIGEFGIT-PNIHHYGCMVDLLGRAGLLDKAYEVIT 442
T ++S C G ++ G + D +G N+ ++D+ + G + +A ++
Sbjct: 359 TLLSLISGCGKFGSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 443 TMAVKPDPTI--WRTLLGACRIHGHVTLGERVIERLIELKAQEAG-DYVLLLNIYSSAGH 499
P+ T+ W T++ ++G ++ ++I+L + ++ +L + +G
Sbjct: 418 N---TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGS 474
Query: 500 WEKVAEVRTLMKEKAIQTTPG----CCTIELKGVVHEFVVDDVSHKRKGEIYETLDDI 553
EK E +MK+ +PG C ++L G RKG++ E L+ I
Sbjct: 475 LEKGWEYFHIMKQ-VYNISPGLDHYSCMVDLLG-------------RKGKLEEALELI 518
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 254/486 (52%), Gaps = 27/486 (5%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
LQI+ + ++L D V+ + + + G Q + R F+++ R +N +I A+
Sbjct: 402 LQIYGLAIKSSLSLDVCVAN---AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDS 213
+ + L+L+ M R I + + +K+C + G+++H ++ K G S+S
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNS 517
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVA--------------------WNVMISC 253
+ +++D+YS+C ++A K+ QR V+ WN +IS
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
V ++ DA LF M PD T S G++IH ++++
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMG--ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQ 635
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
+ + ++L+ MYS+CG L + +F + + V+W+AMI G A +G G+EAI+ FE M
Sbjct: 636 SDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM 695
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL 433
I+P+ TF +L AC+H GL+D+G+ +F M ++G+ P + HY MVD+LG++G
Sbjct: 696 ILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGK 755
Query: 434 LDKAYEVITTMAVKPDPTIWRTLLGACRIH-GHVTLGERVIERLIELKAQEAGDYVLLLN 492
+ +A E+I M + D IWRTLLG C IH +V + E L+ L Q++ Y LL N
Sbjct: 756 VKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSN 815
Query: 493 IYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDD 552
+Y+ AG WEKV+++R M+ ++ PGC +ELK +H F+V D +H R EIYE L
Sbjct: 816 VYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGL 875
Query: 553 INKQLK 558
I ++K
Sbjct: 876 IYSEMK 881
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 181/403 (44%), Gaps = 28/403 (6%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+HAH + + D V L A +QD E +NR +N MI YS
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ---SYNAMITGYS 358
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ K L L+ + G+ + +S S ++C + G+Q++ K D
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 418
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ A +D+Y +C+ +A +VFDEM +RD V+WN +I+ +N + + L LF M
Sbjct: 419 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM--LR 476
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
++ EPD+ T SL +G IH+ I++ G ++ SLI MYS+CG +++
Sbjct: 477 SRIEPDEFT-FGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 535
Query: 335 AYEV---FMGTPNKS-----------------VVSWSAMISGLAVNGYGKEAIEAFEEMQ 374
A ++ F N S VSW+++ISG + ++A F M
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
Query: 375 RIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLL 434
+GI PD T+ VL C++ G ++I + + +++ +VD+ + G L
Sbjct: 596 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYICSTLVDMYSKCGDL 654
Query: 435 DKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLI 477
+ ++ +++ D W ++ HG ++ ER+I
Sbjct: 655 HDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 184/398 (46%), Gaps = 32/398 (8%)
Query: 95 QIHAHIVC-----TTLVHDPAVSLHFLSRVALSG-------PLQDPI--------YSRR- 133
Q HAH++ TT V + + ++ SR +S PL+D + YS+
Sbjct: 69 QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSN 128
Query: 134 -------FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK 186
FF + V +N+M+ Y + K + ++ DM R GI + + + +K
Sbjct: 129 DMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 187 SCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVA 246
C D G+Q+H V + G +D + +A++D+Y++ ++ ++ +VF +P++++V+
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
W+ +I+ CV+NN AL F MQ + + L G ++H +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS--IYASVLRSCAALSELRLGGQLHAH 306
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEA 366
++ + + + + MY++C + A +F + N + S++AMI+G + +G +A
Sbjct: 307 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA 366
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
+ F + G+ D+ + +GV AC+ + EG+ + I ++ ++ +D
Sbjct: 367 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS-SLSLDVCVANAAID 425
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHG 464
+ G+ L +A+ V M + D W ++ A +G
Sbjct: 426 MYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 33/243 (13%)
Query: 182 SFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQ 241
SF K C + + G Q H ++ G + + +L ++ +Y+ R A VFD+MP
Sbjct: 52 SFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPL 111
Query: 242 RDTVAW-------------------------------NVMISCCVRNNRTRDALSLFDVM 270
RD V+W N M+S ++N + ++ +F M
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG 330
E D T G +IH ++ G + +++L+ MY++
Sbjct: 172 GREG--IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLS 390
++ VF G P K+ VSWSA+I+G N A++ F+EMQ++ + VL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 391 ACS 393
+C+
Sbjct: 290 SCA 292
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 320 NSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR 379
N +I YS+ + KA F P + VVSW++M+SG NG ++IE F +M R GI
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 380 PDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD---K 436
D +TF +L CS GM GI + GC D++ + LLD K
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQI-------HGIVVRV---GCDTDVVAASALLDMYAK 227
Query: 437 AYEVITTMAV-----KPDPTIWRTLLGACRIHGHVTLGERVIERLIELKA 481
+ ++ V + + W ++ C + ++L + + + ++ A
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/567 (28%), Positives = 265/567 (46%), Gaps = 70/567 (12%)
Query: 60 HHKRNQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRV 119
HH R+ +S PP+ K+ IK S L A ++ T+L D + F++
Sbjct: 760 HHLRDFSASLSLAPPNLKK----IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITAC 815
Query: 120 ALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPL 179
L + + Q+ P V +N + + + P + L LY M R ++ +
Sbjct: 816 TSFKRLDLAVST---MTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSY 872
Query: 180 S-------SSFAVK----------------------SCIRFLDIVGGVQVHCNVFKDGHQ 210
+ SSFA + + I F G ++ VF + +
Sbjct: 873 TYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE 932
Query: 211 SDSLLLTAVMDLYSQCRKGDDA----------------C---------------KVFDEM 239
D + T ++ Y + D A C +F++M
Sbjct: 933 RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQM 992
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
P +D ++W MI +N R R+A+++F M PD+VT LE
Sbjct: 993 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG--IIPDEVTMSTVISACAHLGVLEI 1050
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
G+ +H Y ++ G+ + + ++L+ MYS+CG L++A VF P K++ W+++I GLA
Sbjct: 1051 GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAA 1110
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
+G+ +EA++ F +M+ ++P+ TF V +AC+H+GLVDEG + MI ++ I N+
Sbjct: 1111 HGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 1170
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
HYG MV L +AGL+ +A E+I M +P+ IW LL CRIH ++ + E +L+ L
Sbjct: 1171 HYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVL 1230
Query: 480 KAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTT-PGCCTIELKGVVHEFVVDDV 538
+ +G Y LL+++Y+ W VAE+R M+E I+ PG +I + H F D
Sbjct: 1231 EPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADK 1290
Query: 539 SHKRKGEIYETLDDINKQLKIAGYVVE 565
SH E+ LD+I Q+ +AGYV E
Sbjct: 1291 SHSASDEVCLLLDEIYDQMGLAGYVQE 1317
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 225/421 (53%), Gaps = 3/421 (0%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+R F+++ R + +N+MI+ Y + + + M G + + + + +C R
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
+++ G +H V + +D + +++DLY +C + + A VF + + +WNVM
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVM 381
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
IS + A+ ++D M S K PD VT +LE G++IH I E
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVK--PDVVTFTSVLPACSQLAALEKGKQIHLSISES 439
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
L ++L+ MYS+CG +A+ +F P K VVSW+ MIS +G +EA+ F
Sbjct: 440 RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQF 499
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
+EMQ+ G++PD T VLSAC H+GL+DEG+ FF +M ++GI P I HY CM+D+LGR
Sbjct: 500 DEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGR 559
Query: 431 AGLLDKAYEVI-TTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVL 489
AG L +AYE+I T + + TL AC +H +LG+R+ L+E +A Y++
Sbjct: 560 AGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMV 619
Query: 490 LLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYET 549
L N+Y+S W+ VR MKE ++ PGC IE+ V F +D SH R +YE
Sbjct: 620 LFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYEC 679
Query: 550 L 550
L
Sbjct: 680 L 680
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 201/443 (45%), Gaps = 55/443 (12%)
Query: 105 LVHDPAVSLHFLSRVALSGPL-------QDPIYSRRFFEQIN-RPIVSHFNTMIRAYSMS 156
LVH ++L V L L +D +R FE + R V +N+++ YS +
Sbjct: 25 LVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKN 84
Query: 157 DSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVG----GVQVHCNVFKDGHQSD 212
L +++ + I + SF + I+ +G G +H V K G+ D
Sbjct: 85 SMFHDTLEVFKRLLNCSIC---VPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCD 141
Query: 213 SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
++ ++++ +Y++ +++ +VFDEMP+RD +WN +ISC ++ AL LF M+S
Sbjct: 142 VVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMES 201
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
+ EP+ V+ LE G+ IH +++G+ ++++L+ MY +C CL
Sbjct: 202 SGF--EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCL 259
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
+ A EVF P KS+V+W++MI G G K +E M G RP T T +L AC
Sbjct: 260 EVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 393 SHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL---GRAGLLD-------------- 435
S S + G F + + +I+ ++DL G A L +
Sbjct: 320 SRSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 436 -----------------KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE 478
+ Y+ + ++ VKPD + ++L AC + G+++ + E
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE 438
Query: 479 LKAQEAGDYVL--LLNIYSSAGH 499
+ E + +L LL++YS G+
Sbjct: 439 SRL-ETDELLLSALLDMYSKCGN 460
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 235/466 (50%), Gaps = 34/466 (7%)
Query: 90 KPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTM 149
+ L +IHAH++ L + HF+S + G L + Y+ R F I P V FN M
Sbjct: 17 RTRLPEIHAHLLRHFLHGSNLLLAHFIS---ICGSLSNSDYANRVFSHIQNPNVLVFNAM 73
Query: 150 IRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGH 209
I+ YS+ P + L + M+ RGI A+ + + +KSC D+ G VH + + G
Sbjct: 74 IKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGF 133
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDV 269
+ V++LY+ + DA KVFDEM +R+ V WN+MI + L LF
Sbjct: 134 HRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQ 193
Query: 270 MQ-----------STSNKC------------------EPDDVTXXXXXXXXXXXNSLEFG 300
M S+ +KC +PD+ T L+ G
Sbjct: 194 MSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTG 253
Query: 301 ERIHNYIMERG-YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
+ IH+ G + I + N+L+ Y + G L+ A +F ++VVSW+ +ISG AV
Sbjct: 254 KWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAV 313
Query: 360 NGYGKEAIEAFEEMQRIG-IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNI 418
NG G+ I+ F+ M G + P++ TF GVL+ CS++G V+ G F M+ F +
Sbjct: 314 NGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEART 373
Query: 419 HHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE 478
HYG MVDL+ R+G + +A++ + M V + +W +LL ACR HG V L E L++
Sbjct: 374 EHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK 433
Query: 479 LKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTI 524
++ +G+YVLL N+Y+ G W+ V +VRTLMK+ ++ + G TI
Sbjct: 434 IEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 207/394 (52%), Gaps = 6/394 (1%)
Query: 129 IYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
I+ R +Q PI +N ++R+Y +SP + +Y M R + + S +K+
Sbjct: 70 IFRSRILDQY--PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAA 127
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
++ D G ++H + G D + + LY + + ++A KVFDE P+R +WN
Sbjct: 128 VQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWN 187
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+I R +A+ +F M+ + EPDD T L ++H ++
Sbjct: 188 AIIGGLNHAGRANEAVEMFVDMKRSG--LEPDDFTMVSVTASCGGLGDLSLAFQLHKCVL 245
Query: 309 ERGY--GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEA 366
+ I + NSLI MY +CG +D A +F ++VVSWS+MI G A NG EA
Sbjct: 246 QAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEA 305
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
+E F +M+ G+RP+ TF GVLSAC H GLV+EG ++F M EF + P + HYGC+VD
Sbjct: 306 LECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVD 365
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGD 486
LL R G L +A +V+ M +KP+ +W L+G C G V + E V ++EL+ G
Sbjct: 366 LLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGV 425
Query: 487 YVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
YV+L N+Y+ G W+ V VR LMK K + P
Sbjct: 426 YVVLANVYALRGMWKDVERVRKLMKTKKVAKIPA 459
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 232/459 (50%), Gaps = 36/459 (7%)
Query: 129 IYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
+ +R F+ + V +NTM+ Y+ + + L+ Y++ RR GI N S + + +C
Sbjct: 130 VRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTAC 189
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFD----------- 237
++ + Q H V G S+ +L +++D Y++C + + A + FD
Sbjct: 190 VKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT 249
Query: 238 --------------------EMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKC 277
EMP+++ V+W +I+ VR AL LF M + K
Sbjct: 250 TLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK- 308
Query: 278 EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYE 337
P+ T SL G+ IH Y++ + +SLI MYS+ G L+ +
Sbjct: 309 -PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 338 VFMGTPNK-SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG 396
VF +K V W+ MIS LA +G G +A+ ++M + ++P+ T +L+ACSHSG
Sbjct: 368 VFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSG 427
Query: 397 LVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTL 456
LV+EG+ +F+ M + GI P+ HY C++DLLGRAG + I M +PD IW +
Sbjct: 428 LVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAI 487
Query: 457 LGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQ 516
LG CRIHG+ LG++ + LI+L + + Y+LL +IY+ G WE V ++R +MK++ +
Sbjct: 488 LGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVN 547
Query: 517 TTPGCCTIELKGVVHEFVVDDVS--HKRKGEIYETLDDI 553
IE++ V F V D S H RK EIY L ++
Sbjct: 548 KEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 320 NSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR 379
N++++ Y + G L +A VF P + VVSW+ M+ G A +G EA+ ++E +R GI+
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 380 PDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYE 439
++ +F G+L+AC S + +++ G N+ ++D + G ++ A
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA-GFLSNVVLSCSIIDAYAKCGQMESAKR 235
Query: 440 VITTMAVKPDPTIWRTLLGACRIHGHVTLGE 470
M VK D IW TL I G+ LG+
Sbjct: 236 CFDEMTVK-DIHIWTTL-----ISGYAKLGD 260
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 232/479 (48%), Gaps = 16/479 (3%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
IH H++ V V+ + G +QD + FE ++ V + ++I AY
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLC---LFENMSERDVVSWTSLIVAYKR 287
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLL 215
K + + MR + N + + +C +V G Q+HCNV G +
Sbjct: 288 IGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSV 347
Query: 216 LTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSN 275
++M +YS C A +F M RD ++W+ +I + + F M+ +
Sbjct: 348 SNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGT 407
Query: 276 KCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKA 335
K P D +E G ++H + G + +SLI MYS+CG + +A
Sbjct: 408 K--PTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Query: 336 YEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHS 395
+F T +VS +AMI+G A +G KEAI+ FE+ ++G RPD TF VL+AC+HS
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHS 525
Query: 396 GLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRT 455
G +D G +F+ M + + P HYGCMVDLL RAG L A ++I M+ K D +W T
Sbjct: 526 GQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTT 585
Query: 456 LLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAI 515
LL AC+ G + G R ER++EL A V L NIYSS G+ E+ A VR MK K +
Sbjct: 586 LLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 645
Query: 516 QTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVD 574
PG +I++K V FV D H + +IY L +L ++G +E H+ D
Sbjct: 646 IKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL-----ELAVSG------AEAHRFD 693
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 158/331 (47%), Gaps = 6/331 (1%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAV--KSC 188
+R+ F+++ + + ++I+ Y +++ + L L+ MR A +P +S +V K+C
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
+ +I G +H K S + ++++D+Y + K D +C+VF EMP R+ V W
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWT 178
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+I+ V R ++ L+ F M + D T +++G+ IH +++
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMSRSEEL--SDTYTFAIALKACAGLRQVKYGKAIHTHVI 236
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
RG+ + ++NSL MY+ CG + +F + VVSW+++I G +A+E
Sbjct: 237 VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVE 296
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
F +M+ + P++QTF + SAC+ + G ++ G+ ++ M+ +
Sbjct: 297 TFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL-SLGLNDSLSVSNSMMKMY 355
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
G L A + M + D W T++G
Sbjct: 356 STCGNLVSASVLFQGMRCR-DIISWSTIIGG 385
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/418 (36%), Positives = 234/418 (55%), Gaps = 19/418 (4%)
Query: 147 NTMIRAYSMSDSPQKGLYLYRDMRRRGIA-ANPLSSSFAVK-SCIRFLDIVGGVQVHCNV 204
N ++ Y S P K L +R R+ + + S FA+K S + + G Q+H V
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 205 FKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR-DTVAWNVMISCCVRNNRTRDA 263
K G + + T+++ YS D A +VFDE P++ + V W MIS N + +A
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLS--NS 321
+ LF M++ K E D V +++ GE I++ ++R A++L+ NS
Sbjct: 152 IELFKRMEA--EKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNS 209
Query: 322 LIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG---- 377
L+ MY + G +KA ++F + K V ++++MI G A+NG +E++E F++M+ I
Sbjct: 210 LLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQD 269
Query: 378 --IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
I P+D TF GVL ACSHSGLV+EG F MI ++ + P H+GCMVDL R+G L
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYS 495
A+E I M +KP+ IWRTLLGAC +HG+V LGE V R+ EL GDYV L NIY+
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYA 389
Query: 496 SAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRK---GEIYETL 550
S G W++ +++R ++++ + PG IEL +++EFV ++ + GEI E L
Sbjct: 390 SKGMWDEKSKMRDRVRKRRM---PGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVL 444
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 196/310 (63%), Gaps = 3/310 (0%)
Query: 218 AVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKC 277
A++D+Y +C + DA +VF E+ ++D V+WN MIS V R+++A+ LF +MQ TS+
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ-TSSGI 302
Query: 278 EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYE 337
+PD +++ G +H YI+ G ++ +++ MY++CG ++ A E
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 338 VFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGL 397
+F G +K+V +W+A++ GLA++G+G E++ FEEM ++G +P+ TF L+AC H+GL
Sbjct: 363 IFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGL 422
Query: 398 VDEGMSFFDRMIG-EFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTL 456
VDEG +F +M E+ + P + HYGCM+DLL RAGLLD+A E++ M VKPD I +
Sbjct: 423 VDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAI 482
Query: 457 LGACRIHGHVT-LGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAI 515
L AC+ G + L + +++ ++++ +++G YVLL NI+++ W+ VA +R LMK K I
Sbjct: 483 LSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGI 542
Query: 516 QTTPGCCTIE 525
PG IE
Sbjct: 543 SKVPGSSYIE 552
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 188/411 (45%), Gaps = 21/411 (5%)
Query: 76 HKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFF 135
K ++ I S QI ++ L+ D + ++ + S YS
Sbjct: 5 EKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFAS--YSSVIL 62
Query: 136 EQINRPIVSHF--NTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
I R ++S F NT++ +Y++ D P+ ++ Y+ G + + + K+C +F
Sbjct: 63 HSI-RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSG 121
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
I G Q+H V K G D + +++ Y C + +ACKVF EMP RD V+W +I+
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
R ++AL F M EP+ T L G+ IH I++R
Sbjct: 182 FTRTGLYKEALDTFSKMD-----VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
++ N+LI MY +C L A VF K VSW++MISGL KEAI+ F M
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
Query: 374 Q-RIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH---HYG-CMVDLL 428
Q GI+PD T VLSAC+ G VD G R + E+ +T I H G +VD+
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHG-----RWVHEYILTAGIKWDTHIGTAIVDMY 351
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
+ G ++ A E+ + K T W LLG IHGH R E +++L
Sbjct: 352 AKCGYIETALEIFNGIRSKNVFT-WNALLGGLAIHGHGLESLRYFEEMVKL 401
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 254/471 (53%), Gaps = 11/471 (2%)
Query: 93 LLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQI--NRPIVSHFNTMI 150
L Q+HA ++ L H+ + +S A G + D ++R F+ + ++ ++S +N+MI
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSD---AKRVFDGLGGSKDLIS-WNSMI 277
Query: 151 RAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQ 210
+S + + L+ M+R + + + + + +C + G +H V K G +
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 211 SDSLLLTAVMDLYSQCRKG--DDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFD 268
+ A++ +Y Q G +DA +F+ + +D ++WN +I+ + + DA+ F
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397
Query: 269 VMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSR 328
++S+ K DD +L+ G++IH + G+ + +SLI MYS+
Sbjct: 398 YLRSSEIKV--DDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSK 455
Query: 329 CGCLDKAYEVFMGTPNK-SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTG 387
CG ++ A + F +K S V+W+AMI G A +G G+ +++ F +M ++ D TFT
Sbjct: 456 CGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTA 515
Query: 388 VLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVK 447
+L+ACSH+GL+ EG+ + M + I P + HY VDLLGRAGL++KA E+I +M +
Sbjct: 516 ILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLN 575
Query: 448 PDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVR 507
PDP + +T LG CR G + + +V L+E++ ++ YV L ++YS WE+ A V+
Sbjct: 576 PDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVK 635
Query: 508 TLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLK 558
+MKE+ ++ PG IE++ V F +D S+ +IY + D+ ++++
Sbjct: 636 KMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 151/300 (50%), Gaps = 13/300 (4%)
Query: 104 TLVHDPAVSLHFLSRVALSGPLQDPI-------YSRRFFEQINRPIVSHFNTMIRAYSMS 156
+L H A+ +S + +S + D Y+ F+++ + +NTMI Y+
Sbjct: 20 SLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSC 79
Query: 157 DSPQKGLYLYRDMRRRGIAANPLSSSFAVK--SCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ L+ M+R G + S S +K + ++ D+ G QVH V K G++ +
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDL--GEQVHGLVIKGGYECNVY 137
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ ++++D+Y++C + +DA + F E+ + ++V+WN +I+ V+ + A L +M+ +
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA 197
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
D T +++H +++ G I + N++I+ Y+ CG +
Sbjct: 198 -AVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSD 256
Query: 335 AYEVFMGT-PNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
A VF G +K ++SW++MI+G + + + A E F +MQR + D T+TG+LSACS
Sbjct: 257 AKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 304 HNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYG 363
H Y ++ G I +SN ++ Y + G L A +F P + VSW+ MISG G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGC 423
++A F M+R G D +F+ +L + D G +I + G N++
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI-KGGYECNVYVGSS 141
Query: 424 MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
+VD+ + ++ A+E ++ +P+ W L+
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAG 176
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 218/407 (53%), Gaps = 6/407 (1%)
Query: 130 YSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
Y+R+ F++I +N+MI YS + + + L+R M G + + + +C
Sbjct: 185 YARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACS 244
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
D+ G + + L + ++ +Y +C D A +VF++M ++D VAW
Sbjct: 245 HLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTA 304
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME 309
MI+ +N ++ +A LF M+ T PD T +LE G++I + E
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTG--VSPDAGTLSTVLSACGSVGALELGKQIETHASE 362
Query: 310 RGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEA 369
I ++ L+ MY +CG +++A VF P K+ +W+AMI+ A G+ KEA+
Sbjct: 363 LSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLL 422
Query: 370 FEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLG 429
F+ R+ + P D TF GVLSAC H+GLV +G +F M FG+ P I HY ++DLL
Sbjct: 423 FD---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLS 479
Query: 430 RAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK-AQEAGDYV 488
RAG+LD+A+E + KPD + +LGAC V + E+ + L+E+K A+ AG+YV
Sbjct: 480 RAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 539
Query: 489 LLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVV 535
+ N+ + W++ A++R LM+++ + TPGC IE++G + EF+
Sbjct: 540 ISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 173/353 (49%), Gaps = 5/353 (1%)
Query: 125 LQDPIYSRRFFEQINRPIVSHFNTMIRAYSMS-DSPQKGLYLYRDMRRRGIAANPLSSSF 183
L D YS F P FN MIR + + + + L LYR M+ G+ + + +F
Sbjct: 78 LGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNF 137
Query: 184 AVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRD 243
+C + +I G VH ++FK G + D + +++ +Y++C + A K+FDE+ +RD
Sbjct: 138 VFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERD 197
Query: 244 TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERI 303
TV+WN MIS +DA+ LF M+ EPD+ T L G +
Sbjct: 198 TVSWNSMISGYSEAGYAKDAMDLFRKMEEEG--FEPDERTLVSMLGACSHLGDLRTGRLL 255
Query: 304 HNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYG 363
+ + G + L + LI+MY +CG LD A VF K V+W+AMI+ + NG
Sbjct: 256 EEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKS 315
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGC 423
EA + F EM++ G+ PD T + VLSAC G ++ G + E + NI+
Sbjct: 316 SEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ-IETHASELSLQHNIYVATG 374
Query: 424 MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERL 476
+VD+ G+ G +++A V M VK + T W ++ A GH + +R+
Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVKNEAT-WNAMITAYAHQGHAKEALLLFDRM 426
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 14/277 (5%)
Query: 246 AWNVMISCCVRN-NRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
++N MI N ALSL+ M+ + K PD T + G +H
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRMKFSGLK--PDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 305 NYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGK 364
+ + + G +++++SLI MY++CG + A ++F + VSW++MISG + GY K
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 365 EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNI---HHY 421
+A++ F +M+ G PD++T +L ACSH G + G R++ E IT I
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG-----RLLEEMAITKKIGLSTFL 270
Query: 422 GC-MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK 480
G ++ + G+ G LD A V M +K D W ++ +G + ++ + +
Sbjct: 271 GSKLISMYGKCGDLDSARRVFNQM-IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 481 AQ-EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQ 516
+AG +L+ S G E ++ T E ++Q
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQ 366
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 194/345 (56%), Gaps = 6/345 (1%)
Query: 212 DSLLLTAVMDLYSQCRKGD-DAC-KVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDV 269
D + V++ Y+ GD +AC +VFD+MP+R+ +WN +I +N R + L F
Sbjct: 120 DVMSWNTVLEGYANI--GDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKR 177
Query: 270 MQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA-INLSNSLIAMYSR 328
M + P+D T + +FG+ +H Y GY +N+ N+LI MY +
Sbjct: 178 MVDEGSVV-PNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGK 236
Query: 329 CGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGV 388
CG ++ A EVF G + ++SW+ MI+GLA +G+G EA+ F EM+ GI PD TF GV
Sbjct: 237 CGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGV 296
Query: 389 LSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKP 448
L AC H GLV++G+++F+ M +F I P I H GC+VDLL RAG L +A E I M VK
Sbjct: 297 LCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKA 356
Query: 449 DPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRT 508
D IW TLLGA +++ V +GE +E LI+L+ + ++V+L NIY AG ++ A ++
Sbjct: 357 DAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKV 416
Query: 509 LMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDI 553
M++ + G IE + +F H R E+ L ++
Sbjct: 417 AMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 10/251 (3%)
Query: 132 RRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRG-IAANPLSSSFAVKSCIR 190
R F+ + V +N +I+ Y+ + + L ++ M G + N + + + +C +
Sbjct: 141 ERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAK 200
Query: 191 FLDIVGGVQVHCNVFKDGHQS-DSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
G VH G+ D + A++D+Y +C + A +VF + +RD ++WN
Sbjct: 201 LGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNT 260
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM- 308
MI+ + +AL+LF M+++ PD VT +E G N +
Sbjct: 261 MINGLAAHGHGTEALNLFHEMKNSG--ISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFT 318
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS-VVSWSAMISGLAVNGYGKEAI 367
+ I ++ + SR G L +A E P K+ V W+ ++ V Y K I
Sbjct: 319 DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKV--YKKVDI 376
Query: 368 E--AFEEMQRI 376
A EE+ ++
Sbjct: 377 GEVALEELIKL 387
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 164/587 (27%), Positives = 277/587 (47%), Gaps = 52/587 (8%)
Query: 15 NRFVLAATTLHSPSLSLSRCIHLLHSPQPNPHHPVEPAINLAPIPHHKRNQPTPISSFPP 74
+R + + + +L L++ + L +P PN V + +N+ + S
Sbjct: 70 SRLIFFSAITYPENLDLAKLLFLNFTPNPN----VFVYNTMISAVSSSKNECFGLYSSMI 125
Query: 75 SHK-----EQVISTIKSVSQKPHLLQIHAHIV---CTTLVHDPAVSLHFLSRVALSGPLQ 126
H+ + + +K+ S + QIH HI+ C +L + SL V L
Sbjct: 126 RHRVSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSL-----VKFYMELG 180
Query: 127 DPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK 186
+ + + F ++ P VS FN MI Y+ + L LY M GI + + +
Sbjct: 181 NFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLV 240
Query: 187 SCIRFLDIVGGVQVHCNVFKDG--HQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
C DI G VH + + G + S+ +L A++D+Y +C++ A + FD M ++D
Sbjct: 241 CCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDM 300
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVM-------------------------------QST 273
+WN M+ VR A ++FD M +
Sbjct: 301 RSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTI 360
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
K +PD VT L G +H ++ G LS++LI MY +CG ++
Sbjct: 361 VEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIE 420
Query: 334 KAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
+A+ VF K V W++MI+GLA +G G++A++ F MQ G+ P++ T VL+ACS
Sbjct: 421 RAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS 480
Query: 394 HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVI-TTMAVKPDPTI 452
HSGLV+EG+ F+ M +FG P HYG +VDLL RAG +++A +++ M ++P ++
Sbjct: 481 HSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSM 540
Query: 453 WRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKE 512
W ++L ACR + E + L++L+ ++ G YVLL NIY++ G W + R M+
Sbjct: 541 WGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMEN 600
Query: 513 KAIQTTPGCCTIELKGVVHEFV-VDDVSHKRKGEIYETLDDINKQLK 558
+ ++ T G ++ +H FV + +H R EI L + ++K
Sbjct: 601 RGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 212/485 (43%), Gaps = 59/485 (12%)
Query: 62 KRNQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHD--PAVSLHFLSRV 119
K + P+ S +H+ V+ +++ + + Q+ A I+ L+ D P L F S
Sbjct: 21 KTTKWDPVQSLQLNHQSLVL--LENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFS-- 76
Query: 120 ALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPL 179
A++ P + F P V +NTMI A S S + G LY M R ++ +
Sbjct: 77 AITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFG--LYSSMIRHRVSPDRQ 134
Query: 180 SSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQS-DSLLLTAVMDLYSQCRKGDDACKVFDE 238
+ + +K+ FL V Q+HC++ G S + L +++ Y + A KVF
Sbjct: 135 TFLYLMKAS-SFLSEVK--QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFAR 191
Query: 239 MPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLE 298
MP D ++NVMI + + +AL L+ M S+ EPD+ T + +
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM--VSDGIEPDEYTVLSLLVCCGHLSDIR 249
Query: 299 FGERIHNYIMERG--YGGAINLSNSLIAMYSRC--------------------------- 329
G+ +H +I RG Y + LSN+L+ MY +C
Sbjct: 250 LGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVG 309
Query: 330 ----GCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI-EAFEEMQRI-GIRPDDQ 383
G ++ A VF P + +VSW++++ G + G + + E F EM + ++PD
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRV 369
Query: 384 TFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITT 443
T ++S +++G + G + ++ + + ++D+ + G++++A+ V T
Sbjct: 370 TMVSLISGAANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT 428
Query: 444 MAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG---DYVLLLNIYSSAGHW 500
A + D +W +++ HG+ ++ R+ QE G + V LL + ++ H
Sbjct: 429 -ATEKDVALWTSMITGLAFHGNGQQALQLFGRM-----QEEGVTPNNVTLLAVLTACSHS 482
Query: 501 EKVAE 505
V E
Sbjct: 483 GLVEE 487
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 154/499 (30%), Positives = 246/499 (49%), Gaps = 39/499 (7%)
Query: 85 KSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVS 144
KS+S+ L +IH ++ L + LS ALS D Y+ +F +++ P
Sbjct: 19 KSMSE---LYKIHTLLITLGLSEEEPFVSQTLSFSALSSS-GDVDYAYKFLSKLSDPPNY 74
Query: 145 HFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNV 204
+N +IR +S S +P+K + +Y M R G+ + ++ F +KS R + G +HC+V
Sbjct: 75 GWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSV 134
Query: 205 FKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP------------------------ 240
K G + D + ++ +Y R A K+FDEMP
Sbjct: 135 VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSAR 194
Query: 241 -------QRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXX 293
+RD V W+ MI V+ AL +FD M + + ++VT
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS-KANEVTMVSVICACAH 253
Query: 294 XNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSV--VSWS 351
+L G+ +H YI++ + L SLI MY++CG + A+ VF K + W+
Sbjct: 254 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 352 AMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGE 411
A+I GLA +G+ +E+++ F +M+ I PD+ TF +L+ACSH GLV E FF + + E
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFF-KSLKE 372
Query: 412 FGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGER 471
G P HY CMVD+L RAGL+ A++ I+ M +KP ++ LL C HG++ L E
Sbjct: 373 SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAET 432
Query: 472 VIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVH 531
V ++LIEL+ G YV L N+Y+ + +R M++K ++ G ++L G H
Sbjct: 433 VGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRH 492
Query: 532 EFVVDDVSHKRKGEIYETL 550
F+ D +H +IY L
Sbjct: 493 RFIAHDKTHFHSDKIYAVL 511
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 227/460 (49%), Gaps = 18/460 (3%)
Query: 64 NQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSG 123
N T + FP + + K+V H + +D V L A S
Sbjct: 204 NLSTIVGMFPALGRAGALREGKAV---------HGYCTRMGFSNDLVVKTGILDVYAKSK 254
Query: 124 PLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDS-PQKGLYLYRDMRRRGIA-ANPLSS 181
+ IY+RR F+ + ++ MI Y ++ + G ++ + +A P++
Sbjct: 255 CI---IYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAI 311
Query: 182 SFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQ 241
+ C RF D+ GG VHC K G D + ++ Y++ DA + F E+
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 242 RDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGE 301
+D +++N +I+ CV N R ++ LF M+++ + PD T +L G
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIR--PDITTLLGVLTACSHLAALGHGS 429
Query: 302 RIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNG 361
H Y + GY ++ N+L+ MY++CG LD A VF + +VSW+ M+ G ++G
Sbjct: 430 SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 362 YGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI-GEFGITPNIHH 420
GKEA+ F MQ G+ PD+ T +LSACSHSGLVDEG F+ M G+F + P I H
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDH 549
Query: 421 YGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK 480
Y CM DLL RAG LD+AY+ + M +PD + TLL AC + + LG V +++ L
Sbjct: 550 YNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL- 608
Query: 481 AQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
+ VLL N YS+A WE A +R + K++ + TPG
Sbjct: 609 GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPG 648
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 190/420 (45%), Gaps = 14/420 (3%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
IH+H+ C+ D V + A G L+ I + F+++ + + +N MI +S+
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAI---KVFDEMPKRDMVAWNAMISGFSL 181
Query: 156 SDSPQKGLYLYRDMRR-RGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ L+ DMRR G++ N + + R + G VH + G +D +
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ T ++D+Y++ + A +VFD +++ V W+ MI V N ++A +F M
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
N V L G +H Y ++ G+ + + N++I+ Y++ G L
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCD 361
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
A+ F K V+S++++I+G VN +E+ F EM+ GIRPD T GVL+ACSH
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSH 421
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
+ G S + G N ++D+ + G LD A V TM K D W
Sbjct: 422 LAALGHGSSCHGYCVVH-GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWN 479
Query: 455 TLLGACRIHGHVTLGERVIERLIELKAQEAG---DYVLLLNIYSSAGHWEKVAEVRTLMK 511
T+L IHG LG+ + + QE G D V LL I S+ H V E + L
Sbjct: 480 TMLFGFGIHG---LGKEALSLFNSM--QETGVNPDEVTLLAILSACSHSGLVDEGKQLFN 534
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 138/285 (48%), Gaps = 15/285 (5%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVS--HFNTMIRAY 153
IH H++ +L + L L+R L + +R F++I P ++ ++ MIRAY
Sbjct: 21 IHQHLLKRSLTLSSSTVLVNLTR--LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAY 78
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDS 213
+ +D +K L LY M G+ + F +K+C I G +H +V +D
Sbjct: 79 ASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDM 138
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS-----CCVRNNRTRDALSLFD 268
+ TA++D Y++C + + A KVFDEMP+RD VAWN MIS CC+ D + LF
Sbjct: 139 YVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCL-----TDVIGLFL 193
Query: 269 VMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSR 328
M+ + P+ T +L G+ +H Y G+ + + ++ +Y++
Sbjct: 194 DMRRI-DGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK 252
Query: 329 CGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
C+ A VF K+ V+WSAMI G N KEA E F +M
Sbjct: 253 SKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM 297
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 32/291 (10%)
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQ-SDSLLLTAVMDLYSQCRKGDDACKVFDEMP--Q 241
+++CIR ++V G +H ++ K S S +L + LY+ C + + A VFDE+P +
Sbjct: 6 LETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPR 65
Query: 242 RDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGE 301
+ +AW++MI N+ AL L+ M ++ + P T +++ G+
Sbjct: 66 INPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR--PTKYTYPFVLKACAGLRAIDDGK 123
Query: 302 RIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNG 361
IH+++ + + + +L+ Y++CG L+ A +VF P + +V+W+AMISG +++
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 362 YGKEAIEAFEEMQRI-GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHH 420
+ I F +M+RI G+ P+ T G+ A +G + EG + +H
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKA--------------VHG 229
Query: 421 Y----GCMVDLLGRAGLLD---KAYEVITTMAV-----KPDPTIWRTLLGA 459
Y G DL+ + G+LD K+ +I V K + W ++G
Sbjct: 230 YCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGG 280
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 199/350 (56%), Gaps = 3/350 (0%)
Query: 204 VFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDA 263
+F + + T ++ Y + D A K+FD MP+R+ V+WN MI +N + ++
Sbjct: 198 LFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEG 257
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLI 323
+ LF MQ+T++ +PDDVT +L GE H ++ + + + +++
Sbjct: 258 IRLFQEMQATTS-LDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAIL 316
Query: 324 AMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQ 383
MYS+CG ++KA +F P K V SW+AMI G A+NG + A++ F M I +PD+
Sbjct: 317 DMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEI 375
Query: 384 TFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITT 443
T V++AC+H GLV+EG +F ++ E G+ I HYGCMVDLLGRAG L +A ++IT
Sbjct: 376 TMLAVITACNHGGLVEEGRKWF-HVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITN 434
Query: 444 MAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKV 503
M +P+ I + L AC + + ER++++ +EL+ Q G+YVLL N+Y++ W+
Sbjct: 435 MPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDF 494
Query: 504 AEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDI 553
V+ +M++ + GC IE+ +V EF+ D +H + I+ L D+
Sbjct: 495 GMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDL 544
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 167/383 (43%), Gaps = 21/383 (5%)
Query: 130 YSRRFFEQINRPIVSHF-NTMIRAYSMSDSPQKGLYLYRDMRRRG-IAANPLSSSFAVKS 187
Y+R+ F+Q + S N+MI+AY + LYRD+R+ A + + + KS
Sbjct: 28 YARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 188 CIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAW 247
C + + G+Q+H +++ G +D + T V+D+Y++ K A FDEMP R V+W
Sbjct: 88 CSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSW 147
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
+IS +R A LFD M + + + F E H +
Sbjct: 148 TALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV 207
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
+ ++I Y +D A ++F P +++VSW+ MI G N +E I
Sbjct: 208 IT---------WTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGI 258
Query: 368 EAFEEMQ-RIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
F+EMQ + PDD T VL A S +G + G + + + + ++D
Sbjct: 259 RLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG-EWCHCFVQRKKLDKKVKVCTAILD 317
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLG--ERVIERLIELKAQEA 484
+ + G ++KA + M K + W + IHG+ G ++ + + +E
Sbjct: 318 MYSKCGEIEKAKRIFDEMPEKQVAS-WNAM-----IHGYALNGNARAALDLFVTMMIEEK 371
Query: 485 GDYVLLLNIYSSAGHWEKVAEVR 507
D + +L + ++ H V E R
Sbjct: 372 PDEITMLAVITACNHGGLVEEGR 394
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 125 LQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLS-SSF 183
++D +R+ F+ + + +NTMI Y + PQ+G+ L+++M+ A L
Sbjct: 220 IKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ----ATTSLDPDDV 275
Query: 184 AVKSCIRFLDIVGGVQV----HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM 239
+ S + + G + + HC V + + TA++D+YS+C + + A ++FDEM
Sbjct: 276 TILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEM 335
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
P++ +WN MI N R AL LF M +PD++T +E
Sbjct: 336 PEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE---KPDEITMLAVITACNHGGLVEE 392
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTP 343
G + + + E G I ++ + R G L +A ++ P
Sbjct: 393 GRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMP 436
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 210/388 (54%), Gaps = 7/388 (1%)
Query: 133 RFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFL 192
R E+ N+ +NTM++ Y K + L+R ++ GI + S++ + SC
Sbjct: 391 RISEEGNKEA---WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIG 447
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
++ G +HC V K ++ +++DLY + A ++F E + + WN MI+
Sbjct: 448 AVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIA 506
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
V ++ A++LFD M S + K P +T SLE G+ IH YI E +
Sbjct: 507 SYVHCEQSEKAIALFDRMVSENFK--PSSITLVTLLMACVNTGSLERGQMIHRYITETEH 564
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
++LS +LI MY++CG L+K+ E+F K V W+ MISG ++G + AI F++
Sbjct: 565 EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQ 624
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M+ ++P TF +LSAC+H+GLV++G F +M ++ + PN+ HY C+VDLL R+G
Sbjct: 625 MEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSG 683
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLN 492
L++A + +M PD IW TLL +C HG +G R+ ER + Q G Y++L N
Sbjct: 684 NLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLAN 743
Query: 493 IYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
+YS+AG WE+ R +M+E + G
Sbjct: 744 MYSAAGKWEEAERAREMMRESGVGKRAG 771
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 200/426 (46%), Gaps = 16/426 (3%)
Query: 69 ISSFPPSHKEQVISTI---KSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPL 125
+SS S+ ++ IS I +S+S + L + +A I+ L + V+ +S A G
Sbjct: 17 LSSSSASYVDRHISVILCDQSLSLES-LRKHNALIITGGLSENIFVASKLISSYASYGK- 74
Query: 126 QDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAV 185
P S R F + R + +N++I+A+ + + L + M G + + ++ V
Sbjct: 75 --PNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVV 132
Query: 186 KSCIRFLDIVGGVQVHCNVFK-DGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
+C L G VH V K G ++ + + + YS+C DAC VFDEMP RD
Sbjct: 133 SACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDV 192
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE-PDDVTXXXXXXXXXXXNSLEFGERI 303
VAW +IS V+N + L M S + + P+ T +L+ G +
Sbjct: 193 VAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCL 252
Query: 304 HNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYG 363
H + ++ G + + +S+ + YS+ G +AY F ++ + SW+++I+ LA +G
Sbjct: 253 HGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDM 312
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGE-FGITPNIHHYG 422
+E+ + F EMQ G+ PD + +++ LV +G +F +I F + + +
Sbjct: 313 EESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCN-- 370
Query: 423 CMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL-GACRIHGHVTLGE--RVIERL-IE 478
++ + + LL A ++ ++ + + W T+L G ++ HV E R I+ L IE
Sbjct: 371 SLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIE 430
Query: 479 LKAQEA 484
+ + A
Sbjct: 431 IDSASA 436
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 184/471 (39%), Gaps = 63/471 (13%)
Query: 87 VSQKPHLLQIHAHIVCTTLV-------HDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
VS LL H LV + AV F+ + G LQD F E +
Sbjct: 132 VSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLV--FDEMPD 189
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA---NPLSSSFAVKSCIRFLDIVG 196
R +V+ + +I + + + GL M G NP + ++C +
Sbjct: 190 RDVVA-WTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKE 248
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR 256
G +H K+G S + +++ YS+ +A F E+ D +W +I+ R
Sbjct: 249 GRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLAR 308
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+ ++ +F MQ+ PD V + G+ H +++ +
Sbjct: 309 SGDMEESFDMFWEMQNKG--MHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDS 366
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNK-SVVSWSAMISGLAVNGYGK-----EAIEAF 370
+ NSL++MY + L A ++F + + +W+ M+ GYGK + IE F
Sbjct: 367 TVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTML-----KGYGKMKCHVKCIELF 421
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
++Q +GI D + T V+S+CSH G V G S ++ + + I ++DL G+
Sbjct: 422 RKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV-KTSLDLTISVVNSLIDLYGK 480
Query: 431 AGLLDKAY--------EVITTMAV-------------------------KPDPTIWRTLL 457
G L A+ VIT A+ KP TLL
Sbjct: 481 MGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 540
Query: 458 GACRIHGHVTLGERVIERLIELKAQEAGDYV--LLLNIYSSAGHWEKVAEV 506
AC G + G+ +I R I E + L+++Y+ GH EK E+
Sbjct: 541 MACVNTGSLERGQ-MIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSREL 590
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 225/421 (53%), Gaps = 47/421 (11%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAAN-----PLSSSFA------VKSCIRFLDI 194
FN ++R YS+ ++P +LY ++R ++ P SF S RF +
Sbjct: 80 FNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSL 139
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS-- 252
+ G+ +H K G +S + TA++ +Y DA KVFDEMP+R+ V WNVMI+
Sbjct: 140 LLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGL 199
Query: 253 ----------CCVRN--NRT-----------------RDALSLFDVMQSTSNKCEPDDVT 283
C + NRT ++A+ LF M + + +P+++T
Sbjct: 200 TNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVAC-DAIKPNEIT 258
Query: 284 XXXXXXXXXXXNSLEFGERIHNYIMERGYGGA-INLSNSLIAMYSRCGCLDKAYEVFMGT 342
L+ +H Y+ +RG+ I ++NSLI Y++CGC+ A++ F+
Sbjct: 259 ILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEI 318
Query: 343 PN--KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDE 400
PN K++VSW+ MIS A++G GKEA+ F++M+R+G++P+ T VL+ACSH GL +E
Sbjct: 319 PNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEE 378
Query: 401 G-MSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
+ FF+ M+ E+ ITP++ HYGC+VD+L R G L++A ++ + ++ +WR LLGA
Sbjct: 379 EFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGA 438
Query: 460 CRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTP 519
C ++ L ERV +L+EL+ GDYVL+ NI+ G + R M + + P
Sbjct: 439 CSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLP 498
Query: 520 G 520
G
Sbjct: 499 G 499
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 11/234 (4%)
Query: 134 FFEQI-NRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRR-RGIAANPLSSSFAVKSCIRF 191
F E++ NR +VS + T+I Y+ D P++ + L+ M I N ++ + +
Sbjct: 211 FLEKMPNRTVVS-WTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNL 269
Query: 192 LDIVGGVQVHCNVFKDGH-QSDSLLLTAVMDLYSQCRKGDDACKVFDEMP--QRDTVAWN 248
D+ VH V K G D + +++D Y++C A K F E+P +++ V+W
Sbjct: 270 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXN--SLEFGERIHNY 306
MIS + ++A+S+F M+ K P+ VT EF E +
Sbjct: 330 TMISAFAIHGMGKEAVSMFKDMERLGLK--PNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTP-NKSVVSWSAMISGLAV 359
+ E + L+ M R G L++A ++ + P + V W ++ +V
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSV 441
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 187/339 (55%), Gaps = 15/339 (4%)
Query: 197 GVQVHCNVFKDGHQSDSLLL-TAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS--C 253
G VH V K G +S L+ T ++ Y++ A KVFDEMP+R +V WN MI C
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 254 CVR---NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
+ N+ R A+ LF + P D T LE G +H YI +
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL 249
Query: 311 GYGGAIN--LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
G+ ++ + +L+ MYS+CGCL+ A+ VF K+V +W++M +GLA+NG G E
Sbjct: 250 GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPN 309
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
M GI+P++ TFT +LSA H GLV+EG+ F M FG+TP I HYGC+VDLL
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLL 369
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE-------LKA 481
G+AG + +AY+ I M +KPD + R+L AC I+G +GE + + L+E L
Sbjct: 370 GKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSG 429
Query: 482 QEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
E DYV L N+ + G W +V ++R MKE+ I+T PG
Sbjct: 430 SECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPG 468
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 202/382 (52%), Gaps = 2/382 (0%)
Query: 173 GIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDA 232
G+ P + + ++ C + + G ++H +F G + L ++ LY+ A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 233 CKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXX 292
+F + RD + WN MIS V+ ++ L ++ M+ N+ PD T
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ--NRIVPDQYTFASVFRACS 220
Query: 293 XXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSA 352
+ LE G+R H +++R I + ++L+ MY +C + VF ++V++W++
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 353 MISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF 412
+ISG +G E ++ FE+M+ G RP+ TF VL+AC+H GLVD+G F M ++
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY 340
Query: 413 GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERV 472
GI P HY MVD LGRAG L +AYE + K P +W +LLGACRIHG+V L E
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELA 400
Query: 473 IERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHE 532
+ +EL G+YV+ N Y+S G E ++VR M+ ++ PG IEL+G VH
Sbjct: 401 ATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHR 460
Query: 533 FVVDDVSHKRKGEIYETLDDIN 554
F+ DD SH+ +IY+ + ++
Sbjct: 461 FMKDDTSHRLSEKIYKKVHEMT 482
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 9/270 (3%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
+IHA + + + + L ALSG LQ + F + + +N MI Y
Sbjct: 129 RIHAQMFVVGFALNEYLKVKLLILYALSGDLQT---AGILFRSLKIRDLIPWNAMISGYV 185
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
Q+GL++Y DMR+ I + + + ++C + G + H + K +S+ +
Sbjct: 186 QKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNII 245
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ +A++D+Y +C D +VFD++ R+ + W +IS + + + L F+ M+
Sbjct: 246 VDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG 305
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN--SLIAMYSRCGCL 332
C P+ VT ++ G H Y M+R YG + +++ R G L
Sbjct: 306 --CRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 362
Query: 333 DKAYEVFMGTPNKS-VVSWSAMISGLAVNG 361
+AYE M +P K W +++ ++G
Sbjct: 363 QEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 229/430 (53%), Gaps = 17/430 (3%)
Query: 131 SRRFFEQI-NRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
+++ F+++ +R +N ++ YS + L ++ MR G+ + + + + +
Sbjct: 214 AQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFT 273
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
DI G +H K G SD ++ A++D+Y + + ++A +F+ M +RD WN
Sbjct: 274 VSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNS 333
Query: 250 MISCCVRN--NRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
++ CV + L+LF+ M + + PD VT SL G IH Y+
Sbjct: 334 VL--CVHDYCGDHDGTLALFERMLCSGIR--PDIVTLTTVLPTCGRLASLRQGREIHGYM 389
Query: 308 MERGYGGAIN-------LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVN 360
+ G +N + NSL+ MY +CG L A VF K SW+ MI+G V
Sbjct: 390 I---VSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQ 446
Query: 361 GYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHH 420
G+ A++ F M R G++PD+ TF G+L ACSHSG ++EG +F +M + I P H
Sbjct: 447 SCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDH 506
Query: 421 YGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK 480
Y C++D+LGRA L++AYE+ + + +P +WR++L +CR+HG+ L +RL EL+
Sbjct: 507 YACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELE 566
Query: 481 AQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSH 540
+ G YVL+ N+Y AG +E+V +VR M+++ ++ TPGC I LK VH F + +H
Sbjct: 567 PEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTH 626
Query: 541 KRKGEIYETL 550
I++ L
Sbjct: 627 PEFKSIHDWL 636
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 205/484 (42%), Gaps = 27/484 (5%)
Query: 42 QPNPHHPVEPAINLAPIPHHKRNQPTPISSFPPSHKEQ----VISTIKSVSQKPHLL--- 94
P+ ++P+ LA + Q I P ++ I+T++ +Q+ +
Sbjct: 24 NPDLFAAIKPSSALASLYSTVSGQ---IEENPKRYEHHNVATCIATLQRCAQRKDYVSGQ 80
Query: 95 QIHAHIVCTTLVHD-PAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
QIH +V + D P ++ A G ++ + F R + +N +I +
Sbjct: 81 QIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVL---VFGGSERDVFG-YNALISGF 136
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDS 213
++ SP + YR+MR GI + + +K +++ +VH FK G SD
Sbjct: 137 VVNGSPLDAMETYREMRANGILPDKYTFPSLLKGS-DAMELSDVKKVHGLAFKLGFDSDC 195
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMPQR-DTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
+ + ++ YS+ +DA KVFDE+P R D+V WN +++ + R DAL +F M+
Sbjct: 196 YVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
+T ++ G IH ++ G G I +SN+LI MY + L
Sbjct: 256 EGVGVSRHTIT--SVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWL 313
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
++A +F + + +W++++ G + FE M GIRPD T T VL C
Sbjct: 314 EEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTC 373
Query: 393 SHSGLVDEGMSFFDRMIGEFGI---TPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPD 449
+ +G MI + + N + ++D+ + G L A V +M VK D
Sbjct: 374 GRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK-D 432
Query: 450 PTIWRTLLGACRIHGHVTLGERVIERLIEL-KAQEAGDYVLLLNIYSSAGHWEKVAEVRT 508
W ++ +G + GE ++ + +A D + + + + H + E R
Sbjct: 433 SASWNIMING---YGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRN 489
Query: 509 LMKE 512
+ +
Sbjct: 490 FLAQ 493
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 236/463 (50%), Gaps = 30/463 (6%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRR-RGIAANPLSSSFAVKSCI 189
+R+ F++++ V +N+MI YS S S + +Y+ M N ++ ++C
Sbjct: 186 ARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACG 245
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
+ D++ G++VH + ++ Q D L AV+ Y++C D A +FDEM ++D+V +
Sbjct: 246 QSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGA 305
Query: 250 MISCCVRNNRTRDALSLFDVMQS----TSN-----------------------KC--EPD 280
+IS + + ++A++LF M+S T N +C P+
Sbjct: 306 IISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPN 365
Query: 281 DVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFM 340
VT ++L+ G+ IH + + G I ++ S+I Y++ G L A VF
Sbjct: 366 TVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFD 425
Query: 341 GTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDE 400
++S+++W+A+I+ AV+G A F++MQ +G +PDD T T VLSA +HSG D
Sbjct: 426 NCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDM 485
Query: 401 GMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGAC 460
FD M+ ++ I P + HY CMV +L RAG L A E I+ M + P +W LL
Sbjct: 486 AQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGA 545
Query: 461 RIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
+ G + + +RL E++ + G+Y ++ N+Y+ AG WE+ VR MK ++ PG
Sbjct: 546 SVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPG 605
Query: 521 CCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYV 563
IE + + F+ D S +R E+YE ++ + + + Y+
Sbjct: 606 TSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 171/413 (41%), Gaps = 46/413 (11%)
Query: 92 HLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIR 151
H+LQ+HA IV ++ D ++ +S + ++ F++I +N ++
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALH---VFDEITVRNAFSYNALLI 96
Query: 152 AYSMSDSPQKGLYLYRDMRRRGI----AANPLSSSF-----AVKSCIRFLDIVGGVQVHC 202
AY+ + L+ AA P S S A+ C F QVH
Sbjct: 97 AYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHG 156
Query: 203 NVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRD 262
V + G SD + ++ Y++C + A KVFDEM +RD V+WN MIS ++ D
Sbjct: 157 FVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 263 ALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSL 322
++ M + S+ +P+ VT + L FG +H ++E ++L N++
Sbjct: 217 CKKMYKAMLACSD-FKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAV 275
Query: 323 IAMYSRCGCLDKAYEVFMGTPNKSVV-------------------------------SWS 351
I Y++CG LD A +F K V +W+
Sbjct: 276 IGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWN 335
Query: 352 AMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGE 411
AMISGL N + +E I +F EM R G RP+ T + +L + ++S + G I
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN 395
Query: 412 FGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHG 464
G NI+ ++D + G L A V + W ++ A +HG
Sbjct: 396 -GADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS-LIAWTAIITAYAVHG 446
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 223/438 (50%), Gaps = 5/438 (1%)
Query: 129 IYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
++ + +F + +++ +N + + + L L MR + +P++ +K+C
Sbjct: 232 LFDKMWFSGVEVSVIT-WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC 290
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
I G ++H + + ++ +YS+C+ A VF + + WN
Sbjct: 291 SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWN 350
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+IS + N++ +A L M +P+ +T +L+ G+ H YI+
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAG--FQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 309 ERG-YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
R + L NSL+ +Y++ G + A +V + V+++++I G G G A+
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVAL 468
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDL 427
F+EM R GI+PD T VLSACSHS LV EG F +M E+GI P + H+ CMVDL
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDL 528
Query: 428 LGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDY 487
GRAG L KA ++I M KP W TLL AC IHG+ +G+ E+L+E+K + G Y
Sbjct: 529 YGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYY 588
Query: 488 VLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIY 547
VL+ N+Y++AG W K+AEVRT+M++ ++ PGC I+ F V D S Y
Sbjct: 589 VLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTY 648
Query: 548 ETLDDINKQLK-IAGYVV 564
LD +N+ +K AGY +
Sbjct: 649 PLLDGLNQLMKDNAGYAI 666
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 187/454 (41%), Gaps = 57/454 (12%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+N +I +Y+ ++ ++ + Y+ M +GI + + +K+C LD+ G VH ++
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN----------------- 248
++S + A++ +Y + R A ++FD M +RD V+WN
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 249 ------------------VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX 290
++ C++ AL L M++ +P V
Sbjct: 232 LFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDP--VAMIIGLKA 289
Query: 291 XXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
++ G+ IH + Y G N+ N+LI MYS+C L A VF T S+ +W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 351 SAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG 410
+++ISG A +EA EM G +P+ T +L C+ + G F ++
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 411 EFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGE 470
+ +VD+ ++G + A +V M+ K D + +L I G+ GE
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSL-----IDGYGNQGE 463
Query: 471 RVIERLIELKAQEAG---DYVLLLNIYSSAGHWEKVAE-VRTLMKEKAIQTTPGC----- 521
+ + + +G D+V ++ + S+ H + V E R MK + C
Sbjct: 464 GGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFS 523
Query: 522 CTIELKG-----VVHEFVVDDVSHKRKGEIYETL 550
C ++L G + ++ ++ +K G + TL
Sbjct: 524 CMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 2/229 (0%)
Query: 180 SSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM 239
S++ + +C+ + GVQVH + G + S+L+ ++ YS ++A + +
Sbjct: 45 SAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENS 104
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
+ WNV+I+ +N + ++ + M S PD T + F
Sbjct: 105 DILHPLPWNVLIASYAKNELFEEVIAAYKRM--VSKGIRPDAFTYPSVLKACGETLDVAF 162
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
G +H I Y ++ + N+LI+MY R + A +F + VSW+A+I+ A
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM 408
G EA E F++M G+ T+ + C +G + RM
Sbjct: 223 EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRM 271
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 203/390 (52%), Gaps = 2/390 (0%)
Query: 132 RRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRF 191
RR F I +P VS +N M+ YS + ++ + +R M+ + + + + S + SC R
Sbjct: 370 RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL 429
Query: 192 LDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDE-MPQRDTVAWNVM 250
+ GG Q+H V + +S +++ ++ +YS+C K + + +FD+ + + D WN M
Sbjct: 430 RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSM 489
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
IS N AL LF M T+ C P++ + SL G + H +++
Sbjct: 490 ISGFRHNMLDTKALILFRRMHQTAVLC-PNETSFATVLSSCSRLCSLLHGRQFHGLVVKS 548
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
GY + +L MY +CG +D A + F K+ V W+ MI G NG G EA+ +
Sbjct: 549 GYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLY 608
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
+M G +PD TF VL+ACSHSGLV+ G+ M GI P + HY C+VD LGR
Sbjct: 609 RKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGR 668
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLL 490
AG L+ A ++ K +W LL +CR+HG V+L RV E+L+ L Q + YVLL
Sbjct: 669 AGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLL 728
Query: 491 LNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
N YSS W+ A ++ LM + + TPG
Sbjct: 729 SNTYSSLRQWDDSAALQGLMNKNRVHKTPG 758
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 152/332 (45%), Gaps = 17/332 (5%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
R +VS +N MI +K L +Y+ M G + + + + +C + LD V G++
Sbjct: 101 RDVVS-WNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMR 159
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCR-KGDDACKVFDEMPQRDTVAWNVMISCCVRNN 258
H K G + + A++ +Y++C D +VF+ + Q + V++ +I R N
Sbjct: 160 CHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLAREN 219
Query: 259 RTRDALSLFDVM----QSTSNKCEPDDVTXXXXXXXXXXXNSL---EFGERIHNYIMERG 311
+ +A+ +F +M + C + ++ + + E G++IH + G
Sbjct: 220 KVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLG 279
Query: 312 YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
+GG ++L+NSL+ +Y++ ++ A +F P +VVSW+ MI G +++E
Sbjct: 280 FGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLT 339
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
M+ G +P++ T VL AC SG V+ G F + P++ + M+
Sbjct: 340 RMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI-----PQPSVSAWNAMLSGYSNY 394
Query: 432 GLLDKAYEVITTMA---VKPDPTIWRTLLGAC 460
++A M +KPD T +L +C
Sbjct: 395 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 148/382 (38%), Gaps = 79/382 (20%)
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGD------------------------ 230
+ G +H + + G +SD+ L ++DLY +C GD
Sbjct: 23 LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 231 -------DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVT 283
+AC+VFD MP+RD V+WN MIS VR AL ++ M + P T
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM--VCDGFLPSRFT 140
Query: 284 XXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG-CLDKAYEVFMGT 342
FG R H ++ G I + N+L++MY++CG +D VF
Sbjct: 141 LASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL 200
Query: 343 PNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGM 402
+ VS++A+I GLA EA++ F M G++ D + +LS + D
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 260
Query: 403 SFFDRMIGE-------------------------------------FGITP--NIHHYGC 423
+ +G+ F P N+ +
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 424 MVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK 480
M+ G+ DK+ E +T M +P+ ++LGAC G V G R+ + +
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-- 378
Query: 481 AQEAGDYVLLLNIYSSAGHWEK 502
+ +L+ YS+ H+E+
Sbjct: 379 -PSVSAWNAMLSGYSNYEHYEE 399
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 50/341 (14%)
Query: 72 FPPSH--KEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPI 129
F PS V+S V ++ H V T L + V LS A G + D
Sbjct: 134 FLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD-- 191
Query: 130 YSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIA------ANPLSSSF 183
Y R FE +++P + +I + + + + ++R M +G+ +N LS S
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Query: 184 AVKSCIRFLDIVG---GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP 240
+ C +I G G Q+HC + G D L +++++Y++ + + A +F EMP
Sbjct: 252 PREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP 311
Query: 241 QRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFG 300
+ + V+WN+MI + R+ ++ M+ + +P++VT +E G
Sbjct: 312 EVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSG--FQPNEVTCISVLGACFRSGDVETG 369
Query: 301 ERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVN 360
RI F P SV +W+AM+SG +
Sbjct: 370 RRI-----------------------------------FSSIPQPSVSAWNAMLSGYSNY 394
Query: 361 GYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEG 401
+ +EAI F +MQ ++PD T + +LS+C+ ++ G
Sbjct: 395 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 218/405 (53%), Gaps = 11/405 (2%)
Query: 125 LQDP--IYSRRFF-EQINRPIVSHFNTMIRAYSMSDSPQKG-LYLYRDMRRRGIAANPLS 180
L +P + S+RFF E R + F+T + + + G L L + + + + LS
Sbjct: 91 LHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLS 150
Query: 181 SSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP 240
F + + IR ++ + +F + Q D + ++D + R+ A ++FD MP
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 241 QRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFG 300
RD V+WN +IS + N R+A+ LFD M + K PD+V + G
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK--PDNVAIVSTLSACAQSGDWQKG 268
Query: 301 ERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVN 360
+ IH+Y + L+ L+ Y++CG +D A E+F +K++ +W+AMI+GLA++
Sbjct: 269 KAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 361 GYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHH 420
G G+ ++ F +M GI+PD TF VL CSHSGLVDE + FD+M + + + H
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKH 388
Query: 421 YGCMVDLLGRAGLLDKAYEVITTM----AVKPDPTIWRTLLGACRIHGHVTLGERVIERL 476
YGCM DLLGRAGL+++A E+I M + W LLG CRIHG++ + E+ R+
Sbjct: 389 YGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRV 448
Query: 477 IELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLM-KEKAIQTTPG 520
L ++ G Y +++ +Y++A WE+V +VR ++ ++K ++ G
Sbjct: 449 KALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVG 493
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 226/412 (54%), Gaps = 12/412 (2%)
Query: 114 HFLSRVA--LSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRR 171
HF+S L G ++P+ +RR F+++ P V + ++ A+S +D ++ L L+ M R
Sbjct: 198 HFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHR 257
Query: 172 RGIAANPLSSSFA--VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKG 229
G P S+F + +C + G ++H + +G S+ ++ ++++D+Y +C
Sbjct: 258 -GKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 230 DDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXX 289
+A +VF+ M ++++V+W+ ++ +N A+ +F M+ E D
Sbjct: 317 REARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME------EKDLYCFGTVLK 370
Query: 290 XXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVS 349
++ G+ IH + RG G + + ++LI +Y + GC+D A V+ +++++
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT 430
Query: 350 WSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI 409
W+AM+S LA NG G+EA+ F +M + GI+PD +F +L+AC H+G+VDEG ++F M
Sbjct: 431 WNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMA 490
Query: 410 GEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVT-L 468
+GI P HY CM+DLLGRAGL ++A ++ + D ++W LLG C + + +
Sbjct: 491 KSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRV 550
Query: 469 GERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
ER+ +R++EL+ + YVLL N+Y + G +R LM + + T G
Sbjct: 551 AERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVG 602
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 209/464 (45%), Gaps = 23/464 (4%)
Query: 74 PSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRR 133
P ++ T V H +Q HAH+V + L D V LS GP +RR
Sbjct: 61 PKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRE--TRR 118
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
F+ + +M+ Y K L ++ +M G+ AN + S AVK+C +
Sbjct: 119 VFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGE 178
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
+ G H V G + + + + + LY R+ DA +VFDEMP+ D + W ++S
Sbjct: 179 VRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSA 238
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+N+ +AL LF M PD T L+ G+ IH ++ G G
Sbjct: 239 FSKNDLYEEALGLFYAMHRGKGLV-PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIG 297
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
+ + +SL+ MY +CG + +A +VF G K+ VSWSA++ G NG ++AIE F EM
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI--GEFGITPNIHHYGCMVDLLGRA 431
+ D F VL AC+ V G + + G FG N+ ++DL G++
Sbjct: 358 E----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG---NVIVESALIDLYGKS 410
Query: 432 GLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL-KAQEAGDYVLL 490
G +D A V + M+++ T W +L A +G GE + ++ K DY+
Sbjct: 411 GCIDSASRVYSKMSIRNMIT-WNAMLSALAQNGR---GEEAVSFFNDMVKKGIKPDYISF 466
Query: 491 LNIYSSAGHWEKVAEVRT--LMKEKAIQTTPGC----CTIELKG 528
+ I ++ GH V E R ++ K+ PG C I+L G
Sbjct: 467 IAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLG 510
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 11/313 (3%)
Query: 174 IAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKG-DDA 232
I A P + +++C + + G+Q H +V K G ++D + +++ LY + G +
Sbjct: 57 IPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRET 116
Query: 233 CKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXX 292
+VFD +D ++W M+S V AL +F ++ S + ++ T
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVF--VEMVSFGLDANEFTLSSAVKACS 174
Query: 293 XXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSA 352
+ G H ++ G+ +S++L +Y A VF P V+ W+A
Sbjct: 175 ELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTA 234
Query: 353 MISGLAVNGYGKEAIEAFEEMQR-IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGE 411
++S + N +EA+ F M R G+ PD TF VL+AC + + +G ++I
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 412 FGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA-CRIHGHVTLGE 470
GI N+ ++D+ G+ G + +A +V M+ K + W LLG C+ H E
Sbjct: 295 -GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEH----E 348
Query: 471 RVIERLIELKAQE 483
+ IE E++ ++
Sbjct: 349 KAIEIFREMEEKD 361
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/495 (31%), Positives = 247/495 (49%), Gaps = 47/495 (9%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
++H + V L D VS + A G ++ I + F E R +VS +N +I +Y
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIE--ITHKVFDEMPQRDVVS-WNGLISSYV 123
Query: 155 MSDSPQKGLYLYRDMRRRG---IAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQS 211
+ + + +++ M + + S+ + S ++ L+I G +++ V + S
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEI--GERIYRFVVTEFEMS 181
Query: 212 DSLLLTAVMDLYSQCRKGDDACKVFDEM-------------------------------P 240
+ A++D++ +C D A VFD M P
Sbjct: 182 -VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 241 QRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFG 300
+D V W M++ V+ NR +AL LF MQ+ + PD+ +LE G
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR--PDNFVLVSLLTGCAQTGALEQG 298
Query: 301 ERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVN 360
+ IH YI E + +L+ MY++CGC++ A EVF + SW+++I GLA+N
Sbjct: 299 KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMN 358
Query: 361 GYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHH 420
G A++ + EM+ +G+R D TF VL+AC+H G V EG F M + P H
Sbjct: 359 GMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEH 418
Query: 421 YGCMVDLLGRAGLLDKAYEVITTMAVKPDPT---IWRTLLGACRIHGHVTLGERVIERLI 477
C++DLL RAGLLD+A E+I M + D T ++ +LL A R +G+V + ERV E+L
Sbjct: 419 CSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLE 478
Query: 478 ELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDD 537
+++ ++ + LL ++Y+SA WE V VR MK+ I+ PGC +IE+ GV HEF+V D
Sbjct: 479 KVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGD 538
Query: 538 --VSHKRKGEIYETL 550
+SH + EI L
Sbjct: 539 DLLSHPKMDEINSML 553
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 221/456 (48%), Gaps = 54/456 (11%)
Query: 138 INRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGG 197
+ P + +N M+++ + S K L L+ ++R +G+ + + +KS R ++ G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRN 257
+VH K G + DS + ++M +Y+ K + KVFDEMPQRD V+WN +IS V N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 258 NRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAIN 317
R DA+ +F M SN + D+ T +LE GERI+ +++ + ++
Sbjct: 126 GRFEDAIGVFKRMSQESN-LKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVR 183
Query: 318 LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLA------------------- 358
+ N+L+ M+ +CGCLDKA VF +K+V W++M+ G
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 359 -------VNGYGK-----EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFD 406
+NGY + EA+E F MQ GIRPD+ +L+ C+ +G +++G +
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIH 302
Query: 407 RMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHV 466
I E +T + +VD+ + G ++ A EV + + D W +L+ ++G
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNG-- 359
Query: 467 TLGERVIERLIELKAQEAG---DYVLLLNIYSSAGHWEKVAEVRTL---MKEK-AIQ-TT 518
+ R ++ E+ + G D + + + ++ H VAE R + M E+ +Q +
Sbjct: 360 -MSGRALDLYYEM--ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKS 416
Query: 519 PGC-CTIEL---KGVVHEFVVDDVSHKRKGEIYETL 550
C C I+L G++ E +++ K +GE ETL
Sbjct: 417 EHCSCLIDLLCRAGLLDE--AEELIDKMRGESDETL 450
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 233/473 (49%), Gaps = 31/473 (6%)
Query: 69 ISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDP---AVSLHFLSRVALSGPL 125
++S S + ++ I +L QIHA I+ L H + LH S V LS
Sbjct: 1 MTSPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLS--- 57
Query: 126 QDPIYSRRFFEQINRPIVSHFNTMIRA-YSMSDSPQKGLY--LYRD-MRRRGIAANPLSS 181
Y+ QI P V +NT+I + S +S Q L LY + R P +
Sbjct: 58 ----YALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRP--N 111
Query: 182 SFAVKSCIRFLDIVG-----GVQVHCNVFK--DGHQSDSLLLTAVMDLYSQCRKGDDACK 234
F S + G +H +V K + D + A++ Y+ C K +A
Sbjct: 112 EFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARS 171
Query: 235 VFDEMPQRDTVAWNVMISCCVRNNRT---RDALSLFDVMQSTSNKCEPDDVTXXXXXXXX 291
+F+ + + D WN +++ + + L LF MQ P++++
Sbjct: 172 LFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ-----VRPNELSLVALIKSC 226
Query: 292 XXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWS 351
G H Y+++ + SLI +YS+CGCL A +VF + V ++
Sbjct: 227 ANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYN 286
Query: 352 AMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGE 411
AMI GLAV+G+G+E IE ++ + G+ PD TF +SACSHSGLVDEG+ F+ M
Sbjct: 287 AMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAV 346
Query: 412 FGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGER 471
+GI P + HYGC+VDLLGR+G L++A E I M VKP+ T+WR+ LG+ + HG GE
Sbjct: 347 YGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEI 406
Query: 472 VIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTI 524
++ L+ L+ + +G+YVLL NIY+ W V + R LMK+ + +PG T+
Sbjct: 407 ALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 214/397 (53%), Gaps = 5/397 (1%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+RR F + + + + MI Y+ + S + L L++ M+ I N ++ + + C
Sbjct: 296 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGL 355
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
++ G VH K G D+ + A++ +Y++C + DA VF+ ++D VAWN +
Sbjct: 356 IENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
IS +N +AL LF M S S P+ VT SL G +H Y ++
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSES--VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKL 472
Query: 311 GY--GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
G+ ++++ +L+ Y++CG A +F K+ ++WSAMI G G ++E
Sbjct: 473 GFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLE 532
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
FEEM + +P++ TFT +LSAC H+G+V+EG +F M ++ TP+ HY CMVD+L
Sbjct: 533 LFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDML 592
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYV 488
RAG L++A ++I M ++PD + L C +H LGE VI+++++L +A YV
Sbjct: 593 ARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYV 652
Query: 489 LLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE 525
L+ N+Y+S G W + EVR LMK++ + G T+E
Sbjct: 653 LVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 197/466 (42%), Gaps = 38/466 (8%)
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYSR--------RFFEQINRPIVSHFNTMIRAYSMSD 157
+H V + V L+G L +Y++ + F I V + +MI Y +D
Sbjct: 164 IHCQLVKVPSFDNVVLTGLLD--MYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKND 221
Query: 158 SPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLT 217
++GL L+ MR + N + + +C + + G H + K G + S L+T
Sbjct: 222 LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT 281
Query: 218 AVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKC 277
+++D+Y +C +A +VF+E D V W MI N +ALSLF M+ K
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK- 340
Query: 278 EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYE 337
P+ VT +LE G +H ++ G N++N+L+ MY++C A
Sbjct: 341 -PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT-NVANALVHMYAKCYQNRDAKY 398
Query: 338 VFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGL 397
VF K +V+W+++ISG + NG EA+ F M + P+ T + SAC+ G
Sbjct: 399 VFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGS 458
Query: 398 VDEGMSF--FDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRT 455
+ G S + +G F + ++H ++D + G A + T+ K T W
Sbjct: 459 LAVGSSLHAYSVKLG-FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTIT-WSA 516
Query: 456 LLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKE--K 513
++G G + E + LK Q+ + +I S+ GH V E + K
Sbjct: 517 MIGGYGKQGDTIGSLELFEEM--LKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYK 574
Query: 514 AIQTTPG----CCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINK 555
TP C +++ R GE+ + LD I K
Sbjct: 575 DYNFTPSTKHYTCMVDMLA-------------RAGELEQALDIIEK 607
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 154/307 (50%), Gaps = 9/307 (2%)
Query: 93 LLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRA 152
L Q H + L+ D +++ +S G +D +R F+QI P + M+R
Sbjct: 60 LRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKD---ARLVFDQIPEPDFYLWKVMLRC 116
Query: 153 YSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSD 212
Y ++ + + LY + + G + + S A+K+C D+ G ++HC + K D
Sbjct: 117 YCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKV-PSFD 175
Query: 213 SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
+++LT ++D+Y++C + A KVF+++ R+ V W MI+ V+N+ + L LF+ M+
Sbjct: 176 NVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR- 234
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
N ++ T ++L G+ H +++ G + L SL+ MY +CG +
Sbjct: 235 -ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 293
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
A VF + +V W+AMI G NG EA+ F++M+ + I+P+ T VLS C
Sbjct: 294 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Query: 393 SHSGLVD 399
GL++
Sbjct: 354 ---GLIE 357
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 131/284 (46%), Gaps = 7/284 (2%)
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNN 258
Q H + +G D + T ++ LY DA VFD++P+ D W VM+ C N
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 259 RTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINL 318
+ + + L+D++ + DD+ L+ G++IH +++ + L
Sbjct: 122 ESVEVVKLYDLLMKHGFR--YDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL 179
Query: 319 SNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGI 378
+ L+ MY++CG + A++VF ++VV W++MI+G N +E + F M+ +
Sbjct: 180 T-GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238
Query: 379 RPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAY 438
++ T+ ++ AC+ + +G F ++ + GI + ++D+ + G + A
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKWFHGCLV-KSGIELSSCLVTSLLDMYVKCGDISNAR 297
Query: 439 EVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERL--IELK 480
V + D +W ++ +G V + +++ +E+K
Sbjct: 298 RVFNEHS-HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 219/439 (49%), Gaps = 14/439 (3%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+H +V T + VS L G + Y R FE I + V + ++I +
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVN---YGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNV--------FKD 207
++ + +R+M+ G+ AN + +C R DIV G H + F+
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQS 245
Query: 208 GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLF 267
+ +L T+++D+Y++C A +FD MP+R V+WN +I+ +N +AL +F
Sbjct: 246 KVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMF 305
Query: 268 DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYS 327
M PD VT + G+ IH Y+ + G+ + +L+ MY+
Sbjct: 306 LDMLDLG--IAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 363
Query: 328 RCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG-IRPDDQTFT 386
+ G + A + F K ++W+ +I GLA +G+G EA+ F+ MQ G PD T+
Sbjct: 364 KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYL 423
Query: 387 GVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAV 446
GVL ACSH GLV+EG +F M G+ P + HYGCMVD+L RAG ++A ++ TM V
Sbjct: 424 GVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV 483
Query: 447 KPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEV 506
KP+ IW LL C IH ++ L +R+ + E + +G YVLL NIY+ AG W V +
Sbjct: 484 KPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLI 543
Query: 507 RTLMKEKAIQTTPGCCTIE 525
R MK K + G ++E
Sbjct: 544 RESMKSKRVDKVLGHSSVE 562
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 211/446 (47%), Gaps = 15/446 (3%)
Query: 76 HKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGP-LQDPIYSRRF 134
H + ++S +++ L Q+H ++ ++++ + + L L + P + Y+R
Sbjct: 5 HYKPILSQLENCRSLVELNQLHGLMIKSSVIRN-VIPLSRLIDFCTTCPETMNLSYARSV 63
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDI 194
FE I+ P V +N+MIR YS S +P K L Y++M R+G + + + + +K+C DI
Sbjct: 64 FESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDI 123
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCC 254
G VH V K G + + + T ++ +Y C + + +VF+++PQ + VAW +IS
Sbjct: 124 QFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGF 183
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY-- 312
V NNR DA+ F MQ SN + ++ + G+ H ++ G+
Sbjct: 184 VNNNRFSDAIEAFREMQ--SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDP 241
Query: 313 ------GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEA 366
G + L+ SLI MY++CG L A +F G P +++VSW+++I+G + NG +EA
Sbjct: 242 YFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEA 301
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
+ F +M +GI PD TF V+ A G G S + + G + +V+
Sbjct: 302 LCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQS-IHAYVSKTGFVKDAAIVCALVN 360
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGD 486
+ + G + A + + K D W ++ HGH + +R+ E K D
Sbjct: 361 MYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGHGNEALSIFQRMQE-KGNATPD 418
Query: 487 YVLLLNIYSSAGHWEKVAEVRTLMKE 512
+ L + + H V E + E
Sbjct: 419 GITYLGVLYACSHIGLVEEGQRYFAE 444
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 232/438 (52%), Gaps = 9/438 (2%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
F R +VS +NTMI A+ + +GL L +M+++G + ++ + + + +
Sbjct: 376 FLSMRERDVVS-WNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDE--MPQRDTVAWNVMI 251
G Q H + + G Q + + + ++D+YS+ + K+F+ +RD WN MI
Sbjct: 435 KEIGKQTHAFLIRQGIQFEGMN-SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG 311
S +N T +F M P+ VT S++ G+++H + + +
Sbjct: 494 SGYTQNGHTEKTFLVFRKM--LEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 312 YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
+ ++++L+ MYS+ G + A ++F T ++ V+++ MI G +G G+ AI F
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
MQ GI+PD TF VLSACS+SGL+DEG+ F+ M + I P+ HY C+ D+LGR
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 432 GLLDKAYEVITTMAVKPD-PTIWRTLLGACRIHGHVTLGERVIERLIELKAQE--AGDYV 488
G +++AYE + + + + +W +LLG+C++HG + L E V ERL + + +G V
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEV 731
Query: 489 LLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYE 548
LL N+Y+ W+ V +VR M+EK ++ G IE+ G V+ FV D H EIY+
Sbjct: 732 LLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYD 791
Query: 549 TLDDINKQLKIAGYVVEL 566
+D + K ++ ++ L
Sbjct: 792 VIDGLAKDMRGDSFLTTL 809
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 191/422 (45%), Gaps = 44/422 (10%)
Query: 82 STIKSVSQKPHLLQ---IHAHIV-----CTTLVHDPAVSLHFLSRVALSGPLQDPIYSRR 133
ST+K+ ++ +L +H H++ + +VH+ ++++ A D + R+
Sbjct: 112 STLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVV--RK 169
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLS-----SSFAVKSC 188
F+ + R V +NT+I Y + + + M R + +P+S + ++
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
I+ ++ G+ + D + D ++++ + +Y++ + + +VFD +R+ WN
Sbjct: 230 IKKANVFYGLMLK---LGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
MI V+N+ +++ LF + S + D+VT +E G + H ++
Sbjct: 287 TMIGVYVQNDCLVESIELF-LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVS 345
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
+ I + NSL+ MYSRCG + K++ VF+ + VVSW+ MIS NG E +
Sbjct: 346 KNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLM 405
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACS-----------HSGLVDEGMSFFDRMIGEFGITPN 417
EMQ+ G + D T T +LSA S H+ L+ +G+ F
Sbjct: 406 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF-----------EG 454
Query: 418 IHHYGCMVDLLGRAGLLDKAYEVITTMA-VKPDPTIWRTLLGACRIHGHVTLGERVIERL 476
++ Y ++D+ ++GL+ + ++ + D W +++ +GH V ++
Sbjct: 455 MNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM 512
Query: 477 IE 478
+E
Sbjct: 513 LE 514
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 178/398 (44%), Gaps = 25/398 (6%)
Query: 118 RVALSGPLQD--PIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIA 175
R LS QD P +R+ F+ I +P +NT+I + ++ P + L Y M++
Sbjct: 43 RSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPF 102
Query: 176 AN--PLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDAC 233
N + S +K+C ++ G VHC++ + S ++ ++M++Y C D
Sbjct: 103 TNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCF 162
Query: 234 ------KVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXX 287
KVFD M +++ VAWN +IS V+ R +A F +M K P V+
Sbjct: 163 EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVK--PSPVSFVNV 220
Query: 288 XXXXXXXNSLEFGERIHNYIMERG--YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK 345
S++ + +++ G Y + + +S I+MY+ G ++ + VF +
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVER 280
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG---IRPDDQTFTGVLSACSHSGLVDEGM 402
++ W+ MI N E+IE F ++ IG I D+ T+ SA S V+ G
Sbjct: 281 NIEVWNTMIGVYVQNDCLVESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGR 338
Query: 403 SFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRI 462
F + F P + MV + R G + K++ V +M + D W T++ A
Sbjct: 339 QFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMRER-DVVSWNTMISAFVQ 396
Query: 463 HGHVTLGERVIERLIELKAQEAG-DYVLLLNIYSSAGH 499
+G L + + + E++ Q DY+ + + S+A +
Sbjct: 397 NG---LDDEGLMLVYEMQKQGFKIDYITVTALLSAASN 431
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 224/430 (52%), Gaps = 5/430 (1%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+H + + + LV D V + + G L++ S + F+ I + + +MI ++
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEE---SYKLFQGIPFKDNACWASMISGFN 527
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
++ + L+ +M G + + + + + C + G ++H + G
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD 587
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
L +A++++YS+C A +V+D +P+ D V+ + +IS ++ +D LF M +
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
+ ++ +SL G ++H YI + G ++ +SL+ MYS+ G +D
Sbjct: 648 FTMDSFAISSILKAAALSDESSL--GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD 705
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
+ F +++W+A+I+ A +G EA++ + M+ G +PD TF GVLSACSH
Sbjct: 706 CCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH 765
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
GLV+E + M+ ++GI P HY CMVD LGR+G L +A I M +KPD +W
Sbjct: 766 GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWG 825
Query: 455 TLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKA 514
TLL AC+IHG V LG+ ++ IEL+ +AG Y+ L NI + G W++V E R LMK
Sbjct: 826 TLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTG 885
Query: 515 IQTTPGCCTI 524
+Q PG ++
Sbjct: 886 VQKEPGWSSV 895
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 159/337 (47%), Gaps = 10/337 (2%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDI 194
F +I P V + M+ Y+ S+ L ++++MR G+ N + + + +C R +
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP--QRDTVAWNVMIS 252
QVH VFK G DS + A++ +YS+ D + +VF+++ QR + NVMI+
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMIT 426
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
++ + A+ LF M + + V + L G+++H Y ++ G
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL-----DCLNLGKQVHGYTLKSGL 481
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+ + +SL +YS+CG L+++Y++F G P K W++MISG GY +EAI F E
Sbjct: 482 VLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M G PD+ T VL+ CS + G + GI + +V++ + G
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL-RAGIDKGMDLGSALVNMYSKCG 600
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLG 469
L A +V + + DP +L+ HG + G
Sbjct: 601 SLKLARQVYDRLP-ELDPVSCSSLISGYSQHGLIQDG 636
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 145/307 (47%), Gaps = 7/307 (2%)
Query: 96 IHAHIVCTTLV-HDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
+ AH++ L+ D ++ LS + SG + D + + F+ I +P V N MI Y
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMAD---AAKLFDTIPQPDVVSCNIMISGYK 126
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
++ L + M G AN +S + +C + V C+ K G+ +
Sbjct: 127 QHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV 186
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ +A++D++S+ + +DA KVF + + WN +I+ +RN LF M
Sbjct: 187 VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGF 246
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
K PD T L FG+ + +++ G + + +++ +Y++CG + +
Sbjct: 247 QK--PDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAE 303
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
A EVF PN SVVSW+ M+SG + A+E F+EM+ G+ ++ T T V+SAC
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 395 SGLVDEG 401
+V E
Sbjct: 364 PSMVCEA 370
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
+ L+ SL++ YS G + A ++F P VVS + MISG + +E++ F +M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 376 IGIRPDDQTFTGVLSACS--------------------------HSGLVD---EGMSFFD 406
+G ++ ++ V+SACS S L+D + + F D
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 407 RM-IGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAV---KPDPTIWRTLLGACRI 462
+ ++ N++ + ++ R +++ M V KPD + ++L AC
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 463 HGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEV 506
+ G+ V R+I+ A++ ++++Y+ GH + EV
Sbjct: 264 LEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEV 307
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 237/452 (52%), Gaps = 14/452 (3%)
Query: 69 ISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDP 128
IS P ++ T S+ H +++H I L ++ +S + A G +
Sbjct: 87 ISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAE-- 144
Query: 129 IYSRRFFEQINRPIVSHF--NTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK 186
+ F+++++ S F N++I Y+ + + LY M G+ + + +K
Sbjct: 145 -VAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 187 SCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVA 246
+C + G +H ++ K+G D +L A++ +Y++C A VFD +P +D V+
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS 263
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
WN M++ + + +AL +F +M N EPD V S + G ++H +
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLM--VQNGIEPDKVAISSVLARVL---SFKHGRQLHGW 318
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEA 366
++ RG ++++N+LI +YS+ G L +A +F + VSW+A+IS + N G
Sbjct: 319 VIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG--- 375
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
++ FE+M R +PD TF VLS C+++G+V++G F M E+GI P + HY CMV+
Sbjct: 376 LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVN 435
Query: 427 LLGRAGLLDKAYEVITT-MAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG 485
L GRAG++++AY +I M ++ PT+W LL AC +HG+ +GE +RL EL+
Sbjct: 436 LYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEH 495
Query: 486 DYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
++ LL+ IYS A E V VR +M ++ ++T
Sbjct: 496 NFELLIRIYSKAKRAEDVERVRQMMVDRGLET 527
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 225/462 (48%), Gaps = 39/462 (8%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
+IHA I+ T D +S+ L G L Y+R+ F+++ +P +S +N MI Y
Sbjct: 55 KIHADIIKTGFQPDLNISIKLLILHLKCGCLS---YARQVFDELPKPTLSAYNYMISGYL 111
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC-----IRFLDIVGGVQVHCNVFKDGH 209
++ L L + M G A+ + S +K+ L VH + K
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFD- 268
+ D +L+TA++D Y + K + A VF+ M + V MIS + DA +F+
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 269 -----------VMQSTSNKCE------------------PDDVTXXXXXXXXXXXNSLEF 299
+++ S E P+ T S E
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEV 291
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
G+++H IM+ G I + +SL+ MY++CG ++ A VF K+V SW++MI G
Sbjct: 292 GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGK 351
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
NG +EA+E F M+ I P+ TF G LSACSHSGLVD+G F+ M ++ + P +
Sbjct: 352 NGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKME 411
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
HY C+VDL+GRAG L+KA+E M +PD IW LL +C +HG+V L L +L
Sbjct: 412 HYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKL 471
Query: 480 KA-QEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
A + G Y+ L N+Y+S W+ V+++R +MK + I T G
Sbjct: 472 NADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIG 513
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%)
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
G++IH I++ G+ +N+S L+ ++ +CGCL A +VF P ++ +++ MISG
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG 396
+G KE + + M G + D T + VL A + G
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRG 149
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 148/437 (33%), Positives = 222/437 (50%), Gaps = 16/437 (3%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
IH + L D V+ + A G ++ +++ F++I + +++ Y
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMES---AQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR-FLDIVG----GVQVHCNVFKDGHQ 210
+ L+ MR G+A + L+ VK+C F VG GV + F D Q
Sbjct: 188 YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIR-RSFID--Q 244
Query: 211 SDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM 270
SD L +++D+Y +CR D+A K+F+ R+ V W +IS + R +A LF M
Sbjct: 245 SD-YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG-GAINLSNSLIAMYSRC 329
S P+ T SL G+ +H Y++ G A+N + S I MY+RC
Sbjct: 304 LRES--ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT-SFIDMYARC 360
Query: 330 GCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVL 389
G + A VF P ++V+SWS+MI+ +NG +EA++ F +M+ + P+ TF +L
Sbjct: 361 GNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLL 420
Query: 390 SACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPD 449
SACSHSG V EG F+ M ++G+ P HY CMVDLLGRAG + +A I M VKP
Sbjct: 421 SACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPM 480
Query: 450 PTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTL 509
+ W LL ACRIH V L + E+L+ ++ +++ YVLL NIY+ AG WE V VR
Sbjct: 481 ASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRK 540
Query: 510 MKEKAIQTTPGCCTIEL 526
M K + G E+
Sbjct: 541 MGIKGYRKHVGQSATEV 557
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 204/452 (45%), Gaps = 40/452 (8%)
Query: 72 FPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDP-IY 130
P + +++ + H Q+HA ++ +H F V L L + I
Sbjct: 2 LPVNRARALLTILSQAKTLNHTQQVHAKVI----IHG------FEDEVVLGSSLTNAYIQ 51
Query: 131 SRRF------FEQI-----NRPIVSHFNTMIRAYSMSDSP--QKGLYLYRDMRRRGIAAN 177
S R F +I NR +NT++ YS S + L LY MRR +
Sbjct: 52 SNRLDFATSSFNRIPCWKRNR---HSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVD 108
Query: 178 PLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFD 237
+ FA+K+C+ + G+ +H K+G D + +++++Y+Q + A KVFD
Sbjct: 109 SFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFD 168
Query: 238 EMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSL 297
E+P R++V W V++ ++ ++ + LF +M+ T D +T +
Sbjct: 169 EIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTG--LALDALTLICLVKACGNVFAG 226
Query: 298 EFGERIHNYIMERGYGGAIN-LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISG 356
+ G+ +H + R + + L S+I MY +C LD A ++F + +++VV W+ +ISG
Sbjct: 227 KVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISG 286
Query: 357 LAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITP 416
A EA + F +M R I P+ T +L +CS G + G S MI GI
Sbjct: 287 FAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEM 345
Query: 417 NIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI--WRTLLGACRIHGHVTLGERVIE 474
+ ++ +D+ R G + A V M P+ + W +++ A I+G L E ++
Sbjct: 346 DAVNFTSFIDMYARCGNIQMARTVFDMM---PERNVISWSSMINAFGING---LFEEALD 399
Query: 475 RLIELKAQE-AGDYVLLLNIYSSAGHWEKVAE 505
++K+Q + V +++ S+ H V E
Sbjct: 400 CFHKMKSQNVVPNSVTFVSLLSACSHSGNVKE 431
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 223/421 (52%), Gaps = 8/421 (1%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPI---VSHFNTMIR 151
Q+H +V + L P + + G L IY+ F Q + V+ +N+M+
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSL---IYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 152 AYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQS 211
+ +++ + L+L + + + + + S A+K CI ++++ G+QVH V G++
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 212 DSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQ 271
D ++ + ++DL++ DA K+F +P +D +A++ +I CV++ A LF +
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
+ D SL +G++IH +++GY + +L+ MY +CG
Sbjct: 436 KLG--LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 332 LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
+D +F G + VVSW+ +I G NG +EA F +M IGI P+ TF G+LSA
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSA 553
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
C HSGL++E S + M E+G+ P + HY C+VDLLG+AGL +A E+I M ++PD T
Sbjct: 554 CRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKT 613
Query: 452 IWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
IW +LL AC H + L + E+L++ + Y L N Y++ G W+++++VR K
Sbjct: 614 IWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAK 673
Query: 512 E 512
+
Sbjct: 674 K 674
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 194/473 (41%), Gaps = 62/473 (13%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
I AH++ + + ++ + +S L D + + F++++ + + TM+ Y+
Sbjct: 27 IQAHVIKQGISQNVFIANNVISMYVDFRLLSD---AHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 156 SDSPQKGLYLYRDM-RRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
P K + LYR M AAN S +K+C DI G+ V+ + K+ + D +
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
L+ +V+D+Y + + +A F E+ + + +WN +IS + +A++LF M +
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203
Query: 275 ------------NKCEP----------------DDVTXXXXXXXXXXXNSLEFGERIHNY 306
+K P D L G+++H
Sbjct: 204 VVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCC 263
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTP---NKSVVSWSAMISGLAVNGYG 363
+++ G + ++LI MYS CG L A +VF N SV W++M+SG +N
Sbjct: 264 VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSAC-----------SHSGLVDEGMSFFDRMIGEF 412
+ A+ ++ + + D T +G L C HS +V G D ++G
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE-LDYIVGSI 382
Query: 413 GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERV 472
+VDL G + A+++ + K D + L+ C G +L +
Sbjct: 383 -----------LVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVKSGFNSLAFYL 430
Query: 473 IERLIELKAQEAGDYVL--LLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCT 523
LI+L +A +++ +L + SS ++ L +K ++ P T
Sbjct: 431 FRELIKL-GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT 482
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 118/300 (39%), Gaps = 36/300 (12%)
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR 256
G + +V K G + + V+ +Y R DA KVFDEM +R+ V W M+S
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+ + A+ L+ M + + ++ ++ G ++ I + G +
Sbjct: 84 DGKPNKAIELYRRMLDSEEEA-ANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDV 142
Query: 317 NLSNSLIAM-------------------------------YSRCGCLDKAYEVFMGTPNK 345
L NS++ M Y + G +D+A +F P
Sbjct: 143 VLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQP 202
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
+VVSW+ +ISG G A+E MQR G+ D L ACS GL+ G
Sbjct: 203 NVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLH 261
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVI--TTMAVKPDPTIWRTLLGACRIH 463
++ + G+ + ++D+ G L A +V +AV +W ++L I+
Sbjct: 262 CCVV-KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLIN 320
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 213/419 (50%), Gaps = 30/419 (7%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
SR F++ + V +N+MI Y ++ + L L+ +MR + + + + +CI
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIG 330
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
+ G Q+HC+ K G D ++ + ++D+YS+C +ACK+F E+ DT+ N M
Sbjct: 331 LGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSM 390
Query: 251 ISCCVRNNRTRDALSLFDVMQSTS-------------NKCE----------------PDD 281
I R DA +F+ +++ S N C D+
Sbjct: 391 IKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDE 450
Query: 282 VTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMG 341
V+ +SLE GE++ G +S+SLI +Y +CG ++ VF
Sbjct: 451 VSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDT 510
Query: 342 TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEG 401
V W++MISG A NG G EAI+ F++M GIRP TF VL+AC++ GLV+EG
Sbjct: 511 MVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEG 570
Query: 402 MSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACR 461
F+ M + G P+ H+ CMVDLL RAG +++A ++ M D ++W ++L C
Sbjct: 571 RKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCV 630
Query: 462 IHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
+G+ +G++ E++IEL+ + + YV L I++++G WE A VR LM+E + PG
Sbjct: 631 ANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPG 689
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 175/402 (43%), Gaps = 75/402 (18%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+RR F + V N+++ Y ++ ++ L L++++ +A+ ++ + +K+C
Sbjct: 143 ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAE 199
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQC-------------RKGDD------ 231
+ G Q+H + G + DS + ++++++Y++C R+ DD
Sbjct: 200 LEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSAL 259
Query: 232 ------------ACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEP 279
+ +FD R + WN MIS + NN +AL LF+ M+ N+
Sbjct: 260 ISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR---NETRE 316
Query: 280 DDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC-------- 331
D T LE G+++H + + G I ++++L+ MYS+CG
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 332 -----------------------LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
+D A VF NKS++SW++M +G + NG E +E
Sbjct: 377 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLE 436
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
F +M ++ + D+ + + V+SAC+ ++ G F R G+ + ++DL
Sbjct: 437 YFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT-IVGLDSDQVVSSSLIDLY 495
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGE 470
+ G ++ V TM VK D W ++ I G+ T G+
Sbjct: 496 CKCGFVEHGRRVFDTM-VKSDEVPWNSM-----ISGYATNGQ 531
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 228/492 (46%), Gaps = 65/492 (13%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRG---IAANPLSSSFAVKS 187
+R F+++ V + MI Y + + G L+ MR+ G + +N L+ F K+
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMF--KA 284
Query: 188 CIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAW 247
C F+ G Q+H V + + D L ++M +YS+ +A VF M +D+V+W
Sbjct: 285 CRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSW 344
Query: 248 NVMISCCVRNNRTRDALSLF------------DVMQSTSNKCE----------------- 278
N +I+ V+ + +A LF D+++ S K E
Sbjct: 345 NSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNI 404
Query: 279 -------------------------------PDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
P+ T L G +IH +
Sbjct: 405 TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRV 464
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
++ +++ NSL++MY +CG + AY++F ++VS++ MISG + NG+GK+A+
Sbjct: 465 VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKAL 524
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDL 427
+ F ++ G P+ TF +LSAC H G VD G +F M + I P HY CMVDL
Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDL 584
Query: 428 LGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDY 487
LGR+GLLD A +I+TM KP +W +LL A + H V L E ++LIEL+ A Y
Sbjct: 585 LGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPY 644
Query: 488 VLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIY 547
V+L +YS G + + K K I+ PG I LKG VH F+ D S EI
Sbjct: 645 VVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIG 704
Query: 548 ETLDDINKQLKI 559
TL I K++++
Sbjct: 705 FTLKMIRKEMEL 716
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 141/347 (40%), Gaps = 65/347 (18%)
Query: 133 RFFEQINRPIVSHFNTMI-----------RAYSM-SDSPQKGLYLYRDMRRRGIAANPLS 180
+ F+++ + + +N MI +AY + D P+K Y M + A
Sbjct: 102 QVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFD 161
Query: 181 SS--FAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLL---TAVMDLYS-------QCRK 228
+ ++ ++F D V + + G ++++ + AV ++ S C+
Sbjct: 162 EAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKM 221
Query: 229 GD--DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXX 286
G DA +FD M +R+ + W MI + D LF M+ + DV
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR------QEGDVKVNS 275
Query: 287 XXXXXXXXNSLEF-----GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMG 341
+F G +IH + + L NSL++MYS+ G + +A VF
Sbjct: 276 NTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGV 335
Query: 342 TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM-------------------------QRI 376
NK VSW+++I+GL EA E FE+M +
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELF 395
Query: 377 GIRP--DDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHY 421
G+ P D+ T+T ++SA +G +E + +F +M+ + + PN + +
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQK-EVCPNSYTF 441
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 17/210 (8%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
V+S S++ LQIH +V +V+D +V +S G D + + F I+
Sbjct: 444 VLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTND---AYKIFSCIS 500
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
P + +NTMI YS + +K L L+ + G N ++ + +C+ VG V
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVH----VGYVD 556
Query: 200 VHCNVFKDGHQSDSLL-----LTAVMDLYSQCRKGDDACKVFDEMPQR-DTVAWNVMISC 253
+ FK S ++ ++DL + DDA + MP + + W ++S
Sbjct: 557 LGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSA 616
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVT 283
++T + L ++ + EPD T
Sbjct: 617 ----SKTHLRVDLAELAAKKLIELEPDSAT 642
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 185/334 (55%), Gaps = 13/334 (3%)
Query: 230 DDACKVFDEMPQRDTVAWNVMI-----SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTX 284
DDA +F EM D W++M+ SCC +A+ +F +Q+ + P+ VT
Sbjct: 519 DDAQMLFTEMSTTDLTTWSLMVRIYAESCC-----PNEAIGVFREIQARGMR--PNTVTI 571
Query: 285 XXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPN 344
SL + H YI+ RG G I L +L+ +Y++CG L AY VF
Sbjct: 572 MNLLPVCAQLASLHLVRQCHGYII-RGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDAR 630
Query: 345 KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSF 404
+ +V ++AM++G AV+G GKEA+ + M I+PD T +L+AC H+GL+ +G+
Sbjct: 631 RDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQI 690
Query: 405 FDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHG 464
+D + G+ P + Y C VDL+ R G LD AY +T M V+P+ IW TLL AC +
Sbjct: 691 YDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYN 750
Query: 465 HVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTI 524
+ LG V L++ ++ + G++VL+ N+Y++ WE V E+R LMK+K ++ GC +
Sbjct: 751 RMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWL 810
Query: 525 ELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLK 558
E+ G + FV D SH R+ I++ ++ + Q+K
Sbjct: 811 EVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 7/279 (2%)
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
VK+C D+ G +H VFK GH + S + +V+++Y++CR+ DD K+F +M D
Sbjct: 28 VKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDP 87
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
V WN++++ + + R+ + F M +++ +P VT G+ +H
Sbjct: 88 VVWNIVLT-GLSVSCGRETMRFFKAMH-FADEPKPSSVTFAIVLPLCVRLGDSYNGKSMH 145
Query: 305 NYIMERGYGGAINLSNSLIAMYSRCG-CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYG 363
+YI++ G + N+L++MY++ G AY F G +K VVSW+A+I+G + N
Sbjct: 146 SYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMM 205
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACS---HSGLVDEGMSFFDRMIGEFGITPNIHH 420
+A +F M + P+ T VL C+ + G ++ + ++
Sbjct: 206 ADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFV 265
Query: 421 YGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
+V R G +++A + T M K D W ++
Sbjct: 266 CNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVIAG 303
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 178 PLSSSFAV--KSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCR-KGDDACK 234
P S +FA+ C+R D G +H + K G + D+L+ A++ +Y++ DA
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 235 VFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXX 294
FD + +D V+WN +I+ NN DA F +M EP+ T
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM--LKEPTEPNYATIANVLPVCASM 237
Query: 295 N---SLEFGERIHNYIMERGYGGA-INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
+ + G +IH+Y+++R + + + NSL++ Y R G +++A +F +K +VSW
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 351 SAMISGLAVNGYGKEAIEAFEEMQRIG-IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI 409
+ +I+G A N +A + F + G + PD T +L C+ + G ++
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 410 GEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
+ + ++ R G AY + M+ K D W +L A
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 170/450 (37%), Gaps = 48/450 (10%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+H++I+ L D V +S A G + Y+ F+ I V +N +I +S
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA--FDGIADKDVVSWNAIIAGFSE 201
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI---RFLDIVGGVQVHCNVFKDGH-QS 211
++ + M + N + + + C + + G Q+H V + Q+
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT 261
Query: 212 DSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQ 271
+ +++ Y + + ++A +F M +D V+WNV+I+ N A LF +
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG-GAINLSNSLIAMYSRCG 330
+ PD VT L G+ IH+YI+ Y ++ N+LI+ Y+R G
Sbjct: 322 HKGD-VSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFG 380
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLS 390
AY F K ++SW+A++ A + + + + I D T +L
Sbjct: 381 DTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLK 440
Query: 391 ACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDP 450
C + + G +H Y +AGLL + +P
Sbjct: 441 FCIN--------------VQGIGKVKEVHGYSV------KAGLLHD----------EEEP 470
Query: 451 TIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLM 510
+ LL A G+V ++ L E + + Y LL+ Y ++G + + T M
Sbjct: 471 KLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVS--YNSLLSGYVNSGSHDDAQMLFTEM 528
Query: 511 KEKAIQT--------TPGCCTIELKGVVHE 532
+ T CC E GV E
Sbjct: 529 STTDLTTWSLMVRIYAESCCPNEAIGVFRE 558
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 173/411 (42%), Gaps = 62/411 (15%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
LQ H VC +LV F RV G +++ + F ++ + +N +I Y
Sbjct: 259 LQTHV-FVCNSLVS-------FYLRV---GRIEE---AASLFTRMGSKDLVSWNVVIAGY 304
Query: 154 SMSDSPQKGLYLYRDMRRRG-IAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQ-S 211
+ + K L+ ++ +G ++ + ++ + C + D+ G ++H + + +
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 212 DSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQ 271
D+ + A++ Y++ A F M +D ++WN ++ + + L+L +
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNL--LHH 422
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY---GGAINLSNSLIAMYSR 328
+ D VT + + +H Y ++ G L N+L+ Y++
Sbjct: 423 LLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAK 482
Query: 329 CGCLDKAYEVFMG-TPNKSVVSWSAMISG--------------------------LAVNG 361
CG ++ A+++F+G + +++VS+++++SG L V
Sbjct: 483 CGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRI 542
Query: 362 YGK-----EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG---LVDEGMSFFDRMIGEFG 413
Y + EAI F E+Q G+RP+ T +L C+ LV + + R G G
Sbjct: 543 YAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR--GGLG 600
Query: 414 ITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHG 464
+I G ++D+ + G L AY V + A + D ++ ++ +HG
Sbjct: 601 ---DIRLKGTLLDVYAKCGSLKHAYSVFQSDA-RRDLVMFTAMVAGYAVHG 647
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 96/214 (44%), Gaps = 4/214 (1%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
++ F +++ ++ ++ M+R Y+ S P + + ++R+++ RG+ N ++ + C +
Sbjct: 521 AQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQ 580
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
+ Q H + + G D L ++D+Y++C A VF +RD V + M
Sbjct: 581 LASLHLVRQCHGYIIRGG-LGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAM 639
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME- 309
++ + R ++AL ++ M T + +PD V ++ G +I++ I
Sbjct: 640 VAGYAVHGRGKEALMIYSHM--TESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTV 697
Query: 310 RGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTP 343
G + + + +R G LD AY P
Sbjct: 698 HGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMP 731
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 197/405 (48%), Gaps = 36/405 (8%)
Query: 150 IRAYSMSDSPQKGLYLYRDMRRRGIAANPLSS---SFAVKSCIRFLDIVGGVQVHCNVFK 206
+ +Y+ + ++ L L+ M A PL + S A+KSC V G VH + K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSS--FALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVK 76
Query: 207 DGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSL 266
S+ + A++D+Y +C A K+FDE+PQR+ V WN MIS + ++A+ L
Sbjct: 77 SNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVEL 136
Query: 267 FDVMQSTSN-------------------------------KCEPDDVTXXXXXXXXXXXN 295
++ M N + +P+ +T
Sbjct: 137 YEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIG 196
Query: 296 SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMIS 355
+ + IH+Y L + L+ Y RCG + VF ++ VV+WS++IS
Sbjct: 197 AFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLIS 256
Query: 356 GLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGIT 415
A++G + A++ F+EM+ + PDD F VL ACSH+GL DE + +F RM G++G+
Sbjct: 257 AYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLR 316
Query: 416 PNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIER 475
+ HY C+VD+L R G ++AY+VI M KP W LLGACR +G + L E
Sbjct: 317 ASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARE 376
Query: 476 LIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
L+ ++ + +YVLL IY S G E+ +R MKE ++ +PG
Sbjct: 377 LLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPG 421
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/558 (25%), Positives = 258/558 (46%), Gaps = 47/558 (8%)
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYS--------RRFFEQINRPIVSHFNTMIRAYSMSD 157
VH AV + F+ V + L D +YS R+ F+ + V +N+MI Y +
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVD-MYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 158 SPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLT 217
K L+ M+ + N ++ + + I K+G + ++
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYI----------------KNGDEGEA---- 472
Query: 218 AVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKC 277
MDL+ + K D QR+T WN++I+ ++N + +AL LF MQ + +
Sbjct: 473 --MDLFQRMEK--------DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFS--RF 520
Query: 278 EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYE 337
P+ VT + IH ++ R + N+L Y++ G ++ +
Sbjct: 521 MPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRT 580
Query: 338 VFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGL 397
+F+G K +++W+++I G ++G A+ F +M+ GI P+ T + ++ A G
Sbjct: 581 IFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGN 640
Query: 398 VDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
VDEG F + ++ I P + H MV L GRA L++A + I M ++ + IW + L
Sbjct: 641 VDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFL 700
Query: 458 GACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
CRIHG + + E L L+ + ++ IY+ + E ++ ++
Sbjct: 701 TGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKK 760
Query: 518 TPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKE 577
G IE++ ++H F D S +Y ++ K ++ + + EL ++++
Sbjct: 761 PLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVE---KMSRLDNRSDQYNGELW-IEEEG 816
Query: 578 KGYVLSYHSEKLAIAFGVLATPPG--TTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRD 635
+ HSEK A+AFG++++ TT+R+ N+R+C DCH+ K S Y D++L D
Sbjct: 817 REETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLED 876
Query: 636 HKRFHHFRGGQCSCSDYW 653
+ HHF+ G CSC DYW
Sbjct: 877 TRCLHHFKNGDCSCKDYW 894
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 160/339 (47%), Gaps = 12/339 (3%)
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
++SCI I G +H F + D + T ++ +Y++C DA KVFD M +R+
Sbjct: 88 LESCIDSGSIHLGRILHAR-FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL 146
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
W+ MI R NR R+ LF +M + PDD +E G+ IH
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMK--DGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 305 NYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGK 364
+ +++ G + +SNS++A+Y++CG LD A + F + V++W++++ NG +
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE 264
Query: 365 EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCM 424
EA+E +EM++ GI P T+ ++ + G D M +M FGIT ++ + M
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAM 323
Query: 425 VDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKA 481
+ L G+ +A ++ M V P+ + + AC + G V I +K
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV--HSIAVKM 381
Query: 482 QEAGDYVL---LLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
D ++ L+++YS G E +V +K K + T
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT 420
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 155/372 (41%), Gaps = 47/372 (12%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
IH+ ++ + VS L+ A G L ++ +FF ++ V +N+++ AY
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELD---FATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLL 215
+ ++ + L ++M + GI+ ++ + ++GG
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNI----------LIGG------------------ 291
Query: 216 LTAVMDLYSQCRKGDDACKVFDEMPQ----RDTVAWNVMISCCVRNNRTRDALSLFDVMQ 271
Y+Q K D A + +M D W MIS + N AL +F M
Sbjct: 292 -------YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
P+ VT + G +H+ ++ G+ + + NSL+ MYS+CG
Sbjct: 345 LAG--VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 332 LDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
L+ A +VF NK V +W++MI+G GY +A E F MQ +RP+ T+ ++S
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVK---P 448
+G E M F RM + + N + ++ + G D+A E+ M P
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 449 DPTIWRTLLGAC 460
+ +LL AC
Sbjct: 523 NSVTILSLLPAC 534
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 161/400 (40%), Gaps = 82/400 (20%)
Query: 108 DPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYR 167
D V LS A G + D +R+ F+ + + ++ MI AYS + ++ L+R
Sbjct: 114 DVFVETKLLSMYAKCGCIAD---ARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 168 DMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCR 227
M + G+ + ++ C D+ G +H V K G S + +++ +Y++C
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 228 KGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXX 287
+ D A K F M +RD +AWN ++ +N + +A+ L M+
Sbjct: 231 ELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME---------------- 274
Query: 288 XXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTP---- 343
+ G + N LI Y++ G D A ++
Sbjct: 275 ---------------------KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGI 313
Query: 344 NKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEG-- 401
V +W+AMISGL NG +A++ F +M G+ P+ T +SACS ++++G
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 402 -------MSFFD---------------------RMIGEFGITPNIHHYGCMVDLLGRAGL 433
M F D R + + +++ + M+ +AG
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGY 433
Query: 434 LDKAYEVITTMA---VKPDPTIWRTLLGACRIHGHVTLGE 470
KAYE+ T M ++P+ W T+ I G++ G+
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTM-----ISGYIKNGD 468
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 132/313 (42%), Gaps = 52/313 (16%)
Query: 161 KGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVM 220
+ L ++R M G+ N ++ AV +C I G +VH K G D L+ +++
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 221 DLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPD 280
D+YS+C K +DA KVFD + +D WN MI+ + A LF MQ + + P+
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR--PN 452
Query: 281 DVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFM 340
+T N++I+ Y + G +A ++F
Sbjct: 453 IITW-----------------------------------NTMISGYIKNGDEGEAMDLFQ 477
Query: 341 -----GTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHS 395
G ++ +W+ +I+G NG EA+E F +MQ P+ T +L AC++
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN- 536
Query: 396 GLVDEGMSFFDRMIGEFGITPNIHHY----GCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
L+ M R I + N+ + D ++G ++ + + M K D
Sbjct: 537 -LLGAKMV---REIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK-DII 591
Query: 452 IWRTLLGACRIHG 464
W +L+G +HG
Sbjct: 592 TWNSLIGGYVLHG 604
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 223/425 (52%), Gaps = 3/425 (0%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
F ++ + V + TM+ ++ + K + YR+M+ G + + +++ D
Sbjct: 173 LFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGD 232
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
G VH +++ G + ++ T+++D+Y++ + A +VF M + V+W +IS
Sbjct: 233 TKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISG 292
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+N A MQS +PD VT SL+ G +H YI++R
Sbjct: 293 FAQNGLANKAFEAVVEMQSLG--FQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL 350
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
+ + +L+ MYS+CG L + E+F K +V W+ MIS ++G G+E + F +M
Sbjct: 351 DRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKM 409
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL 433
I PD TF +LSA SHSGLV++G +F MI ++ I P+ HY C++DLL RAG
Sbjct: 410 TESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGR 469
Query: 434 LDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNI 493
+++A ++I + + IW LL C H ++++G+ ++++L G L+ N
Sbjct: 470 VEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNF 529
Query: 494 YSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDI 553
+++A W++VA+VR LM+ A++ PG IE+ G + F+++D+SH + + L ++
Sbjct: 530 FATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNL 589
Query: 554 NKQLK 558
+++
Sbjct: 590 KTEIR 594
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 231/493 (46%), Gaps = 49/493 (9%)
Query: 81 ISTIKSVSQ-KPHLLQIHAHIVCT-TLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQI 138
I ++S+S+ K H+ QIHA ++ T L++ ++S +A G + + Y+R+ F+++
Sbjct: 20 IKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDL---IASCGRIGEISYARKVFDEL 76
Query: 139 NRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGV 198
+ VS +N+MI YS +P + L LY M I + + + +K+C+ L + G
Sbjct: 77 PQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGE 136
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNN 258
V C G+++D + ++V++LY +C K D+A +F +M +RD + W M++ +
Sbjct: 137 AVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAG 196
Query: 259 RTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINL 318
++ A+ + MQ+ D V + G +H Y+ G + +
Sbjct: 197 KSLKAVEFYREMQNEG--FGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVV 254
Query: 319 SNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGI 378
SL+ MY++ G ++ A VF K+ VSW ++ISG A NG +A EA EMQ +G
Sbjct: 255 ETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGF 314
Query: 379 RPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHH---YGCMVDLLGRAGLLD 435
+PD T GVL ACS G + G R++ + + ++ ++D+ + G L
Sbjct: 315 QPDLVTLVGVLVACSQVGSLKTG-----RLVHCYILKRHVLDRVTATALMDMYSKCGALS 369
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ----EAGDYVLLL 491
+ E+ + + D W T++ IHG+ G+ V+ +++ + + LL
Sbjct: 370 SSREIFEHVG-RKDLVCWNTMISCYGIHGN---GQEVVSLFLKMTESNIEPDHATFASLL 425
Query: 492 NIYSSAG------HWEKVAEVRTLMKEKAIQTTPG--CCTIELKGVVHEFVVDDVSHKRK 543
+ S +G HW V ++ + IQ + C I+L R
Sbjct: 426 SALSHSGLVEQGQHWFSV-----MINKYKIQPSEKHYVCLIDLLA-------------RA 467
Query: 544 GEIYETLDDINKQ 556
G + E LD IN +
Sbjct: 468 GRVEEALDMINSE 480
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 207/392 (52%), Gaps = 5/392 (1%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRG-IAANPLSSSFAVKSCIRFL 192
F+ R I S +N +I +S S K + L+ M R + + + +++C
Sbjct: 90 FWHMPYRNIFS-WNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
+ G +H K G S + +A++ +Y K A K+FD+MP RD+V + M
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
V+ L++F M + D V +L+ G+ +H + + R
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFAL--DSVVMVSLLMACGQLGALKHGKSVHGWCIRRCS 266
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+NL N++ MY +C LD A+ VF+ + V+SWS++I G ++G + + F+E
Sbjct: 267 CLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDE 326
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M + GI P+ TF GVLSAC+H GLV++ +F R++ E+ I P + HY + D + RAG
Sbjct: 327 MLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF-RLMQEYNIVPELKHYASVADCMSRAG 385
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLN 492
LL++A + + M VKPD + +L C+++G+V +GERV LI+LK ++A YV L
Sbjct: 386 LLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAG 445
Query: 493 IYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTI 524
+YS+AG +++ +R MKEK I PGC +I
Sbjct: 446 LYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 212/428 (49%), Gaps = 8/428 (1%)
Query: 87 VSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHF 146
VS +P +H +V +V+D +V + + G L + + R + + +
Sbjct: 263 VSHEP----LHCLVVKCGMVNDISVVTSLVCAYSRCGCL---VSAERLYASAKQDSIVGL 315
Query: 147 NTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFK 206
+++ Y+ + + R+ + + ++ + C + I G+ +H K
Sbjct: 316 TSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIK 375
Query: 207 DGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSL 266
G + +L++ ++ +YS+ + +F+++ + ++WN +IS CV++ R A +
Sbjct: 376 SGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEV 435
Query: 267 FDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMY 326
F M T PD +T L G+ +H Y + + + +LI MY
Sbjct: 436 FHQMMLTGGLL-PDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMY 494
Query: 327 SRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFT 386
++CG +A VF +W++MISG +++G A+ + EM+ G++PD+ TF
Sbjct: 495 AKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFL 554
Query: 387 GVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAV 446
GVLSAC+H G VDEG F MI EFGI+P + HY MV LLGRA L +A +I M +
Sbjct: 555 GVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDI 614
Query: 447 KPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEV 506
KPD +W LL AC IH + +GE V ++ L + G YVL+ N+Y++ W+ V V
Sbjct: 615 KPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRV 674
Query: 507 RTLMKEKA 514
R +MK+
Sbjct: 675 RNMMKDNG 682
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 13/264 (4%)
Query: 137 QINRPI-----VSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI-- 189
+I +PI +S+F++++++ + + ++RD+ R + N + S +++
Sbjct: 2 RITKPITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTS 61
Query: 190 --RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAW 247
F V VQ H + K G + T++++LY + A +FDEMP+RDTV W
Sbjct: 62 FNSFKLQVEQVQTH--LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVW 119
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
N +I RN DA LF VM P T + G +H
Sbjct: 120 NALICGYSRNGYECDAWKLFIVM--LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVA 177
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
+ G + N+LI+ YS+C L A +F +KS VSW+ MI + +G +EAI
Sbjct: 178 AKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAI 237
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSA 391
F+ M + T +LSA
Sbjct: 238 TVFKNMFEKNVEISPVTIINLLSA 261
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 170/398 (42%), Gaps = 34/398 (8%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
F E ++ VS +NTMI AYS S ++ + ++++M + + +P+ + I L
Sbjct: 209 FREMKDKSTVS-WNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPV-------TIINLLS 260
Query: 194 I-VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
V +HC V K G +D ++T+++ YS+C A +++ Q V ++S
Sbjct: 261 AHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVS 320
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
C A+ F + K D V + ++ G +H Y ++ G
Sbjct: 321 CYAEKGDMDIAVVYFSKTRQLCMK--IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL 378
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+ N LI MYS+ ++ +F ++SW+++ISG +G A E F +
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQ 438
Query: 373 MQRI-GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNI--HHYGC--MVDL 427
M G+ PD T +L+ CS ++ G + + + + N ++ C ++D+
Sbjct: 439 MMLTGGLLPDAITIASLLAGCSQLCCLNLG-----KELHGYTLRNNFENENFVCTALIDM 493
Query: 428 LGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG-- 485
+ G +A V ++ P W +++ + G L R + +E++ E G
Sbjct: 494 YAKCGNEVQAESVFKSIKA-PCTATWNSMISGYSLSG---LQHRALSCYLEMR--EKGLK 547
Query: 486 -DYVLLLNIYSSAGHWEKVAE----VRTLMKEKAIQTT 518
D + L + S+ H V E R ++KE I T
Sbjct: 548 PDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPT 585
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 12/245 (4%)
Query: 242 RDTVAWNVMISCCVRNNRTRDALSLF-DVMQSTSNKCEPDDVTXXXXXXXXXXX-NSLEF 299
RD ++ ++ C+ + +++F D+++S+ P+ T NS +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLT---PNHFTMSIFLQATTTSFNSFKL 67
Query: 300 G-ERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLA 358
E++ ++ + G + + SL+ +Y + GC+ A +F P + V W+A+I G +
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 359 VNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNI 418
NGY +A + F M + G P T +L C G V +G S + + G+ +
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHG-VAAKSGLELDS 186
Query: 419 HHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHG----HVTLGERVIE 474
++ + L A + M K + W T++GA G +T+ + + E
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGAYSQSGLQEEAITVFKNMFE 245
Query: 475 RLIEL 479
+ +E+
Sbjct: 246 KNVEI 250
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 167/288 (57%), Gaps = 1/288 (0%)
Query: 231 DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX 290
+A +VFD MP RD V+WN M++ + L +F+ M S + +PD T
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE-KPDGFTLVSVLSA 313
Query: 291 XXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
SL GE +H YI + G L+ +L+ MYS+CG +DKA EVF T + V +W
Sbjct: 314 CASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTW 373
Query: 351 SAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG 410
+++IS L+V+G GK+A+E F EM G +P+ TF GVLSAC+H G++D+ F+ M
Sbjct: 374 NSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSS 433
Query: 411 EFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGE 470
+ + P I HYGCMVDLLGR G +++A E++ + + +LLGAC+ G + E
Sbjct: 434 VYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAE 493
Query: 471 RVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTT 518
R+ RL+EL +++ Y + N+Y+S G WEKV + R M+ + + +
Sbjct: 494 RIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 184/415 (44%), Gaps = 58/415 (13%)
Query: 66 PTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPL 125
P PI SF + + + ++ I+ Q HA ++ T L HD + ++ A +
Sbjct: 39 PVPILSF--TERAKSLTEIQ---------QAHAFMLKTGLFHDTFSASKLVAFAATNPEP 87
Query: 126 QDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAV 185
+ Y+ +I P N++IRAY+ S +P+ L ++R+M + + S +F +
Sbjct: 88 KTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVL 147
Query: 186 KSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTV 245
K+C F G Q+H K G +D + ++++Y + + A KV D MP RD V
Sbjct: 148 KACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAV 207
Query: 246 AWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHN 305
+WN ++S + +A +LFD M+
Sbjct: 208 SWNSLLSAYLEKGLVDEARALFDEME---------------------------------- 233
Query: 306 YIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKE 365
ER + N +I+ Y+ G + +A EVF P + VVSW+AM++ A G E
Sbjct: 234 ---ERN----VESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNE 286
Query: 366 AIEAFEEMQRIGI-RPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCM 424
+E F +M +PD T VLSAC+ G + +G + I + GI +
Sbjct: 287 VLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQG-EWVHVYIDKHGIEIEGFLATAL 345
Query: 425 VDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
VD+ + G +DKA EV + K D + W +++ +HG LG+ +E E+
Sbjct: 346 VDMYSKCGKIDKALEVFRATS-KRDVSTWNSIISDLSVHG---LGKDALEIFSEM 396
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 297 LEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISG 356
E G +IH ++ G + + N+L+ +Y R G + A +V P + VSW++++S
Sbjct: 156 FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSA 215
Query: 357 LAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITP 416
G EA F+EM+ + +++ ++S + +GLV E FD M
Sbjct: 216 YLEKGLVDEARALFDEMEERNV----ESWNFMISGYAAAGLVKEAKEVFDSM-----PVR 266
Query: 417 NIHHYGCMVDLLGRAGLLDKAYEVITTM----AVKPDPTIWRTLLGACRIHGHVTLGERV 472
++ + MV G ++ EV M KPD ++L AC G ++ GE V
Sbjct: 267 DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV 326
Query: 473 ---IER-LIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
I++ IE++ A L+++YS G +K EV ++ + T
Sbjct: 327 HVYIDKHGIEIEGFLA---TALVDMYSKCGKIDKALEVFRATSKRDVST 372
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 340 MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVD 399
+G+PN + +++I A + + A+ F EM + PD +FT VL AC+ +
Sbjct: 100 IGSPNG--FTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 157
Query: 400 EGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGA 459
EG I G+ ++ +V++ GR+G + A +V+ M V+ D W +LL A
Sbjct: 158 EGRQIHGLFIKS-GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSA 215
Query: 460 CRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEV 506
G V + + E++ + + +++ Y++AG ++ EV
Sbjct: 216 YLEKGLVDEARALFD---EMEERNVESWNFMISGYAAAGLVKEAKEV 259
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 201/384 (52%), Gaps = 10/384 (2%)
Query: 123 GPLQDPIYSRRFFEQINRPI-VSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSS 181
G + D +R+ F+++ + + F+T++ Y L L+R MR+ + N +S+
Sbjct: 174 GKISD---ARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVN-VST 229
Query: 182 SFAVKSCIRFL-DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP 240
+ S I L D+ G H K G D L+TA++ +Y + A ++FD
Sbjct: 230 LLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAI 289
Query: 241 QRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFG 300
++D V WN MI + + + L M+ K +P+ T + G
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKY--EKMKPNSSTFVGLLSSCAYSEAAFVG 347
Query: 301 ERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVN 360
+ + + E L +L+ MY++ G L+KA E+F +K V SW+AMISG +
Sbjct: 348 RTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAH 407
Query: 361 GYGKEAIEAFEEMQR--IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNI 418
G +EA+ F +M+ +RP++ TF VL+ACSH GLV EG+ F RM+ + TP +
Sbjct: 408 GLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKV 467
Query: 419 HHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE 478
HYGC+VDLLGRAG L++AYE+I + + D T WR LL ACR++G+ LGE V+ RL E
Sbjct: 468 EHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAE 527
Query: 479 LKAQEAGDYVLLLNIYSSAGHWEK 502
+ D +LL ++ AG+ EK
Sbjct: 528 MGETHPADAILLAGTHAVAGNPEK 551
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 204/426 (47%), Gaps = 14/426 (3%)
Query: 78 EQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQ 137
+++I+ ++S + +IH ++V T L D +S++ + D Y+ FE
Sbjct: 29 QKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFA----VSKLLAFSSVLDIRYASSIFEH 84
Query: 138 INRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGG 197
++ + FNTMIR YS+SD P++ ++ +R +G+ + S +KSC R L + G
Sbjct: 85 VSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIG 144
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR-DTVAWNVMISCCVR 256
+H + G + L A++ Y C K DA KVFDEMPQ D V ++ +++ ++
Sbjct: 145 EGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQ 204
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
++ AL LF +M+ + + + T L E H ++ G +
Sbjct: 205 VSKKALALDLFRIMRKS--EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDL 262
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
+L +LI MY + G + A +F K VV+W+ MI A G +E + +M+
Sbjct: 263 HLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE 322
Query: 377 GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDK 436
++P+ TF G+LS+C++S G + D ++ E I + +VD+ + GLL+K
Sbjct: 323 KMKPNSSTFVGLLSSCAYSEAAFVGRTVAD-LLEEERIALDAILGTALVDMYAKVGLLEK 381
Query: 437 AYEVITTMAVKPDPTIWRTLLGACRIHG----HVTLGERVIERLIELKAQEAGDYVLLLN 492
A E+ M K D W ++ HG VTL ++ E +++ E ++++LN
Sbjct: 382 AVEIFNRMKDK-DVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEI-TFLVVLN 439
Query: 493 IYSSAG 498
S G
Sbjct: 440 ACSHGG 445
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 211/420 (50%), Gaps = 35/420 (8%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+ F+QI + + TMI + + L Y +M R G+ + + + + R
Sbjct: 258 AEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASAR 317
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQ------------------------- 225
+ G+Q+H + K G L ++ Y+
Sbjct: 318 SVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNAL 377
Query: 226 ----CRKG--DDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEP 279
+ G + A +VFD+ +D +WN MIS ++ + AL LF M S+S + +P
Sbjct: 378 IAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS-QVKP 436
Query: 280 DDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVF 339
D +T SLE G+R H+Y+ NL+ ++I MY++CG ++ A +F
Sbjct: 437 DAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIF 496
Query: 340 MGTPNKS---VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG 396
T N S + W+A+I G A +G+ K A++ + ++Q + I+P+ TF GVLSAC H+G
Sbjct: 497 HQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAG 556
Query: 397 LVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTL 456
LV+ G ++F+ M + GI P+I HYGCMVDLLG+AG L++A E+I M VK D IW L
Sbjct: 557 LVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGML 616
Query: 457 LGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQ 516
L A R HG+V + E L + G V+L N+Y+ AG WE VA VR M+ + ++
Sbjct: 617 LSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 167/414 (40%), Gaps = 78/414 (18%)
Query: 129 IYSRRFFEQIN-------RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSS 181
+ SRR ++ + R VS + T+I+ Y+ ++ + + L+R+MR GI N ++
Sbjct: 118 VRSRRLWDALKLFDVMPERSCVS-YTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTL 176
Query: 182 SFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQ 241
+ + +C I + K + + T ++ +Y C DA K+FDEMP+
Sbjct: 177 ATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPE 236
Query: 242 RDTVAWNV-------------------------------MISCCVRNNRTRDALSLFDVM 270
R+ V WNV MI C+R N+ +AL + M
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY----------------GG 314
K P +V G ++H I++RG+
Sbjct: 297 LRCGMK--PSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSN 354
Query: 315 AINLS---------------NSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
I L+ N+LIA + + G +++A EVF T +K + SW+AMISG A
Sbjct: 355 DIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQ 414
Query: 360 NGYGKEAIEAFEEM-QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFG-ITPN 417
+ + A+ F EM ++PD T V SA S G ++EG D + F I PN
Sbjct: 415 SLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPN 472
Query: 418 IHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI--WRTLLGACRIHGHVTLG 469
+ ++D+ + G ++ A + TI W ++ HGH L
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 41/276 (14%)
Query: 184 AVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCR-------------KGD 230
A+ SC D+ G Q+HC V K G S+ + +V+++Y++CR K D
Sbjct: 47 ALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLD 106
Query: 231 ------------------DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQS 272
DA K+FD MP+R V++ +I +NN+ +A+ LF M++
Sbjct: 107 SASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRN 166
Query: 273 TSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL 332
++VT + + + ++ G + +S +L+ MY C CL
Sbjct: 167 LG--IMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCL 224
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
A ++F P +++V+W+ M++G + G ++A E F+++ D ++ ++ C
Sbjct: 225 KDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT----EKDIVSWGTMIDGC 280
Query: 393 SHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
+DE + ++ M+ G+ P+ MVDLL
Sbjct: 281 LRKNQLDEALVYYTEML-RCGMKPS---EVMMVDLL 312
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 62/227 (27%)
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMG------------- 341
N + G +IH +++ G + NS++ MY++C L A VF
Sbjct: 55 NDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMV 114
Query: 342 ------------------TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQ 383
P +S VS++ +I G A N EA+E F EM+ +GI ++
Sbjct: 115 DGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEV 174
Query: 384 TFTGVLSACSH-SGLVD----EGMSFFDRMIGEFGITPNIHHYGC--------------- 423
T V+SACSH G+ D + ++ ++ G ++ N+ H C
Sbjct: 175 TLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEM 234
Query: 424 ----------MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGAC 460
M++ +AGL+++A E+ + K D W T++ C
Sbjct: 235 PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK-DIVSWGTMIDGC 280
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 29/272 (10%)
Query: 108 DPAVSLHFLSRVAL-SGPLQDPIY--SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLY 164
+ +V H SR AL +G +++ + +R F+Q + + +N MI Y+ S SPQ L+
Sbjct: 364 EASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALH 423
Query: 165 LYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL---------- 214
L+R+M +SSS I + + + ++ + D L
Sbjct: 424 LFREM---------ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDN 474
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQ--RDTVA-WNVMISCCVRNNRTRDALSLFDVMQ 271
L A++D+Y++C + A +F + T++ WN +I + + AL L+ +Q
Sbjct: 475 LTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQ 534
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM-ERGYGGAINLSNSLIAMYSRCG 330
S K P+ +T +E G+ + + G I ++ + + G
Sbjct: 535 SLPIK--PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAG 592
Query: 331 CLDKAYEVFMGTPNKS-VVSWSAMISGLAVNG 361
L++A E+ P K+ V+ W ++S +G
Sbjct: 593 RLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 241/456 (52%), Gaps = 18/456 (3%)
Query: 115 FLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGI 174
+SR + G L+ + F Q++ V + TMI S + + ++ +MR G+
Sbjct: 317 LMSRYSKCGVLEAV---KSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGV 368
Query: 175 AANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACK 234
N ++ + + I G+++H K G S+ + + + LY++ +DA K
Sbjct: 369 YPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKK 428
Query: 235 VFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXX 294
F+++ R+ ++WN MIS +N + +AL +F S + + P++ T
Sbjct: 429 AFEDITFREIISWNAMISGFAQNGFSHEALKMF---LSAAAETMPNEYTFGSVLNAIAFA 485
Query: 295 N--SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSA 352
S++ G+R H ++++ G +S++L+ MY++ G +D++ +VF K+ W++
Sbjct: 486 EDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTS 545
Query: 353 MISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF 412
+IS + +G + + F +M + + PD TF VL+AC+ G+VD+G F+ MI +
Sbjct: 546 IISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVY 605
Query: 413 GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERV 472
+ P+ HY CMVD+LGRAG L +A E+++ + P ++ +++LG+CR+HG+V +G +V
Sbjct: 606 NLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKV 665
Query: 473 IERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKG---- 528
E +E+K + +G YV + NIY+ W+K AE+R M++K + G I++
Sbjct: 666 AELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGS 725
Query: 529 -VVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYV 563
+ F D SH + EIY ++ I ++ + G V
Sbjct: 726 LTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 132/270 (48%), Gaps = 13/270 (4%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDI 194
FE + P V +NT++ + D Q L M+ G+ + + S A+ C+
Sbjct: 134 FENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGF 190
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCC 254
+ G+Q+ V K G +SD ++ + + +YS+ A +VFDEM +D ++WN ++S
Sbjct: 191 LLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL 250
Query: 255 VRNNR-TRDALSLF-DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
+ +A+ +F D+M+ E D V+ L+ +IH ++RGY
Sbjct: 251 SQEGTFGFEAVVIFRDMMRE---GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 307
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+ + N L++ YS+CG L+ VF ++VVSW+ MIS +A+ F
Sbjct: 308 ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLN 362
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGM 402
M+ G+ P++ TF G+++A + + EG+
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQIKEGL 392
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 11/242 (4%)
Query: 157 DSPQKGLYLYRDMRRRGIAA---NPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDS 213
+SP + L ++++ + G + ++ A+K+C D+ G Q+H G S
Sbjct: 54 NSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFV 111
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQST 273
+ AVM +Y + + D+A +F+ + D V+WN ++S N ++L V++
Sbjct: 112 CVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQ-----IALNFVVRMK 166
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
S D T G ++ + +++ G + + NS I MYSR G
Sbjct: 167 SAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFR 226
Query: 334 KAYEVFMGTPNKSVVSWSAMISGLAVNG-YGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
A VF K ++SW++++SGL+ G +G EA+ F +M R G+ D +FT V++ C
Sbjct: 227 GARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
Query: 393 SH 394
H
Sbjct: 287 CH 288
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 29/277 (10%)
Query: 80 VISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQIN 139
+I+ +K Q L+IH + T V +P+V F++ A L+D +++ FE I
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALED---AKKAFEDIT 434
Query: 140 -RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSF---AVKSCIRF---L 192
R I+S +N MI ++ + + L ++ AA + + + +V + I F +
Sbjct: 435 FREIIS-WNAMISGFAQNGFSHEALKMFLS-----AAAETMPNEYTFGSVLNAIAFAEDI 488
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
+ G + H ++ K G S ++ +A++D+Y++ D++ KVF+EM Q++ W +IS
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
+ ++LF M PD VT ++ G I N ++E
Sbjct: 549 AYSSHGDFETVMNLFHKM--IKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE--- 603
Query: 313 GGAINLSNS------LIAMYSRCGCLDKAYEVFMGTP 343
NL S ++ M R G L +A E+ P
Sbjct: 604 --VYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 117/278 (42%), Gaps = 21/278 (7%)
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRD-TVAWNVMISCCVRNN 258
+HCN +S S L YS R A K+FD QR+ T + N IS +R N
Sbjct: 7 LHCN------RSKSFLFQR---FYSPYRI---AHKLFDGSSQRNATTSINHSISESLRRN 54
Query: 259 RTRDALSLF-DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAIN 317
ALS+F + +Q D+VT L+ G +IH + G+ +
Sbjct: 55 SPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVC 112
Query: 318 LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
+SN+++ MY + G D A +F + VVSW+ ++SG N + A+ M+ G
Sbjct: 113 VSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAG 169
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA 437
+ D T++ LS C S G+ ++ + G+ ++ + + R+G A
Sbjct: 170 VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV-KTGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 438 YEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIER 475
V M+ K D W +LL G VI R
Sbjct: 229 RRVFDEMSFK-DMISWNSLLSGLSQEGTFGFEAVVIFR 265
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 221/458 (48%), Gaps = 34/458 (7%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC-IRFLD 193
F ++ + + +N MI ++ + L L+++M + + S + +C +
Sbjct: 161 FVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSN 220
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
+V G VH + K+G S +V+ Y++ DDA + + + V+WN +I
Sbjct: 221 VVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDA 280
Query: 254 CVRNNRTRDALSLFDV-----------------------------MQSTSNKCEPDDVTX 284
C++ T AL +F + ++ + + D
Sbjct: 281 CMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAY 340
Query: 285 XXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPN 344
L G+ IH ++ G+ G + N+L+ +Y++CG + +A F N
Sbjct: 341 GAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIAN 400
Query: 345 KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSF 404
K +VSW+ M+ V+G +A++ ++ M GI+PD+ TF G+L+ CSHSGLV+EG
Sbjct: 401 KDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMI 460
Query: 405 FDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAV----KPDPTIWRTLLGAC 460
F+ M+ ++ I + H CM+D+ GR G L +A ++ TT + + + W TLLGAC
Sbjct: 461 FESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGAC 520
Query: 461 RIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
H H LG V + L + E +VLL N+Y S G W++ +VR M E+ ++ TPG
Sbjct: 521 STHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPG 580
Query: 521 CCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLK 558
C IE+ V FVV D SH R E+ ETL+ + +++
Sbjct: 581 CSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 47/278 (16%)
Query: 234 KVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXX 293
+VFD MP+ DTVAWN M++ R ++A++LF ++ + K PDD +
Sbjct: 25 QVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK--PDDYSFTAILSTCAS 82
Query: 294 XNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG------------CLDK------- 334
+++FG +I + ++ G+ ++ ++NSLI MY +C C D
Sbjct: 83 LGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWC 142
Query: 335 --------------AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRP 380
A +VF+ P + +W+ MISG A G + + F+EM +P
Sbjct: 143 SLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKP 202
Query: 381 DDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF----GITPNIHHYGCMVDLLGRAGLLDK 436
D TF+ +++ACS D + RM+ G + + ++ + G D
Sbjct: 203 DCYTFSSLMNACS----ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDD 258
Query: 437 AYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIE 474
A + ++ V + W +++ AC G E+ +E
Sbjct: 259 AMRELESIEVLTQVS-WNSIIDACMKIGET---EKALE 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 7/205 (3%)
Query: 321 SLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRP 380
S IA ++ G + A +VF G P V+W+ M++ + G +EAI F +++ +P
Sbjct: 9 SKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKP 68
Query: 381 DDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEV 440
DD +FT +LS C+ G V G ++ G ++ ++D+ G+ A +V
Sbjct: 69 DDYSFTAILSTCASLGNVKFGRK-IQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 441 ITTMAVKP-DPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGH 499
M + W +LL A + + E ++ +E+ + A + ++++ ++ G
Sbjct: 128 FRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 500 WEKVAEVRTLMKEKAIQTTPGCCTI 524
E + M E + P C T
Sbjct: 185 LESCLSLFKEMLESEFK--PDCYTF 207
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 280/586 (47%), Gaps = 38/586 (6%)
Query: 7 SHSVHSSSNR--FVLAATTLHSPSLSLSRCIHLLHSPQPNPHHPVEPAINL-APIPHHKR 63
+ SVH R F L T +S S+C LL S + + A++ A I + R
Sbjct: 221 ARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 64 NQ--PTPISSFPPSHKEQV---ISTIKSVSQKPHLL-------QIHAHIVCTTLVHDP-- 109
+ + SF K + + T+ SV L+ +H V L DP
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL--DPNY 338
Query: 110 -AVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRD 168
++SL + A G L D R +R IV+ +N++I Y+ + L L+R
Sbjct: 339 ESLSLALVELYAECGKLSDCETVLRVVS--DRNIVA-WNSLISLYAHRGMVIQALGLFRQ 395
Query: 169 MRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRK 228
M + I + + + ++ +C + G Q+H +V + SD + +++D+YS+
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT-DVSDEFVQNSLIDMYSKSGS 454
Query: 229 GDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXX 288
D A VF+++ R V WN M+ +N + +A+SLFD M + E ++VT
Sbjct: 455 VDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS--YLEMNEVTFLAVI 512
Query: 289 XXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVV 348
SLE G+ +H+ ++ G +LI MY++CG L+ A VF ++S+V
Sbjct: 513 QACSSIGSLEKGKWVHHKLIISGLKDLFT-DTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 349 SWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM 408
SWS+MI+ ++G AI F +M G +P++ F VLSAC HSG V+EG +F+ M
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM 631
Query: 409 IGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTL 468
FG++PN H+ C +DLL R+G L +AY I M D ++W +L+ CRIH + +
Sbjct: 632 -KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDI 690
Query: 469 GERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKG 528
+ + L ++ + G Y LL NIY+ G WE+ +R+ MK ++ PG IE+
Sbjct: 691 IKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQ 750
Query: 529 VVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVD 574
V F + + + EIY L G + L++E H VD
Sbjct: 751 KVFRFGAGEENRIQTDEIYRFL----------GNLQNLTNEEHVVD 786
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 201/480 (41%), Gaps = 51/480 (10%)
Query: 79 QVISTIKSVSQKPHLLQIHAHIVCT-TLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQ 137
Q + +S S + Q+HAH++ T L DP + A G P SR FE
Sbjct: 3 QYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGS---PDSSRLVFEA 59
Query: 138 INRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD---- 193
P + +I+ + LY R ++ S F S +R
Sbjct: 60 FPYPDSFMYGVLIKCNVWCHLLDAAIDLYH----RLVSETTQISKFVFPSVLRACAGSRE 115
Query: 194 --IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMI 251
VGG +VH + K G D+++ T+++ +Y Q DA KVFD MP RD VAW+ ++
Sbjct: 116 HLSVGG-KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLV 174
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG 311
S C+ N AL +F M + EPD VT L +H I +
Sbjct: 175 SSCLENGEVVKALRMFKCM--VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM 232
Query: 312 YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
+ L NSL+ MYS+CG L + +F K+ VSW+AMIS + ++A+ +F
Sbjct: 233 FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSF-------------------FDRMIGEF 412
EM + GI P+ T VLS+C GL+ EG S + E
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAEC 352
Query: 413 GITP------------NIHHYGCMVDLLGRAGLLDKA---YEVITTMAVKPDPTIWRTLL 457
G NI + ++ L G++ +A + + T +KPD + +
Sbjct: 353 GKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSI 412
Query: 458 GACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
AC G V LG+++ +I + L+++YS +G + + V +K +++ T
Sbjct: 413 SACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVT 472
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 181/413 (43%), Gaps = 16/413 (3%)
Query: 47 HPVEPAINLAPIPHHKRNQPTPISSFP-PSHKEQVISTIKSVSQKPHLLQIHAHIVCTTL 105
H ++ AI+L H ++ T IS F PS + + +S ++H I+ +
Sbjct: 79 HLLDAAIDLY---HRLVSETTQISKFVFPSVLRACAGSREHLSVGG---KVHGRIIKGGV 132
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYL 165
D + L +G L D + + F+ + + ++T++ + + K L +
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSD---AEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRM 189
Query: 166 YRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQ 225
++ M G+ + ++ V+ C + VH + + D L +++ +YS+
Sbjct: 190 FKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSK 249
Query: 226 CRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXX 285
C + ++F+++ +++ V+W MIS R + AL F M + EP+ VT
Sbjct: 250 CGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM--IKSGIEPNLVTLY 307
Query: 286 XXXXXXXXXNSLEFGERIHNYIMERGYG-GAINLSNSLIAMYSRCGCLDKAYEVFMGTPN 344
+ G+ +H + + R +LS +L+ +Y+ CG L V +
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD 367
Query: 345 KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSF 404
+++V+W+++IS A G +A+ F +M I+PD T +SAC ++GLV G
Sbjct: 368 RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Query: 405 FDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
+I + + ++D+ ++G +D A V + + T W ++L
Sbjct: 428 HGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQIKHRSVVT-WNSML 477
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 189/360 (52%), Gaps = 33/360 (9%)
Query: 296 SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMIS 355
SLE +++H++ ++ + G L+N +I+M+ C + A VF +K + SW M+
Sbjct: 251 SLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMC 310
Query: 356 GLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGIT 415
+ NG G +A+ FEEM + G++P+++TF V AC+ G ++E FD M E GI+
Sbjct: 311 AYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGIS 370
Query: 416 PNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIER 475
P HY ++ +LG+ G L +A + I + +P W + R+HG + L + + E
Sbjct: 371 PKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEEL 430
Query: 476 LIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVV 535
++++ +A ++N K+ ++ T +E + + F
Sbjct: 431 MVDVDPSKA-----VIN---------KIPTPPPKSFKETNMVTSKSRILEFRNLT--FYK 474
Query: 536 DDVSH--KRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAF 593
D+ +KG + YV + LH +D + K L YHSE+LAIA+
Sbjct: 475 DEAKEMAAKKGVV---------------YVPDTRFVLHDIDQEAKEQALLYHSERLAIAY 519
Query: 594 GVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
G++ TPP TL + N+RVC DCHNF+K+ S + R +I+RD+KRFHHF+ G+CSC DYW
Sbjct: 520 GIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 186 KSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTV 245
+SC + +VH + + + D L V+ ++ +C DA +VFD M +D
Sbjct: 244 ESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMD 303
Query: 246 AWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHN 305
+W++M+ N DAL LF+ M T + +P++ T +E +H
Sbjct: 304 SWHLMMCAYSDNGMGDDALHLFEEM--TKHGLKPNEETFLTVFLACATVGGIEEA-FLHF 360
Query: 306 YIMERGYGGAINLSNSL--IAMYSRCGCLDKAYEVFMGTPNKSVVS-WSAMISGLAVNG 361
M+ +G + + L + + +CG L +A + P + W AM + ++G
Sbjct: 361 DSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 221/474 (46%), Gaps = 41/474 (8%)
Query: 92 HLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIR 151
HL Q+HA ++ + D + ++ L S D Y+ + I + + N + +
Sbjct: 37 HLFQVHARLITSGNFWDSSWAIRLLKS---SSRFGDSSYTVSIYRSIGKLYCA--NPVFK 91
Query: 152 AYSMSDSPQKGLYLYRDMRRRGIAANPLSSSF-AVKSCIRFLDIV-GGVQVHCNVFKDGH 209
AY +S SP++ L Y D+ R G P S +F ++ SCI V G H K G
Sbjct: 92 AYLVSSSPKQALGFYFDILRFGFV--PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGC 149
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDV 269
+ ++M +Y+ C D A K+F E+P+RD V+WN +I+ VRN A LFD
Sbjct: 150 DQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDE 209
Query: 270 M-----------------------------QSTSNKCEPDDVTXXXXXXXXXXXNSLEFG 300
M + + ++ T L+ G
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEG 269
Query: 301 ERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVN 360
+H ++ ++ + +LI MY +C + A +F ++ V+W+ MI ++
Sbjct: 270 RSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLH 329
Query: 361 GYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHH 420
G + +E FE M +RPD+ TF GVL C+ +GLV +G S++ M+ EF I PN H
Sbjct: 330 GRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGH 389
Query: 421 YGCMVDLLGRAGLLDKAYEVITTMA---VKPDPTIWRTLLGACRIHGHVTLGERVIERLI 477
CM +L AG ++A E + + V P+ T W LL + R G+ TLGE + + LI
Sbjct: 390 QWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLI 449
Query: 478 ELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVH 531
E Y LL+NIYS G WE V VR ++KE+ I PGC ++LK +VH
Sbjct: 450 ETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/333 (34%), Positives = 173/333 (51%), Gaps = 13/333 (3%)
Query: 322 LIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPD 381
L+ MYS CG ++A VF K++ +W +I A NG+G++AI+ F + G PD
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 382 DQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVI 441
Q F G+ AC G VDEG+ F+ M ++GI P+I Y +V++ G LD+A E +
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
Query: 442 TTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWE 501
M ++P+ +W TL+ R+HG++ LG+ E + L LN S G
Sbjct: 415 ERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTR-------LNKQSREGFIP 467
Query: 502 -KVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIA 560
K ++V +K G +K + EF D + E+++ L ++ +
Sbjct: 468 VKASDVEKESLKKRSGILHG-----VKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEV 522
Query: 561 GYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFL 620
GYV E LH +D + K +L HSE++A A VL + P V N+RVCVDCHN L
Sbjct: 523 GYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNAL 582
Query: 621 KLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
K+ S + R+VI RD KRFH + G C+C DYW
Sbjct: 583 KIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 219 VMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
++++YS C ++A VF++M +++ W ++I C +N DA+ +F + N
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI-- 352
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN--SLIAMYSRCGCLDKAY 336
PD ++ G +H M R YG A ++ + SL+ MY+ G LD+A
Sbjct: 353 PDGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEAL 411
Query: 337 EVFMGTPNK-SVVSWSAMISGLAVNG 361
E P + +V W +++ V+G
Sbjct: 412 EFVERMPMEPNVDVWETLMNLSRVHG 437
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 222/444 (50%), Gaps = 14/444 (3%)
Query: 86 SVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSH 145
++ + H L I TLV + ++++ +D + + FE + +
Sbjct: 305 AMGHQVHGLAIKTGYEKYTLVSNATMTMY--------SSFEDFGAAHKVFESLEEKDLVT 356
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+NTMI +Y+ + + + +Y+ M G+ + + + + + LD++ VQ C +
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD-LDVLEMVQA-C-II 413
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALS 265
K G S + A++ YS+ + + A +F+ +++ ++WN +IS N + L
Sbjct: 414 KFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLE 473
Query: 266 LFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAM 325
F + + + PD T +SL G + H Y++ G + N+LI M
Sbjct: 474 RFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINM 533
Query: 326 YSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG-IRPDDQT 384
YS+CG + + EVF K VVSW+++IS + +G G+ A+ ++ MQ G + PD T
Sbjct: 534 YSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAAT 593
Query: 385 FTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEV--IT 442
F+ VLSACSH+GLV+EG+ F+ M+ G+ N+ H+ C+VDLLGRAG LD+A + I+
Sbjct: 594 FSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKIS 653
Query: 443 TMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEK 502
+ +W L AC HG + LG+ V + L+E + + YV L NIY+ AG W++
Sbjct: 654 EKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKE 713
Query: 503 VAEVRTLMKEKAIQTTPGCCTIEL 526
E R + GC + L
Sbjct: 714 AEETRRAINMIGAMKQRGCSWMRL 737
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 184/441 (41%), Gaps = 59/441 (13%)
Query: 119 VALSGPLQDPIYSRRFFEQI-NRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAAN 177
++ S L D Y+ F+++ R V+ +N MI S + + L+R+M + G+ +
Sbjct: 130 LSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHD 189
Query: 178 PLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFD 237
+ + C + + G QVH V K G S ++ A++ +Y C+ DAC VF+
Sbjct: 190 KFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE 248
Query: 238 E--MPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXN 295
E + RD V +NV+I R L +++++ P D+T +
Sbjct: 249 ETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEAS---LRPTDLTFVSVMGSC---S 302
Query: 296 SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMIS 355
G ++H ++ GY +SN+ + MYS A++VF K +V+W+ MIS
Sbjct: 303 CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMIS 362
Query: 356 GLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVL-------------------------- 389
GK A+ ++ M IG++PD+ TF +L
Sbjct: 363 SYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIE 422
Query: 390 ------SACSHSGLVDEGMSFFDR-----MIGEFGITPNIHHYGCMVDLLGR-AGLLDKA 437
SA S +G +++ F+R +I I +H G + L R + LL+
Sbjct: 423 ISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESE 482
Query: 438 YEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERV---IERLIELKAQEAGDYVLLLNIY 494
++ PD TLL C + LG + + R + K G+ L+N+Y
Sbjct: 483 VRIL------PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGN--ALINMY 534
Query: 495 SSAGHWEKVAEVRTLMKEKAI 515
S G + EV M EK +
Sbjct: 535 SQCGTIQNSLEVFNQMSEKDV 555
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 248 NVMISCCVRNNRTRDALSLF-DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
N ++ R+ R+AL LF DV + T+ + PD + FG ++H Y
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLR--PDQYSVSLAITTARHLRDTIFGGQVHCY 82
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCL-------------------------------DKA 335
+ G ++SN+L+++Y R G L + A
Sbjct: 83 AIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYA 142
Query: 336 YEVFMGTPNKSVVS-WSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
+EVF P + V+ W+AMI+G +GY + ++E F EM ++G+R D F +LS C +
Sbjct: 143 FEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY 202
Query: 395 SGL 397
L
Sbjct: 203 GSL 205
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 201/387 (51%), Gaps = 7/387 (1%)
Query: 143 VSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIV-GGVQVH 201
++ +N++I + S + L ++ M R G + L + S L +V G H
Sbjct: 545 LTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFH 604
Query: 202 CNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTR 261
K + D+ L ++ +Y +C+ + A KVF + + +WN +IS +N R
Sbjct: 605 GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 664
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
+ LF + K EP+++T S +G + H +++ RG+ +S +
Sbjct: 665 EVFQLFRNL-----KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAA 719
Query: 322 LIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG-IRP 380
L+ MYS CG L+ +VF + S+ +W+++IS +G G++A+E F+E+ + P
Sbjct: 720 LVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 381 DDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEV 440
+ +F +LSACSHSG +DEG+S++ +M +FG+ P H +VD+LGRAG L +AYE
Sbjct: 780 NKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEF 839
Query: 441 ITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHW 500
IT + +W LL AC HG LG+ V E L E++ A Y+ L N Y G W
Sbjct: 840 ITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGW 899
Query: 501 EKVAEVRTLMKEKAIQTTPGCCTIELK 527
E+ +R ++++ A++ PG I+++
Sbjct: 900 EEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 173/373 (46%), Gaps = 28/373 (7%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
R IVS +NT++ + P+K L ++ M G A+ ++ S + +C ++ G
Sbjct: 252 RDIVS-WNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGES 310
Query: 200 VHCNVFKDGHQSDS--LLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRN 257
+H V K G+ ++ + +++ +YS+C + A VF+E+ RD ++ N +++ N
Sbjct: 311 LHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAAN 370
Query: 258 NRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG-AI 316
+A + + MQS +K +PD T + G +H Y + A+
Sbjct: 371 GMFEEAFGILNQMQSV-DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRAL 429
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM--Q 374
+ NS+I MY +CG +A +F T ++ +VSW++MIS + NG+ +A F+E+ +
Sbjct: 430 EVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE 489
Query: 375 RIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLL 434
+ T +L++C S D +I FG ++H + L + G L
Sbjct: 490 YSCSKFSLSTVLAILTSCDSS----------DSLI--FG--KSVHCW------LQKLGDL 529
Query: 435 DKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIY 494
A+ + TM+ D T W +++ C GH R + + + + D + LL
Sbjct: 530 TSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSR-EGKIRHDLITLLGTI 588
Query: 495 SSAGHWEKVAEVR 507
S++G+ V + R
Sbjct: 589 SASGNLGLVLQGR 601
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 3/220 (1%)
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNR 259
VHC K G D + ++ Y + + + +FDE+ ++D + WN MI+ +N R
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 260 TRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLS 319
A+ LF M N E D T + +H +E G G +L
Sbjct: 169 YIAAVGLFIEMIHKGN--EFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 320 NSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR 379
N+L+ +Y++ L A VF ++ +VSW+ +++ NG+ +++++ F+ M G
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 380 PDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
D TF+ V+SACS + G S +I + G +P H
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVI-KSGYSPEAH 325
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 203/394 (51%), Gaps = 7/394 (1%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDI 194
F+Q+ + MI + + + G+ L+R M+R + N ++ + +C+ L+
Sbjct: 208 FDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE-LNY 266
Query: 195 VGGV--QVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
+ ++H F+ G +D L A M +Y +C + +F+ RD V W+ MIS
Sbjct: 267 GSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMIS 326
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
+ ++L + M+ E + VT L F +H+ I++ G+
Sbjct: 327 GYAETGDCSEVMNLLNQMRKEG--IEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF 384
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
I L N+LI MY++CG L A EVF K +VSWS+MI+ ++G+G EA+E F+
Sbjct: 385 MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKG 444
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M + G DD F +LSAC+H+GLV+E + F + G++ + + HY C ++LLGR G
Sbjct: 445 MIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ-AGKYHMPVTLEHYACYINLLGRFG 503
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVI-ERLIELKAQEAGDYVLLL 491
+D A+EV M +KP IW +LL AC HG + + ++I L++ + +YVLL
Sbjct: 504 KIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLS 563
Query: 492 NIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE 525
I++ +G++ EVR +M+ + + G IE
Sbjct: 564 KIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR 256
G Q+HC K G D+++ +++ +Y++ + KVFDEM RDTV++ +I+ C +
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM-ERGYGGA 315
+ +A+ L M + + V +S + H ++ + +
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSS-KVARMFHALVLVDERMQES 184
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
+ LS +L+ MY + A+ VF K+ VSW+AMISG N + ++ F MQR
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
Query: 376 IGIRPDDQTFTGVLSACSH----SGLVDE--GMSF 404
+RP+ T VL AC S LV E G SF
Sbjct: 245 ENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSF 279
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 7/234 (2%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
SR FE V +++MI Y+ + + + L MR+ GI AN ++ V +C
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTN 365
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
+ VH + K G S LL A++D+Y++C A +VF E+ ++D V+W+ M
Sbjct: 366 STLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSM 425
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
I+ + +AL +F M + E DD+ +E + I +
Sbjct: 426 INAYGLHGHGSEALEIFKGMIKGGH--EVDDMAFLAILSACNHAGLVEEAQTI--FTQAG 481
Query: 311 GYGGAINLSN--SLIAMYSRCGCLDKAYEVFMGTPNK-SVVSWSAMISGLAVNG 361
Y + L + I + R G +D A+EV + P K S WS+++S +G
Sbjct: 482 KYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHG 535
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 208/411 (50%), Gaps = 26/411 (6%)
Query: 122 SGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSS 181
SG L + +RR F++I +N +I +Y+ +KG DM A L S
Sbjct: 183 SGELDE---ARRVFDKIPEKDAVSWNLIISSYA-----KKG-----DMGN----ACSLFS 225
Query: 182 SFAVKSCIRFLDIVGGVQVHCNVFKDGH-------QSDSLLLTAVMDLYSQCRKGDDACK 234
+ +KS + ++GG V+C K Q + + ++ Y++ A +
Sbjct: 226 AMPLKSPASWNILIGGY-VNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEE 284
Query: 235 VFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXX 294
+F M ++D + ++ MI+C +N + +DAL LF M ++ +PD++T
Sbjct: 285 LFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQL 344
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMI 354
+ FG + +YI E G LS SLI +Y + G KA+++F K VS+SAMI
Sbjct: 345 GNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMI 404
Query: 355 SGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGI 414
G +NG EA F M I P+ TFTG+LSA SHSGLV EG F+ M + +
Sbjct: 405 MGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNL 463
Query: 415 TPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIE 474
P+ HYG MVD+LGRAG L++AYE+I +M ++P+ +W LL A +H +V GE
Sbjct: 464 EPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACS 523
Query: 475 RLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE 525
++L+ G L IYSS G W+ VR +KEK + T GC +E
Sbjct: 524 HCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 184/430 (42%), Gaps = 30/430 (6%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+HA +V H + +H Y +R + N + ++R S
Sbjct: 21 QVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRFLS 80
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
++ + +Y DM GI + + + +++C + ++V G +H K+G
Sbjct: 81 QHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVY 140
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFD------ 268
+ T ++ LYS+ + A K FD++ +++TV+WN ++ + + +A +FD
Sbjct: 141 VQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKD 200
Query: 269 ------VMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI------MERGYGGAI 316
++ S + K + + S I Y+ + R Y A+
Sbjct: 201 AVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI--LIGGYVNCREMKLARTYFDAM 258
Query: 317 NLSN-----SLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
N ++I+ Y++ G + A E+F K + + AMI+ NG K+A++ F
Sbjct: 259 PQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFA 318
Query: 372 EM--QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLG 429
+M + I+PD+ T + V+SA S G G ++ + I E GI + ++DL
Sbjct: 319 QMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGIKIDDLLSTSLIDLYM 377
Query: 430 RAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKA-QEAGDYV 488
+ G KA+++ + + K D + ++ C I+G T + +IE K +
Sbjct: 378 KGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFT 436
Query: 489 LLLNIYSSAG 498
LL+ YS +G
Sbjct: 437 GLLSAYSHSG 446
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 186/360 (51%), Gaps = 20/360 (5%)
Query: 296 SLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMIS 355
+L+ + +H +I I+ NS+I MYS CG ++ A VF P +++ +W +I
Sbjct: 196 ALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIR 255
Query: 356 GLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGIT 415
A NG G++AI+ F ++ G +PD + F + AC G ++EG+ F+ M E+GI
Sbjct: 256 CFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGII 315
Query: 416 PNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIER 475
P + HY +V +L G LD+A + +M +P+ +W TL+ R+HG + LG+R +
Sbjct: 316 PCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDM 373
Query: 476 LIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRT--LMKEKAIQTTPGCCTIELKGVVHEF 533
+ +L A LN S AG + V++ L+KEK + G +
Sbjct: 374 VEQLDASR-------LNKESKAG----LVPVKSSDLVKEKLQRMAKGP-----NYGIRYM 417
Query: 534 VVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAF 593
D+S E+Y L + + + GYV LH VD + K L H+E+ A
Sbjct: 418 AAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFIS 477
Query: 594 GVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
L TP + +RV N+RVC DCHN LKL S + R++I RD KRFHH + G CSC +YW
Sbjct: 478 TFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 211 SDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM 270
SD +++++YS C +DA VF+ MP+R+ W +I C +N + DA+ F
Sbjct: 214 SDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRF 273
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN--SLIAMYSR 328
+ NK PD + G +H M + YG + + SL+ M +
Sbjct: 274 KQEGNK--PDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAE 330
Query: 329 CGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNG 361
G LD+A F+ + +V W +++ V+G
Sbjct: 331 PGYLDEALR-FVESMEPNVDLWETLMNLSRVHG 362
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/523 (26%), Positives = 241/523 (46%), Gaps = 74/523 (14%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q HA + + D + L+ G ++ Y+ F+++ V +N +I Y
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIE---YAEMVFDRMFEKDVVTWNLIISGYV 351
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ +Y+ + MR + + ++ + + + R ++ G +V C + +SD +
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRD------------------------------- 243
L + VMD+Y++C DA KVFD ++D
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 244 ----TVAWNVMISCCVRNNRTRDALSLFDVMQSTS-----------------NKC----- 277
+ WN++I +RN + +A +F MQS+ N C
Sbjct: 472 VPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI 531
Query: 278 -----------EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER-GYGGAINLSNSLIAM 325
P+ + SL G IH YI+ + +++ SL+ M
Sbjct: 532 LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDM 591
Query: 326 YSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTF 385
Y++CG ++KA +VF + +AMIS A+ G KEAI + ++ +G++PD+ T
Sbjct: 592 YAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITI 651
Query: 386 TGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMA 445
T VLSAC+H+G +++ + F ++ + + P + HYG MVDLL AG +KA +I M
Sbjct: 652 TNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP 711
Query: 446 VKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAE 505
KPD + ++L+ +C L + + +L+E + + +G+YV + N Y+ G W++V +
Sbjct: 712 FKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVK 771
Query: 506 VRTLMKEKAIQTTPGCCTIELKGV--VHEFVVDDVSHKRKGEI 546
+R +MK K ++ PGC I++ G VH FV +D +H R EI
Sbjct: 772 MREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 182/384 (47%), Gaps = 19/384 (4%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+H ++V + L V+ G L D S+ F E +R V+ +N ++ Y
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDA--SKVFDEIPDRNAVA-WNALMVGYVQ 251
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLL 215
+ ++ + L+ DMR++G+ ++ S + + + G Q H +G + D++L
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311
Query: 216 LTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSN 275
T++++ Y + + A VFD M ++D V WN++IS V+ DA+ + +M+
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRL--E 369
Query: 276 KCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKA 335
K + D VT +L+ G+ + Y + + I L+++++ MY++CG + A
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 336 YEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHS 395
+VF T K ++ W+ +++ A +G EA+ F MQ G+ P+ T+ ++ + +
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 396 GLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTI 452
G VDE F +M GI PN+ + M++ + + G ++A + M ++P+
Sbjct: 490 GQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
Query: 453 WRTLLGAC----------RIHGHV 466
L AC IHG++
Sbjct: 549 ITVALSACAHLASLHIGRTIHGYI 572
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 158/342 (46%), Gaps = 23/342 (6%)
Query: 136 EQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIV 195
EQ + P + + + + + ++ L L +M R + P ++ C+ D+
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 196 GGVQVHCNVFKDG--HQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
G Q+H + K+G + + + T ++ Y++C + A +F ++ R+ +W +I
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
R AL F ++ N+ PD+ FG +H Y+++ G
Sbjct: 148 KCRIGLCEGALMGF--VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
+ +++SL MY +CG LD A +VF P+++ V+W+A++ G NG +EAI F +M
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEG-----MSFFDRMIGEFGITPNIHHYGCMVDLL 428
++ G+ P T + LSA ++ G V+EG ++ + M + + ++ ++ C V L+
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 429 GRAGLL-DKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLG 469
A ++ D+ +E D W + I G+V G
Sbjct: 326 EYAEMVFDRMFE--------KDVVTWNLI-----ISGYVQQG 354
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 202/410 (49%), Gaps = 1/410 (0%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
S R E I V + MI +K L ++ +M + G + + + V SC +
Sbjct: 299 SYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQ 358
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
G VH V + G+ D+ L +++ +Y++C D + +F+ M +RD V+WN +
Sbjct: 359 LGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAI 418
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
IS +N AL LF+ M+ + + + D T +L G+ IH ++
Sbjct: 419 ISGYAQNVDLCKALLLFEEMKFKTVQ-QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRS 477
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
+ +L+ MYS+CG L+ A F K VVSW +I+G +G G A+E +
Sbjct: 478 FIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIY 537
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
E G+ P+ F VLS+CSH+G+V +G+ F M+ +FG+ PN H C+VDLL R
Sbjct: 538 SEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCR 597
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLL 490
A ++ A++ +P + +L ACR +G + + + E +IELK +AG YV L
Sbjct: 598 AKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKL 657
Query: 491 LNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSH 540
+ +++ W+ V+E M+ ++ PG IE+ G F ++ SH
Sbjct: 658 GHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 181/414 (43%), Gaps = 26/414 (6%)
Query: 94 LQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
L IH ++ D +S ++ A G L ++R+ FE++ V H+ MI Y
Sbjct: 66 LSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLA---HARKVFEEMRERDVVHWTAMIGCY 122
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGV----QVHC---NVFK 206
S + + L +MR +GI P++ L+++ GV Q+ C
Sbjct: 123 SRAGIVGEACSLVNEMRFQGIKPGPVT----------LLEMLSGVLEITQLQCLHDFAVI 172
Query: 207 DGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSL 266
G D ++ ++++LY +C DA +FD+M QRD V+WN MIS + L L
Sbjct: 173 YGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKL 232
Query: 267 FDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMY 326
M+ + PD T LE G +H I++ G+ ++L +LI MY
Sbjct: 233 LYRMRG--DGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMY 290
Query: 327 SRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFT 386
+CG + +Y V PNK VV W+ MISGL G ++A+ F EM + G +
Sbjct: 291 LKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIA 350
Query: 387 GVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAV 446
V+++C+ G D G S ++ G T + ++ + + G LDK+ + M
Sbjct: 351 SVVASCAQLGSFDLGASVHGYVL-RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN- 408
Query: 447 KPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDY--VLLLNIYSSAG 498
+ D W ++ + + + E + Q+ + V LL SSAG
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAG 462
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 144/313 (46%), Gaps = 7/313 (2%)
Query: 145 HFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNV 204
+FN+ I S ++ L + M + + + +K+C + G+ +H V
Sbjct: 13 YFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 205 FKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDAL 264
+G SD + +++++LY++ A KVF+EM +RD V W MI C R +A
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 265 SLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIA 324
SL + M+ K P VT L+ +H++ + G+ I + NS++
Sbjct: 133 SLVNEMRFQGIK--PGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLN 187
Query: 325 MYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQT 384
+Y +C + A ++F + +VSW+ MISG A G E ++ M+ G+RPD QT
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 385 FTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM 444
F LS ++ G +++ + G ++H ++ + + G + +Y V+ T+
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIV-KTGFDVDMHLKTALITMYLKCGKEEASYRVLETI 306
Query: 445 AVKPDPTIWRTLL 457
K D W ++
Sbjct: 307 PNK-DVVCWTVMI 318
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 95/234 (40%), Gaps = 30/234 (12%)
Query: 261 RDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN 320
+ LS F M +NK PD T L FG IH ++ G+ +S+
Sbjct: 28 KQVLSTFSSM--LANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISS 85
Query: 321 SLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRP 380
SL+ +Y++ G L A +VF + VV W+AMI + G EA EM+ GI+P
Sbjct: 86 SLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKP 145
Query: 381 DDQTFTGVLSA--------CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
T +LS C H V G FD I N++ C D +G A
Sbjct: 146 GPVTLLEMLSGVLEITQLQCLHDFAVIYG---FDCDIAVMNSMLNLY---CKCDHVGDAK 199
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGD 486
L E + D W T+ I G+ ++G + +++L + GD
Sbjct: 200 DLFDQME-------QRDMVSWNTM-----ISGYASVGN--MSEILKLLYRMRGD 239
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 230/450 (51%), Gaps = 31/450 (6%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA-----NPLSSSFAVKSC 188
F E R IVS +N+M++A + + L+ M RR + + + L+ + V
Sbjct: 163 FDEMPERNIVS-WNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEA 221
Query: 189 IRFLD-------------IVGGVQVHC-----NVFKDGHQSDSLLLTAVMDLYSQCRKGD 230
R D I G Q + +F+ + D ++ + + R+ +
Sbjct: 222 RRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMN 281
Query: 231 DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX 290
AC +FD MP+++ ++W MI+ V N +AL++F M + +P+ T
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGS-VKPNVGTYVSILSA 340
Query: 291 XXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMG--TPNKSVV 348
L G++IH I + + ++++L+ MYS+ G L A ++F + ++
Sbjct: 341 CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLI 400
Query: 349 SWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM 408
SW++MI+ A +G+GKEAIE + +M++ G +P T+ +L ACSH+GLV++GM FF +
Sbjct: 401 SWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDL 460
Query: 409 IGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTL 468
+ + + HY C+VDL GRAG L I + + + +L AC +H V++
Sbjct: 461 VRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSI 520
Query: 469 GERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKG 528
+ V+++++E + +AG YVL+ NIY++ G E+ AE+R MKEK ++ PGC +++
Sbjct: 521 AKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGK 580
Query: 529 VVHEFVVDDVSHKRKGEIYETLDDINKQLK 558
H FVV D SH + +E LD I L+
Sbjct: 581 QNHLFVVGDKSHPQ----FEALDSILSDLR 606
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 180/390 (46%), Gaps = 63/390 (16%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
F E R +VS +NTMI Y+ S K L L+ +M R I + S ++ L
Sbjct: 132 FQEMPERNVVS-WNTMIDGYAQSGRIDKALELFDEMPERNIVS--------WNSMVKALV 182
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
G + N+F+ + D + TA++D ++ K D+A ++FD MP+R+ ++WN MI+
Sbjct: 183 QRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITG 242
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+NNR +A LF VM ER +
Sbjct: 243 YAQNNRIDEADQLFQVMP-------------------------------------ERDFA 265
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
N++I + R ++KA +F P K+V+SW+ MI+G N +EA+ F +M
Sbjct: 266 SW----NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
Query: 374 QRIG-IRPDDQTFTGVLSACSH-SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
R G ++P+ T+ +LSACS +GLV EG ++I + N ++++ ++
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLV-EGQQIH-QLISKSVHQKNEIVTSALLNMYSKS 379
Query: 432 GLLDKAYEVITT-MAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ----EAGD 486
G L A ++ + + D W +++ HGH G+ IE +++ A
Sbjct: 380 GELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH---GKEAIEMYNQMRKHGFKPSAVT 436
Query: 487 YVLLLNIYSSAGHWEKVAE-VRTLMKEKAI 515
Y+ LL S AG EK E + L++++++
Sbjct: 437 YLNLLFACSHAGLVEKGMEFFKDLVRDESL 466
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 21/234 (8%)
Query: 226 CRKGD--DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVT 283
C+ G +A K+FD +P+RD V W +I+ ++ R+A LFD + S N VT
Sbjct: 57 CKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNV-----VT 111
Query: 284 XXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTP 343
L E + + ER + N++I Y++ G +DKA E+F P
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERN----VVSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 344 NKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMS 403
+++VSW++M+ L G EA+ FE M R D ++T ++ + +G VDE
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 404 FFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLL 457
FD M NI + M+ + +D+A ++ M + D W T++
Sbjct: 224 LFDCM-----PERNIISWNAMITGYAQNNRIDEADQLFQVMPER-DFASWNTMI 271
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 322 LIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPD 381
LI + G + +A ++F G P + VV+W+ +I+G G +EA E F+ R+ R +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD---RVDSRKN 108
Query: 382 DQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVI 441
T+T ++S S + F M N+ + M+D ++G +DKA E+
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEM-----PERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 442 TTMAVKPDPTI--WRTLLGACRIHGHVTLGERVIERL 476
M P+ I W +++ A G + + ER+
Sbjct: 164 DEM---PERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 227/427 (53%), Gaps = 15/427 (3%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
RP F T+I + + S + G L+ + G+A+N S AV +C L + +
Sbjct: 90 RPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGS-AVLNCYVKLSTLTDAR 148
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNR 259
C F D + + +T ++ Y + + ++A +F MP+R V WN +I + R
Sbjct: 149 -RC--FDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGR 205
Query: 260 TRDALSLF-DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHN-YIMERGYGGAIN 317
+A++ F D+++ P++ T S G+ IH I G +
Sbjct: 206 NEEAVNTFVDMLRE--GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVF 263
Query: 318 LSNSLIAMYSRCGCLDKAYEVF--MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
+ NSLI+ YS+CG ++ + F + +++VSW++MI G A NG G+EA+ FE+M +
Sbjct: 264 VWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVK 323
Query: 376 -IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNI---HHYGCMVDLLGRA 431
+RP++ T GVL AC+H+GL+ EG +F++ + ++ PN+ HY CMVD+L R+
Sbjct: 324 DTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRS 382
Query: 432 GLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLL 491
G +A E+I +M + P W+ LLG C+IH + L + +++EL ++ YV+L
Sbjct: 383 GRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLS 442
Query: 492 NIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLD 551
N YS+ +W+ V+ +R MKE ++ GC IE++ + FV D +++ K E+Y L
Sbjct: 443 NAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLA 502
Query: 552 DINKQLK 558
+++ L+
Sbjct: 503 LVSQHLE 509
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 34/239 (14%)
Query: 231 DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX 290
+A KVFDE+P+ D ++ +I V+ +R +A F + P++ T
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLG--IRPNEFTFGTVIGS 102
Query: 291 XXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCL------------------ 332
++ G+++H Y ++ G + + ++++ Y + L
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 333 -------------DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR 379
++A +F P +SVV+W+A+I G + G +EA+ F +M R G+
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 380 -PDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA 437
P++ TF ++A S+ G S I G N+ + ++ + G ++ +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 197/408 (48%), Gaps = 35/408 (8%)
Query: 147 NTMIRAYSMSDSPQKGLYLYRDMRRRGIAA-NPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
N +I Y + +L+R +R +GI + N L +SF
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFV--------------------- 371
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALS 265
D+ L + L+S+ + + C V + + V W +I C R D+L
Sbjct: 372 ------DAGKLDEALSLFSELEEMNHVCNV-----KANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 266 LFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAM 325
F MQ + K + VT +L G IH +++ I + N+L+ M
Sbjct: 421 YFRQMQFS--KVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNM 478
Query: 326 YSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTF 385
Y++CG L + VF +K ++SW+++I G ++G+ ++A+ F+ M G PD
Sbjct: 479 YAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIAL 538
Query: 386 TGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMA 445
VLSACSH+GLV++G F M FG+ P HY C+VDLLGR G L +A E++ M
Sbjct: 539 VAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
Query: 446 VKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAE 505
++P + LL +CR+H +V + E + +L L+ + G Y+LL NIYS+ G WE+ A
Sbjct: 599 MEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESAN 658
Query: 506 VRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDI 553
VR L K+K ++ G IE+K ++F + IY L+D+
Sbjct: 659 VRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDL 706
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 213/518 (41%), Gaps = 89/518 (17%)
Query: 95 QIHAHIVCTTLV-HDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSH---FNTMI 150
Q+HA ++ + + +++ + +S A G L D +R FE ++ ++S +N+++
Sbjct: 74 QVHAQVLLSDFIFRSGSLAANLISVYARLGLLLD---ARNVFETVSLVLLSDLRLWNSIL 130
Query: 151 RAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV-HCNVFKDGH 209
+A + L LYR MR+RG+ + +++C R+L G + H V + G
Sbjct: 131 KANVSHGLYENALELYRGMRQRGLTGDGYILPLILRAC-RYLGRFGLCRAFHTQVIQIGL 189
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDV 269
+ + ++ ++ LY + + DA +F EMP R+ ++WNVMI + A+ +F+
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 270 MQSTSNKCEPDDVTXXXXXX-----------------------------------XXXXX 294
MQ K PD+VT
Sbjct: 250 MQREEFK--PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAEL 307
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMI 354
+L E++H Y+++ G+ + N+LI +Y + G + A +F NK + SW+++I
Sbjct: 308 EALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLI 367
Query: 355 SGLAVNGYGKEAIEAFEEMQRI----GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM-- 408
+ G EA+ F E++ + ++ + T+T V+ C+ G D+ + +F +M
Sbjct: 368 TSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQF 427
Query: 409 --------------------------------IGEFGITPNIHHYGCMVDLLGRAGLLDK 436
+ ++ NI +V++ + GLL +
Sbjct: 428 SKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 437 AYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG-DYVLLLNIYS 495
V + K D W +++ +HG + +R+I G V +L+ S
Sbjct: 488 GSLVFEAIRDK-DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACS 546
Query: 496 SAGHWEKVAEVRTLMKEK---AIQTTPGCCTIELKGVV 530
AG EK E+ M ++ Q C ++L G V
Sbjct: 547 HAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRV 584
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 97/229 (42%), Gaps = 10/229 (4%)
Query: 122 SGPLQDPIYSRRFFEQIN-----RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA 176
+G L + + E++N + V + ++I+ ++ L +R M+ + A
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Query: 177 NPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVF 236
N ++ + C + G ++H +V + + L+ A++++Y++C + VF
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 237 DEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNS 296
+ + +D ++WN +I + ALS+FD M S+ PD +
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM--ISSGFHPDGIALVAVLSACSHAGL 550
Query: 297 LEFGERIHNYIMERGYGGAINLSN--SLIAMYSRCGCLDKAYEVFMGTP 343
+E G I Y M + +G + ++ + R G L +A E+ P
Sbjct: 551 VEKGREIF-YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 219/437 (50%), Gaps = 25/437 (5%)
Query: 94 LQIHAHIVCTTLVHD--PAVSL-HFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMI 150
+Q+H +V L P+ SL HF + L + +RR FE + + +N ++
Sbjct: 162 IQLHCLMVKQGLESSCFPSTSLVHFYGKCGL------IVEARRVFEAVLDRDLVLWNALV 215
Query: 151 RAYSMSDSPQKGLYLYRDM-----RRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+Y ++ + L + M R RG F S + I G Q+H +F
Sbjct: 216 SSYVLNGMIDEAFGLLKLMGSDKNRFRG-------DYFTFSSLLSACRIEQGKQIHAILF 268
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALS 265
K +Q D + TA++++Y++ DA + F+ M R+ V+WN MI +N R+A+
Sbjct: 269 KVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMR 328
Query: 266 LFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAM 325
LF Q +PD++T +++ +++ + ++G ++++NSLI+
Sbjct: 329 LFG--QMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISS 386
Query: 326 YSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTF 385
YSR G L +A F +VSW+++I LA +G+ +E+++ FE M + ++PD TF
Sbjct: 387 YSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITF 445
Query: 386 TGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMA 445
VLSACSH GLV EG+ F RM + I HY C++DLLGRAG +D+A +V+ +M
Sbjct: 446 LEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMP 505
Query: 446 VKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAE 505
+P G C IH + ++L+E++ + +Y +L N Y S GHW + A
Sbjct: 506 TEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAAL 565
Query: 506 VRTLMKEKAIQ-TTPGC 521
+R + TPGC
Sbjct: 566 LRKRERRNCYNPKTPGC 582
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 172/381 (45%), Gaps = 42/381 (11%)
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT 244
++ C ++ G+Q+HC + K G +S T+++ Y +C +A +VF+ + RD
Sbjct: 149 IRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDL 208
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
V WN ++S V N +A L +M S N+ D T +E G++IH
Sbjct: 209 VLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIH 264
Query: 305 NYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGK 364
+ + Y I ++ +L+ MY++ L A E F ++VVSW+AMI G A NG G+
Sbjct: 265 AILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGR 324
Query: 365 EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDE---------------GMSFFDRMI 409
EA+ F +M ++PD+ TF VLS+C+ + E +S + +I
Sbjct: 325 EAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLI 384
Query: 410 GEFGIT---------------PNIHHYGCMVDLLGRAGLLDKAYEVITTM--AVKPDPTI 452
+ P++ + ++ L G +++ ++ +M ++PD
Sbjct: 385 SSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKIT 444
Query: 453 WRTLLGACRIHGHVTLGERVIERLIELKAQEAGD--YVLLLNIYSSAGHWEKVAEVRTLM 510
+ +L AC G V G R +R+ E EA D Y L+++ AG ++ ++V M
Sbjct: 445 FLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
Query: 511 KEK----AIQTTPGCCTIELK 527
+ A+ G C I K
Sbjct: 505 PTEPSTHALAAFTGGCNIHEK 525
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 159/357 (44%), Gaps = 21/357 (5%)
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR-- 256
Q H + K G + L ++ Y++ R+ DDA K+FDEMP R+ V WN++I ++
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 257 -NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA 315
+ R L + + D V+ +++ G ++H ++++G +
Sbjct: 117 GDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS 176
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM-- 373
S SL+ Y +CG + +A VF ++ +V W+A++S +NG EA + M
Sbjct: 177 CFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGS 236
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL 433
+ R D TF+ +LSAC +++G ++ + +I ++++ ++
Sbjct: 237 DKNRFRGDYFTFSSLLSACR----IEQGKQ-IHAILFKVSYQFDIPVATALLNMYAKSNH 291
Query: 434 LDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNI 493
L A E +M V+ + W ++ +G R+ +++ Q D + ++
Sbjct: 292 LSDARECFESMVVR-NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQP--DELTFASV 348
Query: 494 YSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETL 550
SS + + E++ + +A+ T G + + V + + S+ R G + E L
Sbjct: 349 LSSCAKFSAIWEIKQV---QAMVTKKG--SADFLSVANSLI---SSYSRNGNLSEAL 397
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 200/393 (50%), Gaps = 3/393 (0%)
Query: 129 IYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
+ + + F I P ++ +N MI Y KG+ L+ M+ RG N +
Sbjct: 158 VEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGL 217
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
I ++ VH K S S + A++++YS+C AC VF+ + + D VA +
Sbjct: 218 IDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACS 277
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+I+ R ++AL LF ++ + K PD V + G+ +H+Y++
Sbjct: 278 SLITGYSRCGNHKEALHLFAELRMSGKK--PDCVLVAIVLGSCAELSDSVSGKEVHSYVI 335
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
G I + ++LI MYS+CG L A +F G P K++VS++++I GL ++G+ A E
Sbjct: 336 RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFE 395
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
F E+ +G+ PD+ TF+ +L C HSGL+++G F+RM EFGI P HY MV L+
Sbjct: 396 KFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLM 455
Query: 429 GRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDY- 487
G AG L++A+E + ++ D I LL C +H + L E V E + + + Y
Sbjct: 456 GMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYK 515
Query: 488 VLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
V+L N+Y+ G W++V +R + E PG
Sbjct: 516 VMLSNVYARYGRWDEVERLRDGISESYGGKLPG 548
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 207/506 (40%), Gaps = 57/506 (11%)
Query: 85 KSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVS 144
+ + + + ++H+ + + L DP + AL+ D I +R+ F+ V
Sbjct: 16 RKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALN---DDLISARKLFDVFPERSVF 72
Query: 145 HFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNV 204
+N++IRAY+ + L L+ + R + + + + D G +H
Sbjct: 73 LWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIA 132
Query: 205 FKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMI---SCCVRNNRTR 261
G D + +A++ YS+ +A K+F +P D WNVMI CC ++
Sbjct: 133 IVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDK-- 190
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
++LF++MQ + +P+ T + L +H + ++ + +
Sbjct: 191 -GINLFNLMQHRGH--QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCA 247
Query: 322 LIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPD 381
L+ MYSRC C+ A VF +V+ S++I+G + G KEA+ F E++ G +PD
Sbjct: 248 LVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPD 307
Query: 382 DQTFTGVLSACS-----------HSGLVDEGM-------SFFDRMIGEFGI--------- 414
VL +C+ HS ++ G+ S M + G+
Sbjct: 308 CVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFA 367
Query: 415 ---TPNIHHYGCMVDLLGRAGLLDKAYEVIT---TMAVKPDPTIWRTLLGACRIHGHVTL 468
NI + ++ LG G A+E T M + PD + LL C G +
Sbjct: 368 GIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNK 427
Query: 469 GERVIERL-----IELKAQEAGDYVLLLNIYSSAGHWEKVAE-VRTLMK---EKAIQTTP 519
G+ + ER+ IE + + YV ++ + AG E+ E V +L K +
Sbjct: 428 GQEIFERMKSEFGIEPQTEH---YVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALL 484
Query: 520 GCCTIELKGVVHEFVVDDVSHKRKGE 545
CC + + E V +++ HK E
Sbjct: 485 SCCEVHENTHLAEVVAENI-HKNGEE 509
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 138/427 (32%), Positives = 217/427 (50%), Gaps = 18/427 (4%)
Query: 132 RRFFEQINRPIVSH-FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI- 189
RR EQ++ ++S+ + T+ ++ S +++Y A + L+ SF ++SC
Sbjct: 317 RRLGEQLHAQVISNGWETVDHDGRLAKSL---VHMYASSGLIASAQSLLNESFDLQSCNI 373
Query: 190 ---RFLDIVGGVQVHCNVFKDGHQ-SDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTV 245
R+L G ++ +F+ D + T+++D Y + A +F ++ +D V
Sbjct: 374 IINRYLK-NGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV 432
Query: 246 AWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHN 305
W VMIS V+N +A SL M K P + T ++L+ G+ IH
Sbjct: 433 TWTVMISGLVQNELFAEAASLLSDMVRCGLK--PLNSTYSVLLSSAGATSNLDQGKHIHC 490
Query: 306 YIMERG--YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYG 363
I + Y + L NSL++MY++CG ++ AYE+F K VSW++MI GL+ +G
Sbjct: 491 VIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLA 550
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGC 423
+A+ F+EM G +P+ TF GVLSACSHSGL+ G+ F M + I P I HY
Sbjct: 551 DKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYIS 610
Query: 424 MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGAC----RIHGHVTLGERVIERLIEL 479
M+DLLGRAG L +A E I+ + PD T++ LLG C R + ER RL+EL
Sbjct: 611 MIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLEL 670
Query: 480 KAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVS 539
A +V L N+Y+ G + E+R M K ++ TPGC + + G + F+ D S
Sbjct: 671 DPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKS 730
Query: 540 HKRKGEI 546
++
Sbjct: 731 ASEAAQM 737
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 16/189 (8%)
Query: 211 SDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM 270
S +++LTA+ D + +DA ++FDEMP+R+ V+WN +++ +RN A +FD M
Sbjct: 140 SWTVMLTALCD----DGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG 330
S D V+ + +E + + + E+ + S++ Y R G
Sbjct: 196 PSR------DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKN----VVTWTSMVYGYCRYG 245
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR--IGIRPDDQTFTGV 388
+ +AY +F P +++VSW+AMISG A N +EA+ F EM++ + P+ +T +
Sbjct: 246 DVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL 305
Query: 389 LSACSHSGL 397
AC G+
Sbjct: 306 AYACGGLGV 314
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 145/363 (39%), Gaps = 76/363 (20%)
Query: 208 GHQSDSLLLTAVMDLYSQCRKGD--DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALS 265
G S+ ++T +Y CR GD +A ++F EMP+R+ V+W MIS N R+AL
Sbjct: 224 GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALM 283
Query: 266 LFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF---GERIHNYIMERGYGGAIN---LS 319
LF M+ + P+ T +EF GE++H ++ G+ + L+
Sbjct: 284 LFLEMKKDVDAVSPNGETLISLAYACGGL-GVEFRRLGEQLHAQVISNGWETVDHDGRLA 342
Query: 320 NSLIAMYSRCGCLDKAYEVFMGTPN---------------------------KSV---VS 349
SL+ MY+ G + A + + + KS+ VS
Sbjct: 343 KSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVS 402
Query: 350 WSAM-------------------------------ISGLAVNGYGKEAIEAFEEMQRIGI 378
W++M ISGL N EA +M R G+
Sbjct: 403 WTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGL 462
Query: 379 RPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFG-ITPNIHHYGCMVDLLGRAGLLDKA 437
+P + T++ +LS+ + +D+G + P++ +V + + G ++ A
Sbjct: 463 KPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDA 522
Query: 438 YEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE-LKAQEAGDYVLLLNIYSS 496
YE+ M V+ D W +++ HG L ++ + E L + + + V L + S+
Sbjct: 523 YEIFAKM-VQKDTVSWNSMIMGLSHHG---LADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Query: 497 AGH 499
H
Sbjct: 579 CSH 581
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 202/399 (50%), Gaps = 18/399 (4%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
S R FE + + +N ++ + + ++ L ++ M R + + + S VK+C
Sbjct: 138 SVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCAS 197
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLL-TAVMDLYSQCRKGDDACKVFDEMP-QRDTVAWN 248
+ G QVH V G D ++L TA++ YS ++A KV++ + D V N
Sbjct: 198 LKILQQGKQVHAMVVVTGR--DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLN 255
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+IS C+RN ++A L ++ P+ + L G++IH +
Sbjct: 256 SLISGCIRNRNYKEAFLLM-------SRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVAL 308
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIE 368
G+ L N L+ MY +CG + +A +F P+KSVVSW++MI AVNG G +A+E
Sbjct: 309 RNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALE 368
Query: 369 AFEEM--QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
F EM + G+ P+ TF V+SAC+H+GLV EG F M ++ + P HY C +D
Sbjct: 369 IFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFID 428
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPT----IWRTLLGACRIHGHVTLGERVIERLIELKAQ 482
+L +AG ++ + ++ M + + IW +L AC ++ +T GE V RL+E
Sbjct: 429 ILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGP 488
Query: 483 E-AGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG 520
E A YVL+ N Y++ G W+ V E+R +K K + T G
Sbjct: 489 ENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAG 527
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 48/366 (13%)
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR 256
G QVH + K G ++ ++ TA++D+YS+ D+ +VF+ + ++D V+WN ++S +R
Sbjct: 103 GRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR 162
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
N + ++AL +F M + E + T L+ G+++H ++ G +
Sbjct: 163 NGKGKEALGVFAAMY--RERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVV 220
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMG-TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
L ++I+ YS G +++A +V+ + V +++ISG N + EAF M R
Sbjct: 221 -LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRN---RNYKEAFLLMSR 276
Query: 376 IGIRPDDQTFTGVLSACSH--------------------------SGLVDE----GMSFF 405
RP+ + + L+ CS +GL+D G
Sbjct: 277 --QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQ 334
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM-----AVKPDPTIWRTLLGAC 460
R I + ++ + M+D G KA E+ M V P+ + ++ AC
Sbjct: 335 ARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISAC 394
Query: 461 RIHGHVTLGERVIERLIELKAQEAGD--YVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTT 518
G V G+ + E G YV ++I S AG E++ + M E Q+
Sbjct: 395 AHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSI 454
Query: 519 PGCCTI 524
P C I
Sbjct: 455 P--CAI 458
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 12/230 (5%)
Query: 235 VFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPD--DVTXXXXXXXXX 292
+FDE+PQRD + N +S +R+ D L+LF + S PD T
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRAS----PDLSSHTFTPVLGACS 95
Query: 293 XXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSA 352
+ E G ++H ++++G +LI MYS+ G L + VF K +VSW+A
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 353 MISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF 412
++SG NG GKEA+ F M R + + T + V+ C+ ++ +G ++
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV--- 212
Query: 413 GITPN--IHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGAC 460
+T + M+ GL+++A +V ++ V D + +L+ C
Sbjct: 213 -VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 209/414 (50%), Gaps = 32/414 (7%)
Query: 127 DPIYSRRFFEQIN--RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFA 184
D + + FE+I+ R V+ MI+ Y +K L+ M F
Sbjct: 127 DAVLASGLFEEISVCRNTVTWIE-MIKGYGKRIEIEKARELFERM------------PFE 173
Query: 185 VKSCIRFLDIVGGVQVHC-------NVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFD 237
+K+ ++ ++ GV V+ F+D + ++ + + +M Y + +A +F
Sbjct: 174 LKN-VKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFY 232
Query: 238 EMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSL 297
+ RD V WN +I+ +N + DA+ F MQ EPD VT L
Sbjct: 233 RVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGY--EPDAVTVSSILSACAQSGRL 290
Query: 298 EFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGL 357
+ G +H+ I RG +SN+LI MY++CG L+ A VF +SV ++MIS L
Sbjct: 291 DVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCL 350
Query: 358 AVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPN 417
A++G GKEA+E F M+ + ++PD+ TF VL+AC H G + EG+ F M + + PN
Sbjct: 351 AIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPN 409
Query: 418 IHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLI 477
+ H+GC++ LLGR+G L +AY ++ M VKP+ T+ LLGAC++H + E+V+ ++I
Sbjct: 410 VKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVM-KII 468
Query: 478 ELKAQEAGDY-----VLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIEL 526
E Y + N+Y+ W+ +R M+++ ++ +PG ++ L
Sbjct: 469 ETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 159/345 (46%), Gaps = 28/345 (8%)
Query: 145 HFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFL-DIVGGVQVHCN 203
H + +I+ + SP + L LY +RRRG+ P +++C + +V G +H
Sbjct: 13 HVSNLIKNHISRGSPIQALVLYGGIRRRGVYF-PGWVPLILRACACVVPRVVLGKLLHSE 71
Query: 204 VFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRT--- 260
K G SD ++ ++++ +Y +C A KVFDEMP+R+ WN MI + N
Sbjct: 72 SIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLA 131
Query: 261 ----------RDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXN----SLEFGERIHNY 306
R+ ++ ++++ + E + N S+ G ++N
Sbjct: 132 SGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNR 191
Query: 307 IME--RGYGGAINLSNS-----LIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
ME R + I N+ +++ Y R G + +A +F + +V W+ +I+G A
Sbjct: 192 KMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQ 251
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
NGY +AI+AF MQ G PD T + +LSAC+ SG +D G +I GI N
Sbjct: 252 NGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHS-LINHRGIELNQF 310
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHG 464
++D+ + G L+ A V +++V+ +++ IHG
Sbjct: 311 VSNALIDMYAKCGDLENATSVFESISVRSVACC-NSMISCLAIHG 354
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 210/426 (49%), Gaps = 14/426 (3%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+H ++ D V F V G +D +R+ F ++ + ++ AY
Sbjct: 132 VHGLVLRIGFDKDVVVGTSF---VDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVK 188
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLL 215
S ++ ++ M R + S + V ++ D+V ++ F + + D +
Sbjct: 189 SGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKL----FDEMPKRDIIS 240
Query: 216 LTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSN 275
T+++D Y++ A +F+E D AW+ +I +N + +A +F M +
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM--CAK 298
Query: 276 KCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER-GYGGAINLSNSLIAMYSRCGCLDK 334
+PD+ E E++ +Y+ +R + + +LI M ++CG +D+
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDR 358
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
A ++F P + +VS+ +M+ G+A++G G EAI FE+M GI PD+ FT +L C
Sbjct: 359 AAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQ 418
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
S LV+EG+ +F+ M ++ I + HY C+V+LL R G L +AYE+I +M + + W
Sbjct: 419 SRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWG 478
Query: 455 TLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKA 514
+LLG C +HG+ + E V L EL+ Q AG YVLL NIY++ W VA +R M E
Sbjct: 479 SLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENG 538
Query: 515 IQTTPG 520
I G
Sbjct: 539 ITKICG 544
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 184/403 (45%), Gaps = 24/403 (5%)
Query: 82 STIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRP 141
+ K + HL QIHA I+ L D +L + + S YS FE++ P
Sbjct: 15 TLFKLCKSEIHLNQIHARIIRKGLEQDQ--NLISIFISSSSSSSSSLSYSSSVFERVPSP 72
Query: 142 IVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIA-ANPLSSSFAVKSCIRFLDIVGGVQV 200
+N +I+ YS + + + M R G+A + + +K C + G V
Sbjct: 73 GTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSV 132
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRT 260
H V + G D ++ T+ +D Y +C+ A KVF EMP+R+ V+W ++ V++
Sbjct: 133 HGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGEL 192
Query: 261 RDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN 320
+A S+FD+M E + + L +++ + + +R I
Sbjct: 193 EEAKSMFDLMP------ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRD----IISYT 242
Query: 321 SLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRP 380
S+I Y++ G + A ++F V +WSA+I G A NG EA + F EM ++P
Sbjct: 243 SMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKP 302
Query: 381 DDQTFTGVLSACSHSG---LVDEGMSFFDRMIGEFGITPNIHHY--GCMVDLLGRAGLLD 435
D+ G++SACS G L ++ S+ + + +F HY ++D+ + G +D
Sbjct: 303 DEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPALIDMNAKCGHMD 357
Query: 436 KAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE 478
+A ++ M + D + +++ IHG + R+ E++++
Sbjct: 358 RAAKLFEEMPQR-DLVSYCSMMEGMAIHGCGSEAIRLFEKMVD 399
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 138/352 (39%), Gaps = 47/352 (13%)
Query: 199 QVHCNVFKDGHQSD-SLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRN 257
Q+H + + G + D +L+ + S + VF+ +P T WN +I
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 258 NRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAIN 317
+ +S+ M T PD+ T + G +H ++ G+ +
Sbjct: 88 FLFFETVSILMRMMRT-GLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVV 146
Query: 318 LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
+ S + Y +C L A +VF P ++ VSW+A++ +G +EA F+ M
Sbjct: 147 VGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERN 206
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD----------- 426
+ ++ ++ SG + FD M +I Y M+D
Sbjct: 207 L----GSWNALVDGLVKSGDLVNAKKLFDEMPKR-----DIISYTSMIDGYAKGGDMVSA 257
Query: 427 ------------------LLGRA--GLLDKAYEVITTMA---VKPDPTIWRTLLGACRIH 463
+LG A G ++A++V + M VKPD I L+ AC
Sbjct: 258 RDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQM 317
Query: 464 GHVTLGERVIERLIELKAQEAGDYVL--LLNIYSSAGHWEKVAEVRTLMKEK 513
G L E+V L + + + YV+ L+++ + GH ++ A++ M ++
Sbjct: 318 GCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR 369
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 194/399 (48%), Gaps = 38/399 (9%)
Query: 84 IKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIV 143
+++ S L QIH I+ L +D + +S + G Q Y+ F Q+ P
Sbjct: 27 LRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQ---YASLVFNQLQSPST 83
Query: 144 SHFNTMIRAYSMSDSPQKGLYLYRDMR-RRGIAANPLSSSFAVKSCIRFLDIVGGVQVHC 202
+N MIR+ S++ P++ L L+ M + + F +K+C+ I G QVH
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 203 NVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFD------------------------- 237
K G +D +MDLY +C K D KVFD
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 238 ------EMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXX 291
+MP R+ V+W MI+ V+N R +A LF MQ + +P++ T
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQV--DDVKPNEFTIVNLLQAS 261
Query: 292 XXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWS 351
SL G +H+Y + G+ L +LI MYS+CG L A +VF KS+ +W+
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 352 AMISGLAVNGYGKEAIEAFEEMQRIG-IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIG 410
+MI+ L V+G G+EA+ FEEM+ + PD TF GVLSAC+++G V +G+ +F RMI
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 411 EFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPD 449
+GI+P H CM+ LL +A ++KA ++ +M PD
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 139/319 (43%), Gaps = 45/319 (14%)
Query: 181 SSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP 240
+S+ +++C F + Q+H + K +D LL+ ++ + S + A VF+++
Sbjct: 23 ASYFLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQ 79
Query: 241 QRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFG 300
T WN+MI N++ R+AL LF +M S++ + D T +S+ G
Sbjct: 80 SPSTFTWNLMIRSLSVNHKPREALLLFILMM-ISHQSQFDKFTFPFVIKACLASSSIRLG 138
Query: 301 ERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVN 360
++H ++ G+ + N+L+ +Y +CG D +VF P +S+VSW+ M+ GL N
Sbjct: 139 TQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSN 198
Query: 361 --------------------------GYGK-----EAIEAFEEMQRIGIRPDDQTFTGVL 389
Y K EA + F MQ ++P++ T +L
Sbjct: 199 SQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLL 258
Query: 390 SACSHSGLVDEGMSFFDRMIGEF----GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMA 445
A + G + G R + ++ G + ++D+ + G L A +V M
Sbjct: 259 QASTQLGSLSMG-----RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 446 VKPDPTIWRTLLGACRIHG 464
K T W +++ + +HG
Sbjct: 314 GKSLAT-WNSMITSLGVHG 331
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 219/478 (45%), Gaps = 75/478 (15%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
+HAH+V + + ++ ++ G + D +R+ F+++ + +S MI A +
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLD---ARKVFDEMPKRDISGCVVMIGACAR 94
Query: 156 SDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHC------------- 202
+ Q+ L +R+M + G+ + +K+ LD G +HC
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 203 ------------------NVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP---- 240
VF D + D ++ A++ Y+ + D+A + +M
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 241 -----------------------------------QRDTVAWNVMISCCVRNNRTRDALS 265
+ D V+W +IS V N + A
Sbjct: 215 KPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFD 274
Query: 266 LFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAM 325
F Q ++ P+ T ++ G+ IH Y + G + ++L+ M
Sbjct: 275 AFK--QMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDM 332
Query: 326 YSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTF 385
Y +CG + +A +F TP K+ V++++MI A +G +A+E F++M+ G + D TF
Sbjct: 333 YGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTF 392
Query: 386 TGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMA 445
T +L+ACSH+GL D G + F M ++ I P + HY CMVDLLGRAG L +AYE+I M
Sbjct: 393 TAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMR 452
Query: 446 VKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKV 503
++PD +W LL ACR HG++ L + L EL+ + +G+ +LL ++Y++AG WE V
Sbjct: 453 MEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 12/327 (3%)
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR 256
G +H ++ G + + ++ Y +C K DA KVFDEMP+RD VMI C R
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
N +++L F M K + V EFG+ IH +++ Y
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDR--EFGKMIHCLVLKFSYESDA 152
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
+ +SLI MYS+ G + A +VF + +V ++AMISG A N EA+ ++M+ +
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 377 GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDK 436
GI+PD T+ ++S SH +E +S ++ G P++ + ++ L +K
Sbjct: 213 GIKPDVITWNALISGFSHMR-NEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 437 AYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYV--LLL 491
A++ M + P+ TLL AC ++ G+ + + ++ G +V LL
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG-FVRSALL 330
Query: 492 NIYSSAGHWEKVAEVRTLMKEKAIQTT 518
++Y G ++E L ++ +TT
Sbjct: 331 DMYGKCGF---ISEAMILFRKTPKKTT 354
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 191/378 (50%), Gaps = 7/378 (1%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
F ++I+A S S G+ L+ +RG +P F S +RF VG ++ +F
Sbjct: 89 FPSLIKAACSSFSVSYGVALHGQALKRGFLWDP----FVQTSFVRFYGEVGDLESSRKMF 144
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALS 265
D + +++D + + D A + F MP D V+W +I+ + AL
Sbjct: 145 DDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALM 204
Query: 266 LF-DVMQSTSNKCEPDDVTXXXXXXXXXXXN--SLEFGERIHNYIMERGYGGAINLSNSL 322
+F +++Q+ P++ T + + G++IH Y+M + L +L
Sbjct: 205 VFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTAL 264
Query: 323 IAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDD 382
+ MY + G L+ A +F +K V +W+A+IS LA NG K+A+E FE M+ + P+
Sbjct: 265 LDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNG 324
Query: 383 QTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVIT 442
T +L+AC+ S LVD G+ F + E+ I P HYGC+VDL+GRAGLL A I
Sbjct: 325 ITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQ 384
Query: 443 TMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEK 502
++ +PD ++ LLGAC+IH + LG V ++LI L+ Q G YV L + +W +
Sbjct: 385 SLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSE 444
Query: 503 VAEVRTLMKEKAIQTTPG 520
++R M E I+ P
Sbjct: 445 AEKMRKAMIEAGIRKIPA 462
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 216/468 (46%), Gaps = 56/468 (11%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+RR F++++ +N +I Y+ + + L M G+ A+ ++ + C+
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 191 FLDIVGGVQV-----HCNV-------------------FKDGHQSDSLLL---------- 216
+ +G + +CNV K G L++
Sbjct: 298 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 357
Query: 217 ---TAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQST 273
+++ +YS+C A VF ++ WN +IS N R+ + L M +
Sbjct: 358 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 417
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER-GYGGAINLSNSLIAMYSRCGCL 332
P+ +T +L+ G+ H YI+ R Y + L NSL+ MY++ G +
Sbjct: 418 G--FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEI 475
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
A VF + V+++++I G G G+ A+ F++M R GI+PD T VLSAC
Sbjct: 476 IAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Query: 393 SHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI 452
SHS LV EG F +M FGI + HY CMVDL RAG LDKA ++ T+ +P +
Sbjct: 536 SHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAM 595
Query: 453 WRTLLGACRIHGHVTLGERVIER-LIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
TLL AC IHG+ +GE ++ L+E K + G Y+LL ++Y+ G W K+ V+TL+
Sbjct: 596 CATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLS 655
Query: 512 EKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDD---INKQ 556
+ +Q HEF + + + GE + ++D IN++
Sbjct: 656 DLGVQKA------------HEFALMETDSELDGENNKPMNDDSVINQE 691
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 189/447 (42%), Gaps = 43/447 (9%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+HAH + + L D + ++ + + L D + +I P+ +N +I +Y
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYS-AFNLLDEAQTITENSEILHPL--PWNVLIGSYI 160
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ Q+ + +Y+ M +GI A+ + +K+C LD G VH ++ H+ +
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM---- 270
+ A++ +Y + K D A ++FD M +RD V+WN +I+C + +A L D M
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 271 --------QSTSNKC---------------------EPDDVTXXXXXXXXXXXNSLEFGE 301
+ + C V +L++G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 302 RIHNYIMER-GYGGAI-NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
H ++ + I N+ NSLI MYSRC L A+ VF S+ +W+++ISG A
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
N +E +EM G P+ T +L + G + G F ++ +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
+ +VD+ ++G + A V +M K D + +L+ +G + GE + ++
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG---YGRLGKGEVALAWFKDM 516
Query: 480 -KAQEAGDYVLLLNIYSSAGHWEKVAE 505
++ D+V ++ + S+ H V E
Sbjct: 517 DRSGIKPDHVTMVAVLSACSHSNLVRE 543
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
Query: 180 SSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM 239
SS+ + +C+ F + V G Q+H + G + DS+L+ ++ YS D+A + +
Sbjct: 85 SSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENS 144
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
+ WNV+I +RN R ++++S++ M S + D+ T +
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIR--ADEFTYPSVIKACAALLDFAY 202
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
G +H I + + + N+LI+MY R G +D A +F + VSW+A+I+
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG 396
EA + + M G+ T+ + C +G
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 216/468 (46%), Gaps = 56/468 (11%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+RR F++++ +N +I Y+ + + L M G+ A+ ++ + C+
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 191 FLDIVGGVQV-----HCNV-------------------FKDGHQSDSLLL---------- 216
+ +G + +CNV K G L++
Sbjct: 298 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 357
Query: 217 ---TAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQST 273
+++ +YS+C A VF ++ WN +IS N R+ + L M +
Sbjct: 358 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 417
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER-GYGGAINLSNSLIAMYSRCGCL 332
P+ +T +L+ G+ H YI+ R Y + L NSL+ MY++ G +
Sbjct: 418 G--FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEI 475
Query: 333 DKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
A VF + V+++++I G G G+ A+ F++M R GI+PD T VLSAC
Sbjct: 476 IAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Query: 393 SHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTI 452
SHS LV EG F +M FGI + HY CMVDL RAG LDKA ++ T+ +P +
Sbjct: 536 SHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAM 595
Query: 453 WRTLLGACRIHGHVTLGERVIER-LIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
TLL AC IHG+ +GE ++ L+E K + G Y+LL ++Y+ G W K+ V+TL+
Sbjct: 596 CATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLS 655
Query: 512 EKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDD---INKQ 556
+ +Q HEF + + + GE + ++D IN++
Sbjct: 656 DLGVQKA------------HEFALMETDSELDGENNKPMNDDSVINQE 691
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 189/447 (42%), Gaps = 43/447 (9%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+HAH + + L D + ++ + + L D + +I P+ +N +I +Y
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYS-AFNLLDEAQTITENSEILHPL--PWNVLIGSYI 160
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ Q+ + +Y+ M +GI A+ + +K+C LD G VH ++ H+ +
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM---- 270
+ A++ +Y + K D A ++FD M +RD V+WN +I+C + +A L D M
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 271 --------QSTSNKC---------------------EPDDVTXXXXXXXXXXXNSLEFGE 301
+ + C V +L++G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 302 RIHNYIMER-GYGGAI-NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
H ++ + I N+ NSLI MYSRC L A+ VF S+ +W+++ISG A
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
N +E +EM G P+ T +L + G + G F ++ +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
+ +VD+ ++G + A V +M K D + +L+ +G + GE + ++
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG---YGRLGKGEVALAWFKDM 516
Query: 480 -KAQEAGDYVLLLNIYSSAGHWEKVAE 505
++ D+V ++ + S+ H V E
Sbjct: 517 DRSGIKPDHVTMVAVLSACSHSNLVRE 543
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
Query: 180 SSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM 239
SS+ + +C+ F + V G Q+H + G + DS+L+ ++ YS D+A + +
Sbjct: 85 SSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENS 144
Query: 240 PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
+ WNV+I +RN R ++++S++ M S + D+ T +
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIR--ADEFTYPSVIKACAALLDFAY 202
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
G +H I + + + N+LI+MY R G +D A +F + VSW+A+I+
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG 396
EA + + M G+ T+ + C +G
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 217/432 (50%), Gaps = 11/432 (2%)
Query: 132 RRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRF 191
R F E R IVS +N+++ + + + L ++ M + + + ++ ++ C F
Sbjct: 283 RVFDETTCRNIVS-WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFF 341
Query: 192 LDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMI 251
+ +H + + G++S+ + L++++D Y+ C DDA V D M +D V+ + MI
Sbjct: 342 EQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMI 401
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG 311
S R+ +A+S+F M+ T P+ +T L + H + R
Sbjct: 402 SGLAHAGRSDEAISIFCHMRDT-----PNAITVISLLNACSVSADLRTSKWAHGIAIRRS 456
Query: 312 YG-GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
I++ S++ Y++CG ++ A F K+++SW+ +IS A+NG +A+ F
Sbjct: 457 LAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALF 516
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
+EM++ G P+ T+ LSAC+H GLV +G+ F M+ E P++ HY C+VD+L R
Sbjct: 517 DEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSR 575
Query: 431 AGLLDKAYEVITTMA--VKPDPTIWRTLLGACRIH-GHVTLGERVIERLIELKAQEAGDY 487
AG +D A E+I + VK + W +L CR + + V+ ++EL+ + Y
Sbjct: 576 AGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGY 635
Query: 488 VLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIY 547
+L + +++ WE VA +R L+KE+ ++ G + + F+ D + E+
Sbjct: 636 LLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELN 695
Query: 548 ETLDDINKQLKI 559
+ + +++ +K+
Sbjct: 696 DVVQSLHRCMKL 707
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 144/325 (44%), Gaps = 24/325 (7%)
Query: 133 RFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFL 192
R F+ +N +N ++ ++GL+ + +R G N + + +C
Sbjct: 82 REFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLW 141
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
G ++H V + G S + +++ +Y+ A K+FDEM +RD ++W+V+I
Sbjct: 142 --FDGEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSARKLFDEMSERDVISWSVVIR 198
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
V++ L LF M + K EPD VT ++ G +H + + RG+
Sbjct: 199 SYVQSKEPVVGLKLFKEMVHEA-KTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGF 257
Query: 313 GGA-INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
A + + NSLI MYS+ +D A+ VF T +++VSW+++++G N EA+E F
Sbjct: 258 DLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFH 317
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDR---------MIGEFGITPNIHHYG 422
M + + D+ T +L C FF++ +I G N
Sbjct: 318 LMVQEAVEVDEVTVVSLLRVC----------KFFEQPLPCKSIHGVIIRRGYESNEVALS 367
Query: 423 CMVDLLGRAGLLDKAYEVITTMAVK 447
++D L+D A V+ +M K
Sbjct: 368 SLIDAYTSCSLVDDAGTVLDSMTYK 392
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 29/317 (9%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAAN-PLSSSFAVKSCIRFLDIVGGVQVHCNV 204
++ I+ S+S ++ + Y +++R G+ N P K+C + + G
Sbjct: 12 LSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG------- 64
Query: 205 FKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDAL 264
++ D Y +C + FD M RD+V+WNV++ + + L
Sbjct: 65 ------------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGL 112
Query: 265 SLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF-GERIHNYIMERGYGGAINLSNSLI 323
F ++ EP+ T SL F GE+IH Y++ G+ G ++ NS++
Sbjct: 113 WWFSKLRVWGF--EPNTST---LVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSIL 167
Query: 324 AMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM-QRIGIRPDD 382
MY+ L A ++F + V+SWS +I + ++ F+EM PD
Sbjct: 168 CMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDC 226
Query: 383 QTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVIT 442
T T VL AC+ +D G S I ++ ++D+ + +D A+ V
Sbjct: 227 VTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFD 286
Query: 443 TMAVKPDPTIWRTLLGA 459
+ + W ++L
Sbjct: 287 ETTCR-NIVSWNSILAG 302
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 61 HKRNQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVA 120
H R+ P I+ + V + +++ S+ H + I + ++D +V + A
Sbjct: 419 HMRDTPNAITVISLLNACSVSADLRT-SKWAHGIAIRRSLA----INDISVGTSIVDAYA 473
Query: 121 LSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLS 180
G ++ +RR F+QI + + +I AY+++ P K L L+ +M+++G N ++
Sbjct: 474 KCGAIE---MARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVT 530
Query: 181 SSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP 240
A+ +C + G+ + ++ ++ H+ + ++D+ S+ + D A ++ +P
Sbjct: 531 YLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLP 590
Query: 241 Q---RDTVAWNVMISCCVRN 257
+ AW ++S C RN
Sbjct: 591 EDVKAGASAWGAILSGC-RN 609
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 201/395 (50%), Gaps = 16/395 (4%)
Query: 133 RFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFL 192
+ FE++ FN + + Y+ K +Y++M+ G+ + + +++C
Sbjct: 457 KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCS 516
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP-QRDTVAWNVMI 251
D G V+ + K G S+ + A+++++++C A +FD+ ++ TV+WN+M+
Sbjct: 517 DYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG 311
+ + + + +A++ F M+ K +P+ VT ++L G +H+ +++ G
Sbjct: 577 NGYLLHGQAEEAVATFRQMKV--EKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCG 634
Query: 312 YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
+ + NSL+ MY++CG ++ + + F+ NK +VSW+ M+S A +G A+ F
Sbjct: 635 FCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFL 694
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
MQ ++PD +F VLSAC H+GLV+EG F+ M I + HY CMVDLLG+A
Sbjct: 695 SMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKA 754
Query: 432 GLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLL 491
GL +A E++ M VK +W LL + R+H ++ L + +L++L+ Y
Sbjct: 755 GLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY---- 810
Query: 492 NIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIEL 526
++ EV + + I+ P C IE+
Sbjct: 811 ------SQDRRLGEVNNVSR---IKKVPACSWIEV 836
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 226/517 (43%), Gaps = 75/517 (14%)
Query: 93 LLQIHAHIVCTTLV-HDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIR 151
LLQ+H ++ + L H+ ++ + L Q SR F+ + P V +N+MIR
Sbjct: 21 LLQVHGSLIVSGLKPHNQLINAYSL--------FQRQDLSRVIFDSVRDPGVVLWNSMIR 72
Query: 152 AYSMSDSPQKGLYLYRDM-RRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQ 210
Y+ + ++ L + M +GI + S +FA+K+C +D G+++H + + G +
Sbjct: 73 GYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLE 132
Query: 211 SDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM 270
SD + TA++++Y + R A +VFD+M +D V WN M+S +N + AL LF M
Sbjct: 133 SDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM 192
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG 330
+S + D V+ + +H ++++G+ A S+ LI MY C
Sbjct: 193 RSCC--VDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCA 248
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLS 390
L A VF K SW M++ A NG+ +E +E F+ M+ +R + L
Sbjct: 249 DLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQ 308
Query: 391 ACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDP 450
A ++ G + +G++ IH Y L+G D
Sbjct: 309 AAAYVGDLVKGIA--------------IHDYAVQQGLIG-------------------DV 335
Query: 451 TIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAG-HWEKVAEVRTL 509
++ +L+ G + + E++ I ++ ++ + ++ Y AG H E ++ R +
Sbjct: 336 SVATSLMSMYSKCGELEIAEQL---FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDM 392
Query: 510 MKEKAIQTTPGCCTIE--LKGVVHEFVVDDVSHKRKGE---IYETLDDINKQLKIAGYVV 564
M+ I P T+ L+G V+ R G+ Y DI +L+ A V+
Sbjct: 393 MR---IHIKPNAVTLTSVLQGCA------GVAASRLGKSIHCYAIKADIESELETATAVI 443
Query: 565 ELSSELHKVDDKEKGYVLSYHSEKL----AIAFGVLA 597
+ ++ + K + E+L A+AF LA
Sbjct: 444 SMYAKCGRFSPALKAF------ERLPIKDAVAFNALA 474
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 171/374 (45%), Gaps = 7/374 (1%)
Query: 127 DPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK 186
D + FE++ R S + TM+ AY+ + ++ L L+ MR + N ++++ A++
Sbjct: 249 DLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQ 308
Query: 187 SCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVA 246
+ D+V G+ +H + G D + T++M +YS+C + + A ++F + RD V+
Sbjct: 309 AAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVS 368
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
W+ MI+ + + +A+SLF M K P+ VT + G+ IH Y
Sbjct: 369 WSAMIASYEQAGQHDEAISLFRDMMRIHIK--PNAVTLTSVLQGCAGVAASRLGKSIHCY 426
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEA 366
++ + + ++I+MY++CG A + F P K V+++A+ G G +A
Sbjct: 427 AIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKA 486
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
+ ++ M+ G+ PD +T G+L C+ G + ++I + G H +++
Sbjct: 487 FDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII-KHGFDSECHVAHALIN 545
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG- 485
+ + L A + + W ++ +HG E + ++K ++
Sbjct: 546 MFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ---AEEAVATFRQMKVEKFQP 602
Query: 486 DYVLLLNIYSSAGH 499
+ V +NI +A
Sbjct: 603 NAVTFVNIVRAAAE 616
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 205/446 (45%), Gaps = 37/446 (8%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANP--LSSSFAVKSCIRFLDIVGGVQVHCN 203
+NT+I Y+ + ++ L + M G+ + + V S ++ L I G +VH
Sbjct: 228 WNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKI--GKEVHAR 285
Query: 204 VFKDGHQSDSLLLTAVMDLYSQCR-------------------------------KGDDA 232
V K+G S+ + + ++D+Y +C K +A
Sbjct: 286 VLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEA 345
Query: 233 CKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXX 292
++FD + +++ V W M + + L L + PD +
Sbjct: 346 KRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNT-PDSLVMVSVLGACS 404
Query: 293 XXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSA 352
+E G+ IH + + G L + + MYS+CG ++ A +F + + V ++A
Sbjct: 405 LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNA 464
Query: 353 MISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF 412
MI+G A +G+ ++ + FE+M G +PD+ TF +LSAC H GLV EG +F MI +
Sbjct: 465 MIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAY 524
Query: 413 GITPNIHHYGCMVDLLGRAGLLDKAYEVITTM-AVKPDPTIWRTLLGACRIHGHVTLGER 471
I+P HY CM+DL G+A LDKA E++ + V+ D I L AC + + L +
Sbjct: 525 NISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKE 584
Query: 472 VIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVH 531
V E+L+ ++ Y+ + N Y+S+G W+++ +R M+ K ++ GC + H
Sbjct: 585 VEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFH 644
Query: 532 EFVVDDVSHKRKGEIYETLDDINKQL 557
F D+SH IY L + K L
Sbjct: 645 MFTSSDISHYETEAIYAMLHFVTKDL 670
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/484 (19%), Positives = 184/484 (38%), Gaps = 112/484 (23%)
Query: 131 SRRFFEQIN--RPIVSHFNTMIRAYSMSDSPQ-KGLYLYRDMRRR---GIAANPLSSSFA 184
+R FE N R +++ +NT++ ++ +D + + + ++ +M R+ I + + +
Sbjct: 73 ARELFESDNCERDLIT-YNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTM 131
Query: 185 VKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFD------- 237
VK + ++ G Q+H + K G+ +++++ +YS+C K + C +F+
Sbjct: 132 VKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFV 191
Query: 238 --------------------------EMPQ-RDTVAWNVMISCCVRNNRTRDALSLFDVM 270
P+ DT++WN +I+ +N +AL + M
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM 251
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG 330
+ N + D+ + SL+ G+ +H +++ G +S+ ++ +Y +CG
Sbjct: 252 EE--NGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCG 309
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE------------------- 371
+ A + ++ S S+MI G + G EA F+
Sbjct: 310 NMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLN 369
Query: 372 --------EMQRIGI-----RPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNI 418
E+ R I PD VL ACS ++ G + GI +
Sbjct: 370 LRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL-RTGILMDK 428
Query: 419 HHYGCMVDLLGRAG-------LLDKAYEVITTM--------------------------- 444
VD+ + G + D ++E T M
Sbjct: 429 KLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Query: 445 AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK--AQEAGDYVLLLNIYSSAGHWEK 502
KPD + LL ACR G V GE+ + +IE + E G Y ++++Y A +K
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDK 548
Query: 503 VAEV 506
E+
Sbjct: 549 AIEL 552
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 68/261 (26%)
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRT 260
H K G ++ +++LYS+ +A VFDEM +R+ +WN +I+ V+ N
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 261 RDALSLF-------DVMQ--------STSNKCEP-------------------DDVTXXX 286
++A LF D++ + ++ CE DD T
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 287 XXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG-----C---------- 331
++ +GE++H +++ G G +SLI MYS+CG C
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 332 ------------------LDKAYEVFMGTPN-KSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+DKA VF P +SW+ +I+G A NGY +EA++
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 373 MQRIGIRPDDQTFTGVLSACS 393
M+ G++ D+ +F VL+ S
Sbjct: 251 MEENGLKWDEHSFGAVLNVLS 271
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 201/406 (49%), Gaps = 5/406 (1%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
F +R +VS +N +I + S S + + L + MR I + + S V C +
Sbjct: 192 FLTMEDRDVVS-WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRE 250
Query: 194 IVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISC 253
+ G Q K G S+S++L A +D++S+C + DD+ K+F E+ + D+V N MI
Sbjct: 251 LSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGS 310
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+ DAL LF + + S + PD T L+ G +H+ +++ G+
Sbjct: 311 YSWHCCGEDALRLFILAMTQSVR--PDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFD 367
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
++ SL+ MY + G +D A VF T K ++ W+ +I GLA N E++ F ++
Sbjct: 368 LDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL 427
Query: 374 -QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
++PD T G+L AC ++G V+EG+ F M G+ P HY C+++LL R G
Sbjct: 428 LMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVG 487
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLN 492
++++A ++ + +P IW +L A G L E V + ++E + + + Y++L+
Sbjct: 488 MINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIK 547
Query: 493 IYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDV 538
IY WE ++R M E +++ G I ++ V F D +
Sbjct: 548 IYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQL 593
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 147/331 (44%), Gaps = 26/331 (7%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P +F+ ++ +S SP L + + + + A + +++ C++ G V
Sbjct: 2 PSSLYFSRLVNRSLLSKSPT----LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVIN 57
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKG-------DDACKVFDEMPQRDTVAWNVMISC 253
+F D +++ ++ C KG ++A +FDEMP+RD V+WN MIS
Sbjct: 58 ALQLFDDIPDKNTIT-------WNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISG 110
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
V + +F MQ + P + T + GE+IH + G
Sbjct: 111 LVSCGFHEYGIRVFFDMQRW--EIRPTEFTFSILASLV---TCVRHGEQIHGNAICSGVS 165
Query: 314 G-AINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
+ + NS++ MY R G D A VF+ ++ VVSW+ +I + +G + A++ F
Sbjct: 166 RYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWL 225
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M+ + I+PD+ T + V+S CS + +G I + G N G +D+ +
Sbjct: 226 MREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCI-KMGFLSNSIVLGAGIDMFSKCN 284
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLLGACRIH 463
LD + ++ + K D + +++G+ H
Sbjct: 285 RLDDSVKLFRELE-KWDSVLCNSMIGSYSWH 314
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 204/417 (48%), Gaps = 29/417 (6%)
Query: 244 TVAWNVMI----SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEF 299
+VA NV I S C++ N R+A+ + D +++ D + +LE
Sbjct: 81 SVAQNVTIETFDSLCIQGN-WREAVEVLDYLENKGYAM--DLIRLLGLAKLCGKPEALEA 137
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAV 359
+H I+ + N++I MYS C +D A +VF P + + M+
Sbjct: 138 ARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVN 197
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
NGYG+EAI+ F + G +P+ + F V S C+ +G V EG F M E+GI P++
Sbjct: 198 NGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSME 257
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
HY + +L +G LD+A + M ++P +W TL+ R+HG V LG+R E + +L
Sbjct: 258 HYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKL 317
Query: 480 KAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVS 539
A L+ SSAG A + KE + ++ P F D S
Sbjct: 318 DATR-------LDKVSSAGLVATKAS-DFVKKEPSTRSEP--------YFYSTFRPVDSS 361
Query: 540 HKRKGEIYETLDDINKQLKIAGYVVE---LSSELHKVDDKEKGYVLSYHSEKLAIAFGVL 596
H + IYETL + QLK GYV + S + +++KE+ + Y E++A+ +L
Sbjct: 362 HPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQ--IFGYR-EEIAVVESLL 418
Query: 597 ATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
+ P + + + TN+R+ DCH+ +KL S + RD+I RD K +H F+ G C C++ W
Sbjct: 419 KSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 12/189 (6%)
Query: 218 AVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKC 277
A++++YS C DDA KVF+EMP+ ++ VM+ C V N +A+ LF + NK
Sbjct: 159 AIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKP 218
Query: 278 EPD---DVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLS--NSLIAMYSRCGCL 332
+ V SL+F M R YG ++ +S+ M + G L
Sbjct: 219 NGEIFNQVFSTCTLTGDVKEGSLQF------QAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 333 DKAYEVFMGTPNK-SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
D+A P + SV W +++ V+G + E ++++ D+ + L A
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVSSAGLVA 332
Query: 392 CSHSGLVDE 400
S V +
Sbjct: 333 TKASDFVKK 341
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 208/444 (46%), Gaps = 44/444 (9%)
Query: 117 SRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA 176
S V++ + + + R FE++ V +N I M + + ++ R+ +
Sbjct: 169 SLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL-MENGVMNLVPSVFNLMRKFSSE 227
Query: 177 NPLSSSF--AVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACK 234
P +F A+ +C L++ G Q+H V K Q ++++ TA++D+YS+CR A
Sbjct: 228 EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYI 287
Query: 235 VFDEMPQ-RDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXX 293
VF E+ R+ ++WN +IS + N + A+ LF+ + S K PD T
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLK--PDSATWNSLISGFSQ 345
Query: 294 XN-----------------------------------SLEFGERIHNYIMERGYGGAINL 318
+L+ G+ IH ++++ I +
Sbjct: 346 LGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFV 405
Query: 319 SNSLIAMYSRCGCLDKAYEVF--MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
SLI MY +CG A +F K V W+ MISG +G + AIE FE ++
Sbjct: 406 LTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREE 465
Query: 377 GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDK 436
+ P TFT VLSACSH G V++G F M E+G P+ H GCM+DLLGR+G L +
Sbjct: 466 KVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLRE 525
Query: 437 AYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSS 496
A EVI M+ +LLG+CR H LGE +L EL+ + +V+L +IY++
Sbjct: 526 AKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAA 584
Query: 497 AGHWEKVAEVRTLMKEKAIQTTPG 520
WE V +R ++ +K + PG
Sbjct: 585 LERWEDVESIRQVIDQKQLVKLPG 608
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 226/505 (44%), Gaps = 59/505 (11%)
Query: 49 VEPAINLAPIPHHKRNQPTPISSFPPSHKEQVISTIKSVSQKPHLLQ---IHAHIVCTTL 105
V +L I H N+ T FPP +KS ++ ++Q +HA +V T
Sbjct: 15 VTGGTSLDVILSHSPNKFT----FPP--------LLKSCAKLGDVVQGRILHAQVVKTGF 62
Query: 106 VHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYL 165
D + +S + D + + +++ ++ N + + + +
Sbjct: 63 FVDVFTATALVSMYMKVKQVTDAL---KVLDEMPERGIASVNAAVSGLLENGFCRDAFRM 119
Query: 166 YRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQ 225
+ D R G N ++ + + C DI GG+Q+HC K G + + + T+++ +YS+
Sbjct: 120 FGDARVSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSR 176
Query: 226 CRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXX 285
C + A ++F+++P + V +N IS + N S+F++M+ S++ EP+DVT
Sbjct: 177 CGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSE-EPNDVTFV 235
Query: 286 XXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPN- 344
+L++G ++H +M++ + + +LI MYS+C C AY VF +
Sbjct: 236 NAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDT 295
Query: 345 KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSF 404
++++SW+++ISG+ +NG + A+E FE++ G++PD T+ ++S S G V E F
Sbjct: 296 RNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKF 355
Query: 405 FDRMIG----------------------------------EFGITPNIHHYGCMVDLLGR 430
F+RM+ + +I ++D+ +
Sbjct: 356 FERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMK 415
Query: 431 AGLLDKAYEVITTMAVKP-DPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEA-GDYV 488
GL A + KP DP W ++ HG + E L E K + + +
Sbjct: 416 CGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFT 475
Query: 489 LLLNIYSSAGHWEKVAEVRTLMKEK 513
+L+ S G+ EK +++ LM+E+
Sbjct: 476 AVLSACSHCGNVEKGSQIFRLMQEE 500
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 209/453 (46%), Gaps = 61/453 (13%)
Query: 46 HHPVEPAINLAPIPHH--KRNQPTPISSFPPSHKEQVISTIKSVSQKPHLLQIHAHIV-- 101
+P++ +P H NQ T +S S Q++S + QIH ++
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR---------QIHGMLIKN 345
Query: 102 -CTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQ 160
C T + + F ++ G L+D SR F+ I + +N ++ Y+ D P
Sbjct: 346 GCETGIVLGNALIDFYAKC---GNLED---SRLCFDYIRDKNIVCWNALLSGYANKDGP- 398
Query: 161 KGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVM 220
L L+ M + G + S A+KSC + Q+H + + G++ + +L+++M
Sbjct: 399 ICLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLM 454
Query: 221 DLYSQCRKGDDA--------------------------------CKVFDEMPQRDTVAWN 248
Y++ + +DA K+ + Q DTV+WN
Sbjct: 455 RSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWN 514
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+ I+ C R++ + + LF M ++ + PD T L G IH I
Sbjct: 515 IAIAACSRSDYHEEVIELFKHMLQSNIR--PDKYTFVSILSLCSKLCDLTLGSSIHGLIT 572
Query: 309 ERGYGGAIN-LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
+ + A + N LI MY +CG + +VF T K++++W+A+IS L ++GYG+EA+
Sbjct: 573 KTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEAL 632
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDL 427
E F+E +G +PD +F +L+AC H G+V EGM F +M ++G+ P + HY C VDL
Sbjct: 633 EKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDL 691
Query: 428 LGRAGLLDKAYEVITTMAVKPDPTIWRTLLGAC 460
L R G L +A +I M D +WRT L C
Sbjct: 692 LARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 161/370 (43%), Gaps = 16/370 (4%)
Query: 75 SHKEQVISTIKSVSQKPHLLQIHAH-----IVCTTLVHDPAVSLHFLSRVALSGPLQDPI 129
+H ++V+S + + P + A +C+ L+ V + +S L L +
Sbjct: 10 NHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIIS---LYEKLGEVS 66
Query: 130 YSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
+ + F+Q+ FNT+I+ YS K ++ +MR G N S+ + SC
Sbjct: 67 LAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQ-STVSGLLSCA 125
Query: 190 RFLDIVGGVQVHCNVFKDG-HQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWN 248
LD+ G Q+H K G +D+ + T ++ LY + + A +VF++MP + WN
Sbjct: 126 S-LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWN 184
Query: 249 VMISCCVRNNRTRDALSLF-DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
M+S ++ + F ++++ ++ E + L+ +++H
Sbjct: 185 HMMSLLGHRGFLKECMFFFRELVRMGASLTES---SFLGVLKGVSCVKDLDISKQLHCSA 241
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAI 367
++G I++ NSLI+ Y +CG A +F + +VSW+A+I A + +A+
Sbjct: 242 TKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKAL 301
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDL 427
+ F M G P+ T+ VL S L+ G +I G I ++D
Sbjct: 302 KLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDF 360
Query: 428 LGRAGLLDKA 437
+ G L+ +
Sbjct: 361 YAKCGNLEDS 370
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 199/394 (50%), Gaps = 15/394 (3%)
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRG-IAANPLSSSFAVKSCIRFL 192
F E+ + +VS +N+MI+AY L+ M+ R I+ N + + S R
Sbjct: 273 FRERFCKNVVS-WNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVS--RME 329
Query: 193 DIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMIS 252
D +F + D+ ++ Y+ + A F++ P++ TV+WN +I+
Sbjct: 330 DAFA-------LFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIA 382
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
+N ++A+ LF M K +P +T +L G ++H I+ +
Sbjct: 383 AYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLV--NLRLGMQMHQ-IVVKTV 439
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTP-NKSVVSWSAMISGLAVNGYGKEAIEAFE 371
+ + N+LI MYSRCG + ++ +F + V++W+AMI G A +G EA+ F
Sbjct: 440 IPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFG 499
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
M+ GI P TF VL+AC+H+GLVDE + F M+ + I P + HY +V++
Sbjct: 500 SMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQ 559
Query: 432 GLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLL 491
G ++A +IT+M +PD T+W LL ACRI+ +V L E + L+ + + YVLL
Sbjct: 560 GQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLY 619
Query: 492 NIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE 525
N+Y+ G W++ ++VR M+ K I+ G ++
Sbjct: 620 NMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 12/239 (5%)
Query: 229 GDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXX 288
GDD F E ++ V+WN MI ++ A LFD M+ + D ++
Sbjct: 266 GDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK------DRDTISWNTMI 319
Query: 289 XXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVV 348
+ +E + + + R + N +++ Y+ G ++ A F TP K V
Sbjct: 320 DGYVHVSRMEDAFALFSEMPNRD----AHSWNMMVSGYASVGNVELARHYFEKTPEKHTV 375
Query: 349 SWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM 408
SW+++I+ N KEA++ F M G +PD T T +LSA +GLV+ +
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAS--TGLVNLRLGMQMHQ 433
Query: 409 IGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVT 467
I + P++ + ++ + R G + ++ + M +K + W ++G HG+ +
Sbjct: 434 IVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNAS 492
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 231 DACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX 290
+A +F+++ R+TV WN MIS V+ A LFDVM + D VT
Sbjct: 58 EARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP------KRDVVTWNTMISG 111
Query: 291 XXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSW 350
+ F E E + + N++I+ Y++ + +A +F P ++ VSW
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFSW-NTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 351 SAMISGLAVNGYGKEAIEAFEEM 373
SAMI+G NG A+ F +M
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKM 193
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 128/327 (39%), Gaps = 43/327 (13%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA-NPLSSSFAVKSCI 189
+R FE++ +NTMI Y + L+ M +R + N + S + I
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGI 118
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
RFL+ +F + DS ++ Y++ R+ +A +F++MP+R+ V+W+
Sbjct: 119 RFLEEAR------KLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSA 172
Query: 250 MISCCVRNNRTRDALSLFDVM--QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
MI+ +N A+ LF M + +S C ++G +
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVS--- 229
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPN---------------KSVVSWSA 352
G + N+LI Y + G ++ A +F P+ K+VVSW++
Sbjct: 230 ---GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 353 MISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF 412
MI G A F++M+ D ++ ++ H +++ + F M
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEM---- 338
Query: 413 GITPN--IHHYGCMVDLLGRAGLLDKA 437
PN H + MV G ++ A
Sbjct: 339 ---PNRDAHSWNMMVSGYASVGNVELA 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+R +FE+ +N++I AY + ++ + L+ M G +P + + + +
Sbjct: 362 ARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTG 421
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP-QRDTVAWNV 249
+++ G+Q+H V K D + A++ +YS+C + ++ ++FDEM +R+ + WN
Sbjct: 422 LVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNA 480
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVT 283
MI + +AL+LF M+ SN P +T
Sbjct: 481 MIGGYAFHGNASEALNLFGSMK--SNGIYPSHIT 512
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 209/434 (48%), Gaps = 8/434 (1%)
Query: 96 IHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSM 155
IHA I+ + + D + L G +++ Y F +I+ P + +N++I S
Sbjct: 322 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFY---VFGRIHNPNLVSWNSIISGCSE 378
Query: 156 SDSPQKGLYLYRDMRRRGIA-ANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
+ ++ + +YR + R + + S A+ + V G +H V K G++
Sbjct: 379 NGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVF 438
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ T ++ +Y + R+ + A KVFD M +RD V W MI R + A+ F M
Sbjct: 439 VGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREK 498
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
N+ D + L GE H + G+ +++ +L+ MY + G +
Sbjct: 499 NR--SDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYET 556
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
A +F N + W++M+ + +G ++A+ FE++ G PD T+ +L+ACSH
Sbjct: 557 AETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSH 616
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT-IW 453
G +G +++M E GI HY CMV+L+ +AGL+D+A E+I + +W
Sbjct: 617 RGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELW 675
Query: 454 RTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEK 513
RTLL AC ++ +G E++++L ++ ++LL N+Y+ G WE VAE+R ++
Sbjct: 676 RTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGL 735
Query: 514 AIQTTPGCCTIELK 527
A PG IE+
Sbjct: 736 ASSKDPGLSWIEVN 749
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 172/388 (44%), Gaps = 4/388 (1%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+RR F+ +N +NTMI +D + GL +R+M G+ + S + C +
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
G +H + +D L A++D+Y C +A VF + + V+WN +
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
IS C N A+ ++ + S PD+ T G+ +H + +
Sbjct: 373 ISGCSENGFGEQAMLMYRRLLRMSTP-RPDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
GY ++ + +L++MY + + A +VF + VV W+ MI G + G + A++ F
Sbjct: 432 GYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFF 491
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
EM R R D + + V+ ACS ++ +G F I G + G +VD+ G+
Sbjct: 492 IEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAI-RTGFDCVMSVCGALVDMYGK 550
Query: 431 AGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ-EAGDYVL 489
G + A E I ++A PD W ++LGA HG V E+++E +A Y+
Sbjct: 551 NGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLS 609
Query: 490 LLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
LL S G + + MKE+ I+
Sbjct: 610 LLAACSHRGSTLQGKFLWNQMKEQGIKA 637
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 178/392 (45%), Gaps = 19/392 (4%)
Query: 95 QIHAHIVCT---TLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIR 151
QIHA ++ P + + +S G L+ +R+ F+++ V +N +
Sbjct: 115 QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQ---ARKVFDKMPHRNVVSYNALYS 171
Query: 152 AYSMS-DSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQ 210
AYS + D L M + N + + V+ C D++ G ++ + K G+
Sbjct: 172 AYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYS 231
Query: 211 SDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVM 270
+ ++ T+V+ +YS C + A ++FD + RD VAWN MI ++N++ D L F M
Sbjct: 232 DNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNM 291
Query: 271 QSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCG 330
+ +P T S G+ IH I+ + L N+L+ MY CG
Sbjct: 292 LMSG--VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 331 CLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGI-RPDDQTFTGVL 389
+ +A+ VF N ++VSW+++ISG + NG+G++A+ + + R+ RPD+ TF+ +
Sbjct: 350 DMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Query: 390 SACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPD 449
SA + G + + G ++ ++ + + + A +V M + D
Sbjct: 410 SATAEPERFVHG-KLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER-D 467
Query: 450 PTIWRTLLGACRIHGHVTLG--ERVIERLIEL 479
+W + I GH LG E ++ IE+
Sbjct: 468 VVLWTEM-----IVGHSRLGNSELAVQFFIEM 494
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 169/407 (41%), Gaps = 27/407 (6%)
Query: 200 VHCNVFKDGHQSDSLLLTA--------------VMDLYSQCRKGDDACKVFDEMPQRDTV 245
V V K Q +L+LTA ++ +Y +C + A KVFD+MP R+ V
Sbjct: 105 VSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVV 164
Query: 246 AWNVMISCCVRN-NRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
++N + S RN + A L M +P+ T + G ++
Sbjct: 165 SYNALYSAYSRNPDFASYAFPLTTHM--AFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLN 222
Query: 305 NYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGK 364
+ I++ GY + + S++ MYS CG L+ A +F N+ V+W+ MI G N +
Sbjct: 223 SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 365 EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCM 424
+ + F M G+ P T++ VL+ CS G G R+I + ++ +
Sbjct: 283 DGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA-DLPLDNAL 341
Query: 425 VDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEA 484
+D+ G + +A+ V + P+ W +++ C +G + RL+ +
Sbjct: 342 LDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 485 GDYVLLLNIYSSAGHWEKV------AEVRTLMKEKAIQTTPGCCTIELKGVVHEFV--VD 536
+Y I ++A V +V L E+++ ++ K E V
Sbjct: 401 DEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
Query: 537 DVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLS 583
DV +R ++ + + +L + V+ E+++ ++ G+ LS
Sbjct: 461 DVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLS 507
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 194/391 (49%), Gaps = 11/391 (2%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
S R F + V +N+++ + S L L+ M+ G + + C R
Sbjct: 268 SMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSR 327
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSL-LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNV 249
DI G Q+HC V K G SL + +A++D+Y +C +++ ++ +P + N
Sbjct: 328 NSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNS 387
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME 309
+++ + T+D + +F +M + ++ SL +H ++
Sbjct: 388 LMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIK 447
Query: 310 RGYGGAINLSNSLIAMYSRCGCLDKAYEVF--MGTPNKSVVSWSAMISGLAVNGYGKEAI 367
GY + +S SLI Y++ G + + +VF + TPN + +++I+G A NG G + +
Sbjct: 448 SGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPN--IFCLTSIINGYARNGMGTDCV 505
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDL 427
+ EM R+ + PD+ T VLS CSHSGLV+EG FD + ++GI+P Y CMVDL
Sbjct: 506 KMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDL 565
Query: 428 LGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDY 487
LGRAGL++KA ++ D W +LL +CRIH + T+G R E L+ L+ + Y
Sbjct: 566 LGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVY 625
Query: 488 VLLLNIYSSAGHWE------KVAEVRTLMKE 512
+ + Y G +E ++A R LM+E
Sbjct: 626 IQVSKFYFEIGDFEISRQIREIAASRELMRE 656
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 138/298 (46%), Gaps = 5/298 (1%)
Query: 135 FEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDI 194
F++++ V +N +I S + + LY +M G+ + + + C L
Sbjct: 69 FDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFC 128
Query: 195 VGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCC 254
G+QVHC V G + + +A++ LY+ R D A K+FDEM R+ N+++ C
Sbjct: 129 REGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCF 188
Query: 255 VRNNRTRDALSLFDV-MQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+ ++ LF+V ++ + +T + G+++H+ +++ G+
Sbjct: 189 CQTGESK---RLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWN 245
Query: 314 -GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
I ++N L+ YS CG L + F P K V+SW++++S A G ++++ F +
Sbjct: 246 ISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSK 305
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
MQ G RP + F L+ CS + + G ++ ++H ++D+ G+
Sbjct: 306 MQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGK 363
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 7/235 (2%)
Query: 234 KVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXX 293
+ FDEM RD V +N++IS R + A+ L+ M S C +
Sbjct: 67 EAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS----CGLRESASTFPSVLSVC 122
Query: 294 XNSL--EFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWS 351
+ L G ++H ++ G+G + + ++L+ +Y+ +D A ++F ++++ +
Sbjct: 123 SDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCN 182
Query: 352 AMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGE 411
++ G K E + M+ G+ + T+ ++ CSH LV EG ++
Sbjct: 183 LLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKS 242
Query: 412 FGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHV 466
NI +VD G L + + K D W +++ C +G V
Sbjct: 243 GWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEK-DVISWNSIVSVCADYGSV 296
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 330 GCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVL 389
G L A+E F + VV+++ +ISG + G AIE + EM G+R TF VL
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 390 SACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM 444
S CS EG+ R+I G N+ +V L L+D A ++ M
Sbjct: 120 SVCSDELFCREGIQVHCRVI-SLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 223/472 (47%), Gaps = 24/472 (5%)
Query: 66 PTPISSFPPSHKE----------QVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHF 115
P + F H+E V+ + K + +QIH + + V
Sbjct: 95 PDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSAL 154
Query: 116 LSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIA 175
LS A G +++ +R F+ + + +N MI Y+ + L++ M G
Sbjct: 155 LSLYARCGKMEE---ARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211
Query: 176 ANPLSSSFAVKSCI--RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDAC 233
+ + +++ I + L+IV ++H K G S L+ ++++ Y +C +A
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVS--ELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAW 269
Query: 234 KVFDEMPQRDTVAWNVMIS-CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXX 292
K+ + +RD ++ +I+ +NN T DA +F M K + D+V
Sbjct: 270 KLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM--IRMKTKMDEVVVSSMLKICT 327
Query: 293 XXNSLEFGERIHNYIMERG-YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWS 351
S+ G +IH + ++ + L NSLI MY++ G ++ A F K V SW+
Sbjct: 328 TIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWT 387
Query: 352 AMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGE 411
++I+G +G ++AI+ + M+ I+P+D TF +LSACSH+G + G +D MI +
Sbjct: 388 SLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINK 447
Query: 412 FGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMA--VKPDPTIWRTLLGACRIHGHVTLG 469
GI H C++D+L R+G L++AY +I + V + W L ACR HG+V L
Sbjct: 448 HGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLS 507
Query: 470 ERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEK-AIQTTPG 520
+ +L+ ++ ++ +Y+ L ++Y++ G W+ R LMKE + PG
Sbjct: 508 KVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPG 559
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 203/453 (44%), Gaps = 49/453 (10%)
Query: 105 LVHDPAVSLHFLSRVALSGPL-------QDPIYSRRFFEQINRPIVSHFNTMIRAYSMSD 157
L+H +++ F S + L L D ++R+ F++I++ V + MI +S
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 158 SPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLT 217
L L+++M R + AN + +KSC + G+Q+H +V K + ++ +
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 218 AVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKC 277
A++ LY++C K ++A FD M +RD V+WN MI N + SLF +M + K
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK- 211
Query: 278 EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYE 337
PD T LE +H ++ G+G + L SL+ Y +CG L A++
Sbjct: 212 -PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWK 270
Query: 338 VFMGTPNKSVVSWSAMISGLA-VNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG 396
+ GT + ++S +A+I+G + N +A + F++M R+ + D+ + +L C+
Sbjct: 271 LHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIA 330
Query: 397 LVDEGMSF-----------FDRMIGEFGI--------------------TPNIHHYGCMV 425
V G FD +G I ++ + ++
Sbjct: 331 SVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLI 390
Query: 426 DLLGRAGLLDKAYEVITTMA---VKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ 482
GR G +KA ++ M +KP+ + +LL AC G LG ++ + +I
Sbjct: 391 AGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 450
Query: 483 EAGDYVL--LLNIYSSAGHWEKVAEVRTLMKEK 513
EA + L ++++ + +G+ E E L++ K
Sbjct: 451 EAREEHLSCIIDMLARSGYLE---EAYALIRSK 480
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 166/335 (49%), Gaps = 15/335 (4%)
Query: 321 SLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRP 380
++I MYS C D A VF P ++ +W MI LA NG G+ AI+ F G +P
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 381 DDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEV 440
D + F V AC G ++EG+ F+ M ++G+ ++ Y ++++L G LD+A +
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 441 ITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDY--VLLLNIYSSAG 498
+ M V+P +W TL+ C + G++ LG+R E + +L A L+ +S
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDS 327
Query: 499 HWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLK 558
EK+ E+R + I+ P K +HEF D SH + +L Q+
Sbjct: 328 AMEKLKELRYC---QMIRDDP-------KKRMHEFRAGDTSHLGTVSAFRSL---KVQML 374
Query: 559 IAGYVVELSSELHKVDDKEKGYVLSYHSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHN 618
G+V V+++EK L + S KLA A ++ + L V N+R C+D HN
Sbjct: 375 DIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHN 434
Query: 619 FLKLFSGVYNRDVILRDHKRFHHFRGGQCSCSDYW 653
K+ S + R +I RD K++H ++ G CSC DYW
Sbjct: 435 TFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 219 VMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
V+++YS CR DDA VF+EMP+R++ W MI C +N A+ +F NK
Sbjct: 149 VIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNK-- 206
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSN--SLIAMYSRCGCLDKAY 336
PD + G +H M R YG +++ + ++I M + CG LD+A
Sbjct: 207 PDKEIFKAVFFACVSIGDINEG-LLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEAL 265
Query: 337 E-VFMGTPNKSVVSWSAMISGLAVNGY 362
+ V T SV W +++ V GY
Sbjct: 266 DFVERMTVEPSVEMWETLMNLCWVQGY 292
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 177/363 (48%), Gaps = 7/363 (1%)
Query: 116 LSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIA 175
+S A+SG ++ +R F+ + + +N M+ Y + + L MR+
Sbjct: 336 MSGYAMSGLTRE---ARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392
Query: 176 ANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKV 235
+ ++ + + C D+ G Q H +++ G+ ++ ++ A++D+Y +C A
Sbjct: 393 IDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIW 452
Query: 236 FDEMPQ-RDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXX 294
F +M + RD V+WN +++ R R+ ALS F+ MQ + +P T
Sbjct: 453 FRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA---KPSKYTLATLLAGCANI 509
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMI 354
+L G+ IH +++ GY + + +++ MYS+C C D A EVF + ++ W+++I
Sbjct: 510 PALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSII 569
Query: 355 SGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGI 414
G NG KE E F ++ G++PD TF G+L AC G V+ G +F M ++ I
Sbjct: 570 RGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHI 629
Query: 415 TPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIE 474
+P + HY CM++L + G L + E + M P + + AC+ + LG +
Sbjct: 630 SPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAK 689
Query: 475 RLI 477
RL+
Sbjct: 690 RLM 692
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 156/367 (42%), Gaps = 41/367 (11%)
Query: 131 SRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
+R FE++ +N +I A + + + ++R M R G+ A S + +KSC
Sbjct: 115 ARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGL 174
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVM 250
LD+ Q+HC V K G+ + L T+++D+Y +CR DA +VFDE+ V+WNV+
Sbjct: 175 ILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVI 234
Query: 251 ISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
+ + +A+ +F M + + P + T +LE G+ IH ++
Sbjct: 235 VRRYLEMGFNDEAVVMFFKMLELNVR--PLNHTVSSVMLACSRSLALEVGKVIHAIAVKL 292
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
+S S+ MY +C L+ A VF T +K + SW++ +SG A++G +EA E F
Sbjct: 293 SVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELF 352
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF------------------ 412
+ M I ++ +L H+ DE + F M E
Sbjct: 353 DLMPERNI----VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 413 ----------------GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTL 456
G N+ ++D+ G+ G L A M+ D W L
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 457 L-GACRI 462
L G R+
Sbjct: 469 LTGVARV 475
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 132/300 (44%), Gaps = 7/300 (2%)
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQST 273
LL ++ Y +C DDA ++F+EMP+RD +WN +I+ C +N + + +F M
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM--N 154
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
+ + + L ++H +++ GY G ++L S++ +Y +C +
Sbjct: 155 RDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMS 214
Query: 334 KAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
A VF N S VSW+ ++ G+ EA+ F +M + +RP + T + V+ ACS
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 394 HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIW 453
S ++ G + + + + + D+ + L+ A V K D W
Sbjct: 275 RSLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK-DLKSW 332
Query: 454 RTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEK 513
+ + + G + + + E + + +L Y A W++ + TLM+++
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMPE---RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
I L N I Y +CGC+D A E+F P + SW+A+I+ A NG E F M R
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM---IGEFGITPNIHHYGCMVDLLGRAG 432
G+R + +F GVL +C GL+ + + ++ + ++G + N+ +VD+ G+
Sbjct: 156 DGVRATETSFAGVLKSC---GLILD-LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLL 457
++ A V + V P W ++
Sbjct: 212 VMSDARRVFDEI-VNPSDVSWNVIV 235
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 164/344 (47%), Gaps = 6/344 (1%)
Query: 95 QIHAHIV-CTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAY 153
++HAH++ V P V + G D RR F + + ++ Y
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCKCG---DMASGRRVFYGSKQRNAISWTALMSGY 393
Query: 154 SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDS 213
+ + + L M++ G + ++ + + C I G ++HC K+ +
Sbjct: 394 AANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNV 453
Query: 214 LLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQST 273
L+T++M +YS+C + ++FD + QR+ AW MI C V N R + +F +M +
Sbjct: 454 SLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLS 513
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
++ PD VT +L+ G+ +H +I+++ + +S +I MY +CG L
Sbjct: 514 KHR--PDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 334 KAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
A F K ++W+A+I N ++AI FE+M G P+ TFT VLS CS
Sbjct: 572 SANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICS 631
Query: 394 HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA 437
+G VDE FF+ M+ + + P+ HY +++LL R G +++A
Sbjct: 632 QAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 7/313 (2%)
Query: 92 HLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIR 151
H Q+H HI L + + + G ++D +++ F++ V +N ++R
Sbjct: 129 HGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKD---AQKVFDESTSSNVYSWNALLR 185
Query: 152 AYSMSDSP--QKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGH 209
+S Q L + +MR G+ N S S KS + G++ H K+G
Sbjct: 186 GTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGL 245
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDV 269
+ L T+++D+Y +C K A +VFDE+ +RD V W MI+ N R +AL LF
Sbjct: 246 FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRT 305
Query: 270 MQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME-RGYGGAINLSNSLIAMYSR 328
M S K P+ V +L+ G+ +H ++++ + Y + + LI +Y +
Sbjct: 306 MIS-EEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCK 364
Query: 329 CGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGV 388
CG + VF G+ ++ +SW+A++SG A NG +A+ + MQ+ G RPD T V
Sbjct: 365 CGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATV 424
Query: 389 LSACSHSGLVDEG 401
L C+ + +G
Sbjct: 425 LPVCAELRAIKQG 437
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 5/243 (2%)
Query: 150 IRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGH 209
I+ ++ ++ + L + + +RGI N + S +++C+R ++ G QVH ++ +G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTR--DALSLF 267
+S+ L T ++ +Y+ C DA KVFDE + +WN ++ V + + R D LS F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 268 DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYS 327
M+ + + + ++L G + H ++ G ++ L SL+ MY
Sbjct: 203 TEMRELG--VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 328 RCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM-QRIGIRPDDQTFT 386
+CG + A VF + +V W AMI+GLA N EA+ F M I P+ T
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 387 GVL 389
+L
Sbjct: 321 TIL 323
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 200/413 (48%), Gaps = 15/413 (3%)
Query: 117 SRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAA 176
+R+ LS PL I+S+ + + V N +I Y + +++ M +
Sbjct: 167 ARLHLS-PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEK---- 221
Query: 177 NPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVF 236
+ +S + V SC R G +++ F D++ ++D + + ++A +V
Sbjct: 222 DTVSWNAIVASCSR----NGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVL 277
Query: 237 DEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNS 296
+MP ++ +WN +++ V + ++ +A F M S+ + D+ +
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRF--DEYSLSIVLAAVAALAV 335
Query: 297 LEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISG 356
+ +G IH + G + ++++LI MYS+CG L A +F P K+++ W+ MISG
Sbjct: 336 VPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISG 395
Query: 357 LAVNGYGKEAIEAFEEM-QRIGIRPDDQTFTGVLSACSHSGLVDEGM-SFFDRMIGEFGI 414
A NG EAI+ F ++ Q ++PD TF +L+ CSH + E M +F+ MI E+ I
Sbjct: 396 YARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRI 455
Query: 415 TPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIE 474
P++ H ++ +G+ G + +A +VI D WR LLGAC + + V
Sbjct: 456 KPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAA 515
Query: 475 RLIELKAQEAGD--YVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIE 525
++IEL + + Y+++ N+Y+ W +V ++R +M+E + G I+
Sbjct: 516 KMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 211/513 (41%), Gaps = 81/513 (15%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+H ++ V + +S + S L+D + + F+++ P V +N+++ Y
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLED---AHKVFDEMPDPDVISWNSLVSGYV 132
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
S Q+G+ L+ ++ R + N S + A+ +C R G +H + K G + ++
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 215 LL-TAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQST 273
++ ++D+Y +C DDA VF M ++DTV+WN +++ C RN + L F M +
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN- 251
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
PD VT N LI + + G +
Sbjct: 252 -----PDTVTY-----------------------------------NELIDAFVKSGDFN 271
Query: 334 KAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACS 393
A++V PN + SW+ +++G + EA E F +M G+R D+ + + VL+A +
Sbjct: 272 NAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVA 331
Query: 394 HSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIW 453
+V G S + G+ + ++D+ + G+L A + TM K + +W
Sbjct: 332 ALAVVPWG-SLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRK-NLIVW 389
Query: 454 RTLLGACRIHGHVTLGERV--IERLIELKAQE--AGDYVLLLNIYSSAGHWEKVAEV--- 506
+ I G+ G+ + I+ +LK + D LN+ + H E EV
Sbjct: 390 NEM-----ISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLG 444
Query: 507 --RTLMKEKAIQ-TTPGCCTI-----------ELKGVVHEFVVDDVSHKRKGEIYETLD- 551
++ E I+ + CC++ + K V+ EF G + L
Sbjct: 445 YFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEF-----GFGYDGVAWRALLG 499
Query: 552 --DINKQLKIAGYVVELSSELHKVDDKEKGYVL 582
K LK A V EL D E Y++
Sbjct: 500 ACSARKDLKAAKTVAAKMIELGDADKDEYLYIV 532
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 89/129 (68%), Gaps = 6/129 (4%)
Query: 525 ELKGVVHEFVVDDVSHKRKGEIYETLDDINKQLKIAGYVVELSSELHKVDDKEKGYVLSY 584
E+ G + +VD + + Y L + K+++ AGYV E LH +D++ K L +
Sbjct: 117 EISGGEKKAIVD------RSKAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMH 170
Query: 585 HSEKLAIAFGVLATPPGTTLRVATNVRVCVDCHNFLKLFSGVYNRDVILRDHKRFHHFRG 644
HSE+LAIAFG++ TPPGTT+RV N+R+C DCHNF+K+ S + +R++I+RD+KRFHHFR
Sbjct: 171 HSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRD 230
Query: 645 GQCSCSDYW 653
G CSC DYW
Sbjct: 231 GNCSCGDYW 239
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 153/316 (48%), Gaps = 8/316 (2%)
Query: 80 VISTIKSVSQKPHLL---QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFE 136
V S +K+ S++ L Q+H+ +V + D V + A G + D R+ F+
Sbjct: 287 VCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD---CRKVFD 343
Query: 137 QINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVG 196
++ + ++I A++ ++ + L+R M+RR + AN L+ +++C ++
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 197 GVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVR 256
G ++H + K+ + + + + ++ LY +C + DA V ++P RD V+W MIS C
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+AL M EP+ T SL G IH+ + +
Sbjct: 464 LGHESEALDFLKEM--IQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNV 521
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
+ ++LI MY++CG + +A+ VF P K++VSW AMI G A NG+ +EA++ M+
Sbjct: 522 FVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAE 581
Query: 377 GIRPDDQTFTGVLSAC 392
G DD F +LS C
Sbjct: 582 GFEVDDYIFATILSTC 597
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 166/355 (46%), Gaps = 6/355 (1%)
Query: 125 LQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIA-ANPLSSSF 183
L D +Y+R+ F+ + + MI Y + L+ D + GI N
Sbjct: 130 LGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVC 189
Query: 184 AVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRD 243
+ C R + G QVH N+ K G + ++ ++++ Y+QC + A + FD M ++D
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 244 TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERI 303
++W +IS C R A+ +F M ++ P++ T +L FG ++
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGM--LNHWFLPNEFTVCSILKACSEEKALRFGRQV 306
Query: 304 HNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYG 363
H+ +++R + + SL+ MY++CG + +VF G N++ V+W+++I+ A G+G
Sbjct: 307 HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFG 366
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGC 423
+EAI F M+R + ++ T +L AC G + G ++I I N++
Sbjct: 367 EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGST 425
Query: 424 MVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE 478
+V L + G A+ V+ + + D W ++ C GH + ++ +I+
Sbjct: 426 LVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGCSSLGHESEALDFLKEMIQ 479
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 188/407 (46%), Gaps = 10/407 (2%)
Query: 95 QIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYS 154
Q+H ++V V + V + A G L + R F+ + V + +I A S
Sbjct: 205 QVHGNMV-KVGVGNLIVESSLVYFYAQCGELTSAL---RAFDMMEEKDVISWTAVISACS 260
Query: 155 MSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSL 214
K + ++ M N + +K+C + G QVH V K ++D
Sbjct: 261 RKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF 320
Query: 215 LLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS 274
+ T++MD+Y++C + D KVFD M R+TV W +I+ R +A+SLF +M+
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKR-- 378
Query: 275 NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDK 334
+++T +L G+ +H I++ + + ++L+ +Y +CG
Sbjct: 379 RHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRD 438
Query: 335 AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
A+ V P++ VVSW+AMISG + G+ EA++ +EM + G+ P+ T++ L AC++
Sbjct: 439 AFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACAN 498
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
S + G S ++ N+ ++ + + G + +A+ V +M K + W+
Sbjct: 499 SESLLIGRSIHSIAKKNHALS-NVFVGSALIHMYAKCGFVSEAFRVFDSMPEK-NLVSWK 556
Query: 455 TLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWE 501
++ +G +++ R+ E + E DY+ I S+ G E
Sbjct: 557 AMIMGYARNGFCREALKLMYRM-EAEGFEVDDYI-FATILSTCGDIE 601
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 4/199 (2%)
Query: 268 DVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYS 327
+V Q S+ + + V N + +RIH ++ I N+LI+
Sbjct: 69 NVNQDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCV 128
Query: 328 RCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIR-PDDQTFT 386
R G L A +VF P K+ V+W+AMI G G EA FE+ + GIR +++ F
Sbjct: 129 RLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFV 188
Query: 387 GVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAV 446
+L+ CS + G M+ + G+ N+ +V + G L A M
Sbjct: 189 CLLNLCSRRAEFELGRQVHGNMV-KVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEE 246
Query: 447 KPDPTIWRTLLGACRIHGH 465
K D W ++ AC GH
Sbjct: 247 K-DVISWTAVISACSRKGH 264
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 191/459 (41%), Gaps = 87/459 (18%)
Query: 77 KEQVISTIKSVSQK---PHLLQIHAHIVCTTLVHDPAVSLHFLSRV-ALSGPLQDP-IYS 131
+E +S SQ P L QIHA ++ + P S ++ SR+ + L+ P Y+
Sbjct: 3 RELTVSLAAIASQALTFPQLNQIHAQLIVFNSL--PRQS-YWASRIISCCTRLRAPSYYT 59
Query: 132 RRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRF 191
R F+ + P V N+M + +S D L LY R GI + S +KS RF
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF 119
Query: 192 LDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMI 251
G+ V K G D + +MD+Y + + A KVFD++ QR WNVMI
Sbjct: 120 -----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG 311
S + +A LFD+M E D V+ +M G
Sbjct: 175 SGYWKWGNKEEACKLFDMMP------ENDVVSWT---------------------VMITG 207
Query: 312 YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
+ +L N A + F P KSVVSW+AM+SG A NG+ ++A+ F
Sbjct: 208 FAKVKDLEN--------------ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFN 253
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSG----------LVDE---------GMSFFD------ 406
+M R+G+RP++ T+ V+SACS L+DE + D
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 407 ------RMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGAC 460
R+ E G N+ + M+ R G + A ++ TM K + W +L+
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP-KRNVVSWNSLIAGY 372
Query: 461 RIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGH 499
+G L E +I+ D V ++++ S+ GH
Sbjct: 373 AHNGQAALAIEFFEDMIDY-GDSKPDEVTMISVLSACGH 410
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 150/346 (43%), Gaps = 55/346 (15%)
Query: 123 GPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSS 182
++D +R++F+++ V +N M+ Y+ + + L L+ DM R G+ N +
Sbjct: 209 AKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWV 268
Query: 183 FAVKSCI---------RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDAC 233
+ +C + ++ +V N F + TA++D++++CR A
Sbjct: 269 IVISACSFRADPSLTRSLVKLIDEKRVRLNCF---------VKTALLDMHAKCRDIQSAR 319
Query: 234 KVFDEM-PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTS------------------ 274
++F+E+ QR+ V WN MIS R A LFD M +
Sbjct: 320 RIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAA 379
Query: 275 ------------NKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSL 322
+PD+VT LE G+ I +YI + + SL
Sbjct: 380 LAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSL 439
Query: 323 IAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDD 382
I MY+R G L +A VF + VVS++ + + A NG G E + +M+ GI PD
Sbjct: 440 IFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDR 499
Query: 383 QTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
T+T VL+AC+ +GL+ EG F + P HY CM DLL
Sbjct: 500 VTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 134/303 (44%), Gaps = 39/303 (12%)
Query: 196 GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTVAWNVMISCCV 255
G + C +F ++D + T ++ +++ + ++A K FD MP++ V+WN M+S
Sbjct: 181 GNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYA 240
Query: 256 RNNRTRDALSLFD----------------VMQSTSNKCEP-----------------DDV 282
+N T DAL LF+ V+ + S + +P +
Sbjct: 241 QNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCF 300
Query: 283 TXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGT 342
++ RI N E G + N++I+ Y+R G + A ++F
Sbjct: 301 VKTALLDMHAKCRDIQSARRIFN---ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
Query: 343 PNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG-IRPDDQTFTGVLSACSHSGLVDEG 401
P ++VVSW+++I+G A NG AIE FE+M G +PD+ T VLSAC H ++ G
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 402 MSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACR 461
D I + I N Y ++ + R G L +A V M + D + TL A
Sbjct: 418 DCIVD-YIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-DVVSYNTLFTAFA 475
Query: 462 IHG 464
+G
Sbjct: 476 ANG 478
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 167/384 (43%), Gaps = 20/384 (5%)
Query: 115 FLSRVALSGPLQDPIYSRRFFEQIN-RPIVSHFNTMIRAYSMSDSP-QKGLYLYRDMRRR 172
+S A SG ++ + + E+ +P + +N ++ + +P K L M+
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 173 GIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDA 232
GIA + + + + C R QV + G D + A++D+Y + + +A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 233 CKVFDEMPQR----DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXX 288
KV +EM V +N +IS R+ +A+ L + M K PD T
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK--PDVFTYTTLL 391
Query: 289 XXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVF----MGTPN 344
+E I + G I N+ I MY G + ++F + +
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 345 KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSF 404
+V+W+ +++ NG E F+EM+R G P+ +TF ++SA S G ++ M+
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 405 FDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMA---VKPDPTIWRTLLGACR 461
+ RM+ + G+TP++ Y ++ L R G+ +++ +V+ M KP+ + +LL A
Sbjct: 512 YRRML-DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 462 IHGHV----TLGERVIERLIELKA 481
+ +L E V +IE +A
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRA 594
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 129/305 (42%), Gaps = 17/305 (5%)
Query: 135 FEQINR----PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
F+++ R P FNT+I AYS S ++ + +YR M G+ + LS+ V + +
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD-LSTYNTVLAALA 535
Query: 191 FLDIVGGVQVHCNVFKDGH-QSDSLLLTAVMDLYSQCRK----GDDACKVFDEMPQRDTV 245
+ + +DG + + L +++ Y+ ++ A +V+ + + V
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 246 AWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHN 305
++ C + + +A F ++ PD T + + +
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERG--FSPDITTLNSMVSIYGRRQMVAKANGVLD 653
Query: 306 YIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS----VVSWSAMISGLAVNG 361
Y+ ERG+ ++ NSL+ M+SR K+ E+ K ++S++ +I N
Sbjct: 654 YMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNT 713
Query: 362 YGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHY 421
++A F EM+ GI PD T+ + + + + +E + MI + G PN + Y
Sbjct: 714 RMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI-KHGCRPNQNTY 772
Query: 422 GCMVD 426
+VD
Sbjct: 773 NSIVD 777
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/439 (18%), Positives = 161/439 (36%), Gaps = 75/439 (17%)
Query: 76 HKE--QVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYSRR 133
H+E QV +K+ + +A + H P ++ L+ + L+G +S
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG------FS-- 346
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
P + +N++I AY+ + + L M +G + F + + +
Sbjct: 347 -------PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD----VFTYTTLLSGFE 395
Query: 194 IVGGVQVHCNVFKD----GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTV 245
G V+ ++F++ G + + A + +Y K + K+FDE+ D V
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 246 AWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHN 305
WN +++ +N + +F M+ P+ T S E ++
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAG--FVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 306 YIMERGYGGAINLSNSLIAMYSRCGCLDK------------------------------- 334
+++ G ++ N+++A +R G ++
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGK 573
Query: 335 --------AYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFT 386
A EV+ G V ++ + EA AF E++ G PD T
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633
Query: 387 GVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEV---ITT 443
++S +V + D M E G TP++ Y ++ + R+ K+ E+ I
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYM-KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 444 MAVKPDPTIWRTLLGA-CR 461
+KPD + T++ A CR
Sbjct: 693 KGIKPDIISYNTVIYAYCR 711
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 165/408 (40%), Gaps = 52/408 (12%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V + +I Y+ K L + R M+ G+ N + S + ++ D V
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVR 256
++ K+G + D +L ++ + D A + EM + T + +I +
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+ R +L +FD+M+ C P T +E I + + G
Sbjct: 602 SGDMRRSLEVFDMMRRCG--CVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANE 659
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKS----VVSWSAMI----------SGLAV--- 359
+ ++ Y+ G KA+E F N+ + ++ A++ S LAV
Sbjct: 660 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 719
Query: 360 -----------------NGYGK-----EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGL 397
+G+ + EA + ++M++ G++PD T+T +SACS +G
Sbjct: 720 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 779
Query: 398 VDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA---YEVITTMAVKPDPTIWR 454
++ + M G+ PNI Y ++ RA L +KA YE + M +KPD ++
Sbjct: 780 MNRATQTIEEMEA-LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 455 TLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHWEK 502
LL + + ++ E I + +E + L++++ +A HW K
Sbjct: 839 CLLTS--LLSRASIAEAYIYSGVMTICKEMVEAGLIVDM-GTAVHWSK 883
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/481 (20%), Positives = 187/481 (38%), Gaps = 88/481 (18%)
Query: 136 EQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIV 195
E I+ PI + ++TM+ Y+M +KGL +++ ++ G ++ + + I
Sbjct: 443 EGIDAPI-AIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501
Query: 196 GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMI 251
++V + ++G + + + +++ + + + +A VF++M + D + +N +I
Sbjct: 502 KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 252 SC-CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMER 310
S C N R A+ MQ ++ P T F IH Y
Sbjct: 562 SAFCGMGNMDR-AIQTVKEMQKLRHR--PTTRT---------------FMPIIHGY---- 599
Query: 311 GYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
G + S + M RCGC+ +V +++ +I+GL ++A+E
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVP------------TVHTFNGLINGLVEKRQMEKAVEIL 647
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGE------------------- 411
+EM G+ ++ T+T ++ + G + +F R+ E
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 412 ---------------FGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIW 453
I N Y ++D R G + +A ++I M VKPD +
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Query: 454 RTLLGACRIHGHVTLGERVIERLIELKAQ-EAGDYVLLLNIYSSAGHWEKVAEVRTLMKE 512
+ + AC G + + IE + L + Y L+ ++ A EK MK
Sbjct: 768 TSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 827
Query: 513 KAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGE--IYETLDDINKQLKIAGYVVELSSEL 570
I+ K V H + +S E IY + I K++ AG +V++ + +
Sbjct: 828 MGIKPD--------KAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAV 879
Query: 571 H 571
H
Sbjct: 880 H 880
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 145/326 (44%), Gaps = 16/326 (4%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
FNT+I + L L+++M +GI N ++ S + + Q+ ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTR 261
+ + + A++D + + K +A K++D+M +R D +N +++ ++R
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
A +F+ M S C PD VT +E G + + RG G +
Sbjct: 383 KAKQMFEFM--VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 322 LIAMYSRCGCLDKAYEVFM-----GTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
LI G D A +VF G P ++++S ++ GL NG ++A+E F+ MQ+
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVP-PDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 377 GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDK 436
I+ D +T ++ +G VD+G F + + G+ PN+ Y M+ L LL +
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQE 558
Query: 437 AYEVITTMAVK---PDPTIWRTLLGA 459
AY ++ M P+ + TL+ A
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 138/333 (41%), Gaps = 15/333 (4%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P + FN ++ A + + L M+R I + + + R I + +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVR 256
+ K G++ + L+++++ Y ++ DA + D+M + DT+ + +I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+N+ +A++L D M C+P+ VT + + N + +
Sbjct: 203 HNKASEAVALVDRM--VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAVNGYGKEAIEAFEE 372
+ N++I + +D A +F K +VV++S++IS L G +A + +
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M I P+ TF ++ A G E +D MI I P+I Y +V+
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNGFCMHD 379
Query: 433 LLDKAYEVITTMAVK---PDPTIWRTLL-GACR 461
LDKA ++ M K PD + TL+ G C+
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
S+V+ S++++G +A+ ++M +G RPD TFT ++ E ++
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRI 462
DRM+ + G PN+ YG +V+ L + G D A ++ M ++ D I+ T++ +
Sbjct: 214 DRMV-QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 463 HGHVTLGERVIERLIELKAQEAG--DYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQ 516
+ HV + + + E K Y L++ S G W +++ + M EK I
Sbjct: 273 YRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 151/333 (45%), Gaps = 15/333 (4%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P + ++I Y + ++G L +M++R I +P + VK D+ G +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVR 256
+ G + + ++ T ++ + Q + DA +V EM ++ D +N +I +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
R +A S +++ N +P+ T + ++ + E G
Sbjct: 500 AKRMDEARSF--LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVV----SWSAMISGLAVNGYGKEAIEAFEE 372
L LI Y + G + +A + ++ ++ +++ +++GL N +A E F E
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M+ GI PD ++ +++ S G + + S FD M+ E G+TPN+ Y ++ R+G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPNVIIYNMLLGGFCRSG 676
Query: 433 LLDKAYEVITTMAVK---PDPTIWRTLL-GACR 461
++KA E++ M+VK P+ + T++ G C+
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 148/386 (38%), Gaps = 59/386 (15%)
Query: 136 EQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIV 195
EQ P + +N++I S + + +M G+ N + + I +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 196 GGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGD--DACKVFDEMPQR----DTVAWNV 249
+ + + G + +L T +++ Y C+KG +AC + M + D + V
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEY--CKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME 309
+++ +N++ DA +F M+ PD + +++ I + ++E
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKG--IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 310 RGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSV----VSWSAMISGLAVNGYGKE 365
G + + N L+ + R G ++KA E+ K + V++ +I G +G E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 366 AIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFD-----------------RM 408
A F+EM+ G+ PD +T ++ C V+ ++ F
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINW 775
Query: 409 IGEFGIT--------------------PNIHHYGCMVDLLGRAGLLDKAYEVITTMA--- 445
+ +FG T PN Y M+D L + G L+ A E+ M
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 446 VKPDPTIWRTLLGACRIHGHVTLGER 471
+ P + +LL +G+ +G R
Sbjct: 836 LMPTVITYTSLL-----NGYDKMGRR 856
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/354 (18%), Positives = 139/354 (39%), Gaps = 47/354 (13%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V + +I +S + QK ++ +M G+ N + + + R +I ++
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGD--DACKVFDEMPQR----DTVAWNVMISCC 254
+ G +++ ++D Y C+ GD +A ++FDEM + D+ + ++ C
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGY--CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY-- 312
R N A+++F + C E + N +M+ +
Sbjct: 743 CRLNDVERAITIFG---TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 313 -GGAINLS-NSLIAMYSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAVNGYGKEA 366
G +++ N +I + G L+ A E+F N +V++++++++G G E
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 367 IEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD 426
F+E GI PD ++ +++A G+ + + D+M + N GC
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK-----NAVDDGC--- 911
Query: 427 LLGRAGLLDKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELK 480
K + R LL G + + E+V+E ++ L+
Sbjct: 912 --------------------KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 143/326 (43%), Gaps = 16/326 (4%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
FNT+I + L L+++M +GI N ++ S + + Q+ ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTR 261
+ + + A++D + + K +A K+ D+M +R D +N +I+ ++R
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
A +F+ M S C PD T +E G + + RG G +
Sbjct: 308 KAKQMFEFM--VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 322 LIAMYSRCGCLDKAYEVFM-----GTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
LI G D A +VF G P ++++S ++ GL NG ++A+E F+ MQ+
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVP-PDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 377 GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDK 436
I+ D +T ++ +G VD+G F + + G+ PN+ Y M+ L LL +
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQE 483
Query: 437 AYEVITTMAVK---PDPTIWRTLLGA 459
AY ++ M PD + TL+ A
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 141/333 (42%), Gaps = 15/333 (4%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P + FN ++ A + + L M+R GI+ N + + + R I + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVR 256
+ K G++ + L+++++ Y ++ DA + D+M + DT+ + +I
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+N+ +A++L D M C+P+ VT ++ + N + +
Sbjct: 128 HNKASEAVALVDRM--VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAVNGYGKEAIEAFEE 372
+ N++I + +D A +F K +VV++S++IS L G +A + +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M I P+ TF ++ A G E D MI I P+I Y +++
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYNSLINGFCMHD 304
Query: 433 LLDKAYEVITTMAVK---PDPTIWRTLL-GACR 461
LDKA ++ M K PD + TL+ G C+
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
S+V+ S++++G +A+ ++M +G RPD TFT ++ E ++
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRI 462
DRM+ + G PN+ YG +V+ L + G +D A+ ++ M ++ D I+ T++ +
Sbjct: 139 DRMV-QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 463 HGHVTLGERVIERLIELKAQEAG--DYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQ 516
+ HV + + + E K Y L++ S G W +++ + M EK I
Sbjct: 198 YRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 128/310 (41%), Gaps = 33/310 (10%)
Query: 136 EQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGI-----AANPLSSSFAVKSCIR 190
++IN +V+ FN +I A+ + L+ DM +R I N L + F + +
Sbjct: 249 KKINPNLVT-FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVA 246
+ V + F D ++L+ + + ++ +D ++F EM R DTV
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKG-----FCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
+ +I + +A +F Q S+ PD +T LE + +Y
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFK--QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAVNGY 362
+ + I + ++I + G +D +++F K +VV+++ MISGL
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG-------LVDEGMSFFDRMIGE---F 412
+EA ++M+ G PD T+ ++ A G L+ E S R +G+
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC--RFVGDASTI 538
Query: 413 GITPNIHHYG 422
G+ N+ H G
Sbjct: 539 GLVANMLHDG 548
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 158/353 (44%), Gaps = 42/353 (11%)
Query: 132 RRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRF 191
R+ E+ + V ++ +I + S L L+ +M +GI A+ ++ S
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS--------- 284
Query: 192 LDIVGGVQVHCNVFK--DGHQS-----------DSLLLTAVMDLYSQCRKGDDACKVFDE 238
++GG+ CN K DG + D + +A++D++ + K +A ++++E
Sbjct: 285 -SLIGGL---CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 239 MPQR----DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXX 294
M R DT+ +N +I + N +A +FD+M S CEPD VT
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM--VSKGCEPDIVTYSILINSYCKA 398
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFM-----GTPNKSVVS 349
++ G R+ I +G N+L+ + + G L+ A E+F G P SVV+
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP-PSVVT 457
Query: 350 WSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI 409
+ ++ GL NG +A+E FE+MQ+ + + ++ ++ VD+ S F +
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL- 516
Query: 410 GEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGA 459
+ G+ P++ Y M+ L + G L +A + M PD + L+ A
Sbjct: 517 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 142/344 (41%), Gaps = 54/344 (15%)
Query: 134 FFEQI--NRPIVS--HFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
FE + +RP+ + FN + A + + L + M GI + + + +
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFD---EMPQR-DTV 245
R ++ V +K G++ D++ + +++ + + +A + D EM QR D V
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 246 AWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHN 305
+ +I+ R +AL L D M +PD+VT
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRM--VEYGFQPDEVT---------------------- 212
Query: 306 YIMERGYGGAINL----SNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNG 361
YG +N NS +A LD ++ SVV +S +I L +G
Sbjct: 213 ------YGPVLNRLCKSGNSALA-------LDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 362 YGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHY 421
+A+ F EM+ GI+ D T++ ++ + G D+G MIG I P++ +
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTF 318
Query: 422 GCMVDLLGRAGLLDKAYEV---ITTMAVKPDPTIWRTLL-GACR 461
++D+ + G L +A E+ + T + PD + +L+ G C+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 158/356 (44%), Gaps = 55/356 (15%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P ++ F +++ +D+ +K + + DM +G +P+ S+ + C++ D G +++
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 201 HCNVFKD--GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT------VAWNVMIS 252
+ + + G D ++ +M Y +A + ++E ++ +A+N ++
Sbjct: 259 YQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLE 318
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
N + +AL LFD ++ N P +
Sbjct: 319 ALSENGKFDEALKLFDAVKKEHNP--PRHL------------------------------ 346
Query: 313 GGAINLS--NSLIAMYSRCGCLDKAYEVF--MG----TPNKSVVSWSAMISGLAVNGYGK 364
A+NL N ++ Y G ++A EVF MG +P+ +S++ +++ L N
Sbjct: 347 --AVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPD--TLSFNNLMNQLCDNELLA 402
Query: 365 EAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCM 424
EA + + EM+ ++PD+ T+ ++ C G +DEG +++ M+ E + PN+ Y +
Sbjct: 403 EAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMV-ESNLRPNLAVYNRL 461
Query: 425 VDLLGRAGLLDKAYEVITTMA--VKPDPTIWRTLLGACRIHGHVTLGERVIERLIE 478
D L +AG LD A M +K D ++ ++ A G + ++++ +++
Sbjct: 462 QDQLIKAGKLDDAKSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLD 517
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 61/308 (19%)
Query: 300 GERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGT------PNKSVVSWSAM 353
+RI GYG + ++LI+ Y R G ++A VF PN +V+++A+
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPN--LVTYNAV 309
Query: 354 ISGLAVNGYG-KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEF 412
I G K+ + F+EMQR G++PD TF +L+ CS GL + + FD M
Sbjct: 310 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR- 368
Query: 413 GITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVK---PDPTIWRT-------------- 455
I ++ Y ++D + + G +D A+E++ M VK P+ + T
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 456 --LLGACR----------------IHGHVTLGERVIERLIELKA----QEAGDYVLLLNI 493
L G R I+ V E ++ L E+ + ++ Y LL
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 494 YSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVVDDVSHKRKGEIYETLDDI 553
Y G +++V +V T MK + + P T + ++D S KG +Y+ +I
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHV--LPNLLT-------YSTLIDGYS---KGGLYKEAMEI 536
Query: 554 NKQLKIAG 561
++ K AG
Sbjct: 537 FREFKSAG 544
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 22/312 (7%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRD-MRRRGIAANPLSSSFAVKSCIRFLDIVGGV 198
RP + +N +I A K + + D M+R G+ + ++ + + C R GG+
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR-----GGL 354
Query: 199 -QVHCNVFKDGH----QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNV 249
+ N+F + + D ++D + + D A ++ +MP + + V+++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME 309
+I + R +AL+LF M+ D V+ E I +
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLG--IALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 310 RGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVV----SWSAMISGLAVNGYGKE 365
G + N+L+ Y + G D+ +VF + V+ ++S +I G + G KE
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 366 AIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMV 425
A+E F E + G+R D ++ ++ A +GLV +S D M E GI+PN+ Y ++
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSII 591
Query: 426 DLLGRAGLLDKA 437
D GR+ +D++
Sbjct: 592 DAFGRSATMDRS 603
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 142/363 (39%), Gaps = 48/363 (13%)
Query: 162 GLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMD 221
G Y + R R +S + + R+ + ++ F G+ + +A++
Sbjct: 217 GFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALIS 276
Query: 222 LYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNN-RTRDALSLFDVMQSTSNK 276
Y + ++A VF+ M + + V +N +I C + + FD MQ N
Sbjct: 277 AYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR--NG 334
Query: 277 CEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAY 336
+PD +T E + + + R + N+L+ + G +D A+
Sbjct: 335 VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAF 394
Query: 337 EVFMGTPNK----SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSAC 392
E+ P K +VVS+S +I G A G EA+ F EM+ +GI D ++ +LS
Sbjct: 395 EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIY 454
Query: 393 SHSGLVDEGMSF---------------FDRMIGEFG-------------------ITPNI 418
+ G +E + ++ ++G +G + PN+
Sbjct: 455 TKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL 514
Query: 419 HHYGCMVDLLGRAGLLDKAYEV---ITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIER 475
Y ++D + GL +A E+ + ++ D ++ L+ A +G V +I+
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 476 LIE 478
+ +
Sbjct: 575 MTK 577
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 318 LSNSLIAMYSRCGCLDKAYEVF----MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
L++++I+ R G + A +F G +V ++SA+IS +G +EAI F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 374 QRIGIRPDDQTFTGVLSACSHSGL-VDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
+ G+RP+ T+ V+ AC G+ + FFD M G+ P+ + ++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-QRNGVQPDRITFNSLLAVCSRGG 353
Query: 433 LLDKA---YEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERL-IELKAQEAGDYV 488
L + A ++ +T ++ D + TLL A G + L ++ ++ ++ Y
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 489 LLLNIYSSAGHWEKV 503
+++ ++ AG +++
Sbjct: 414 TVIDGFAKAGRFDEA 428
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 118/284 (41%), Gaps = 14/284 (4%)
Query: 133 RFFEQINR----PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
+FF+++ R P FN+++ S + L+ +M R I + S + + +
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDT 244
+ + ++ + + + + V+D +++ + D+A +F EM D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 245 VAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIH 304
V++N ++S + R+ +AL + M S K D VT + +++
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIK--KDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 305 NYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS----VVSWSAMISGLAVN 360
+ + ++LI YS+ G +A E+F + VV +SA+I L N
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 361 GYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSF 404
G A+ +EM + GI P+ T+ ++ A S +D +
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 149/331 (45%), Gaps = 17/331 (5%)
Query: 161 KGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVM 220
+ L+L M R+G + + + +K +I V+V + + Q D A++
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALI 165
Query: 221 DLYSQCRKGDDACKVFDEMPQRD----TVAWNVMI-SCCVRNNRTRDALSLFDVMQSTSN 275
+ + + + DDA +V D M +D TV +N+MI S C +R + L+L + Q S+
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC---SRGKLDLALKVLNQLLSD 222
Query: 276 KCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKA 335
C+P +T ++ ++ + ++ RG + N++I + G +D+A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 336 YEVFMGTPNKS----VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
+E+ K V+S++ ++ L G +E + +M P+ T++ +++
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKP 448
G ++E M+ +++ E G+TP+ + Y ++ R G LD A E + TM P
Sbjct: 343 LCRDGKIEEAMNLL-KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 449 DPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
D + T+L +G + +L E+
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEV 432
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 320 NSLIAMYSRCGCLDKAYEVFMGTPNKS----VVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
N+LI + + +D A V +K V+++ MI L G A++ ++
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
+P T+T ++ A G VDE + D M+ G+ P++ Y ++ + + G++D
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR-GLKPDMFTYNTIIRGMCKEGMVD 280
Query: 436 KAYEVITTMAVK---PDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ-EAGDYVLLL 491
+A+E++ + +K PD + LL A G GE+++ ++ K Y +L+
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 492 NIYSSAGHWEKVAEVRTLMKEKAI 515
G E+ + LMKEK +
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGL 364
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 152/357 (42%), Gaps = 22/357 (6%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
+P V + +I A + + L L +M RG+ + + + ++ + + +
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 200 VHCNVFKDGHQSD----SLLLTAVMDLYSQCRKGDD-ACKVFDEMPQRDTVAWNVMISCC 254
+ N+ G + D ++LL A+++ + +G+ K+F E + V ++++I+
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLN-QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
R+ + +A++L +M+ PD + L+ ++ G
Sbjct: 344 CRDGKIEEAMNLLKLMKEKG--LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 315 AINLSNSLIAMYSRCGCLDKAYEVF--MG----TPNKSVVSWSAMISGLAVNGYGKEAIE 368
I N+++A + G D+A E+F +G +PN S S++ M S L +G A+
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS--SYNTMFSALWSSGDKIRALH 459
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF-DRMIGEFGITPNIHHYGCMVDL 427
EM GI PD+ T+ ++S G+VDE D EF P++ Y ++
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF--HPSVVTYNIVLLG 517
Query: 428 LGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKA 481
+A ++ A V+ +M +P+ T + L+ G+ + L+ + A
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA 574
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 19/270 (7%)
Query: 208 GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTRDA 263
G + D T ++ + ++ + K+ DEM + +TV +N +I R N ++A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLI 323
+++F+ MQ CEPD VT L+ ++ + E G + +I
Sbjct: 414 MNVFNQMQEAG--CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 324 AMYSRCGCLDKAYEVFMG------TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
+ G L A+ +F TPN +V+++ MI+ A + A++ + +MQ G
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPN--LVTFNIMIALHAKARNYETALKLYRDMQNAG 529
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA 437
+PD T++ V+ H G ++E F M + + P+ YG +VDL G+AG +DKA
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKA 588
Query: 438 ---YEVITTMAVKPD-PTIWRTLLGACRIH 463
Y+ + ++P+ PT L R+H
Sbjct: 589 WQWYQAMLQAGLRPNVPTCNSLLSTFLRVH 618
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 116/266 (43%), Gaps = 18/266 (6%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLS--SSFAVKSCIRFLDIVGG 197
+P +N +I +Y ++ ++ + ++ M+ G + ++ + + + FLDI
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA-- 448
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISC 253
+ ++ + + G D+ + +++ + A ++F EM + + V +N+MI+
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIAL 508
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+ AL L+ MQ+ +PD VT LE E + + + +
Sbjct: 509 HAKARNYETALKLYRDMQNAG--FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGT------PNKSVVSWSAMISGLAVNGYGKEAI 367
+ L+ ++ + G +DKA++ + PN V + ++++S EA
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPN--VPTCNSLLSTFLRVHRMSEAY 624
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACS 393
+ M +G+ P QT+T +LS C+
Sbjct: 625 NLLQSMLALGLHPSLQTYTLLLSCCT 650
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 146/331 (44%), Gaps = 16/331 (4%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V +NT+I L L+++M +GI N ++ S + + ++
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDT----VAWNVMISCCVR 256
++ + D +A++D + + K +A K++DEM +R V ++ +I+
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
++R +A +F+ M S C PD VT +E G + + +RG G
Sbjct: 374 HDRLDEAKQMFEFM--VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFM-----GTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
N LI + G D A E+F G P ++++++ ++ GL NG ++A+ FE
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP-PNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
+QR + P T+ ++ +G V++G F + + G+ P++ Y M+ R
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRK 549
Query: 432 GLLDKAYEVITTM---AVKPDPTIWRTLLGA 459
G ++A + M P+ + TL+ A
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 155/366 (42%), Gaps = 50/366 (13%)
Query: 119 VALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANP 178
VAL G + + SR F P + F+ ++ A + + + L M+ GI N
Sbjct: 66 VALFGEM---VKSRPF------PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 179 LSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDE 238
+ S + R + + V + K G++ + + L+++++ Y ++ +A + D+
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 239 M----PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXX 294
M Q +TV +N +I +N+ +A++L D M + C+PD VT
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM--VAKGCQPDLVT----------- 223
Query: 295 NSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMI 354
+G ++ A NL N + G V+ ++ +I
Sbjct: 224 ----YGVVVNGLCKRGDTDLAFNLLNKMEQ----------------GKLEPGVLIYNTII 263
Query: 355 SGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGI 414
GL + +A+ F+EM+ GIRP+ T++ ++S + G + MI E I
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKI 322
Query: 415 TPNIHHYGCMVDLLGRAGLL---DKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGER 471
P++ + ++D + G L +K Y+ + ++ P + +L+ +H + ++
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 472 VIERLI 477
+ E ++
Sbjct: 383 MFEFMV 388
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 141/323 (43%), Gaps = 12/323 (3%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
RP F T+I + + + + L M +RG N ++ V + DI
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCV 255
+ + +++ ++ + V+D + R DDA +F EM + + + ++ +ISC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 256 RNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA 315
R DA L M K P+ VT L E++++ +++R
Sbjct: 307 NYERWSDASRLLSDM--IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAVNGYGKEAIEAFE 371
I +SLI + LD+A +F +K +VV+++ +I+G E +E F
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
EM + G+ + T+T ++ + D F +M+ + G+ PNI Y ++D L +
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKN 483
Query: 432 GLLDKAYEVITTMA-VKPDPTIW 453
G L+KA V + K +PTI+
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIY 506
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 162/401 (40%), Gaps = 46/401 (11%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P + FN ++ A + + L M+R GI+ N + + + R I + +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVR 256
+ K G++ + L+++++ Y ++ DA + D+M + DT+ + +I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+N+ +A++L D M C+P+ VT +G ++ A
Sbjct: 203 HNKASEAVALVDRM--VQRGCQPNLVT---------------YGVVVNGLCKRGDIDLAF 245
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
NL N + A +VV +S +I L + +A+ F EM+
Sbjct: 246 NLLNKMEA----------------AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 377 GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLL-- 434
G+RP+ T++ ++S + + MI E I PN+ + ++D + G L
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMI-ERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 435 -DKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKA-QEAGDYVLLLN 492
+K Y+ + ++ PD + +L+ +H + + + E +I Y L+N
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 493 IYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEF 533
+ A ++ E+ M ++ + T+ ++H F
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGN----TVTYTTLIHGF 445
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 136/307 (44%), Gaps = 11/307 (3%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
++T+I + L L+ +M +G+ N ++ S + + ++ ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTR 261
+ + + A++D + + K +A K++DEM +R D ++ +I+ ++R
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
+A +F++M S C P+ VT ++ G + + +RG G +
Sbjct: 383 EAKHMFELM--ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 322 LIAMYSRCGCLDKAYEVFMGTPNKSV----VSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
LI + + D A VF + V ++++ ++ GL NG ++A+ FE +QR
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA 437
+ P T+ ++ +G V++G F + + G+ P++ Y M+ R GL ++A
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 438 YEVITTM 444
+ M
Sbjct: 560 DALFRKM 566
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 148/332 (44%), Gaps = 22/332 (6%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V ++T++ Y K L M+R+G+ N + R + +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGD--DACKVFDEMPQRD----TVAWNVMISCC 254
+ + G D+++ T ++D + C++GD A K F EM RD + + +IS
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGF--CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
+ +A LF M EPD VT ++ R+HN++++ G
Sbjct: 397 CQIGDMVEAGKLFHEMFCKG--LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 315 AINLSNSLIAMYSRCGCLDKAYEVF-----MG-TPNKSVVSWSAMISGLAVNGYGKEAIE 368
+ +LI + G LD A E+ +G PN + +++++++GL +G +EA++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN--IFTYNSIVNGLCKSGNIEEAVK 512
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
E + G+ D T+T ++ A SG +D+ M+G+ G+ P I + +++
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGF 571
Query: 429 GRAGLLDKAYEVITTMAVK---PDPTIWRTLL 457
G+L+ +++ M K P+ T + +L+
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 101/253 (39%), Gaps = 10/253 (3%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V + T+I L +M + G+ N + + V + +I V++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTVAWNVMISCCVR 256
G +D++ T +MD Y + + D A ++ EM Q V +NV+++
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+ D L + M + P+ T N+L+ I+ + RG G
Sbjct: 574 HGMLEDGEKLLNWMLAKG--IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAVNGYGKEAIEAFEE 372
+L+ + + + +A+ +F K SV ++S +I G EA E F++
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 373 MQRIGIRPDDQTF 385
M+R G+ D + F
Sbjct: 692 MRREGLAADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 148/332 (44%), Gaps = 22/332 (6%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V ++T++ Y K L M+R+G+ N + R + +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGD--DACKVFDEMPQRD----TVAWNVMISCC 254
+ + G D+++ T ++D + C++GD A K F EM RD + + +IS
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGF--CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
+ +A LF M EPD VT ++ R+HN++++ G
Sbjct: 397 CQIGDMVEAGKLFHEMFCKG--LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 315 AINLSNSLIAMYSRCGCLDKAYEVF-----MG-TPNKSVVSWSAMISGLAVNGYGKEAIE 368
+ +LI + G LD A E+ +G PN + +++++++GL +G +EA++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN--IFTYNSIVNGLCKSGNIEEAVK 512
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
E + G+ D T+T ++ A SG +D+ M+G+ G+ P I + +++
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGF 571
Query: 429 GRAGLLDKAYEVITTMAVK---PDPTIWRTLL 457
G+L+ +++ M K P+ T + +L+
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 101/253 (39%), Gaps = 10/253 (3%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V + T+I L +M + G+ N + + V + +I V++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTVAWNVMISCCVR 256
G +D++ T +MD Y + + D A ++ EM Q V +NV+++
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+ D L + M + P+ T N+L+ I+ + RG G
Sbjct: 574 HGMLEDGEKLLNWMLAKG--IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAVNGYGKEAIEAFEE 372
+L+ + + + +A+ +F K SV ++S +I G EA E F++
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 373 MQRIGIRPDDQTF 385
M+R G+ D + F
Sbjct: 692 MRREGLAADKEIF 704
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 133/313 (42%), Gaps = 14/313 (4%)
Query: 143 VSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHC 202
V +N M+ YS S K L MR+RG + +S + + + ++ + + V
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 203 --NVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTVAWNVMISCCVR 256
V G + D++ ++ S+ D A KVF++M Q D +N MIS R
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+A LF M+ PD VT + E + ++ + + G+G
Sbjct: 345 CGLAAEAERLF--MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 317 NLSNSLIAMYSRCGCLDKAYEVF-----MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFE 371
N++I MY + G LD A +++ + N ++++ +I L EA
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
EM +GI+P QT++ ++ + +G +E F M+ G P+ Y M+D+L R
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRG 521
Query: 432 GLLDKAYEVITTM 444
KA+ + M
Sbjct: 522 NETRKAWGLYRDM 534
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 123/267 (46%), Gaps = 20/267 (7%)
Query: 218 AVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTRD--ALSLFDVMQ 271
A+M +YS+ K A ++ D M QR D +++N +I+ +++ A+ L D+++
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
++ PD +T ++L+ ++ + + N++I++Y RCG
Sbjct: 290 NSG--LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 332 LDKAYEVFMGTPNKS----VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTG 387
+A +FM K V++++++ A ++ E +++MQ++G D+ T+
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 388 VLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM--- 444
++ G +D + + M G G P+ Y ++D LG+A +A +++ M
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 445 AVKPDPTIWRTLLGACRIHGHVTLGER 471
+KP + L I G+ G+R
Sbjct: 468 GIKPTLQTYSAL-----ICGYAKAGKR 489
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 320 NSLIAMYSRCGCLDKAYEVF----MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
NSL++ Y++CGC ++A +F P+ +V S + ++ L V+G +E EE+Q
Sbjct: 791 NSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQD 850
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
+G + + +L A + +G + E + M G P I Y M++LL + +
Sbjct: 851 MGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAA-GYLPTIRLYRMMIELLCKGKRVR 909
Query: 436 KAYEVITTMA---VKPDPTIWRTLL 457
A +++ M K + IW ++L
Sbjct: 910 DAEIMVSEMEEANFKVELAIWNSML 934
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/330 (17%), Positives = 142/330 (43%), Gaps = 19/330 (5%)
Query: 203 NVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM----PQRDTVAWNVMISCCVRNN 258
N+ + G D ++M Y+QC + A +F+ M P + N+++ +
Sbjct: 777 NLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDG 836
Query: 259 RTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINL 318
R + + + +Q K + N E ++I++ + GY I L
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSI-LLMLDAFARAGNIFEV-KKIYSSMKAAGYLPTIRL 894
Query: 319 SNSLIAMYSRCGCLDKAYEVFMGTPNKS-----VVSWSAMISGL-AVNGYGKEAIEAFEE 372
+I + + G + E+ + ++ + W++M+ A+ Y K+ ++ ++
Sbjct: 895 YRMMIELLCK-GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY-KKTVQVYQR 952
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
++ G+ PD+ T+ ++ +EG +M G+ P + Y ++ G+
Sbjct: 953 IKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM-RNLGLDPKLDTYKSLISAFGKQK 1011
Query: 433 LLDKA---YEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEA-GDYV 488
L++A +E + + +K D + + T++ R G + E++++ + +
Sbjct: 1012 CLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMH 1071
Query: 489 LLLNIYSSAGHWEKVAEVRTLMKEKAIQTT 518
LL+ YSS+G+ ++ +V + +K+ ++ T
Sbjct: 1072 LLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 155/358 (43%), Gaps = 47/358 (13%)
Query: 127 DPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK 186
D + SR F P + FN ++ A + + + + L M+ GI+ + + S +
Sbjct: 73 DMVKSRPF------PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 187 SCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR---- 242
R + + V + K G++ D + L+++++ Y ++ DA + D+M +
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 243 DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
DT + +I +N+ +A++L D Q C+PD VT +G
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVD--QMVQRGCQPDLVT---------------YGTV 229
Query: 303 IHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGY 362
+ N + +R G I+L+ SL+ + G VV ++ +I GL +
Sbjct: 230 V-NGLCKR---GDIDLALSLLKKMEK------------GKIEADVVIYNTIIDGLCKYKH 273
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYG 422
+A+ F EM GIRPD T++ ++S + G + MI E I PN+ +
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPNVVTFS 332
Query: 423 CMVDLLGRAGLL---DKAYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLI 477
++D + G L +K Y+ + ++ PD + +L+ +H + + + E +I
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 144/327 (44%), Gaps = 18/327 (5%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+NT+I L L+ +M +GI + + S + + ++ ++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTR 261
+ + + +A++D + + K +A K++DEM +R D ++ +I+ ++R
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
+A +F++M S C P+ VT +E G + + +RG G +
Sbjct: 381 EAKHMFELM--ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 322 LIAMYSRCGCLDKAYEVFMGT------PNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
LI + + D A VF PN +++++ ++ GL NG +A+ FE +QR
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPN--ILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
+ PD T+ ++ +G V++G F + + G++PN+ Y M+ R G +
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKE 555
Query: 436 KAYEVITTMAVK---PDPTIWRTLLGA 459
+A ++ M P+ + TL+ A
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRA 582
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 180/424 (42%), Gaps = 35/424 (8%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKS-CIRFLDIVGGV 198
+P V FN +I AY ++ LY + + + +K+ C+ L +
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL--IERA 231
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLYSQC---RKG--DDACKVFDEMPQRD-----TVAWN 248
+V ++ H S + V + Y + RKG ++A VF M +RD T +N
Sbjct: 232 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM-KRDRCKPTTETYN 290
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+MI+ + +++ + L+ M+S ++C+P+ T E E I +
Sbjct: 291 LMINLYGKASKSYMSWKLYCEMRS--HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 348
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVF-----MG-TPNKSVVSWSAMISGLAVNGY 362
E G + + N+L+ YSR G A E+F MG P+++ S++ M+ G
Sbjct: 349 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGL 406
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYG 422
+A FEEM+R+GI P ++ +LSA S + V + + M E G+ P+
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM-SENGVEPDTFVLN 465
Query: 423 CMVDLLGRAGLLDKAYEVITTMAVKP---DPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
M++L GR G K +++ M P D + + L+ I+G ER+ E +EL
Sbjct: 466 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN---IYGKAGFLERIEELFVEL 522
Query: 480 KAQ----EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVV 535
K + + + + YS + K EV M + G + L E V
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 582
Query: 536 DDVS 539
+ V+
Sbjct: 583 EQVT 586
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 120/310 (38%), Gaps = 41/310 (13%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
+P +N MI Y + LY +MR N + + V + R +
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTVAWNVMISCCV 255
+ + +DG + D + A+M+ YS+ A ++F M + D ++N+M+
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402
Query: 256 RNNRTRDALSLFDVMQST-------------SNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
R DA ++F+ M+ S + DVT N +E
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462
Query: 303 IHNYI-------------------MERGYGGA-INLSNSLIAMYSRCGCLDKAYEVFMGT 342
+ N + ME G A I+ N LI +Y + G L++ E+F+
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Query: 343 PNKS----VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLV 398
K+ VV+W++ I + + +E FEEM G PD T +LSACS V
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 582
Query: 399 DEGMSFFDRM 408
++ S M
Sbjct: 583 EQVTSVLRTM 592
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 151/364 (41%), Gaps = 22/364 (6%)
Query: 133 RFFEQIN----RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSC 188
R F+++ +P + T++ Y +K L L+ +M+R G + + + +K
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 189 IRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DT 244
+ + + ++ +DG D + L +M++ + + ++ VF EM
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 245 VAWNVMISCCVRNN-RTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERI 303
V++N +I + + S FD M++ S P + T N +E +
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADS--VSPSEFTYSILIDGYCKTNRVEKALLL 431
Query: 304 HNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTP----NKSVVSWSAMISGLAV 359
+ E+G+ SLI + + A E+F N S ++ MI
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 360 NGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIH 419
G EA++ F EM+ G PD + ++S +G+++E S +M E G +I+
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM-EENGCRADIN 550
Query: 420 HYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERL 476
+ +++ R G+ +A E+ T+ +KPD + TLLG H + E +
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGC---FAHAGMFEEAARMM 607
Query: 477 IELK 480
E+K
Sbjct: 608 REMK 611
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 135/327 (41%), Gaps = 41/327 (12%)
Query: 250 MISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIME 309
++ R ALS+F Q+ KC+P T E ++ +
Sbjct: 168 LVKALGRAKMVSKALSVF--YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 310 RG--YGGAINLSNSLIAMYSRCGCLDKAYEVF------MGTPNKSVVSWSAMISGLAVNG 361
G + I S +LI+ Y + G D A +F P + + ++ ++ G
Sbjct: 226 EGDCFPDTITYS-ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI--YTTLLGIYFKVG 282
Query: 362 YGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHY 421
++A++ FEEM+R G P T+T ++ +G VDE F+ M+ + G+TP++
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFL 341
Query: 422 GCMVDLLGRAGLLDKAYEVITTMAV-KPDPTI--WRTLLGAC-RIHGHVTLGERVIERLI 477
++++LG+ G +++ V + M + + PT+ + T++ A HV+ V
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS---EVSSWFD 398
Query: 478 ELKAQEAG----DYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPG--CCTIELKGVVH 531
++KA Y +L++ Y EK + M EK P C I G
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG--- 455
Query: 532 EFVVDDVSHKRKGEIYETLDDINKQLK 558
K + YE +++ K+LK
Sbjct: 456 -----------KAKRYEAANELFKELK 471
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 180/424 (42%), Gaps = 35/424 (8%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKS-CIRFLDIVGGV 198
+P V FN +I AY ++ LY + + + +K+ C+ L +
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL--IERA 209
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLYSQC---RKG--DDACKVFDEMPQRD-----TVAWN 248
+V ++ H S + V + Y + RKG ++A VF M +RD T +N
Sbjct: 210 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM-KRDRCKPTTETYN 268
Query: 249 VMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIM 308
+MI+ + +++ + L+ M+S ++C+P+ T E E I +
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRS--HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 326
Query: 309 ERGYGGAINLSNSLIAMYSRCGCLDKAYEVF-----MG-TPNKSVVSWSAMISGLAVNGY 362
E G + + N+L+ YSR G A E+F MG P+++ S++ M+ G
Sbjct: 327 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGL 384
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYG 422
+A FEEM+R+GI P ++ +LSA S + V + + M E G+ P+
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM-SENGVEPDTFVLN 443
Query: 423 CMVDLLGRAGLLDKAYEVITTMAVKP---DPTIWRTLLGACRIHGHVTLGERVIERLIEL 479
M++L GR G K +++ M P D + + L+ I+G ER+ E +EL
Sbjct: 444 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN---IYGKAGFLERIEELFVEL 500
Query: 480 KAQ----EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEFVV 535
K + + + + YS + K EV M + G + L E V
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 560
Query: 536 DDVS 539
+ V+
Sbjct: 561 EQVT 564
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 120/310 (38%), Gaps = 41/310 (13%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
+P +N MI Y + LY +MR N + + V + R +
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTVAWNVMISCCV 255
+ + +DG + D + A+M+ YS+ A ++F M + D ++N+M+
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 256 RNNRTRDALSLFDVMQST-------------SNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
R DA ++F+ M+ S + DVT N +E
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 303 IHNYI-------------------MERGYGGA-INLSNSLIAMYSRCGCLDKAYEVFMGT 342
+ N + ME G A I+ N LI +Y + G L++ E+F+
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 343 PNKS----VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLV 398
K+ VV+W++ I + + +E FEEM G PD T +LSACS V
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 560
Query: 399 DEGMSFFDRM 408
++ S M
Sbjct: 561 EQVTSVLRTM 570
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 155/387 (40%), Gaps = 61/387 (15%)
Query: 134 FFEQIN---RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
FFE +P ++ +I A+ + + + L DM R IA + + + + +C
Sbjct: 166 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 225
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTVA 246
+ ++V + +G D + V+ Y R+ A F+ M + DT
Sbjct: 226 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 285
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
+N++I C + ++ AL LF+ M+ +C PD VT +E +
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 307 IMERGYGGAINLSNSLIAMYSRCG-------------------------CL--------- 332
++ G I N+L+ Y+ G CL
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 333 -DKAYEVFM------GTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTF 385
KA EVF+ PN VV+++A+I NG+ EA+E F +M++ GI+P+ +
Sbjct: 406 PGKAKEVFLMMRKERRKPN--VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463
Query: 386 TGVLSACSHSGL---VDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA---YE 439
+L+ACS S VD +S GI N Y + A L+KA Y+
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQSR----GINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 440 VITTMAVKPDPTIWRTLL-GACRIHGH 465
+ VK D + L+ G+CR+ +
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKY 546
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 148/372 (39%), Gaps = 26/372 (6%)
Query: 111 VSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMR 170
+ ++ LS++ S D S R RP V F +++ YS+ + ++ M
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 171 RRG-----IAANPLSSSFAVKSCI-RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYS 224
G ++ N L ++AV L ++G ++ ++G D + T +++ Y
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK------QNGIIPDVVSYTCLLNSYG 401
Query: 225 QCRKGDDACKVF----DEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPD 280
+ R+ A +VF E + + V +N +I N +A+ +F M+ K P+
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK--PN 459
Query: 281 DVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFM 340
V+ + + + RG NS I Y L+KA ++
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 341 GTPNKSV----VSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG 396
K V V+++ +ISG EAI +EM+ + I + ++ VL A S G
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 579
Query: 397 LVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIW 453
V E S F++M G P++ Y M+ + KA E+ M ++PD
Sbjct: 580 QVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIAC 638
Query: 454 RTLLGACRIHGH 465
L+ A G
Sbjct: 639 SALMRAFNKGGQ 650
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 17/279 (6%)
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
+N+MI R+N A LF MQ S C+PD T + + +
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWS--CKPDAETYDALINAHGRAGQWRWAMNLMDD 203
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSV----VSWSAMISGLAVNGY 362
++ + + N+LI G +A EV + V V+ + ++S
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFG-ITPNIHHY 421
+A+ FE M+ +RPD TF ++ S G + + F+ M + P++ +
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 422 GCMVDLLGRAGLLDK---AYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE 478
++ L G ++ +E + +KP+ + L+GA +HG + + L +
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG---MSGTALSVLGD 380
Query: 479 LKAQ----EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEK 513
+K + Y LLN Y + K EV +M+++
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 158/350 (45%), Gaps = 24/350 (6%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
+P + +N +I + + ++++ R+GI N ++ + V +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCV 255
+ ++ K + + +A++D + + K +A ++F+EM + D V ++ +I+
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 256 RNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA 315
++R +A +FD+M S C D V+ +E G ++ + +RG
Sbjct: 307 LHDRIDEANQMFDLM--VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTP----NKSVVSWSAMISGLAVNGYGKEAIEAFE 371
N+LI + + G +DKA E F + + +++ ++ GL NG ++A+ FE
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
+MQ+ + D T+T V+ +G V+E S F + + G+ P+I Y M+ L
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMSGLCTK 483
Query: 432 GLLDKAYEVITTMA----VKPDPTIWRTLLGACRIHGHVTLGERVIERLI 477
GLL + + T M +K D T+ G +TL +I++++
Sbjct: 484 GLLHEVEALYTKMKQEGLMKNDCTLS---------DGDITLSAELIKKML 524
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 138/379 (36%), Gaps = 74/379 (19%)
Query: 208 GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM------PQRDTVAWNVMISCCVRNNRTR 261
G ++D V++ + C + A + +M P R T+ V C R NR
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFC--RRNRVS 172
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG-------YGG 314
DA+SL D M K PD V + I +G Y
Sbjct: 173 DAVSLVDKMVEIGYK--PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 315 AIN-LSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
+N L NS + +S L TPN V+++SA++ NG EA E FEEM
Sbjct: 231 LVNGLCNS--SRWSDAARLLSDMIKKKITPN--VITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMI------------------------ 409
R+ I PD T++ +++ +DE FD M+
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 410 ----------GEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTL 456
+ G+ N Y ++ +AG +DKA E + M + PD + L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 457 LGACRIHGHVTLGERVIERLIELKAQEAG-DYVLLLNIYSSAGHWEKVAEVRTLMKEKAI 515
LG +G + E+ + +++ +E D V + KV E +L
Sbjct: 407 LGGLCDNGEL---EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF----- 458
Query: 516 QTTPGCCTIELKGVVHEFV 534
C++ LKG+ + V
Sbjct: 459 ------CSLSLKGLKPDIV 471
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 149/330 (45%), Gaps = 14/330 (4%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V +NT+I A + L L+ +M +GI N ++ + ++ + ++
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVR 256
++ + + + +A++D + + K +A K++DEM +R D ++ +I+
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
++R +A +F++M S C P+ VT ++ G + + +RG G
Sbjct: 374 HDRLDEAKHMFELM--ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVV----SWSAMISGLAVNGYGKEAIEAFEE 372
+LI + + D A VF + V+ ++S ++ GL NG + A+ FE
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
+QR + PD T+ ++ +G V++G F + + G+ PN+ Y M+ R G
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKG 550
Query: 433 LLDKAYEVITTMAVK---PDPTIWRTLLGA 459
L ++A + M + PD + TL+ A
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRA 580
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 155/387 (40%), Gaps = 61/387 (15%)
Query: 134 FFEQIN---RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIR 190
FFE +P ++ +I A+ + + + L DM R IA + + + + +C
Sbjct: 34 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 93
Query: 191 FLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTVA 246
+ ++V + +G D + V+ Y R+ A F+ M + DT
Sbjct: 94 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 153
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
+N++I C + ++ AL LF+ M+ +C PD VT +E +
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 307 IMERGYGGAINLSNSLIAMYSRCG-------------------------CL--------- 332
++ G I N+L+ Y+ G CL
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 333 -DKAYEVFM------GTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTF 385
KA EVF+ PN VV+++A+I NG+ EA+E F +M++ GI+P+ +
Sbjct: 274 PGKAKEVFLMMRKERRKPN--VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 331
Query: 386 TGVLSACSHSGL---VDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA---YE 439
+L+ACS S VD +S GI N Y + A L+KA Y+
Sbjct: 332 CTLLAACSRSKKKVNVDTVLSAAQSR----GINLNTAAYNSAIGSYINAAELEKAIALYQ 387
Query: 440 VITTMAVKPDPTIWRTLL-GACRIHGH 465
+ VK D + L+ G+CR+ +
Sbjct: 388 SMRKKKVKADSVTFTILISGSCRMSKY 414
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 148/372 (39%), Gaps = 26/372 (6%)
Query: 111 VSLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMR 170
+ ++ LS++ S D S R RP V F +++ YS+ + ++ M
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 171 RRG-----IAANPLSSSFAVKSCI-RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYS 224
G ++ N L ++AV L ++G ++ ++G D + T +++ Y
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK------QNGIIPDVVSYTCLLNSYG 269
Query: 225 QCRKGDDACKVF----DEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPD 280
+ R+ A +VF E + + V +N +I N +A+ +F M+ K P+
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK--PN 327
Query: 281 DVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFM 340
V+ + + + RG NS I Y L+KA ++
Sbjct: 328 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 387
Query: 341 GTPNKSV----VSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG 396
K V V+++ +ISG EAI +EM+ + I + ++ VL A S G
Sbjct: 388 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 447
Query: 397 LVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIW 453
V E S F++M G P++ Y M+ + KA E+ M ++PD
Sbjct: 448 QVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIAC 506
Query: 454 RTLLGACRIHGH 465
L+ A G
Sbjct: 507 SALMRAFNKGGQ 518
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 17/279 (6%)
Query: 247 WNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNY 306
+N+MI R+N A LF MQ S C+PD T + + +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWS--CKPDAETYDALINAHGRAGQWRWAMNLMDD 71
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSV----VSWSAMISGLAVNGY 362
++ + + N+LI G +A EV + V V+ + ++S
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFG-ITPNIHHY 421
+A+ FE M+ +RPD TF ++ S G + + F+ M + P++ +
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 422 GCMVDLLGRAGLLDK---AYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIE 478
++ L G ++ +E + +KP+ + L+GA +HG + + L +
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG---MSGTALSVLGD 248
Query: 479 LKAQ----EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEK 513
+K + Y LLN Y + K EV +M+++
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 137/307 (44%), Gaps = 16/307 (5%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
RP V +NT+I + L+ M R G+ A+ ++ + S + L G
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN----SLVAGLCCSGRWS 226
Query: 200 VHCNVFKDGHQSD----SLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMI 251
+ +D D + TAV+D++ + K +A K+++EM +R D +N +I
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 252 SCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERG 311
+ + R +A + D+M + C PD VT ++ G ++ + +RG
Sbjct: 287 NGLCMHGRVDEAKQMLDLM--VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 312 YGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK-SVVSWSAMISGLAVNGYGKEAIEAF 370
G N++I Y + G D A E+F ++ ++ ++S ++ GL +N ++A+ F
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
E MQ+ I D T+ V+ G V++ F R + G+ P++ Y M+ R
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF-RSLSCKGLKPDVVSYTTMISGFCR 463
Query: 431 AGLLDKA 437
DK+
Sbjct: 464 KRQWDKS 470
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 151/351 (43%), Gaps = 15/351 (4%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P + F+ ++ + S + + L+ M GI + S + + R V + V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVR 256
+ K G++ D + ++++++ + Q + DA + +M + D V +N +I +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
DA+ LFD M+ + D VT R+ ++ R +
Sbjct: 187 IGLVNDAVELFDRMER--DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAVNGYGKEAIEAFEE 372
++I ++ + G +A +++ + V +++++I+GL ++G EA + +
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M G PD T+ +++ S VDEG F R + + G+ + Y ++ +AG
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF-REMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 433 LLDKAYEVITTMAVKPDPTIWRTLL-GAC---RIHGHVTLGERVIERLIEL 479
D A E+ + M +P+ + LL G C R+ + L E + + IEL
Sbjct: 364 RPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 148/326 (45%), Gaps = 16/326 (4%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+ T+I A + L L+ +M +GI N ++ + ++ + ++ ++
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTR 261
+ + + +A++D + + K +A K++DEM +R D ++ +I+ ++R
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
+A +F++M S C P+ VT +E G + + +RG G N+
Sbjct: 378 EAKHMFELM--ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 322 LIAMYSRCGCLDKAYEVFM-----GTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRI 376
LI + G D A ++F G P ++++S ++ GL G ++A+ FE +Q+
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVP-PDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 377 GIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDK 436
+ PD T+ ++ +G V++G F + + G+ PN+ Y M+ R GL ++
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEE 553
Query: 437 AYEVITTM---AVKPDPTIWRTLLGA 459
A + M P+ + TL+ A
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 16/265 (6%)
Query: 228 KGDDACKVFDEM----PQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVT 283
K DDA +F EM P V +N ++S + N+ +SL + MQ+ + D +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL--RISYDLYS 117
Query: 284 XXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAY----EVF 339
+ L + +M+ GY I +SL+ Y + +A ++F
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 340 MGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVD 399
+ + V+++ +I GL ++ EA+ + M G +PD T+ V++ G +D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 400 EGMSFFDRMIGEFG-ITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRT 455
+S +M E G I ++ Y ++D L ++ A + T M ++P+ + +
Sbjct: 238 LALSLLKKM--EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 456 LLGACRIHGHVTLGERVIERLIELK 480
L+ +G + R++ +IE K
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERK 320
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 119/264 (45%), Gaps = 15/264 (5%)
Query: 210 QSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTRDALS 265
++D ++ + V+D + R DDA +F EM + D ++ +ISC R DA
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 266 LFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAM 325
L M K P+ VT L E++ + +++R I NSLI
Sbjct: 297 LLSDM--LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING 354
Query: 326 YSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPD 381
+ LD+A ++F +K VV+++ +I+G + +E F +M R G+ +
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Query: 382 DQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA---Y 438
T+T ++ + D F +M+ + G+ PNI Y ++D L + G L+KA +
Sbjct: 415 TVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 439 EVITTMAVKPDPTIWRTLL-GACR 461
E + ++PD + + G C+
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCK 497
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 18/311 (5%)
Query: 162 GLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMD 221
L L+ +M +GI + + S + + ++ ++ + + + +++D
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 222 LYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKC 277
+++ K +A K+FDEM QR + V +N +I+ ++R +A +F +M S C
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM--VSKDC 376
Query: 278 EPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYE 337
PD VT + G + + RG G +LI + + D A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 338 VFMGT------PNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA 391
VF PN +++++ ++ GL NG ++A+ FE +Q+ + PD T+ +
Sbjct: 437 VFKQMVSDGVHPN--IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 392 CSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVK---P 448
+G V++G F + + G+ P++ Y M+ + GL ++AY + M P
Sbjct: 495 MCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 449 DPTIWRTLLGA 459
D + TL+ A
Sbjct: 554 DSGTYNTLIRA 564
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 346 SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
S+V+ +++++G EA+ ++M +G +PD TFT ++ E ++
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRI 462
+RM+ + G P++ YG +++ L + G D A ++ M ++ D I+ T++ +
Sbjct: 194 ERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 463 HGHVTLGERVIERLIELKAQ----EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQ 516
+ HV + + E+ + + Y L++ + G W + + + M E+ I
Sbjct: 253 YRHV---DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 14/246 (5%)
Query: 232 ACKVFDEMPQR----DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXX 287
A K+ DEM R D V +NV+++ + R +A+ + M S+ C+P+ +T
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG--CQPNVITHNII 315
Query: 288 XXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSV 347
E++ ++ +G+ ++ N LI R G L +A ++ P
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 348 ----VSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMS 403
+S++ ++ G AIE E M G PD T+ +L+A G V++ +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 404 FFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMA---VKPDPTIWRTLLGAC 460
+++ + G +P + Y ++D L +AG KA +++ M +KPD + +L+G
Sbjct: 436 ILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 461 RIHGHV 466
G V
Sbjct: 495 SREGKV 500
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 133/317 (41%), Gaps = 15/317 (4%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V +N ++ + + DM G N ++ + ++S + ++
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKG--DDACKVFDEMPQR----DTVAWNVMISCC 254
++ + G + +++ CRKG A + ++MPQ +++++N ++
Sbjct: 332 LADMLRKGFSPSVVTFNILINFL--CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
+ + A+ + M S C PD VT +E I N + +G
Sbjct: 390 CKEKKMDRAIEYLERM--VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 315 AINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSV----VSWSAMISGLAVNGYGKEAIEAF 370
+ N++I ++ G KA ++ K + +++S+++ GL+ G EAI+ F
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
E +R+GIRP+ TF ++ S D + F MI G PN Y +++ L
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAY 566
Query: 431 AGLLDKAYEVITTMAVK 447
G+ +A E++ + K
Sbjct: 567 EGMAKEALELLNELCNK 583
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 167/403 (41%), Gaps = 39/403 (9%)
Query: 175 AANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACK 234
A + S+ ++ +R ++ G + N+ G+ D + T ++ + + K A K
Sbjct: 99 ALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAK 158
Query: 235 VFDEMPQR----DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXX 290
+ + + D + +NVMIS + +ALS+ D M + PD VT
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS-----PDVVTYNTILRS 213
Query: 291 XXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS---- 346
L+ + + +++R + LI R + A ++ ++
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 347 VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVL-SACSHSGLVDEGMSFF 405
VV+++ +++G+ G EAI+ +M G +P+ T +L S CS +D
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLL-GACR 461
D + G +P++ + +++ L R GLL +A +++ M +P+ + LL G C+
Sbjct: 334 DML--RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 462 IHGHVTLGERVIERLIELKAQ----EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQT 517
+R IE L + ++ + Y +L G E E+ + K
Sbjct: 392 EKKM----DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK---- 443
Query: 518 TPGCCTIELKGVVHEFVVDDVSHKRK-GEIYETLDDIN-KQLK 558
GC + + + V+D ++ K G+ + LD++ K LK
Sbjct: 444 --GCSPVL---ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 182/448 (40%), Gaps = 56/448 (12%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
RP + F+ + + + L L + M +GIA N + S + C R +
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKG--DDACKVFD---EMPQRDT-VAWNVMISC 253
+ K G++ D++ + +++ C +G +A ++ D EM + T + N +++
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLIN--GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Query: 254 CVRNNRTRDALSLFDVMQSTS---------------------------------NKCEPD 280
N + DA+ L D M T K + D
Sbjct: 187 LCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 281 DVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFM 340
V SL+ + N + +G+ I + +LI + G D ++
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 341 G------TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
TP+ VV++SA+I G +EA E +EM + GI PD T+T ++
Sbjct: 307 DMIKRKITPD--VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVK---PDPT 451
+D+ D M+ + G PNI + +++ +A L+D E+ M+++ D
Sbjct: 365 ENQLDKANHMLDLMVSK-GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 452 IWRTLL-GACRIHGHVTLGERVIERLIELKAQ-EAGDYVLLLNIYSSAGHWEKVAEVRTL 509
+ TL+ G C + G + + + + + ++ + + + Y +LL+ G EK E+
Sbjct: 424 TYNTLIQGFCEL-GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 510 MKEKAIQTTPGCCTIELKGVVHEFVVDD 537
+++ ++ G I + G+ + VDD
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDD 510
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/453 (18%), Positives = 172/453 (37%), Gaps = 74/453 (16%)
Query: 75 SHKEQVISTIKSVSQKPHLLQIHAHIVCTTLVHDPAVSLHFLSRVALSGPLQDPIYS-RR 133
S +++ + + KP L+ ++A ++ + L+G + D + R
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNA----------------LVNGLCLNGKVSDAVLLIDR 202
Query: 134 FFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLD 193
E +P + +++ S + L R M R I + + S + +
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK--- 259
Query: 194 IVGGVQVHCNVFKD----GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTV 245
G + N+F + G ++D ++ T ++ + + DD K+ +M +R D V
Sbjct: 260 -DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 246 AWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHN 305
A++ +I C V+ + R+A L M PD VT N L+ + +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEM--IQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 306 YIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVV----------------- 348
++ +G G I N LI Y + +D E+F + VV
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 349 ----------------------SWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFT 386
S+ ++ GL NG ++A+E FE++++ + D +
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 387 GVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAV 446
++ ++ VD+ F + + G+ P++ Y M+ L + G L +A + M
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 447 ---KPDPTIWRTLLGACRIHGHVTLGERVIERL 476
P+ + L+ A G T ++IE +
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 15/272 (5%)
Query: 217 TAVMDLYSQCRKGDDACKVFDEM----PQRDTVAWNVMISCCVRNNRT-RDALSLFDVMQ 271
T ++ YS+ K + A +F+ M P V +NV++ + R+ R L + D M+
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 272 STSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC 331
S K D+ T L + + GY N+L+ ++ + G
Sbjct: 274 SKGLKF--DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 332 LDKAYEVFMGTPNKSV----VSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTG 387
+A V S V+++ +++ G+ KEA E M + G+ P+ T+T
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 388 VLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM--- 444
V+ A +G DE + F M E G PN Y ++ LLG+ ++ +++ M
Sbjct: 392 VIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450
Query: 445 AVKPDPTIWRTLLGACRIHGHVTLGERVIERL 476
P+ W T+L C G RV +
Sbjct: 451 GCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 147/371 (39%), Gaps = 41/371 (11%)
Query: 133 RFFEQINRPIVSHFNTMIRAY-SMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRF 191
R E P + +N ++ + M S +K L + +MR +G+ + + S + +C R
Sbjct: 235 RMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACARE 294
Query: 192 LDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAW 247
+ + + G++ ++ A++ ++ + +A V EM + D+V +
Sbjct: 295 GLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTY 354
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
N +++ VR +++A + ++M T P+ +T + ++ +
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMM--TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 308 MERG-------YGGAINL------SNSLIAMY---SRCGCLDKAYEVFMGTPNKSVVSWS 351
E G Y ++L SN +I M GC +PN++ +W+
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC----------SPNRA--TWN 460
Query: 352 AMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGE 411
M++ G K F EM+ G PD TF ++SA G + + M
Sbjct: 461 TMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMT-R 519
Query: 412 FGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTL 468
G + Y +++ L R G VI+ M KP T + +L C G L
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML-QCYAKGGNYL 578
Query: 469 G-ERVIERLIE 478
G ER+ R+ E
Sbjct: 579 GIERIENRIKE 589
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 135/342 (39%), Gaps = 23/342 (6%)
Query: 119 VALSGPLQDPIYSRRFFEQIN----RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGI 174
+AL G + R F ++ P FNT+I AY S +Y +M R G
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 175 AANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACK 234
A + + + + R D G V ++ G + + ++ Y++ +
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 582
Query: 235 VFDEMPQRDTV-AWNVMISCCVRNNRTR------DALSLFDVMQSTSNKCEPDDVTXXXX 287
+ + + + +W ++ + + N + R A +LF + +PD V
Sbjct: 583 IENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK-----KHGYKPDMVIFNSM 637
Query: 288 XXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS- 346
N + E I I E G + NSL+ MY R G KA E+ + T KS
Sbjct: 638 LSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI-LKTLEKSQ 696
Query: 347 ----VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGM 402
+VS++ +I G G +EA+ EM GIRP T+ +S + G+ E
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIE 756
Query: 403 SFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM 444
+ M + PN + +VD RAG +A + ++ +
Sbjct: 757 DVIECM-AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 22/332 (6%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V +N++I Y L + DMR +G N S + V + I V
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVR 256
+ DG + +++ ++ + + + +A ++F EMP++ D +N +IS
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 257 NNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAI 316
+ + AL L M S + VT ++ ++ N ++ +G
Sbjct: 507 VDEIKHALWLLRDM--ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 317 NLSNSLIAMYSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAVNGYGKEAIEAFEE 372
NSLI R G +DKA +F S +S + +I+GL +G +EA+E +E
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 373 MQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAG 432
M G PD TF +++ +G +++G++ F ++ E GI P+ + ++ L + G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGG 683
Query: 433 -------LLDKAYEVITTMAVKPDPTIWRTLL 457
LLD+ E P+ W LL
Sbjct: 684 FVYDACLLLDEGIED----GFVPNHRTWSILL 711
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 138/336 (41%), Gaps = 25/336 (7%)
Query: 144 SHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVH-- 201
S F +++R Y + P + L +MR N S KS L+I+ H
Sbjct: 147 SLFISIMRDYDKAGFPGQTTRLMLEMR------NVYSCEPTFKSYNVVLEILVSGNCHKV 200
Query: 202 -CNVFKD--GHQSDSLLLT--AVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMIS 252
NVF D + L T VM + + D A + +M + ++V + +I
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 253 CCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGY 312
+ NR +AL L + M C PD T + + ++ N ++ RG+
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMG--CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 313 GGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEE 372
L+ + G +D A ++F P +V ++ +I G +G +A +
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 373 M-QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRA 431
M GI PD T+ ++ GLV + M + G PN++ Y +VD +
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKL 437
Query: 432 GLLDKAYEVITTMA---VKPDPTIWRTLLGA-CRIH 463
G +D+AY V+ M+ +KP+ + L+ A C+ H
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 158/358 (44%), Gaps = 20/358 (5%)
Query: 122 SGPLQDPIYSRRFFEQINR----PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAAN 177
SG LQ + S F + R P V F +I Y + + + LY++MRR ++ N
Sbjct: 176 SGELQLALKS---FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 178 PLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFD 237
++ + + + ++ +++ + +D + +SL+ T ++D + Q D+A K
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 238 EMPQR----DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXX 293
+M + D A+ V+IS N + ++A + + M+ + PD V
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD--LVPDMVIFTTMMNAYFK 350
Query: 294 XNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAM 353
++ +++ ++ERG+ + +++I ++ G L +A V+ + V ++ +
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEKANDVMYTVL 409
Query: 354 ISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSA-CSHSGLVDEGMSFFDRMIGEF 412
I L G E F ++ G+ PD +T ++ C LVD RM+ E
Sbjct: 410 IDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD-AFKLKTRMVQE- 467
Query: 413 GITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVT 467
G+ ++ Y ++ L GL+ +A +V M + PD ++ L+ A G++
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMA 525
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 153/391 (39%), Gaps = 49/391 (12%)
Query: 112 SLHFLSRVALSGPLQDPIYSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRR 171
+L FLSR+ S L DP + Q+ + AY +S
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVS--------------- 49
Query: 172 RGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF----KDGHQSDSLLLTAVMDLYSQCR 227
RG P SSF S + F+ +G V+ ++ + G + D + +++D CR
Sbjct: 50 RGYT--PHRSSF--NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID--GHCR 103
Query: 228 KGD--DACKVFDEMP-------QRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
GD A V + + + D V++N + + + + VM C
Sbjct: 104 NGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC---CS 160
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEV 338
P+ VT L+ + + + + LI Y + G L+ A +
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 339 FMGTP----NKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
+ + +VV+++A+I G G + A E + M + P+ +T ++
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMA---VKPDPT 451
G D M F +M+ + G+ +I YG ++ L G L +A E++ M + PD
Sbjct: 281 RGDSDNAMKFLAKMLNQ-GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 452 IWRTLLGA----CRIHGHVTLGERVIERLIE 478
I+ T++ A R+ V + ++IER E
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 119/264 (45%), Gaps = 17/264 (6%)
Query: 226 CRKGDD--ACKVFDEMPQRDTVAWNVMISCCVRNNRTRD-----ALSLFDVMQSTSNKCE 278
C+ G+ A K F M +RD ++ NV+ C+ + + A+SL+ M+ +
Sbjct: 174 CKSGELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV--RMS 230
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEV 338
+ VT ++ E +++ ++E + ++I + + G D A +
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 290
Query: 339 FMGTPNKS----VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
N+ + ++ +ISGL NG KEA E E+M++ + PD FT +++A
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPTIWR 454
SG + ++ + ++I E G P++ M+D + + G L +A ++ K + ++
Sbjct: 351 SGRMKAAVNMYHKLI-ERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEKANDVMYT 407
Query: 455 TLLGACRIHGHVTLGERVIERLIE 478
L+ A G ER+ ++ E
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISE 431
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 171/413 (41%), Gaps = 57/413 (13%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLY-LYRDMRRRGIAANPLSSSFAVKSC-IRFLDIVGGV 198
P + +NT+I A + +GL L+ +MR GI + ++ + + +C IR L +
Sbjct: 209 PSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEM 268
Query: 199 QVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCC 254
V + G D + +++ + + R+ + C + EM D ++NV++
Sbjct: 269 -VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAY 327
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
++ ++A+ +F MQ+ C P+
Sbjct: 328 AKSGSIKEAMGVFHQMQAAG--CTPN---------------------------------- 351
Query: 315 AINLSNSLIAMYSRCGCLDKAYEVFM----GTPNKSVVSWSAMISGLAVNGYGKEAIEAF 370
N + L+ ++ + G D ++F+ + +++ +I GY KE + F
Sbjct: 352 -ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
+M I PD +T+ G++ AC GL ++ M I P+ Y +++ G+
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQ 469
Query: 431 AGLLDKAYEVITTM-AVKPDPTI--WRTLLGACRIHGHVTLGERVIERLIELKAQEAGD- 486
A L ++A TM V +P+I + +LL + G V E ++ RL++ D
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDT 529
Query: 487 YVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHEF--VVDD 537
+ + Y G +E+ V+T + + + P T+E V+ F +VD+
Sbjct: 530 FNAQIEAYKQGGKFEEA--VKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE 580
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 18/214 (8%)
Query: 322 LIAMYSRCGCLDKAYEVFMGTPN----KSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
+I++ R G LDK EVF P+ +SV S++A+I+ NG + ++E + M+
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 378 IRPDDQTFTGVLSACSHSGLVDEG-MSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDK 436
I P T+ V++AC+ GL EG + F M E GI P+I Y ++ GL D+
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACAIRGLGDE 265
Query: 437 AYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ----EAGDYVL 489
A V TM + PD T + L+ G + E+V + L E+ + + Y +
Sbjct: 266 AEMVFRTMNDGGIVPDLTTYSHLV---ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 490 LLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCT 523
LL Y+ +G ++ V M +A TP T
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQM--QAAGCTPNANT 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 130/316 (41%), Gaps = 19/316 (6%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVK---SCIRFLDIVGG 197
P ++ +N ++ AY+ S S ++ + ++ M+ G N + S + R+ D+
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR-- 372
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISC 253
Q+ + D+ +++++ + + +F +M + D + +I
Sbjct: 373 -QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
C + DA + M T+N P E N + E G
Sbjct: 432 CGKGGLHEDARKILQYM--TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFM-----GTPNKSVVSWSAMISGLAVNGYGKEAIE 368
+I +SL+ ++R G + ++ + G P ++ +++A I G +EA++
Sbjct: 490 PSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP-RNRDTFNAQIEAYKQGGKFEEAVK 548
Query: 369 AFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLL 428
+ +M++ PD++T VLS S + LVDE F+ M I P+I Y M+ +
Sbjct: 549 TYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKAS-DILPSIMCYCMMLAVY 607
Query: 429 GRAGLLDKAYEVITTM 444
G+ D E++ M
Sbjct: 608 GKTERWDDVNELLEEM 623
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 175/432 (40%), Gaps = 56/432 (12%)
Query: 132 RRFFEQINR----PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKS 187
++F+ ++ + P V F ++ A + + + MR +GI N + + +
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Query: 188 CIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----D 243
+R + +++ N+ G + + +D Y + A + F++M + +
Sbjct: 408 LLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Query: 244 TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERI 303
VA N + + R R+A +F ++ PD VT ++ ++
Sbjct: 468 IVACNASLYSLAKAGRDREAKQIFYGLKDIG--LVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 304 HNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK----SVVSWSAMISGLAV 359
+ +ME G + + NSLI + +D+A+++FM +VV+++ +++GL
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 360 NGYGKEAIEAFE-----------------------------------EMQRIGIRPDDQT 384
NG +EAIE FE +M +G PD T
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 645
Query: 385 FTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM 444
+ ++ +G V E M FF +M + + P+ ++ + +A L++ AY++IT
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQM--KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 445 ----AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGDYVLLLNIYSSAGHW 500
A +P W L+G+ + ERL+ GD +L+ I S H
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKH- 762
Query: 501 EKVAEVRTLMKE 512
V+ RTL ++
Sbjct: 763 NNVSGARTLFEK 774
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 117/259 (45%), Gaps = 14/259 (5%)
Query: 219 VMDLYSQCRKGDDACKVFDEMP----QRDTVAWNVMISCCVRNNRTRDALSLF-DVMQST 273
++D Y + K D+ +++ EM + +T+ N++IS V+ DAL L+ D+M +
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM--S 883
Query: 274 SNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLD 333
P T L +++ +++ G + N LI + + G D
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 334 KAYEVFMGTPNKSV----VSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVL 389
A +F + V ++S ++ L + G E + F+E++ G+ PD + ++
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 390 SACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA---YEVITTMAV 446
+ S ++E + F+ M GITP+++ Y ++ LG AG++++A Y I +
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 447 KPDPTIWRTLLGACRIHGH 465
+P+ + L+ + G
Sbjct: 1064 EPNVFTFNALIRGYSLSGK 1082
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 349 SWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM 408
S++ +I L + + EA+E + M G RP QT++ ++ +D M M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 409 IGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLLGACRIHGH 465
G+ PN++ + + +LGRAG +++AYE++ M PD + L+ A
Sbjct: 250 -ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 466 VTLGERVIERLIELKAQ-EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTTPGCCTI 524
+ + V E++ + + + Y+ LL+ +S + V + + M++ P T
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG--HVPDVVTF 366
Query: 525 ELKGVVHEFVVDDVSHKRK-GEIYETLDDINKQ 556
+ +VD + GE ++TLD + Q
Sbjct: 367 TI-------LVDALCKAGNFGEAFDTLDVMRDQ 392
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 28/273 (10%)
Query: 323 IAMYSRCGCLDKAYEVFMGTPNKS----VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGI 378
I + R G +++AYE+ ++ VV+++ +I L A E FE+M+
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 379 RPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAY 438
+PD T+ +L S + +D F+ M + G P++ + +VD L +AG +A+
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD-GHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 439 EVITTM---AVKPDPTIWRTLL-GACRIHGHVTLGERVIERLIELKAQ-EAGDYVLLLNI 493
+ + M + P+ + TL+ G R+H + + + L + A Y++ ++
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVH-RLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 494 YSSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGVVHE-----------------FVVD 536
Y +G E MK K I C L + V D
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 537 DVSHKRKGEIYETLDDINKQLKIAGYVVELSSE 569
V++ + Y + +I++ +K+ ++E E
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 123/291 (42%), Gaps = 13/291 (4%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V+ +N ++ AY S + LY++M AN ++ + + ++ ++ + +
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 201 HCNVFKDGHQSDSLLLTA-VMDLYSQCRKGDDACKVFDEMP----QRDTVAWNVMISCCV 255
+ ++ D S + ++D S+ + +A ++F+ M + + +N++I+
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 256 RNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA 315
+ A +LF M PD T ++ G + E G
Sbjct: 938 KAGEADAACALFKRM--VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 316 INLSNSLIAMYSRCGCLDKAYEVF--MGTP---NKSVVSWSAMISGLAVNGYGKEAIEAF 370
+ N +I + L++A +F M T + +++++I L + G +EA + +
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHY 421
E+QR G+ P+ TF ++ S SG + + + M+ G +PN Y
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG-GFSPNTGTY 1105
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 143/346 (41%), Gaps = 31/346 (8%)
Query: 134 FFEQINR----PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
FE++ R V + M+ ++ + ++ + +MR G N ++ + + + +
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEM------PQRD 243
+ + ++ + +G + + +A++D + + + + AC++F+ M P D
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 244 --------------TVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXX 289
V + ++ +++R +A L D M + CEP+ +
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM--SMEGCEPNQIVYDALID 682
Query: 290 XXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS--- 346
L+ + + + E G+ + +SLI Y + D A +V S
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 742
Query: 347 -VVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFF 405
VV ++ MI GL G EA + + M+ G +P+ T+T ++ G ++ +
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 406 DRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVKPDPT 451
+RM G G+ PN Y ++D + G LD A+ ++ M PT
Sbjct: 803 ERM-GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 18/192 (9%)
Query: 297 LEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGC----LDKAYEVFMGTPNKSVV---- 348
L+ E+ ++ ++ G + L+ ++ ++RC C +KA+ V + +
Sbjct: 429 LDLAEKAYSEMLAAG----VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 349 SWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRM 408
++S +++ L + A FEEM+R G+ D T+T ++ + +GL+++ +F+ M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 409 IGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVK---PDPTIWRTLL-GACRIHG 464
E G TPN+ Y ++ +A + A E+ TM + P+ + L+ G C+ G
Sbjct: 545 -REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK-AG 602
Query: 465 HVTLGERVIERL 476
V ++ ER+
Sbjct: 603 QVEKACQIFERM 614
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 133/299 (44%), Gaps = 19/299 (6%)
Query: 208 GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTVAWNVMISCCVRNNRTRDA 263
G + D T ++ + ++ K+ DEM Q +TV +N +I R N +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLI 323
+++F+ MQ C+PD VT L+ ++ + G + +I
Sbjct: 419 MNVFNQMQEAG--CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 324 AMYSRCGCLDKAYEVFMG------TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
+ G L A+++F TPN +V+++ M+ A + A++ + +MQ G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPN--LVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA 437
PD T++ V+ H G ++E + F M + I P+ YG +VDL G+AG ++KA
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKA 593
Query: 438 YEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEA-GDYVLLLN 492
++ M ++P+ +LL + +++ ++ L + + Y LLL+
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 125/286 (43%), Gaps = 19/286 (6%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLS--SSFAVKSCIRFLDIVGG 197
+P +N +I +Y ++ + + ++ M+ G + ++ + + + FLDI
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA-- 453
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISC 253
+ ++ + G D+ + +++ + A K+F EM + + V +N+M+
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+ ++AL L+ MQ+ EPD VT LE E + + ++ +
Sbjct: 514 HAKARNYQNALKLYRDMQNAG--FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGT------PNKSVVSWSAMISGLAVNGYGKEAI 367
+ L+ ++ + G ++KA++ + PN + S + + L VN EA
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN-SLLSTFLRVNKIA-EAY 629
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFG 413
E + M +G+RP QT+T +LS C+ G M F +++ G
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCT-DGRSKLDMGFCGQLMASTG 674
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
GAIN L+ R GC PN V+++ +I Y EA+ F +M
Sbjct: 381 GAIN---KLLDEMVRDGC----------QPN--TVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL 433
Q G +PD T+ ++ + +G +D M + RM G++P+ Y +++ LG+AG
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGH 484
Query: 434 LDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG----- 485
L A+++ M P+ + ++ +H + ++ ++ Q AG
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDM--QNAGFEPDK 539
Query: 486 -DYVLLLNIYSSAGHWEKVAEVRTLMKEK 513
Y +++ + G+ E+ V T M++K
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 133/299 (44%), Gaps = 19/299 (6%)
Query: 208 GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTVAWNVMISCCVRNNRTRDA 263
G + D T ++ + ++ K+ DEM Q +TV +N +I R N +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLI 323
+++F+ MQ C+PD VT L+ ++ + G + +I
Sbjct: 419 MNVFNQMQEAG--CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 324 AMYSRCGCLDKAYEVFMG------TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
+ G L A+++F TPN +V+++ M+ A + A++ + +MQ G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPN--LVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA 437
PD T++ V+ H G ++E + F M + I P+ YG +VDL G+AG ++KA
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKA 593
Query: 438 YEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEA-GDYVLLLN 492
++ M ++P+ +LL + +++ ++ L + + Y LLL+
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 125/286 (43%), Gaps = 19/286 (6%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLS--SSFAVKSCIRFLDIVGG 197
+P +N +I +Y ++ + + ++ M+ G + ++ + + + FLDI
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA-- 453
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISC 253
+ ++ + G D+ + +++ + A K+F EM + + V +N+M+
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+ ++AL L+ MQ+ EPD VT LE E + + ++ +
Sbjct: 514 HAKARNYQNALKLYRDMQNAG--FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGT------PNKSVVSWSAMISGLAVNGYGKEAI 367
+ L+ ++ + G ++KA++ + PN + S + + L VN EA
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN-SLLSTFLRVNKIA-EAY 629
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFG 413
E + M +G+RP QT+T +LS C+ G M F +++ G
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCT-DGRSKLDMGFCGQLMASTG 674
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
GAIN L+ R GC PN V+++ +I Y EA+ F +M
Sbjct: 381 GAIN---KLLDEMVRDGC----------QPN--TVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL 433
Q G +PD T+ ++ + +G +D M + RM G++P+ Y +++ LG+AG
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGH 484
Query: 434 LDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG----- 485
L A+++ M P+ + ++ +H + ++ ++ Q AG
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDM--QNAGFEPDK 539
Query: 486 -DYVLLLNIYSSAGHWEKVAEVRTLMKEK 513
Y +++ + G+ E+ V T M++K
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 133/299 (44%), Gaps = 19/299 (6%)
Query: 208 GHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMP----QRDTVAWNVMISCCVRNNRTRDA 263
G + D T ++ + ++ K+ DEM Q +TV +N +I R N +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 264 LSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLI 323
+++F+ MQ C+PD VT L+ ++ + G + +I
Sbjct: 419 MNVFNQMQEAG--CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 324 AMYSRCGCLDKAYEVFMG------TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
+ G L A+++F TPN +V+++ M+ A + A++ + +MQ G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPN--LVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA 437
PD T++ V+ H G ++E + F M + I P+ YG +VDL G+AG ++KA
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKA 593
Query: 438 YEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEA-GDYVLLLN 492
++ M ++P+ +LL + +++ ++ L + + Y LLL+
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 125/286 (43%), Gaps = 19/286 (6%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLS--SSFAVKSCIRFLDIVGG 197
+P +N +I +Y ++ + + ++ M+ G + ++ + + + FLDI
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA-- 453
Query: 198 VQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISC 253
+ ++ + G D+ + +++ + A K+F EM + + V +N+M+
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+ ++AL L+ MQ+ EPD VT LE E + + ++ +
Sbjct: 514 HAKARNYQNALKLYRDMQNAG--FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGT------PNKSVVSWSAMISGLAVNGYGKEAI 367
+ L+ ++ + G ++KA++ + PN + S + + L VN EA
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN-SLLSTFLRVNKIA-EAY 629
Query: 368 EAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFG 413
E + M +G+RP QT+T +LS C+ G M F +++ G
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCT-DGRSKLDMGFCGQLMASTG 674
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEM 373
GAIN L+ R GC PN V+++ +I Y EA+ F +M
Sbjct: 381 GAIN---KLLDEMVRDGC----------QPN--TVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 374 QRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGL 433
Q G +PD T+ ++ + +G +D M + RM G++P+ Y +++ LG+AG
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGH 484
Query: 434 LDKAYEVITTM---AVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAG----- 485
L A+++ M P+ + ++ +H + ++ ++ Q AG
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDM--QNAGFEPDK 539
Query: 486 -DYVLLLNIYSSAGHWEKVAEVRTLMKEK 513
Y +++ + G+ E+ V T M++K
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 141/335 (42%), Gaps = 21/335 (6%)
Query: 209 HQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQRDTV----AWNVMISCCVRNNRTRDAL 264
H S S+L ++D+ + R+ ++ +VFDEM +RD + V+++ ++ +A+
Sbjct: 139 HLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAV 198
Query: 265 SLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIA 324
+F+ + + D V +EF E + R +G I N ++
Sbjct: 199 GVFERRKEFG--IDDDLVAFHGLLMWLCRYKHVEFAETLF-CSRRREFGCDIKAMNMILN 255
Query: 325 MYSRCGCLDKA----YEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRP 380
+ G + +A ++ VVS+ MI+ L G +A+E + M P
Sbjct: 256 GWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNP 315
Query: 381 DDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEV 440
D + V+ A + E + F R I E G PN+ Y ++ L + +K +E+
Sbjct: 316 DVKICNNVIDALCFKKRIPEALEVF-REISEKGPDPNVVTYNSLLKHLCKIRRTEKVWEL 374
Query: 441 ITTMAVK-----PDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQEAGD-YVLLLNIY 494
+ M +K P+ + LL + V + V+ER+ + K + D Y L+ +Y
Sbjct: 375 VEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLYNLMFRLY 431
Query: 495 SSAGHWEKVAEVRTLMKEKAIQTTPGCCTIELKGV 529
EKV E+ + M+ + TI + G+
Sbjct: 432 VQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGL 466
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 16/276 (5%)
Query: 130 YSRRFFEQINRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCI 189
Y +Q P +NT+I M + + L R++R +GI + ++ + +
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 190 RFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQCRKGD--DACKVFDEMPQR----D 243
+ D +H + DG Q T++ +Y CRK +A ++F+++ + D
Sbjct: 409 QHGDAKKAFALHDEMMTDGIQPTQFTYTSL--IYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 244 TVAWNVMISC-CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGER 302
V N ++ C N R A SL M S PDDVT E
Sbjct: 467 LVMMNTLMDGHCAIGNMDR-AFSLLKEMDMMS--INPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 303 IHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAY----EVFMGTPNKSVVSWSAMISGLA 358
+ + RG N+LI+ YS+ G A+ E+ N ++++++A++ GL+
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583
Query: 359 VNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
N G+ A E EM+ GI P+D +F V+ A S+
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 121/286 (42%), Gaps = 11/286 (3%)
Query: 167 RDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYSQC 226
R+M+ G+ + +S + ++ C D+ + K G ++
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 227 RKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDV 282
K + A + E+ ++ D+V +N++I+ ++ + A +L D M + + +P
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMT--DGIQPTQF 433
Query: 283 TXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAY----EV 338
T N + + ++ +G + + N+L+ + G +D+A+ E+
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 339 FMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLV 398
M + N V+++ ++ GL G +EA E EM+R GI+PD ++ ++S S G
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 399 DEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM 444
D M+ G P + Y ++ L + + A E++ M
Sbjct: 554 KHAFMVRDEMLS-LGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 120/299 (40%), Gaps = 18/299 (6%)
Query: 230 DDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXX 289
D+ D + + T+ +++++ CC + +A+ F +M+ P T
Sbjct: 141 DELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKG--FYPKTETCNHILT 198
Query: 290 XXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKA------YEVFMGTP 343
N +E + + + N +I + + G L KA EVF P
Sbjct: 199 LLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKP 258
Query: 344 NKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMS 403
++V+++ ++ G ++ G + A EM+ G +PD QT+ +LS + G E +
Sbjct: 259 --TIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL- 315
Query: 404 FFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAY---EVITTMAVKPDPTIWRTLLGAC 460
R + E G+ P+ Y ++ G L+ A+ + + + P + TL+
Sbjct: 316 ---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
Query: 461 RIHGHVTLGERVIERLIELK-AQEAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQTT 518
+ + E +I + E ++ Y +L+N Y G +K + M IQ T
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 140/312 (44%), Gaps = 32/312 (10%)
Query: 244 TVAWNVMISCCVRNNRTRDA---------------LSLFDVMQSTSNKCEPDDVTXXXXX 288
+++ + MI VR+ R DA L + + + ST + C +D
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLI 172
Query: 289 XXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNK--- 345
L + +G+ +I+ N+LI R G ++ A+ V+
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 346 -SVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSF 404
+V + + M++ L +G ++ ++Q G+ PD T+ ++SA S GL++E
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 405 FDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM---AVKPDPTIWRTLL-GAC 460
+ M G+ G +P ++ Y +++ L + G ++A EV M + PD T +R+LL AC
Sbjct: 293 MNAMPGK-GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 461 RIHGHVTLGERVIERLIELKAQE-AGDYVL---LLNIYSSAGHWEKVAEVRTLMKEKAIQ 516
+ G V E+V ++++++ D V ++++++ +G+ +K +KE +
Sbjct: 352 K-KGDVVETEKVFS---DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 517 TTPGCCTIELKG 528
TI ++G
Sbjct: 408 PDNVIYTILIQG 419
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 307 IMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS----VVSWSAMISGLAVNGY 362
+ E+G I N+LI+ YS G +++A+E+ P K V +++ +I+GL +G
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 363 GKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYG 422
+ A E F EM R G+ PD T+ +L G V E F M + P++ +
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR-DVVPDLVCFS 379
Query: 423 CMVDLLGRAGLLDKA---YEVITTMAVKPDPTIWRTLL-GACR 461
M+ L R+G LDKA + + + PD I+ L+ G CR
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 143/330 (43%), Gaps = 22/330 (6%)
Query: 165 LYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVFKDGHQSDSLLLTAVMDLYS 224
++ DMR R + + + S + R ++ + +V + G D+++ T ++ Y
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY- 420
Query: 225 QCRKG--DDACKVFDEMPQR----DTVAWNVMISCCVRNNRTRDALSLFDVMQSTSNKCE 278
CRKG A + +EM Q+ D V +N ++ + +A LF+ M T
Sbjct: 421 -CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM--TERALF 477
Query: 279 PDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEV 338
PD T +L+ + + E+ + N+L+ + + G +D A E+
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 339 FMGTPNKSV----VSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSH 394
+ +K + +S+S +++ L G+ EA ++EM I+P ++
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 395 SGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTM-----AVKPD 449
SG +G SF ++MI E G P+ Y ++ R + KA+ ++ M + PD
Sbjct: 598 SGNASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 450 PTIWRTLL-GACRIHGHVTLGERVIERLIE 478
+ ++L G CR + E V+ ++IE
Sbjct: 657 VFTYNSILHGFCR-QNQMKEAEVVLRKMIE 685
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 134/346 (38%), Gaps = 45/346 (13%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P + +NT+I AYS ++ L M +G + + + + + +V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 201 HCNVFKDGHQSDSLLLTAVMDLYSQCRKGD--DACKVFDEMPQRDT----VAWNVMISCC 254
+ + G DS ++ L C+KGD + KVF +M RD V ++ M+S
Sbjct: 328 FAEMLRSGLSPDSTTYRSL--LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 255 VRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGG 314
R+ AL F+ ++ PD+V I Y +
Sbjct: 386 TRSGNLDKALMYFNSVKEAG--LIPDNVIYTIL---------------IQGYCRKGMISV 428
Query: 315 AINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQ 374
A+NL N ++ GC VV+++ ++ GL EA + F EM
Sbjct: 429 AMNLRNEMLQQ----GCA------------MDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 375 RIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLL 434
+ PD T T ++ G + M F +M E I ++ Y ++D G+ G +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 435 DKAYEVITTMAVK---PDPTIWRTLLGACRIHGHVTLGERVIERLI 477
D A E+ M K P P + L+ A GH+ RV + +I
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 146/354 (41%), Gaps = 21/354 (5%)
Query: 140 RPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQ 199
+P V ++ +I YL+ +M +GIA N + + + F +
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 200 VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCV 255
+ ++ + D L A++ + K +A K+ DEM R DTV +N MI
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 256 RNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGA 315
++NR DA +FD+M S PD VT ++ G ++ I RG
Sbjct: 413 KHNRFDDAKHMFDLMAS------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 316 INLSNSLIAMYSRCGCLDKAYEVFMGTPNKSV----VSWSAMISGLAVNGYGKEAIEAFE 371
N+LI + L+ A ++F + V ++ + ++ G N +EA+E FE
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 372 EMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVD-LLGR 430
+Q I D + ++ VDE F + G+ P++ Y M+ G+
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH-GVEPDVQTYNVMISGFCGK 585
Query: 431 AGLLDK--AYEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERLIELKAQ 482
+ + D + + +PD + + TL+ C G + ++ IE + E+++
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI---DKSIELISEMRSN 636
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 168/394 (42%), Gaps = 25/394 (6%)
Query: 139 NRPIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGV 198
R V +N MI+AY + +K L L++ M+ +G + + + ++ + +D+V
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYN-SLFQMLAGVDLVDEA 569
Query: 199 Q-VHCNVFKDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISC 253
Q + + G + A++ Y + DA +++ M + + V + +I+
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 254 CVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYG 313
+ +A+ F +M+ + + + + LE R+++ + + G
Sbjct: 630 FAESGMVEEAIQYFRMMEE--HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGG 687
Query: 314 GAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKS---VVSWSAMISGLAVNGYGKEAIEAF 370
+ SNS++++ + G + +A +F K V+S++ M+ G EAIE
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVA 747
Query: 371 EEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGR 430
EEM+ G+ D +F V++ + G + E F M+ E + + + + LL +
Sbjct: 748 EEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKK 807
Query: 431 AGLLDKAYEVITTM--AVKP--DPTIWRTLLGACRIHGHVTLGERVIERLIELKA----Q 482
G+ +A + T KP P I TL A ++ + +E EL + +
Sbjct: 808 GGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAY------ALESCQELTSGEIPR 861
Query: 483 EAGDYVLLLNIYSSAGHWEKVAEVRTLMKEKAIQ 516
E Y ++ YS++G + + M+EK ++
Sbjct: 862 EHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLE 895
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 16/264 (6%)
Query: 197 GVQVHCNVFKDGHQSDSLL----LTAVMDLYSQCRKGDDACKVF----DEMPQR-DTVAW 247
G+ V + Q D +L L AV+D+Y++ +A VF + QR D + +
Sbjct: 459 GLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEY 518
Query: 248 NVMISCCVRNNRTRDALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYI 307
NVMI + ALSLF M++ PD+ T + ++ +RI +
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTW--PDECTYNSLFQMLAGVDLVDEAQRILAEM 576
Query: 308 MERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMGTPNKSV----VSWSAMISGLAVNGYG 363
++ G ++IA Y R G L A +++ V V + ++I+G A +G
Sbjct: 577 LDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMV 636
Query: 364 KEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGC 423
+EAI+ F M+ G++ + T ++ A S G ++E +D+M G P++
Sbjct: 637 EEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEG-GPDVAASNS 695
Query: 424 MVDLLGRAGLLDKAYEVITTMAVK 447
M+ L G++ +A + + K
Sbjct: 696 MLSLCADLGIVSEAESIFNALREK 719
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 16/204 (7%)
Query: 321 SLIAMYSRCGCLDKAYEVFMGTPNKS-----VVSWSAMISGLAVNGYGKEAIEAFEEMQR 375
++I +Y+ G +A VF G N S V+ ++ MI ++A+ F+ M+
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 376 IGIRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLD 435
G PD+ T+ + + LVDE M+ + G P Y M+ R GLL
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML-DSGCKPGCKTYAAMIASYVRLGLLS 602
Query: 436 KA---YEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIE--RLIELKAQEAGDYVL- 489
A YE + VKP+ ++ +L+ G V E I+ R++E ++ VL
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMV---EEAIQYFRMMEEHGVQSNHIVLT 659
Query: 490 -LLNIYSSAGHWEKVAEVRTLMKE 512
L+ YS G E+ V MK+
Sbjct: 660 SLIKAYSKVGCLEEARRVYDKMKD 683
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/446 (19%), Positives = 181/446 (40%), Gaps = 54/446 (12%)
Query: 141 PIVSHFNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQV 200
P V FN + A + + + L L + M +GIA + + S + R +
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 201 HCNVFKDGHQSDSLLLTAVMD-LYSQCRKGDDACKVFD---EMPQRDT-VAWNVMISCCV 255
+ K G++ D+++ +++ L +CR + A ++ D EM + T + N +++
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSE-ALELVDRMVEMGHKPTLITLNTLVNGLC 204
Query: 256 RNNRTRDALSLFDVMQST---------------------------------SNKCEPDDV 282
N + DA+ L D M T + D V
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 283 TXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNSLIAMYSRCGCLDKAYEVFMG- 341
SL+ + N + +G+ I N+LI + G D ++
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 342 -----TPNKSVVSWSAMISGLAVNGYGKEAIEAFEEMQRIGIRPDDQTFTGVLSACSHSG 396
+PN VV++S +I G +EA + +EM + GI P+ T+ ++
Sbjct: 325 IKRKISPN--VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 397 LVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKAYEVITTMAVK---PDPTIW 453
++E + D MI + G P+I + +++ +A +D E+ M+++ + +
Sbjct: 383 RLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 454 RTLL-GACRIHGHVTLGERVIERLIELKAQ-EAGDYVLLLNIYSSAGHWEKVAEVRTLMK 511
TL+ G C+ G + + +++ + ++ + + + Y +LL+ G EK E+ ++
Sbjct: 442 NTLVQGFCQ-SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 512 EKAIQTTPGCCTIELKGVVHEFVVDD 537
+ ++ G I + G+ + VDD
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDD 526
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 141/342 (41%), Gaps = 49/342 (14%)
Query: 146 FNTMIRAYSMSDSPQKGLYLYRDMRRRGIAANPLSSSFAVKSCIRFLDIVGGVQVHCNVF 205
+NT+I + + G L RDM +R I+ N ++ S + S +
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV---------------- 344
Query: 206 KDGHQSDSLLLTAVMDLYSQCRKGDDACKVFDEMPQR----DTVAWNVMISCCVRNNRTR 261
K+G + R+ D ++ EM QR +T+ +N +I + NR
Sbjct: 345 KEG----------------KLREAD---QLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 262 DALSLFDVMQSTSNKCEPDDVTXXXXXXXXXXXNSLEFGERIHNYIMERGYGGAINLSNS 321
+A+ + D+M S C+PD +T N ++ G + + RG N+
Sbjct: 386 EAIQMVDLM--ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 322 LIAMYSRCGCLDKAYEVFMGTPNKSV----VSWSAMISGLAVNGYGKEAIEAFEEMQRIG 377
L+ + + G L+ A ++F ++ V VS+ ++ GL NG ++A+E F ++++
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 378 IRPDDQTFTGVLSACSHSGLVDEGMSFFDRMIGEFGITPNIHHYGCMVDLLGRAGLLDKA 437
+ D + ++ ++ VD+ F + + G+ + Y M+ L R L KA
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK-GVKLDARAYNIMISELCRKDSLSKA 562
Query: 438 ---YEVITTMAVKPDPTIWRTLLGACRIHGHVTLGERVIERL 476
+ +T PD + L+ A T +IE +
Sbjct: 563 DILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604