Miyakogusa Predicted Gene

Lj4g3v1635250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1635250.1 Non Chatacterized Hit- tr|A5APJ5|A5APJ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.73,0.0000000000004, ,CUFF.49518.1
         (114 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69588.1 | Symbols: CLE45 | CLAVATA3/ESR-RELATED 45 | chr1:26...    54   3e-08

>AT1G69588.1 | Symbols: CLE45 | CLAVATA3/ESR-RELATED 45 |
           chr1:26178150-26178524 FORWARD LENGTH=124
          Length = 124

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 27/112 (24%)

Query: 29  FLVLVCVGILASQPYNVFGLRSQDLALRWEEGQLPFVRSF-------------------- 68
           F +LVC+G+LA   YNV  +R ++  L+  + +   V++                     
Sbjct: 10  FFLLVCIGLLADNRYNVSAMRHREFFLKETQAEKAGVQTEEISKLRSIGVQFKHTLEDQE 69

Query: 69  ------RVLKVVAMEDLKSKMESAPAPSMTFDPNRSNKRTVRKGSDPIHNRC 114
                 RVL+ V  + +K++ E+    + T D  +S+KR VR+GSDPIHN+ 
Sbjct: 70  MLNKNRRVLEEVNKDKIKAE-ETQERKNKTEDSFKSSKRRVRRGSDPIHNKA 120