Miyakogusa Predicted Gene
- Lj4g3v1632020.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1632020.2 tr|G7JQZ9|G7JQZ9_MEDTR Pentatricopeptide repeat
protein OS=Medicago truncatula GN=MTR_4g108610 PE=4 ,75.43,0,seg,NULL;
PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide repeat;
PPR_3,Pentatricopeptide repe,CUFF.49506.2
(662 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 866 0.0
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 490 e-138
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 468 e-132
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 467 e-131
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 461 e-130
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 459 e-129
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 455 e-128
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 454 e-128
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 454 e-127
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 451 e-127
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 451 e-127
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 444 e-125
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 444 e-125
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 442 e-124
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 437 e-122
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 433 e-121
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 430 e-120
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 429 e-120
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-120
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 425 e-119
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 422 e-118
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 421 e-118
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 421 e-117
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 420 e-117
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 420 e-117
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 414 e-115
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 412 e-115
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 411 e-115
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-111
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 400 e-111
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 398 e-111
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 393 e-109
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 392 e-109
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 391 e-109
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 387 e-107
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 380 e-105
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 372 e-103
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 369 e-102
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 362 e-100
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 361 e-100
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 361 e-100
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 361 e-99
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 360 2e-99
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 360 2e-99
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 3e-99
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 7e-99
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 1e-98
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 2e-98
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 3e-98
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 4e-98
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 6e-98
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 353 2e-97
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 348 6e-96
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 348 1e-95
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 345 6e-95
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 2e-94
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 342 6e-94
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 9e-94
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 1e-93
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 338 1e-92
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 7e-92
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 332 5e-91
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 7e-91
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 329 3e-90
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 5e-90
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 4e-89
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 322 7e-88
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 4e-87
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 3e-84
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 7e-84
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 7e-84
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 307 1e-83
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 306 2e-83
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 306 3e-83
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 306 4e-83
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 300 3e-81
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 5e-80
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 2e-79
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 292 5e-79
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 5e-78
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 6e-78
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 5e-77
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 285 5e-77
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 283 3e-76
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 280 2e-75
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 4e-73
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 8e-73
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 9e-72
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 267 1e-71
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 4e-71
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 5e-71
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 9e-69
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 258 1e-68
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 4e-68
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 4e-67
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 7e-67
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 250 3e-66
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 6e-65
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 8e-65
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 2e-64
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 243 4e-64
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 9e-62
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 8e-61
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 8e-61
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 5e-58
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 7e-51
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 2e-48
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 8e-39
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 4e-38
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 3e-35
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 127 2e-29
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 1e-26
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 115 9e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 113 5e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 7e-24
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 105 7e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 99 1e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 2e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 94 3e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 93 5e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 8e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 8e-19
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 3e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 90 5e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 86 8e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 86 1e-16
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 84 3e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 81 3e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 81 3e-15
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 80 5e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 79 9e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 78 2e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 71 2e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 4e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 67 4e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 63 5e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 63 6e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 5e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 60 5e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 59 1e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 3e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 5e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 6e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G28420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/635 (65%), Positives = 497/635 (78%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNP 87
+SLL+ C +L+ QIH G+ T F GKL+LHCA++ISDAL YA RL FP P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
D FM+NTL+R F++M R VFPDSFSFAF +K V N SL+ G Q+
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDV 207
HCQA +HG ++H+FVGTTLI MYG CG E AR+VFDEM +PN+V WNA +TACFR DV
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 208 AGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNG 267
AGAR +F +M VRN TSWNVMLAGY KAGEL A+R+FSEMP +DDVSWSTMIVG+AHNG
Sbjct: 189 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 248
Query: 268 SFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN 327
SF+++F +FREL R G+ PNEVSLTGVLSAC+Q+G+ EFGKILHGF+EK+G+ +I SVNN
Sbjct: 249 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN 308
Query: 328 ALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVR 387
ALID YS+CGNV MA+LVF M R IVSWTS+IAGLAMHG GEEA++LF+EM GV
Sbjct: 309 ALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 368
Query: 388 PDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYE 447
PDGI+FISLL+ACSH+GL+E+G + FS+MK +Y IEP IEHYGCMVDLYGR+ +L KAY+
Sbjct: 369 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 428
Query: 448 FICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGK 507
FICQMPI P A++WRTLLGACS HGNIELAE VK RL E+DPNNSGD VLLSN YA AGK
Sbjct: 429 FICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGK 488
Query: 508 WKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRA 567
WKDV SIR++M Q + KT WS++E+ K MY F AGEK + EAH+KL+EI+LRL+
Sbjct: 489 WKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKD 548
Query: 568 EAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHT 627
EAGY P+V L+D+EEEEKED VSKHSEKLA AF +A+L KG +RIVKNLR+C DCH
Sbjct: 549 EAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHA 608
Query: 628 VMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
VMKL SK Y VEI+VRDR+RFH FKDG CSCRDYW
Sbjct: 609 VMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/722 (36%), Positives = 398/722 (55%), Gaps = 74/722 (10%)
Query: 13 SGTEEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISD 72
S + +N R +SL+ +C SL+ KQ H H+ TG + P KL A++
Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78
Query: 73 ALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFAL 132
+L YA ++F P P++F +NTLIR F+ M +P+ ++F F +
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 133 KGVANGGSLKPGTQLHCQAFRHGFDTHVFVGT---------------------------- 164
K A SL G LH A + + VFV
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 165 ---TLISMYGECGDSESARRVFDEMPEPNV----VTWNAAVTAC---------------- 201
++I+ + + G + A +F +M +V VT ++AC
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 202 -------------------FRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLAR 242
+CG + A+ +F M ++ +W ML GY + + AR
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 318
Query: 243 RVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL-LREGIRPNEVSLTGVLSACAQA 301
V + MP KD V+W+ +I NG ++A F EL L++ ++ N+++L LSACAQ
Sbjct: 319 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 378
Query: 302 GASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSI 361
GA E G+ +H +++K G V +ALI YSKCG++ ++ VF ++ R + W+++
Sbjct: 379 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAM 437
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYG 421
I GLAMHG G EA+ +F++M+E+ V+P+G+TF ++ ACSH+GLV++ +F +M++ YG
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 422 IEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVK 481
I P +HY C+VD+ GR+ L KA +FI MPI P+ +W LLGAC IH N+ LAE+
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMAC 557
Query: 482 ARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGF 541
RL E++P N G HVLLSN+YA GKW++V +R+ M + K PG S IEI+ +++ F
Sbjct: 558 TRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 617
Query: 542 VAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEE-KEDSVSKHSEKLAA 600
++G+ + ++E+ + KL E+M +L++ GY P++ VL IEEEE KE S++ HSEKLA
Sbjct: 618 LSGDNAHPMSEKVYGKLHEVMEKLKSN-GYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 676
Query: 601 AFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRD 660
+G+ K +R++KNLRVCGDCH+V KLIS+ Y EIIVRDR RFH F++G CSC D
Sbjct: 677 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 736
Query: 661 YW 662
+W
Sbjct: 737 FW 738
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/638 (40%), Positives = 367/638 (57%), Gaps = 27/638 (4%)
Query: 31 LSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALH----YALRLFQHFPN 86
++ C +++ QIH +G L ++L CA SD H YA ++F P
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCAT--SDLHHRDLDYAHKIFNQMPQ 87
Query: 87 PDTFMYNTLIR--XXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
+ F +NT+IR F +M V P+ F+F LK A G ++ G
Sbjct: 88 RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 147
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRC 204
Q+H A ++GF FV + L+ MY CG + AR +F N++ + V R
Sbjct: 148 KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF----YKNIIEKDMVVMTDRRK 203
Query: 205 GDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
D + WNVM+ GY + G+ AR +F +M + VSW+TMI G +
Sbjct: 204 RD-------------GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS 250
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
NG F A FRE+ + IRPN V+L VL A ++ G+ E G+ LH + E SG
Sbjct: 251 LNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV 310
Query: 325 VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES 384
+ +ALID YSKCG + A VF + ++++W+++I G A+HG +A+ F +M ++
Sbjct: 311 LGSALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 369
Query: 385 GVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHK 444
GVRP + +I+LL ACSH GLVE+G FS+M ++ G+EP IEHYGCMVDL GR+ L +
Sbjct: 370 GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429
Query: 445 AYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAV 504
A EFI MPI P+ VIW+ LLGAC + GN+E+ + V L +M P++SG +V LSN+YA
Sbjct: 430 AEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYAS 489
Query: 505 AGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLR 564
G W +V +R M E+ + K PG S+I+I+ V++ FV + + +E + L EI +
Sbjct: 490 QGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDK 549
Query: 565 LRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGD 624
LR AGY P VL ++EEE+KE+ + HSEK+A AFG+ GK +RIVKNLR+C D
Sbjct: 550 LRL-AGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICED 608
Query: 625 CHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
CH+ +KLISK Y+ +I VRDR RFH F+DG CSC DYW
Sbjct: 609 CHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/638 (39%), Positives = 364/638 (57%), Gaps = 38/638 (5%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHC-AVTISDALHYALRLFQHFPN 86
+S L +CS + KQIH + TGL K L C + T SD L YA +F F
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFP-DSFSFAFALKGVANGGSLKPGT 145
PDTF++N +IR + R + P ++++F LK +N + + T
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSL--LLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCG 205
Q+H Q + G++ V+ +LI+ Y G+ + A +FD +PEP+ V
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV------------- 182
Query: 206 DVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH 265
SWN ++ GY KAG++ +A +F +M K+ +SW+TMI G
Sbjct: 183 ------------------SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQ 224
Query: 266 NGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSV 325
+A F E+ + P+ VSL LSACAQ GA E GK +H ++ K+ S +
Sbjct: 225 ADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVL 284
Query: 326 NNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG 385
LID Y+KCG + A VF+N+ +S+ +WT++I+G A HGHG EA+ F EM++ G
Sbjct: 285 GCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 343
Query: 386 VRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKA 445
++P+ ITF ++L ACS++GLVE+G IF M+ Y ++PTIEHYGC+VDL GRA L +A
Sbjct: 344 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 403
Query: 446 YEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVA 505
FI +MP+ PNAVIW LL AC IH NIEL E + L +DP + G +V +N++A+
Sbjct: 404 KRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMD 463
Query: 506 GKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRL 565
KW RR M EQ + K PG S I + + F+AG++ + E+ K R IM R
Sbjct: 464 KKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWR-IMRRK 522
Query: 566 RAEAGYAPQVRGVLHD-IEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGD 624
E GY P++ +L D ++++E+E V +HSEKLA +G+ K G +RI+KNLRVC D
Sbjct: 523 LEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKD 582
Query: 625 CHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
CH V KLISK Y+ +I++RDR+RFH F+DG CSC DYW
Sbjct: 583 CHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/641 (39%), Positives = 359/641 (56%), Gaps = 40/641 (6%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTIS-----DALHYALRLFQ 82
++LL CSS K IH L T L + +LL C + + L YA +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 83 HFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLK 142
NP+ F++N LIR + QM + ++PD+ +F F +K + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK-SRIWPDNITFPFLIKASSEMECVL 134
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACF 202
G Q H Q R GF V+V +L+ MY CG
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGF--------------------------- 167
Query: 203 RCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
+A A +FG+M R++ SW M+AGY K G + AR +F EMP ++ +WS MI G
Sbjct: 168 ----IAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMING 223
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
A N F++A F + REG+ NE + V+S+CA GA EFG+ + ++ KS
Sbjct: 224 YAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVN 283
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
+ AL+D + +CG++ A VF + S+ SW+SII GLA+HGH +A+ F +M
Sbjct: 284 LILGTALVDMFWRCGDIEKAIHVFEGLPETDSL-SWSSIIKGLAVHGHAHKAMHYFSQMI 342
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
G P +TF ++L ACSH GLVE+G EI+ MK +GIEP +EHYGC+VD+ GRA +L
Sbjct: 343 SLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKL 402
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVY 502
+A FI +M + PNA I LLGAC I+ N E+AE V L ++ P +SG +VLLSN+Y
Sbjct: 403 AEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIY 462
Query: 503 AVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAG-EKPNEVTEEAHDKLREI 561
A AG+W + S+R M E+ + K PGWS+IEI+ + F G ++ + + K EI
Sbjct: 463 ACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEI 522
Query: 562 MLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRV 621
+ ++R GY D++EEEKE S+ HSEKLA A+G+ K G +RIVKNLRV
Sbjct: 523 LGKIRL-IGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRV 581
Query: 622 CGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
C DCHTV KLIS+ Y E+IVRDR+RFH F++G+CSCRDYW
Sbjct: 582 CEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 265/734 (36%), Positives = 393/734 (53%), Gaps = 87/734 (11%)
Query: 6 YFIPTPSSGTEEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLH 65
+F+P+ S +++ N P +SLL C +L+ + IH + GLH KL+
Sbjct: 18 HFLPSSSDPPYDSIRN--HPS-LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEF 74
Query: 66 CAVTIS-DALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPD 124
C ++ + L YA+ +F+ P+ ++NT+ R ++ M + P+
Sbjct: 75 CILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS-LGLLPN 133
Query: 125 SFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMY---GECGDS----- 176
S++F F LK A + K G Q+H + G D ++V T+LISMY G D+
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193
Query: 177 -----------------------ESARRVFDEMPEPNVVTWNA----------------- 196
E+A+++FDE+P +VV+WNA
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253
Query: 197 ------------------AVTACFRCGDVAGARGV--------FGRMPVRNLTSWNVMLA 230
V+AC + G + R V FG NL N ++
Sbjct: 254 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS----NLKIVNALID 309
Query: 231 GYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
Y+K GEL A +F +P KD +SW+T+I G H + +A F+E+LR G PN+V+
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 291 LTGVLSACAQAGASEFGKILHGFMEK--SGFLYISSVNNALIDTYSKCGNVAMAQLVFRN 348
+ +L ACA GA + G+ +H +++K G SS+ +LID Y+KCG++ A VF N
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF-N 428
Query: 349 MSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQ 408
+ +S+ SW ++I G AMHG + + LF M + G++PD ITF+ LL ACSHSG+++
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 409 GCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGAC 468
G IF M Y + P +EHYGCM+DL G + +A E I M + P+ VIW +LL AC
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 548
Query: 469 SIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPG 528
+HGN+EL E L +++P N G +VLLSN+YA AG+W +V R + ++ M K PG
Sbjct: 549 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 608
Query: 529 WSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKE 588
S IEI+ V++ F+ G+K + E + L E+ + L +AG+ P VL ++EEE KE
Sbjct: 609 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE-KAGFVPDTSEVLQEMEEEWKE 667
Query: 589 DSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRF 648
++ HSEKLA AFG+ G +L IVKNLRVC +CH KLISK Y+ EII RDR+RF
Sbjct: 668 GALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRF 727
Query: 649 HLFKDGLCSCRDYW 662
H F+DG+CSC DYW
Sbjct: 728 HHFRDGVCSCNDYW 741
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/632 (39%), Positives = 364/632 (57%), Gaps = 52/632 (8%)
Query: 80 LFQHFPNP-DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
LF + + D F +N++I F MR+ +++P SF A+K ++
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRK-LSLYPTRSSFPCAIKACSSL 89
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
+ G Q H QAF G+ + +FV + LI MY CG E AR+VFDE+P+ N+V+W + +
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 199 TACFRCGDVAGARGVF----------------------------GRMPVRNLTS------ 224
G+ A +F R+P + LT
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 225 -----------WNVMLAGYTKAGELGLA--RRVFSEMPLKDDVSWSTMIVGLAHNGSFDQ 271
N +L Y K GE G+A R++F ++ KD VS+++++ A +G ++
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 272 AFGFFRELLREGIRP-NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALI 330
AF FR L++ + N ++L+ VL A + +GA GK +H + + G V ++I
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 331 DTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDG 390
D Y KCG V A+ F M +++ SWT++IAG MHGH +AL+LF M +SGVRP+
Sbjct: 330 DMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 391 ITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFIC 450
ITF+S+L ACSH+GL +G F+ MK +G+EP +EHYGCMVDL GRA L KAY+ I
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 451 QMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKD 510
+M + P+++IW +LL AC IH N+ELAE+ ARL E+D +N G ++LLS++YA AG+WKD
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 511 VVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAG 570
V +R M + +VK PG+S++E+N ++ F+ G++ + E+ ++ L E+ +L EAG
Sbjct: 509 VERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL-LEAG 567
Query: 571 YAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMK 630
Y V HD++EEEKE ++ HSEKLA AFGI G + +VKNLRVC DCH V+K
Sbjct: 568 YVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIK 627
Query: 631 LISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
LISK E +VRD RFH FKDG CSC DYW
Sbjct: 628 LISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 134/351 (38%), Gaps = 66/351 (18%)
Query: 28 VSLLSKCSSLKP---TKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHF 84
VS++S CS + T+ IH+ + G LL A + A ++F
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
+ D YN+++ F ++ ++ V ++ + + L V++ G+L+ G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRC 204
+H Q R G + V VGT++I MY +CG E+AR+ FD M NV +W A
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA-------- 358
Query: 205 GDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
M+AGY G A +F M
Sbjct: 359 -----------------------MIAGYGMHGHAAKALELFPAM---------------- 379
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFG-KILHGFMEKSGFLYIS 323
+ G+RPN ++ VL+AC+ AG G + + + G
Sbjct: 380 ---------------IDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424
Query: 324 SVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEA 374
++D + G + A + + M + + W+S++A +H + E A
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 454 bits (1169), Expect = e-128, Method: Compositional matrix adjust.
Identities = 278/732 (37%), Positives = 388/732 (53%), Gaps = 89/732 (12%)
Query: 8 IPTPSSGTEEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCA 67
+P P + T A + LE LS C SL KQ+H H+ T ++ F L
Sbjct: 3 LPPPIAST--AANTILEK-----LSFCKSLNHIKQLHAHILRTVINHKLNSF--LFNLSV 53
Query: 68 VTISDALHYALRLFQHFPNP-DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSF 126
+ S L YAL +F P+P ++ ++N +R F Q RH D F
Sbjct: 54 SSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATI-LFYQRIRHVGGRLDQF 112
Query: 127 SFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFD-- 184
SF LK V+ +L G +LH AF+ FV T + MY CG AR VFD
Sbjct: 113 SFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEM 172
Query: 185 -----------------------------EMPEPNVV----TWNAAVTACFRCGDV---- 207
EM + NV+ V+AC R G++
Sbjct: 173 SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 232
Query: 208 ---------------------------AG----ARGVFGRMPVRNLTSWNVMLAGYTKAG 236
AG AR F +M VRNL M++GY+K G
Sbjct: 233 AIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCG 292
Query: 237 ELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLS 296
L A+ +F + KD V W+TMI + +A F E+ GI+P+ VS+ V+S
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVIS 352
Query: 297 ACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIV 356
ACA G + K +H + +G S+NNALI+ Y+KCG + + VF M R++V
Sbjct: 353 ACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVV 411
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM 416
SW+S+I L+MHG +AL LF M++ V P+ +TF+ +LY CSHSGLVE+G +IF+ M
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Query: 417 KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIEL 476
+ Y I P +EHYGCMVDL+GRA L +A E I MP++ N VIW +L+ AC IHG +EL
Sbjct: 472 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELEL 531
Query: 477 AELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINK 536
+ R+ E++P++ G VL+SN+YA +W+DV +IRR M E+++ K G S I+ N
Sbjct: 532 GKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNG 591
Query: 537 VMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSE 596
+ F+ G+K ++ + E + KL E++ +L+ AGY P VL D+EEEEK+D V HSE
Sbjct: 592 KSHEFLIGDKRHKQSNEIYAKLDEVVSKLKL-AGYVPDCGSVLVDVEEEEKKDLVLWHSE 650
Query: 597 KLAAAFGIAKLPKGKQ------LRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHL 650
KLA FG+ K ++ +RIVKNLRVC DCH KL+SK Y+ EIIVRDR+RFH
Sbjct: 651 KLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHC 710
Query: 651 FKDGLCSCRDYW 662
+K+GLCSCRDYW
Sbjct: 711 YKNGLCSCRDYW 722
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/518 (44%), Positives = 334/518 (64%), Gaps = 20/518 (3%)
Query: 159 HVFVGTTLISMYGECGDSESARRVFDEMP-----EPNVVTWNAAVTACFRCGDV------ 207
+VF+ TLI Y E G+S SA ++ EM EP+ T+ + A DV
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 208 --AGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH 265
R FG + + N +L Y G++ A +VF +MP KD V+W+++I G A
Sbjct: 144 HSVVIRSGFGSL----IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 266 NGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSV 325
NG ++A + E+ +GI+P+ ++ +LSACA+ GA GK +H +M K G
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259
Query: 326 NNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES- 384
+N L+D Y++CG V A+ +F M V ++ VSWTS+I GLA++G G+EA++LF ME +
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 385 GVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHK 444
G+ P ITF+ +LYACSH G+V++G E F +M+ Y IEP IEH+GCMVDL RA ++ K
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 445 AYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAV 504
AYE+I MP+ PN VIWRTLLGAC++HG+ +LAE + ++ +++PN+SGD+VLLSN+YA
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438
Query: 505 AGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLR 564
+W DV IR+ M + K PG S++E+ ++ F+ G+K + ++ + KL+E+ R
Sbjct: 439 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 498
Query: 565 LRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGD 624
LR+E GY PQ+ V D+EEEEKE++V HSEK+A AF + P+ + +VKNLRVC D
Sbjct: 499 LRSE-GYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCAD 557
Query: 625 CHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
CH +KL+SK Y EI+VRDRSRFH FK+G CSC+DYW
Sbjct: 558 CHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 174/395 (44%), Gaps = 66/395 (16%)
Query: 35 SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDA--LHYALRLFQHFPNP-DTFM 91
SS+ +QIH G+ GK L+ V++ + YA ++F P + F+
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 92 YNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQA 151
+NTLIR + +MR V PD+ ++ F +K V ++ G +H
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 152 FRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV------------- 198
R GF + ++V +L+ +Y CGD SA +VFD+MPE ++V WN+ +
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 199 ----------------------TACFRCGDVAGARGVFGRMP----VRNLTSWNVMLAGY 232
+AC + G + + V M RNL S NV+L Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 233 TKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL-LREGIRPNEVSL 291
+ G + A+ +F EM K+ VSW+++IVGLA NG +A F+ + EG+ P E++
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN------------ALIDTYSKCGNV 339
G+L AC+ G M K GF Y + ++D ++ G V
Sbjct: 328 VGILYACSHCG-----------MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 340 AMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEA 374
A ++M + ++V W +++ +HG + A
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/622 (37%), Positives = 351/622 (56%), Gaps = 38/622 (6%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A ++F P DT ++NT+I F + D+ + L VA
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
L+ G Q+H A + G +H +V T IS+Y +CG + +F E +P++V +NA
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 197 AVTACFRCGDVAGARGVF-------GRMPVRNLTSW------------------------ 225
+ G+ + +F R+ L S
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLS 352
Query: 226 -----NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELL 280
+ Y+K E+ AR++F E P K SW+ MI G NG + A FRE+
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
+ PN V++T +LSACAQ GA GK +H + + F V+ ALI Y+KCG++A
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIA 472
Query: 341 MAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
A+ +F ++ ++ V+W ++I+G +HG G+EAL +F+EM SG+ P +TF+ +LYAC
Sbjct: 473 EARRLF-DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531
Query: 401 SHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI 460
SH+GLV++G EIF+ M + YG EP+++HY CMVD+ GRA L +A +FI M I P + +
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV 591
Query: 461 WRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTE 520
W TLLGAC IH + LA V +L E+DP+N G HVLLSN+++ + ++R+T +
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKK 651
Query: 521 QSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLH 580
+ + K PG+++IEI + + F +G++ + +E ++KL ++ ++R EAGY P+ LH
Sbjct: 652 RKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR-EAGYQPETELALH 710
Query: 581 DIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEI 640
D+EEEE+E V HSE+LA AFG+ G ++RI+KNLRVC DCHTV KLISK + I
Sbjct: 711 DVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVI 770
Query: 641 IVRDRSRFHLFKDGLCSCRDYW 662
+VRD +RFH FKDG+CSC DYW
Sbjct: 771 VVRDANRFHHFKDGVCSCGDYW 792
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/510 (24%), Positives = 224/510 (43%), Gaps = 53/510 (10%)
Query: 7 FIPTPSSGTEEAMSNTLEPR-WVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLH 65
+ T SS T E + + ++ + +S+ Q H + + G KL
Sbjct: 2 LLRTVSSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKL--- 58
Query: 66 CAVTISD--ALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFP 123
+SD A++YA +F PD F++N L+R F +R+ + P
Sbjct: 59 -TQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKP 117
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
+S ++AFA+ + + G +H QA G D+ + +G+ ++ MY + E AR+VF
Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177
Query: 184 DEMPEPNVVTWNAAVT---------------------ACFRCGD---------VAGARGV 213
D MPE + + WN ++ +C R VA + +
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237
Query: 214 FGRMPVRNLT------SWNVMLAG----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGL 263
M + +L S + +L G Y+K G++ + +F E D V+++ MI G
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 264 AHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS 323
NG + + F+EL+ G R +L ++ +G +HG+ KS FL +
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHA 354
Query: 324 SVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE 383
SV+ AL YSK + A+ +F + S +S+ SW ++I+G +G E+A+ LF EM++
Sbjct: 355 SVSTALTTVYSKLNEIESARKLF-DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 413
Query: 384 SGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLH 443
S P+ +T +L AC+ G + G + +++ E +I ++ +Y + +
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIA 472
Query: 444 KAYEFICQMPISPNAVIWRTLLGACSIHGN 473
+A M N V W T++ +HG
Sbjct: 473 EARRLFDLMT-KKNEVTWNTMISGYGLHGQ 501
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/539 (42%), Positives = 327/539 (60%), Gaps = 6/539 (1%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D S+ + G A G + QL F VF T ++S Y + E AR +F
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQL----FDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 184 DEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARR 243
D+MPE N V+WNA + + + A+ +F MP RN+++WN M+ GY + G++ A+
Sbjct: 305 DKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKN 364
Query: 244 VFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGA 303
+F +MP +D VSW+ MI G + +G +A F ++ REG R N S + LS CA A
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 304 SEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIA 363
E GK LHG + K G+ V NAL+ Y KCG++ A +F+ M+ G+ IVSW ++IA
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIA 483
Query: 364 GLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIE 423
G + HG GE AL+ F M+ G++PD T +++L ACSH+GLV++G + F M YG+
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 424 PTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKAR 483
P +HY CMVDL GRA L A+ + MP P+A IW TLLGA +HGN ELAE +
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603
Query: 484 LAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVA 543
+ M+P NSG +VLLSN+YA +G+W DV +R M ++ + K PG+S IEI + F
Sbjct: 604 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 663
Query: 544 GEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFG 603
G++ + +E L E+ LR++ +AGY + VLHD+EEEEKE V HSE+LA A+G
Sbjct: 664 GDEFHPEKDEIFAFLEELDLRMK-KAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYG 722
Query: 604 IAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
I ++ G+ +R++KNLRVC DCH +K +++ II+RD +RFH FKDG CSC DYW
Sbjct: 723 IMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 172/361 (47%), Gaps = 24/361 (6%)
Query: 134 GVANGGSLKPGTQLHCQAFRHG-----FDTHVFVGTTLISMYGECGDSESARRVFDEMPE 188
G AN SLK TQ Q + D+ + IS Y G A RVF MP
Sbjct: 33 GAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPR 92
Query: 189 PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEM 248
+ V++N ++ R G+ AR +F MP R+L SWNVM+ GY + LG AR +F M
Sbjct: 93 WSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM 152
Query: 249 PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK 308
P +D SW+TM+ G A NG D A F + + N+VS +LSA Q E
Sbjct: 153 PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEAC 208
Query: 309 ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMH 368
+L F + + +S N L+ + K + A+ F +M+V R +VSW +II G A
Sbjct: 209 ML--FKSRENWALVSW--NCLLGGFVKKKKIVEARQFFDSMNV-RDVVSWNTIITGYAQS 263
Query: 369 GHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEH 428
G +EA QLF +ES V+ D T+ +++ + +VE+ E+F KM E
Sbjct: 264 GKIDEARQLF---DESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMP-----ERNEVS 314
Query: 429 YGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD 488
+ M+ Y + R+ A E MP N W T++ + G I A+ + ++ + D
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Query: 489 P 489
P
Sbjct: 374 P 374
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/673 (36%), Positives = 363/673 (53%), Gaps = 44/673 (6%)
Query: 29 SLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPD 88
+L+S ++ KQIH L LH H F LLL + Y+ LF H P+
Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLH-HDTFLVNLLLKRTLFFRQT-KYSYLLFSHTQFPN 75
Query: 89 TFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLH 148
F+YN+LI F+ +R+H ++ F+F LK S K G LH
Sbjct: 76 IFLYNSLINGFVNNHLFHETLDLFLSIRKHG-LYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 149 CQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA------------ 196
+ GF+ V T+L+S+Y G A ++FDE+P+ +VVTW A
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 197 -----------------------AVTACFRCGDVAGARGVFGRMP----VRNLTSWNVML 229
++AC GD+ + M +N ++
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 230 AGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEV 289
Y K G++ AR VF M KD V+WSTMI G A N + F ++L+E ++P++
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQF 314
Query: 290 SLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM 349
S+ G LS+CA GA + G+ +++ FL + NALID Y+KCG +A VF+ M
Sbjct: 315 SIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 350 SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQG 409
+ IV + I+GLA +GH + + +F + E+ G+ PDG TF+ LL C H+GL++ G
Sbjct: 375 K-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433
Query: 410 CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACS 469
F+ + +Y ++ T+EHYGCMVDL+GRA L AY IC MP+ PNA++W LL C
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493
Query: 470 IHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGW 529
+ + +LAE V L ++P N+G++V LSN+Y+V G+W + +R M ++ M K PG+
Sbjct: 494 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGY 553
Query: 530 SMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKED 589
S IE+ ++ F+A +K + ++++ + KL ++ +R G+ P V D+EEEEKE
Sbjct: 554 SWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL-MGFVPTTEFVFFDVEEEEKER 612
Query: 590 SVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFH 649
+ HSEKLA A G+ G+ +R+VKNLRVCGDCH VMKLISK + EI+VRD +RFH
Sbjct: 613 VLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFH 672
Query: 650 LFKDGLCSCRDYW 662
F +G CSC DYW
Sbjct: 673 CFTNGSCSCNDYW 685
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/666 (37%), Positives = 365/666 (54%), Gaps = 43/666 (6%)
Query: 2 PLMSYFIPTPSSGTEEAMSNTLEP--RWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLF- 58
PL++ +P T L P + L+ K S+ QIH + L HP +
Sbjct: 5 PLLATSLPQNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYP 64
Query: 59 FGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRH 118
L LH A + ++L LF +PD F++ I ++Q+
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS- 123
Query: 119 PTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSES 178
+ P+ F+F+ LK S K G +H + G +V T L+ +Y
Sbjct: 124 SEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYA------- 172
Query: 179 ARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGEL 238
+ GDV A+ VF RMP R+L S M+ Y K G +
Sbjct: 173 ------------------------KGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 208
Query: 239 GLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI-RPNEVSLTGVLSA 297
AR +F M +D VSW+ MI G A +G + A F++LL EG +P+E+++ LSA
Sbjct: 209 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 268
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVS 357
C+Q GA E G+ +H F++ S V LID YSKCG++ A LVF N + + IV+
Sbjct: 269 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVF-NDTPRKDIVA 327
Query: 358 WTSIIAGLAMHGHGEEALQLFHEMEE-SGVRPDGITFISLLYACSHSGLVEQGCEIFSKM 416
W ++IAG AMHG+ ++AL+LF+EM+ +G++P ITFI L AC+H+GLV +G IF M
Sbjct: 328 WNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Query: 417 KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIEL 476
YGI+P IEHYGC+V L GRA +L +AYE I M + ++V+W ++LG+C +HG+ L
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVL 447
Query: 477 AELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINK 536
+ + L ++ NSG +VLLSN+YA G ++ V +R M E+ +VK PG S IEI
Sbjct: 448 GKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN 507
Query: 537 VMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSE 596
++ F AG++ + ++E + LR+I R+++ GY P VL D+EE EKE S+ HSE
Sbjct: 508 KVHEFRAGDREHSKSKEIYTMLRKISERIKSH-GYVPNTNTVLQDLEETEKEQSLQVHSE 566
Query: 597 KLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLC 656
+LA A+G+ G L+I KNLRVC DCHTV KLISK +I++RDR+RFH F DG C
Sbjct: 567 RLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSC 626
Query: 657 SCRDYW 662
SC D+W
Sbjct: 627 SCGDFW 632
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/643 (36%), Positives = 363/643 (56%), Gaps = 10/643 (1%)
Query: 24 EPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQH 83
E ++SL+ C + +H + G+ + + L+ C+ ++ + Y+L +F++
Sbjct: 29 ESHFISLIHACKDTASLRHVHAQILRRGVLSSRV--AAQLVSCS-SLLKSPDYSLSIFRN 85
Query: 84 FPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKP 143
+ F+ N LIR FI M R V PD +F F LK + G
Sbjct: 86 SEERNPFVLNALIRGLTENARFESSVRHFILMLR-LGVKPDRLTFPFVLKSNSKLGFRWL 144
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVT 199
G LH ++ D FV +L+ MY + G + A +VF+E P+ +++ WN +
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 200 ACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTM 259
R D+ A +F MP RN SW+ ++ GY +GEL A+++F MP K+ VSW+T+
Sbjct: 205 GYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTL 264
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGF 319
I G + G ++ A + E+L +G++PNE ++ VLSAC+++GA G +HG++ +G
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 320 LYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
++ AL+D Y+KCG + A VF NM+ + I+SWT++I G A+HG +A+Q F
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVFSNMN-HKDILSWTAMIQGWAVHGRFHQAIQCFR 383
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRA 439
+M SG +PD + F+++L AC +S V+ G F M+ Y IEPT++HY +VDL GRA
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 440 ARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLS 499
+L++A+E + MPI+P+ W L AC H AE V L E+DP G ++ L
Sbjct: 444 GKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLD 503
Query: 500 NVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLR 559
+A G +DV R ++ ++ ++ GWS IE++ + F AG+ +++T+E KL
Sbjct: 504 KTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLD 563
Query: 560 EIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNL 619
EI + L + GY P +HDIEEEEKE+ HSEKLA G + G +RI+KNL
Sbjct: 564 EI-ISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNL 622
Query: 620 RVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
R+CGDCH++MK +SK Q +I++RD +FH FKDG CSC DYW
Sbjct: 623 RICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/438 (47%), Positives = 302/438 (68%), Gaps = 3/438 (0%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N +L Y G++ A +VF +MP KD V+W+++I G A NG ++A + E+ +GI+
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
P+ ++ +LSACA+ GA GK +H +M K G +N L+D Y++CG V A+ +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES-GVRPDGITFISLLYACSHSG 404
F M V ++ VSWTS+I GLA++G G+EA++LF ME + G+ P ITF+ +LYACSH G
Sbjct: 147 FDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 205
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
+V++G E F +M+ Y IEP IEH+GCMVDL RA ++ KAYE+I MP+ PN VIWRTL
Sbjct: 206 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 465 LGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMV 524
LGAC++HG+ +LAE + ++ +++PN+SGD+VLLSN+YA +W DV IR+ M +
Sbjct: 266 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 525 KTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEE 584
K PG S++E+ ++ F+ G+K + ++ + KL+E+ RLR+E GY PQ+ V D+EE
Sbjct: 326 KVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSE-GYVPQISNVYVDVEE 384
Query: 585 EEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRD 644
EEKE++V HSEK+A AF + P+ + +VKNLRVC DCH +KL+SK Y EI+VRD
Sbjct: 385 EEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRD 444
Query: 645 RSRFHLFKDGLCSCRDYW 662
RSRFH FK+G CSC+DYW
Sbjct: 445 RSRFHHFKNGSCSCQDYW 462
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 63/288 (21%)
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
++ G +H R GF + ++V +L+ +Y CGD SA +VFD+MPE ++V WN+ +
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 199 -----------------------------------TACFRCGDVAGARGVFGRMP----V 219
+AC + G + + V M
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 220 RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL 279
RNL S NV+L Y + G + A+ +F EM K+ VSW+++IVGLA NG +A F+ +
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 280 -LREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN----------- 327
EG+ P E++ G+L AC+ G M K GF Y +
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCG-----------MVKEGFEYFRRMREEYKIEPRIEHF 230
Query: 328 -ALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEA 374
++D ++ G V A ++M + ++V W +++ +HG + A
Sbjct: 231 GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 22/268 (8%)
Query: 57 LFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMR 116
++ LLH D A ++F P D +N++I + +M
Sbjct: 23 IYVQNSLLHLYANCGDVAS-AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN 81
Query: 117 RHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDS 176
+ PD F+ L A G+L G ++H + G ++ L+ +Y CG
Sbjct: 82 S-KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 140
Query: 177 ESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVF-------GRMPVRNLTSWNVML 229
E A+ +FDEM + N V+W + + G A +F G +P +T ++
Sbjct: 141 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE-ITFVGILY 199
Query: 230 A----GYTKAGELGLARRVFSEMPLKDDVS-WSTMIVGLAHNGSFDQAFGFFRELLREGI 284
A G K G RR+ E ++ + + M+ LA G +A+ + + + +
Sbjct: 200 ACSHCGMVKEG-FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM---PM 255
Query: 285 RPNEVSLTGVLSACAQAGAS---EFGKI 309
+PN V +L AC G S EF +I
Sbjct: 256 QPNVVIWRTLLGACTVHGDSDLAEFARI 283
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/636 (36%), Positives = 349/636 (54%), Gaps = 34/636 (5%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNP 87
++LL + K +QIH LYV G G + A++ L YA ++ P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQ-MRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
F N++IR + + + + PD+++ F ++ + G Q
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
+H R GFD V T LIS+Y E G +S +VF+ +P P+ V A VTAC RC
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC-- 187
Query: 207 VAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHN 266
G++ AR++F MP +D ++W+ MI G A
Sbjct: 188 -----------------------------GDVVFARKLFEGMPERDPIAWNAMISGYAQV 218
Query: 267 GSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN 326
G +A F + EG++ N V++ VLSAC Q GA + G+ H ++E++ +
Sbjct: 219 GESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLA 278
Query: 327 NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGV 386
L+D Y+KCG++ A VF M +++ +W+S + GLAM+G GE+ L+LF M++ GV
Sbjct: 279 TTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGV 337
Query: 387 RPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAY 446
P+ +TF+S+L CS G V++G F M+N +GIEP +EHYGC+VDLY RA RL A
Sbjct: 338 TPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAV 397
Query: 447 EFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAG 506
I QMP+ P+A +W +LL A ++ N+EL L ++ E++ N G +VLLSN+YA +
Sbjct: 398 SIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSN 457
Query: 507 KWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLR 566
W +V +R++M + + K PG S++E+N ++ F G+K + + ++I RLR
Sbjct: 458 DWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLR 517
Query: 567 AEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCH 626
AGY V+ DI+EEEKED++ HSEK A AFGI L + +RIVKNLRVCGDCH
Sbjct: 518 L-AGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCH 576
Query: 627 TVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
V +ISK + EIIVRDR+RFH FKDG CSC +W
Sbjct: 577 QVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/680 (35%), Positives = 364/680 (53%), Gaps = 53/680 (7%)
Query: 27 WVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPN 86
+ SL+ + KQIH L V GL KL+ H + + D + +A ++F P
Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGD-ITFARQVFDDLPR 81
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P F +N +IR + M+ V PDSF+F LK + L+ G
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEP--NVVTWNAAVTACFRC 204
+H Q FR GFD VFV LI++Y +C SAR VF+ +P P +V+W A V+A +
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
Query: 205 GDVAGARGVFGRM-------------PVRN-----------------------------L 222
G+ A +F +M V N L
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 223 TSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE 282
S N M Y K G++ A+ +F +M + + W+ MI G A NG +A F E++ +
Sbjct: 261 ISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 283 GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMA 342
+RP+ +S+T +SACAQ G+ E + ++ ++ +S + +++ALID ++KCG+V A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 343 QLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSH 402
+LVF + ++ R +V W+++I G +HG EA+ L+ ME GV P+ +TF+ LL AC+H
Sbjct: 378 RLVF-DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWR 462
SG+V +G F++M + + I P +HY C++DL GRA L +AYE I MP+ P +W
Sbjct: 437 SGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495
Query: 463 TLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQS 522
LL AC H ++EL E +L +DP+N+G +V LSN+YA A W V +R M E+
Sbjct: 496 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 555
Query: 523 MVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDI 582
+ K G S +E+ + F G+K + EE ++ I RL+ E G+ LHD+
Sbjct: 556 LNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK-EGGFVANKDASLHDL 614
Query: 583 EEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIV 642
+EE E+++ HSE++A A+G+ P+G LRI KNLR C +CH KLISK EI+V
Sbjct: 615 NDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVV 674
Query: 643 RDRSRFHLFKDGLCSCRDYW 662
RD +RFH FKDG+CSC DYW
Sbjct: 675 RDTNRFHHFKDGVCSCGDYW 694
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/591 (39%), Positives = 322/591 (54%), Gaps = 34/591 (5%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALK 133
+ A+ F+ D +N++I F +M R + PD F+ A L
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 134 GVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVT 193
AN L G Q+H GFD V LISMY
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS---------------------- 325
Query: 194 WNAAVTACFRCGDVAGARGVFGRMPVRNLT--SWNVMLAGYTKAGELGLARRVFSEMPLK 251
RCG V AR + + ++L + +L GY K G++ A+ +F + +
Sbjct: 326 ---------RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 252 DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILH 311
D V+W+ MIVG +GS+ +A FR ++ G RPN +L +LS + + GK +H
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 312 GFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHG 371
G KSG +Y SV+NALI Y+K GN+ A F + R VSWTS+I LA HGH
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 372 EEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGC 431
EEAL+LF M G+RPD IT++ + AC+H+GLV QG + F MK++ I PT+ HY C
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 432 MVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNN 491
MVDL+GRA L +A EFI +MPI P+ V W +LL AC +H NI+L ++ RL ++P N
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 492 SGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVT 551
SG + L+N+Y+ GKW++ IR++M + + K G+S IE+ ++ F + +
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEK 676
Query: 552 EEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGK 611
E + +++I ++ + GY P VLHD+EEE KE + HSEKLA AFG+ P
Sbjct: 677 NEIYMTMKKIWDEIK-KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKT 735
Query: 612 QLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
LRI+KNLRVC DCHT +K ISK EIIVRD +RFH FKDG CSCRDYW
Sbjct: 736 TLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 173/390 (44%), Gaps = 95/390 (24%)
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
+HC+ + G V++ L+++Y + G + AR++FDEM
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEM-------------------- 75
Query: 207 VAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHN 266
P+R SWN +L+ Y+K G++ F ++P +D VSW+TMIVG +
Sbjct: 76 -----------PLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNI 124
Query: 267 GSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN 326
G + +A ++++EGI P + +LT VL++ A E GK +H F+ K G SV+
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 327 NALIDTYSKCGNVAMAQLVFRNMSV------------------------------GRSIV 356
N+L++ Y+KCG+ MA+ VF M V R IV
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEM-EESGVRPDGITFISLLYACS-----------HSG 404
+W S+I+G G+ AL +F +M +S + PD T S+L AC+ HS
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 405 LVEQGCEI----FSKMKNLY----GIEPT-------------IEHYGCMVDLYGRAARLH 443
+V G +I + + ++Y G+E IE + ++D Y + ++
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364
Query: 444 KAYEFICQMPISPNAVIWRTLLGACSIHGN 473
+A + + V W ++ HG+
Sbjct: 365 QAKNIFVSLK-DRDVVAWTAMIVGYEQHGS 393
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 189/461 (40%), Gaps = 76/461 (16%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
F P D+ + T+I M + + P F+ L VA
Sbjct: 102 FFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG-IEPTQFTLTNVLASVAATR 160
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT 199
++ G ++H + G +V V +L++MY +CGD A+ VFD M ++ +WNA +
Sbjct: 161 CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
Query: 200 ACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTM 259
+ G + A F +M R++ +WN M++G+ + G A +FS+M L+D +
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM-LRDSL----- 274
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGF 319
+ P+ +L VLSACA GK +H + +GF
Sbjct: 275 ------------------------LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF 310
Query: 320 LYISSVNNALIDTYSKCGNVAMAQLVF-----------------------------RNMS 350
V NALI YS+CG V A+ + +N+
Sbjct: 311 DISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIF 370
Query: 351 VG---RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVE 407
V R +V+WT++I G HG EA+ LF M G RP+ T ++L S +
Sbjct: 371 VSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLS 430
Query: 408 QGCEIFS---KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
G +I K +Y + + ++ +Y +A + A + + V W ++
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVS----NALITMYAKAGNITSASRAFDLIRCERDTVSWTSM 486
Query: 465 LGACSIHGNIELA-ELVKARLAE-MDPNNSGDHVLLSNVYA 503
+ A + HG+ E A EL + L E + P DH+ V++
Sbjct: 487 IIALAQHGHAEEALELFETMLMEGLRP----DHITYVGVFS 523
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/584 (39%), Positives = 334/584 (57%), Gaps = 42/584 (7%)
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHP---FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
++F++N +IR P +++MR H V PD +F F L N L G
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNH-RVSPDFHTFPFLLPSFHNPLHLPLG 81
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRC 204
+ H Q G D FV T+L++MY CGD S
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRS-------------------------- 115
Query: 205 GDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
A+ VF ++L +WN ++ Y KAG + AR++F EMP ++ +SWS +I G
Sbjct: 116 -----AQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 265 HNGSFDQAFGFFRELL-----REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGF 319
G + +A FRE+ +RPNE +++ VLSAC + GA E GK +H +++K
Sbjct: 171 MCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHV 230
Query: 320 LYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
+ ALID Y+KCG++ A+ VF + + + +++++I LAM+G +E QLF
Sbjct: 231 EIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFS 290
Query: 380 EMEES-GVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGR 438
EM S + P+ +TF+ +L AC H GL+ +G F M +GI P+I+HYGCMVDLYGR
Sbjct: 291 EMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGR 350
Query: 439 AARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLL 498
+ + +A FI MP+ P+ +IW +LL + G+I+ E RL E+DP NSG +VLL
Sbjct: 351 SGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLL 410
Query: 499 SNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKL 558
SNVYA G+W +V IR M + + K PG S +E+ V++ FV G++ + +E + L
Sbjct: 411 SNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAML 470
Query: 559 REIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKN 618
EIM RLR EAGY + VL D+ E++KE ++S HSEKLA AF + K G +RI+KN
Sbjct: 471 DEIMQRLR-EAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKN 529
Query: 619 LRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
LR+CGDCH VMK+ISK + EI+VRD +RFH F+DG CSCRD+W
Sbjct: 530 LRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/591 (38%), Positives = 334/591 (56%), Gaps = 19/591 (3%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
ALR+F +T +N+L+ H PD+FS+ L
Sbjct: 80 ALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD----EIPEPDTFSYNIMLSCYV 135
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVG----TTLISMYGECGDSESARRVFDEMPEPNVV 192
+ + Q+F FD F T+I+ Y G+ E AR +F M E N V
Sbjct: 136 RNVNFEKA-----QSF---FDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV 187
Query: 193 TWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPL-K 251
+WNA ++ CGD+ A F PVR + +W M+ GY KA ++ LA +F +M + K
Sbjct: 188 SWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNK 247
Query: 252 DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILH 311
+ V+W+ MI G N + FR +L EGIRPN L+ L C++ A + G+ +H
Sbjct: 248 NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIH 307
Query: 312 GFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHG 371
+ KS + +LI Y KCG + A +F M + +V+W ++I+G A HG+
Sbjct: 308 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNA 366
Query: 372 EEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGC 431
++AL LF EM ++ +RPD ITF+++L AC+H+GLV G F M Y +EP +HY C
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTC 426
Query: 432 MVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNN 491
MVDL GRA +L +A + I MP P+A ++ TLLGAC +H N+ELAE +L +++ N
Sbjct: 427 MVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQN 486
Query: 492 SGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVT 551
+ +V L+N+YA +W+DV +R+ M E ++VK PG+S IEI ++ F + ++ +
Sbjct: 487 AAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPEL 546
Query: 552 EEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGK 611
+ H K + + + AGY P++ LH++EEE+KE + HSEKLA AFG KLP+G
Sbjct: 547 DSIH-KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGS 605
Query: 612 QLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
Q+++ KNLR+CGDCH +K IS+ + EIIVRD +RFH FKDG CSC DYW
Sbjct: 606 QIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/509 (41%), Positives = 316/509 (62%), Gaps = 7/509 (1%)
Query: 157 DTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGR 216
+ +V TT+I+ Y + + AR++F+ MPE V+W + + G + A F
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV 259
Query: 217 MPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
MP++ + + N M+ G+ + GE+ ARRVF M +D+ +W MI G +A F
Sbjct: 260 MPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLF 319
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGF---LYISSVNNALIDTY 333
++ ++G+RP+ SL +LS CA + ++G+ +H + + F +Y++SV L+ Y
Sbjct: 320 AQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV---LMTMY 376
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
KCG + A+LVF S + I+ W SII+G A HG GEEAL++FHEM SG P+ +T
Sbjct: 377 VKCGELVKAKLVFDRFS-SKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTL 435
Query: 394 ISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP 453
I++L ACS++G +E+G EIF M++ + + PT+EHY C VD+ GRA ++ KA E I M
Sbjct: 436 IAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT 495
Query: 454 ISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVS 513
I P+A +W LLGAC H ++LAE+ +L E +P+N+G +VLLS++ A KW DV
Sbjct: 496 IKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAV 555
Query: 514 IRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAP 573
+R+ M ++ K PG S IE+ K ++ F G N + + E L EAGY+P
Sbjct: 556 VRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSP 615
Query: 574 QVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLIS 633
VLHD++EEEK DS+S+HSE+LA A+G+ KLP+G +R++KNLRVCGDCH +KLIS
Sbjct: 616 DCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLIS 675
Query: 634 KFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
K + EII+RD +RFH F +G CSCRDYW
Sbjct: 676 KVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 157/350 (44%), Gaps = 34/350 (9%)
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAG 209
Q F + +V L+S Y + AR VF+ MPE NVV+W A V + G V
Sbjct: 69 QLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGE 128
Query: 210 ARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSF 269
A +F RMP RN SW VM G G + AR+++ MP+KD V+ + MI GL G
Sbjct: 129 AESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRV 188
Query: 270 DQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM-EKSGFLYISSV--- 325
D+A F E +RE N V+ T +++ Q + + L M EK+ + S +
Sbjct: 189 DEARLIFDE-MRE---RNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGY 244
Query: 326 -----------------------NNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSII 362
NA+I + + G ++ A+ VF M R +W +I
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMI 303
Query: 363 AGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGI 422
G EAL LF +M++ GVRP + IS+L C+ ++ G ++ + +
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ-F 362
Query: 423 EPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
+ + ++ +Y + L KA + + S + ++W +++ + HG
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKA-KLVFDRFSSKDIIMWNSIISGYASHG 411
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 136/306 (44%), Gaps = 19/306 (6%)
Query: 167 ISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWN 226
IS G AR+ FD + + +WN+ V+ F G AR +F M RN+ SWN
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 227 VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
+++GY K + AR VF MP ++ VSW+ M+ G G +A F +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER---- 139
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
NEVS T + G + + L+ M ++S N +I + G V A+L+F
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV--VASTN--MIGGLCREGRVDEARLIF 195
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLV 406
M R++V+WT++I G + + A +LF M E +++ S+L + SG +
Sbjct: 196 DEMR-ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRI 250
Query: 407 EQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLG 466
E E F M ++P I M+ +G + KA M NA WR ++
Sbjct: 251 EDAEEFFEVMP----MKPVIA-CNAMIVGFGEVGEISKARRVFDLMEDRDNAT-WRGMIK 304
Query: 467 ACSIHG 472
A G
Sbjct: 305 AYERKG 310
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 138/341 (40%), Gaps = 36/341 (10%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A R+F + D + +I+ F QM++ V P S L A
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ-GVRPSFPSLISILSVCA 342
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
SL+ G Q+H R FD V+V + L++MY +CG+ A+ VFD +++ WN+
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402
Query: 197 AVTACFRCGDVAGARGVFGRMP----VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKD 252
++ G A +F MP + N + +L + AG+L +F M K
Sbjct: 403 IISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKF 462
Query: 253 DVS-----WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFG 307
V+ +S + L G D+A + I+P+ +L AC +
Sbjct: 463 CVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT---IKPDATVWGALLGACKTHSRLDLA 519
Query: 308 -----KILHGFMEKSG-FLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGR-SIVSWTS 360
K+ + +G ++ +SS+N + SK G+VA+ + R +V + SW
Sbjct: 520 EVAAKKLFENEPDNAGTYVLLSSINA----SRSKWGDVAVVRKNMRTNNVSKFPGCSWIE 575
Query: 361 IIAGLAM------HGHGEEALQLFH------EMEESGVRPD 389
+ + M H E+A+ L + E+G PD
Sbjct: 576 VGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPD 616
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/661 (36%), Positives = 357/661 (54%), Gaps = 47/661 (7%)
Query: 12 SSGTEEAMSNTLEPRWVSLLSK---CSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAV 68
+SGT +SN E SL+SK C +L KQIH H+ GL KL+
Sbjct: 34 NSGTFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTK 93
Query: 69 TISDALHYALRLFQ--HFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSF 126
YA R+ + F NP F++ +IR + MR+ + P SF
Sbjct: 94 LGVPMDPYARRVIEPVQFRNP--FLWTAVIRGYAIEGKFDEAIAMYGCMRKEE-ITPVSF 150
Query: 127 SFAFALKGVANGGSLKPGTQLHCQAFR-HGFDTHVFVGTTLISMYGECGDSESARRVFDE 185
+F+ LK L G Q H Q FR GF V+VG T+I MY
Sbjct: 151 TFSALLKACGTMKDLNLGRQFHAQTFRLRGF-CFVYVGNTMIDMY--------------- 194
Query: 186 MPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVF 245
+C + AR VF MP R++ SW ++A Y + G + A +F
Sbjct: 195 ----------------VKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 246 SEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASE 305
+P KD V+W+ M+ G A N +A +F + + GIR +EV++ G +SACAQ GAS+
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 306 FGKILHGFMEKSGFLYISSV--NNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIA 363
+ +KSG+ V +ALID YSKCGNV A VF +M+ +++ +++S+I
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMIL 357
Query: 364 GLAMHGHGEEALQLFHEM-EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGI 422
GLA HG +EAL LFH M ++ ++P+ +TF+ L ACSHSGLV+QG ++F M +G+
Sbjct: 358 GLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGV 417
Query: 423 EPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKA 482
+PT +HY CMVDL GR RL +A E I M + P+ +W LLGAC IH N E+AE+
Sbjct: 418 QPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAE 477
Query: 483 RLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWS-MIEINKVMYGF 541
L E++P+ G+++LLSNVYA AG W V+ +R+ + E+ + KTP S +++ N M+ F
Sbjct: 478 HLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKF 537
Query: 542 VAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAA 601
G + ++ + DKL E++ RL GY P + V +D+ + K + +H+EKLA A
Sbjct: 538 FPGNLNHPMSNKIQDKLEELVERLTV-LGYQPDLSSVPYDVSDNAKRLILIQHTEKLALA 596
Query: 602 FGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDY 661
F + + + I+KNLR+C DCH M+L S+ II+RD RFH F+ G CSC D+
Sbjct: 597 FSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDF 656
Query: 662 W 662
W
Sbjct: 657 W 657
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/626 (36%), Positives = 346/626 (55%), Gaps = 43/626 (6%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A ++F D +N++I F+QM + D + G A
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV-SGIEIDLATIVSVFAGCA 307
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
+ + G +H + F TL+ MY +CGD +SA+ VF EM + +VV++ +
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 197 AVTACFRCGDVAGARGVFGRMPVRNLT--------------------------SW----- 225
+ R G A +F M ++ W
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 226 --------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFR 277
N ++ Y K G + A VFSEM +KD +SW+T+I G + N ++A F
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 278 ELLREG-IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
LL E P+E ++ VL ACA A + G+ +HG++ ++G+ V N+L+D Y+KC
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
G + +A ++F +++ + +VSWT +IAG MHG G+EA+ LF++M ++G+ D I+F+SL
Sbjct: 548 GALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISP 456
LYACSHSGLV++G F+ M++ IEPT+EHY C+VD+ R L KAY FI MPI P
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 666
Query: 457 NAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRR 516
+A IW LL C IH +++LAE V ++ E++P N+G +VL++N+YA A KW+ V +R+
Sbjct: 667 DATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRK 726
Query: 517 TMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVR 576
+ ++ + K PG S IEI + FVAG+ N TE LR++ R+ E GY+P +
Sbjct: 727 RIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM-IEEGYSPLTK 785
Query: 577 GVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFY 636
L D EE EKE+++ HSEKLA A GI GK +R+ KNLRVCGDCH + K +SK
Sbjct: 786 YALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLT 845
Query: 637 QVEIIVRDRSRFHLFKDGLCSCRDYW 662
+ EI++RD +RFH FKDG CSCR +W
Sbjct: 846 RREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 186/386 (48%), Gaps = 44/386 (11%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D + L+ A+ SLK G ++ +GF +G+ L MY CGD + A RVF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 184 DEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM--------------------PVRNL- 222
DE+ + WN + + GD +G+ G+F +M +R++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 223 ------------------TSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
+ N ++A Y K + AR+VF EM +D +SW+++I G
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
NG ++ F ++L GI + ++ V + CA + G+ +H K+ F
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 325 VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES 384
N L+D YSKCG++ A+ VFR MS RS+VS+TS+IAG A G EA++LF EMEE
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 385 GVRPDGITFISLLYACSHSGLVEQGCEIFSKMK-NLYGIEPTIEHYGCMVDLYGRAARLH 443
G+ PD T ++L C+ L+++G + +K N G + + + ++D+Y + +
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQ 449
Query: 444 KAYEFICQMPISPNAVIWRTLLGACS 469
+A +M + + + W T++G S
Sbjct: 450 EAELVFSEMRV-KDIISWNTIIGGYS 474
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/645 (36%), Positives = 350/645 (54%), Gaps = 72/645 (11%)
Query: 21 NTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPL-FFGKLLLHCAVTISDA-LHYAL 78
NT P + L+SKC+SL+ QI Y H + F KL+ C + +++ + YA
Sbjct: 28 NTQNP--ILLISKCNSLRELMQIQA--YAIKSHIEDVSFVAKLINFCTESPTESSMSYAR 83
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
LF+ PD ++N++ R F+++ + PD+++F LK A
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE-DGILPDNYTFPSLLKACAVA 142
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
+L+ G QLHC + + G D +V+V TLI+MY E
Sbjct: 143 KALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTE-------------------------- 176
Query: 199 TACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWST 258
C DV AR VF R+ + +N
Sbjct: 177 -----CEDVDSARCVFDRIVEPCVVCYN-------------------------------A 200
Query: 259 MIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG 318
MI G A ++A FRE+ + ++PNE++L VLS+CA G+ + GK +H + +K
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 319 FLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLF 378
F VN ALID ++KCG++ A +F M + +W+++I A HG E+++ +F
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRY-KDTQAWSAMIVAYANHGKAEKSMLMF 319
Query: 379 HEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGR 438
M V+PD ITF+ LL ACSH+G VE+G + FS+M + +GI P+I+HYG MVDL R
Sbjct: 320 ERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSR 379
Query: 439 AARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLL 498
A L AYEFI ++PISP ++WR LL ACS H N++LAE V R+ E+D ++ GD+V+L
Sbjct: 380 AGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVIL 439
Query: 499 SNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKL 558
SN+YA KW+ V S+R+ M ++ VK PG S IE+N V++ F +G+ T + H L
Sbjct: 440 SNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRAL 499
Query: 559 REIMLRLRAEAGYAPQVRGVLH-DIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVK 617
E++ L+ +GY P V+H ++ ++EKE ++ HSEKLA FG+ P G +R+VK
Sbjct: 500 DEMVKELKL-SGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVK 558
Query: 618 NLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
NLRVC DCH KLIS + ++++RD RFH F+DG CSC D+W
Sbjct: 559 NLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/580 (39%), Positives = 324/580 (55%), Gaps = 43/580 (7%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
DS + L G G +H + +HG ++ +FV LI +Y E G ++VF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 184 DEMPEPNVVTWNAAVTA-------------------------CF----------RCGDVA 208
D M ++++WN+ + A C + GD+
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 209 GARGVFGRMP-----VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGL 263
R V G + ++T N ++ Y K G + AR VF+ +P D +SW+T+I G
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 264 AHNGSFDQAFGFFRELLREG-IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
A NG +A + + EG I N+ + VL AC+QAGA G LHG + K+G
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
V +L D Y KCG + A +F + S V W ++IA HGHGE+A+ LF EM
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNS-VPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
+ GV+PD ITF++LL ACSHSGLV++G F M+ YGI P+++HYGCMVD+YGRA +L
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQL 604
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVY 502
A +FI M + P+A IW LL AC +HGN++L ++ L E++P + G HVLLSN+Y
Sbjct: 605 ETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMY 664
Query: 503 AVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIM 562
A AGKW+ V IR + + KTPGWS +E++ + F G + + + EE + +L +
Sbjct: 665 ASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQ 724
Query: 563 LRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVC 622
+L+ GY P R VL D+E++EKE + HSE+LA AF + P +RI KNLRVC
Sbjct: 725 AKLKM-IGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVC 783
Query: 623 GDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
GDCH+V K ISK + EIIVRD +RFH FK+G+CSC DYW
Sbjct: 784 GDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 230/508 (45%), Gaps = 53/508 (10%)
Query: 29 SLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLL-LHCAV-TISDALHYALRLFQHFPN 86
+L C++L+ K +H L V+ + KL+ L+C + ++ A H F H N
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARH----TFDHIQN 114
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
D + +N +I F + PD +F LK ++ G +
Sbjct: 115 RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNK 171
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV-------- 198
+HC A + GF V+V +LI +Y +AR +FDEMP ++ +WNA +
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 199 -----------------------TACFRCGDVAGARGVFGRMPVRNLTS----WNVMLAG 231
+AC GD + L S N ++
Sbjct: 232 AKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y + G L ++VF M ++D +SW+++I N +A F+E+ I+P+ ++L
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSG-FLYISSVNNALIDTYSKCGNVAMAQLVFRNMS 350
+ S +Q G + + GF + G FL ++ NA++ Y+K G V A+ VF N
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF-NWL 410
Query: 351 VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG-VRPDGITFISLLYACSHSGLVEQG 409
++SW +II+G A +G EA+++++ MEE G + + T++S+L ACS +G + QG
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 410 CEIFSK-MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGAC 468
++ + +KN G+ + + D+YG+ RL A Q+P N+V W TL+
Sbjct: 471 MKLHGRLLKN--GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACH 527
Query: 469 SIHGNIELAELVKARLAEMDPNNSGDHV 496
HG+ E A ++ + +D DH+
Sbjct: 528 GFHGHGEKAVMLFKEM--LDEGVKPDHI 553
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 208/475 (43%), Gaps = 53/475 (11%)
Query: 198 VTACFR-CGDVAGARGVFGRMPV----RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKD 252
V FR C ++ A+ + R+ V +N+ ++ Y G + LAR F + +D
Sbjct: 57 VHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 253 DVSWSTMIVGLAHNGSFDQAFGFFRE-LLREGIRPNEVSLTGVLSACAQAGASEFGKILH 311
+W+ MI G G+ + F +L G+ P+ + VL AC G +H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIH 173
Query: 312 GFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHG 371
K GF++ V +LI YS+ V A+++F M V R + SW ++I+G G+
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPV-RDMGSWNAMISGYCQSGNA 232
Query: 372 EEALQLFHEMEESGVRP-DGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYG 430
+EAL L +G+R D +T +SLL AC+ +G +G I S +G+E +
Sbjct: 233 KEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSN 286
Query: 431 CMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGN--IELAELVKARLAEMD 488
++DLY RL + +M + + + W +++ A ++ ++ + RL+ +
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345
Query: 489 PNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEIN-----KVMY---G 540
P D + L ++ ++ + D IR + Q GW + +I VMY G
Sbjct: 346 P----DCLTLISLASILSQLGD---IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 541 FVAGEKPNEVTEEAHDKLR-EIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHS--EK 597
V + D + ++ A+ G+A + +++I EEE E + ++ +
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE-MYNIMEEEGEIAANQGTWVSV 457
Query: 598 LAAAFGIAKLPKGKQL--RIVKN------------LRVCGDCHTVMKLISKFYQV 638
L A L +G +L R++KN + G C + +S FYQ+
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 122/308 (39%), Gaps = 17/308 (5%)
Query: 16 EEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHP-LFFGKLLLHCAVTISDA- 73
+E + ++P ++L+S S L I V G F + + AV + A
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 74 ---LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAF 130
+ A +F PN D +NT+I + M + + ++
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 131 ALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPN 190
L + G+L+ G +LH + ++G VFV T+L MYG+CG E A +F ++P N
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 191 VVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYTKAGELGLARRVFS 246
V WN + G A +F M + ++ +L+ + +G + + F
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 247 EMPLKDDVS-----WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQA 301
M ++ + M+ G + A F + + ++P+ +LSAC
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSACRVH 633
Query: 302 GASEFGKI 309
G + GKI
Sbjct: 634 GNVDLGKI 641
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/581 (39%), Positives = 326/581 (56%), Gaps = 49/581 (8%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD+FSF F LK A+ G QLHC + G +T FV T LISMY +CG AR+V
Sbjct: 51 PDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKV 110
Query: 183 FDEMPEPN--VVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG--------- 231
F+E P+ + V +NA ++ V A +F RM ++ +V + G
Sbjct: 111 FEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPE 170
Query: 232 ------------------------------YTKAGELGLARRVFSEMPLKDDVSWSTMIV 261
Y K G + RR+F EMP+K ++W+ +I
Sbjct: 171 YLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVIS 230
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLY 321
G + NG + ++ G+ P+ +L VLS+CA GA + G + +E +GF+
Sbjct: 231 GYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP 290
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
V+NA I Y++CGN+A A+ VF M V +S+VSWT++I MHG GE L LF +M
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPV-KSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR 441
+ G+RPDG F+ +L ACSHSGL ++G E+F MK Y +EP EHY C+VDL GRA R
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409
Query: 442 LHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNV 501
L +A EFI MP+ P+ +W LLGAC IH N+++AEL A++ E +PNN G +VL+SN+
Sbjct: 410 LDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNI 469
Query: 502 YAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREI 561
Y+ + + + IR M E++ K PG+S +E ++ F+AG++ +E TEE H L E+
Sbjct: 470 YSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Query: 562 MLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRV 621
+ AG RG EE + +HSE+LA AFGI G ++ ++KNLRV
Sbjct: 530 ETSVMELAGNMDCDRG-------EEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRV 582
Query: 622 CGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
C DCH +K +SK + +VRD SRFH FKDG+CSC+DYW
Sbjct: 583 CEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 191/466 (40%), Gaps = 70/466 (15%)
Query: 30 LLSKCSSLK---PTKQIHTHLYVTGLHTHPLFFGKLL-LHCAVTISDALHYALRLFQHFP 85
+L C+SL +Q+H H+ G T P L+ ++C + + A ++F+ P
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGL---VADARKVFEENP 115
Query: 86 NPD--TFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKP 143
+ YN LI + F +M+ V DS + + L
Sbjct: 116 QSSQLSVCYNALISGYTANSKVTDAAYMFRRMK-ETGVSVDSVTMLGLVPLCTVPEYLWL 174
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
G LH Q + G D+ V V + I+MY +CG E+ RR+FDEMP ++TWNA ++ +
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ 234
Query: 204 CG---DV----------------------------AGARGV---FGRMP-----VRNLTS 224
G DV GA+ + G++ V N+
Sbjct: 235 NGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFV 294
Query: 225 WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
N ++ Y + G L AR VF MP+K VSW+ MI +G + F ++++ GI
Sbjct: 295 SNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI 354
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN-NALIDTYSKCGNVAMAQ 343
RP+ VLSAC+ +G ++ G L M++ L + + L+D + G + A
Sbjct: 355 RPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAM 414
Query: 344 LVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHS 403
+M V W +++ +H + + A F ++ E P+ I + L+
Sbjct: 415 EFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLM------ 466
Query: 404 GLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFI 449
I+S KN GI + V + RA R Y ++
Sbjct: 467 ------SNIYSDSKNQEGI------WRIRVMMRERAFRKKPGYSYV 500
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 7/239 (2%)
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
W+ + LA+ F ++ +R +LR G P+ S +L +CA G+ LH +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 316 KSGFLYISSVNNALIDTYSKCGNVAMAQLVF-RNMSVGRSIVSWTSIIAGLAMHGHGEEA 374
K G V ALI Y KCG VA A+ VF N + V + ++I+G + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 375 LQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVD 434
+F M+E+GV D +T + L+ C+ + G + + G++ + +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEVAVLNSFIT 199
Query: 435 LYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG----NIELAELVKARLAEMDP 489
+Y + + +MP+ + W ++ S +G +EL E +K+ DP
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVK-GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/655 (35%), Positives = 359/655 (54%), Gaps = 38/655 (5%)
Query: 30 LLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDT 89
+L ++ + +H+ + + L + G L+ ++ D + A ++F P +
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNS-SLGVKLMRAYASLKD-VASARKVFDEIPERNV 105
Query: 90 FMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHC 149
+ N +IR F M V PD ++F LK + G++ G ++H
Sbjct: 106 IIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT---------- 199
A + G + +FVG L+SMYG+CG AR V DEM +VV+WN+ V
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDD 224
Query: 200 ACFRCGDVAGAR-----GVFGRM--PVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKD 252
A C ++ + G + V N T+ NVM Y K +F +M K
Sbjct: 225 ALEVCREMESVKISHDAGTMASLLPAVSNTTTENVM---YVKD--------MFFKMGKKS 273
Query: 253 DVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHG 312
VSW+ MI N +A + + +G P+ VS+T VL AC A GK +HG
Sbjct: 274 LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHG 333
Query: 313 FMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGE 372
++E+ + + NALID Y+KCG + A+ VF NM R +VSWT++I+ G G
Sbjct: 334 YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMISAYGFSGRGC 392
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCM 432
+A+ LF ++++SG+ PD I F++ L ACSH+GL+E+G F M + Y I P +EH CM
Sbjct: 393 DAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACM 452
Query: 433 VDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNS 492
VDL GRA ++ +AY FI M + PN +W LLGAC +H + ++ L +L ++ P S
Sbjct: 453 VDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS 512
Query: 493 GDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTE 552
G +VLLSN+YA AG+W++V +IR M + + K PG S +E+N++++ F+ G++ + ++
Sbjct: 513 GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSD 572
Query: 553 EAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQ 612
E + +L +++++ E GY P LHD+EEE+KE ++ HSEKLA F + + ++
Sbjct: 573 EIYREL-DVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEE 631
Query: 613 -----LRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+RI KNLR+CGDCH KLIS+ EII+RD +RFH+F+ G+CSC DYW
Sbjct: 632 DSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/540 (37%), Positives = 324/540 (60%), Gaps = 6/540 (1%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D+ + + G+ G + ++ F + V TT+++ YG+ + AR++F
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREI----FDEMSERSVITWTTMVTGYGQNNRVDDARKIF 226
Query: 184 DEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARR 243
D MPE V+W + + + G + A +F MPV+ + + N M++G + GE+ ARR
Sbjct: 227 DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARR 286
Query: 244 VFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGA 303
VF M ++D SW T+I NG +A F + ++G+RP +L +LS CA +
Sbjct: 287 VFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLAS 346
Query: 304 SEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIA 363
GK +H + + F V + L+ Y KCG + ++L+F + I+ W SII+
Sbjct: 347 LHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIIS 405
Query: 364 GLAMHGHGEEALQLFHEMEESG-VRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGI 422
G A HG GEEAL++F EM SG +P+ +TF++ L ACS++G+VE+G +I+ M++++G+
Sbjct: 406 GYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGV 465
Query: 423 EPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKA 482
+P HY CMVD+ GRA R ++A E I M + P+A +W +LLGAC H +++AE
Sbjct: 466 KPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAK 525
Query: 483 RLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFV 542
+L E++P NSG ++LLSN+YA G+W DV +R+ M + + K+PG S E+ ++ F
Sbjct: 526 KLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFT 585
Query: 543 AGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAF 602
G + +E+ K+ + + L EAGY P LHD++EEEK +S+ HSE+LA A+
Sbjct: 586 RGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAY 645
Query: 603 GIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+ KL +G +R++KNLRVC DCHT +K+ISK + EII+RD +RFH F++G CSC+DYW
Sbjct: 646 ALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 163/380 (42%), Gaps = 66/380 (17%)
Query: 157 DTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGR 216
D ++ L+S Y + G+ + AR+VFD MPE NVV+W A V G V A +F +
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 217 MPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
MP +N SW VML G+ + G + A +++ +P KD+++ ++MI GL G D+A F
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 277 RELLREGI---------------------------RPNEVSLTGVLSACAQAGASEFGKI 309
E+ + EVS T +L Q G E +
Sbjct: 196 DEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEE 255
Query: 310 LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHG 369
L M + NA+I + G +A A+ VF +M R+ SW ++I +G
Sbjct: 256 LFEVMPVKPVIAC----NAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVIKIHERNG 310
Query: 370 HGEEALQLFHEMEESGVRPDGITFISLLYACS-----------HSGLVE----------- 407
EAL LF M++ GVRP T IS+L C+ H+ LV
Sbjct: 311 FELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVAS 370
Query: 408 ------QGCEIFSKMKNLYGIEPT--IEHYGCMVDLYGRAARLHKAYEFICQMPIS---- 455
C K K ++ P+ I + ++ Y +A + C+MP+S
Sbjct: 371 VLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTK 430
Query: 456 PNAVIWRTLLGACSIHGNIE 475
PN V + L ACS G +E
Sbjct: 431 PNEVTFVATLSACSYAGMVE 450
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 142/299 (47%), Gaps = 19/299 (6%)
Query: 167 ISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWN 226
I+ G AR++FD ++ +WN+ V F AR +F MP RN+ SWN
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWN 83
Query: 227 VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
+++GY K GE+ AR+VF MP ++ VSW+ ++ G HNG D A F ++ +
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK---- 139
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
N+VS T +L Q G + L+ + + +S +I K G V A+ +F
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS----MIHGLCKEGRVDEAREIF 195
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLV 406
MS RS+++WT+++ G + ++A ++F M E +++ S+L +G +
Sbjct: 196 DEMS-ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRI 250
Query: 407 EQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL 465
E E+F M ++P I M+ G+ + KA M N W+T++
Sbjct: 251 EDAEELFEVMP----VKPVIA-CNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI 303
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 114/298 (38%), Gaps = 69/298 (23%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRH---PTVFPDSFSFAFALK 133
A R+F + + T+I+ FI M++ PT FP S L
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT-FPTLISI---LS 339
Query: 134 GVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVT 193
A+ SL G Q+H Q R FD V+V + L++MY +CG+ ++ +FD P +++
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 194 WNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDD 253
WN+ +++GY G A +VF EMPL
Sbjct: 400 WNS-------------------------------IISGYASHGLGEEALKVFCEMPL--- 425
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
+GS +PNEV+ LSAC+ AG E G ++
Sbjct: 426 ------------SGS---------------TKPNEVTFVATLSACSYAGMVEEGLKIYES 458
Query: 314 MEKS-GFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH 370
ME G I++ ++D + G A + +M+V W S++ H
Sbjct: 459 MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 19/253 (7%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
NV + ++ G++ AR++F K SW++M+ G N A F E+ I
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
+S G++S + G + + + M + + + AL+ Y G V +A+ +
Sbjct: 80 ---ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWT----ALVKGYVHNGKVDVAESL 132
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
F M ++ VSWT ++ G G ++A +L+ + + D I S+++ G
Sbjct: 133 FWKMP-EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGR 187
Query: 406 VEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL 465
V++ EIF +M E ++ + MV YG+ R+ A + MP V W ++L
Sbjct: 188 VDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSML 241
Query: 466 GACSIHGNIELAE 478
+G IE AE
Sbjct: 242 MGYVQNGRIEDAE 254
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/585 (37%), Positives = 327/585 (55%), Gaps = 47/585 (8%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P ++ + + SL ++H +G D F+ T LI MY + G + AR+V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP------------------VRNLTS 224
FD+ + + WNA A G G++ +M V + +
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 225 WNVMLAG-------------------------YTKAGELGLARRVFSEMPLKDDVSWSTM 259
N ++ G Y + G + A VF MP+++ VSWS M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 260 IVGLAHNGSFDQAFGFFRELLRE--GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS 317
I A NG +A FRE++RE PN V++ VL ACA A E GK++HG++ +
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 318 GFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQL 377
G I V +AL+ Y +CG + + Q VF M R +VSW S+I+ +HG+G++A+Q+
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMH-DRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 378 FHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYG 437
F EM +G P +TF+S+L ACSH GLVE+G +F M +GI+P IEHY CMVDL G
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 438 RAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVL 497
RA RL +A + + M P +W +LLG+C IHGN+ELAE RL ++P N+G++VL
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 493
Query: 498 LSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDK 557
L+++YA A W +V +++ + + + K PG +E+ + MY FV+ ++ N + E+ H
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAF 553
Query: 558 LREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVK 617
L ++ ++ E GY PQ +GVL+++E EEKE V HSEKLA AFG+ KG+ +RI K
Sbjct: 554 LVKLAEDMK-EKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITK 612
Query: 618 NLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
NLR+C DCH K ISKF + EI+VRD +RFH FK+G+CSC DYW
Sbjct: 613 NLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 154/388 (39%), Gaps = 53/388 (13%)
Query: 35 SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISD--ALHYALRLFQHFPNPDTFMY 92
SSL ++H H+ G P KL+ SD ++ YA ++F +++
Sbjct: 91 SSLSDALRVHRHILDNGSDQDPFLATKLI----GMYSDLGSVDYARKVFDKTRKRTIYVW 146
Query: 93 NTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG----GSLKPGTQLH 148
N L R + +M R V D F++ + LK L G ++H
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNR-IGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205
Query: 149 CQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT--------- 199
R G+ +HV++ TTL+ MY G + A VF MP NVV+W+A +
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 200 ----------------------------ACFRCGDVAGARGVFGRMPVRNLTSW----NV 227
AC + + + G + R L S +
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
++ Y + G+L + +RVF M +D VSW+++I +G +A F E+L G P
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPT 385
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNA-LIDTYSKCGNVAMAQLVF 346
V+ VL AC+ G E GK L M + + + A ++D + + A +
Sbjct: 386 PVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMV 445
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEA 374
++M W S++ +HG+ E A
Sbjct: 446 QDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 98/254 (38%), Gaps = 42/254 (16%)
Query: 224 SWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREG 283
S N ++ K G+L A RV S+ ++ +I+ H S A R +L G
Sbjct: 48 SNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 284 IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQ 343
++ FL LI YS G+V A+
Sbjct: 108 ------------------------------SDQDPFL-----ATKLIGMYSDLGSVDYAR 132
Query: 344 LVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHS 403
VF + + R+I W ++ L + GHGEE L L+ +M GV D T+ +L AC S
Sbjct: 133 KVF-DKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVAS 191
Query: 404 GL----VEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAV 459
+ +G EI + + G + +VD+Y R + A MP+ N V
Sbjct: 192 ECTVNHLMKGKEIHAHLTR-RGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVV 249
Query: 460 IWRTLLGACSIHGN 473
W ++ + +G
Sbjct: 250 SWSAMIACYAKNGK 263
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/688 (34%), Positives = 363/688 (52%), Gaps = 53/688 (7%)
Query: 21 NTLEP---RWVSLLSKC---SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDAL 74
+ +EP + LL C + L+ K+IH L +G F L +
Sbjct: 129 DDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD--LFAMTGLENMYAKCRQV 186
Query: 75 HYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKG 134
+ A ++F P D +NT++ ++ + P + L
Sbjct: 187 NEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE-MVKSMCEENLKPSFITIVSVLPA 245
Query: 135 VANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTW 194
V+ + G ++H A R GFD+ V + T L+ MY +CG E+AR++FD M E NVV+W
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 195 NA-----------------------------------AVTACFRCGDVAGARGVFGRMPV 219
N+ A+ AC GD+ R + ++ V
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH-KLSV 364
Query: 220 -----RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFG 274
RN++ N +++ Y K E+ A +F ++ + VSW+ MI+G A NG A
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALN 424
Query: 275 FFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYS 334
+F ++ ++P+ + V++A A+ + K +HG + +S V AL+D Y+
Sbjct: 425 YFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYA 484
Query: 335 KCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFI 394
KCG + +A+L+F MS R + +W ++I G HG G+ AL+LF EM++ ++P+G+TF+
Sbjct: 485 KCGAIMIARLIFDMMS-ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFL 543
Query: 395 SLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI 454
S++ ACSHSGLVE G + F MK Y IE +++HYG MVDL GRA RL++A++FI QMP+
Sbjct: 544 SVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPV 603
Query: 455 SPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSI 514
P ++ +LGAC IH N+ AE RL E++P++ G HVLL+N+Y A W+ V +
Sbjct: 604 KPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQV 663
Query: 515 RRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQ 574
R +M Q + KTPG SM+EI ++ F +G + +++ + L +++ ++ EAGY P
Sbjct: 664 RVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK-EAGYVPD 722
Query: 575 VRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISK 634
VL +E + KE +S HSEKLA +FG+ G + + KNLRVC DCH K IS
Sbjct: 723 TNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISL 781
Query: 635 FYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
EI+VRD RFH FK+G CSC DYW
Sbjct: 782 VTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 235/548 (42%), Gaps = 85/548 (15%)
Query: 8 IPTPSSGTEEAMS-------NTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFG 60
IP P S +S N E LL +CSSLK +QI ++ GL+ F
Sbjct: 14 IPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQT 73
Query: 61 KLL-LHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHP 119
KL+ L C D A R+F+ + +Y+T+++ F++MR +
Sbjct: 74 KLVSLFCRYGSVDE---AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMR-YD 129
Query: 120 TVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESA 179
V P ++F + LK + L+ G ++H + GF +F T L +MY +C A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 180 RRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG-------- 231
R+VFD MPE ++V+WN V + G A + M NL + +
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 232 -------------------------------YTKAGELGLARRVFSEMPLKDDVSWSTMI 260
Y K G L AR++F M ++ VSW++MI
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 261 VGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFL 320
N + +A F+++L EG++P +VS+ G L ACA G E G+ +H + G
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369
Query: 321 YISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHE 380
SV N+LI Y KC V A +F + R++VSW ++I G A +G +AL F +
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQ-SRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 381 MEESGVRPDGITFISLLYACSH----------SGLVEQGC---EIF--SKMKNLYG---- 421
M V+PD T++S++ A + G+V + C +F + + ++Y
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 422 -----------IEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PISPNAVIWRTLLGA 467
E + + M+D YG A E +M I PN V + +++ A
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 468 CSIHGNIE 475
CS G +E
Sbjct: 549 CSHSGLVE 556
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 125/260 (48%), Gaps = 5/260 (1%)
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
+++ + + G + A RVF + K +V + TM+ G A D+A FF + + + P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR 347
+ T +L C GK +HG + KSGF L + Y+KC V A+ VF
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 348 NMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVE 407
M R +VSW +I+AG + +G AL++ M E ++P IT +S+L A S L+
Sbjct: 195 RMP-ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 408 QGCEIFS-KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLG 466
G EI M++ G + + +VD+Y + L A + M + N V W +++
Sbjct: 254 VGKEIHGYAMRS--GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMID 310
Query: 467 ACSIHGNIELAELVKARLAE 486
A + N + A L+ ++ +
Sbjct: 311 AYVQNENPKEAMLIFQKMLD 330
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/662 (36%), Positives = 350/662 (52%), Gaps = 49/662 (7%)
Query: 42 QIHTHLYVTGL-HTHPLFFG--KLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRX 98
Q+HT + GL T P+ L L C + A LF +N++I
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCG-----NVRKARILFDKTEVKSVVTWNSMISG 269
Query: 99 XXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDT 158
F MR + +S SFA +K AN L+ QLHC ++GF
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSES-SFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 159 HVFVGTTLISMYGECGDSESARRVFDEMP-EPNVVTWNAAVTACFRCGDVAGARGVFGRM 217
+ T L+ Y +C A R+F E+ NVV+W A ++ + A +F M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 218 -------------------PV----------------RNLTSWNVMLAGYTKAGELGLAR 242
PV R+ T +L Y K G++ A
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 243 RVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG 302
+VFS + KD V+WS M+ G A G + A F EL + GI+PNE + + +L+ CA
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 303 ASE-FGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSI 361
AS GK HGF KS V++AL+ Y+K GN+ A+ VF+ + +VSW S+
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSM 567
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYG 421
I+G A HG +AL +F EM++ V+ DG+TFI + AC+H+GLVE+G + F M
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 422 IEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVK 481
I PT EH CMVDLY RA +L KA + I MP + IWRT+L AC +H EL L
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 687
Query: 482 ARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGF 541
++ M P +S +VLLSN+YA +G W++ +R+ M E+++ K PG+S IE+ Y F
Sbjct: 688 EKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSF 747
Query: 542 VAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAA 601
+AG++ + + ++ + KL ++ RL+ + GY P VL DI++E KE +++HSE+LA A
Sbjct: 748 LAGDRSHPLKDQIYMKLEDLSTRLK-DLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIA 806
Query: 602 FGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLF-KDGLCSCRD 660
FG+ PKG L I+KNLRVCGDCH V+KLI+K + EI+VRD +RFH F DG+CSC D
Sbjct: 807 FGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGD 866
Query: 661 YW 662
+W
Sbjct: 867 FW 868
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 227/511 (44%), Gaps = 70/511 (13%)
Query: 35 SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHY--------ALRLFQHFPN 86
S LK + + L+ LH + FG L +V S Y ++F
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFG-FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE 156
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
+ + TLI F++M+ T P+SF+FA AL +A G G Q
Sbjct: 157 RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ-PNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
+H ++G D + V +LI++Y +CG+ AR +FD+ +VVTWN+ ++ G
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 207 VAGARGVFGRMPVR-----------------NLTSW----------------------NV 227
A G+F M + NL
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 228 MLAGYTKAGELGLARRVFSEMP-LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
++ Y+K + A R+F E+ + + VSW+ MI G N ++A F E+ R+G+RP
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
NE + + +L+A SE +H + K+ + S+V AL+D Y K G V A VF
Sbjct: 396 NEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL- 405
+ + IV+W++++AG A G E A+++F E+ + G++P+ TF S+L C+ +
Sbjct: 452 SGID-DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 406 VEQGCEIFSKMKNLYGIEPTIEHYGC----MVDLYGRAARLHKAYEFICQMPISPNAVIW 461
+ QG K + + I+ ++ C ++ +Y + + A E + + + V W
Sbjct: 511 MGQG-----KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE-VFKRQREKDLVSW 564
Query: 462 RTLLGACSIHGN----IELAELVKARLAEMD 488
+++ + HG +++ + +K R +MD
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 199/458 (43%), Gaps = 47/458 (10%)
Query: 60 GKLLLHCAVTISDA-LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRH 118
++ ++C T+S + L+ A LF P D Y +L+ F+ + R
Sbjct: 28 AQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRL 87
Query: 119 PTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSES 178
D F+ LK A G QLHCQ + GF V VGT+L+ Y + + +
Sbjct: 88 GMEM-DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 179 ARRVFDEMPEPNVVTWNAAVTACFRCG----------------------------DVAGA 210
R+VFDEM E NVVTW ++ R V
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 211 RGVFGR------MPVRN-----LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTM 259
GV GR + V+N + N ++ Y K G + AR +F + +K V+W++M
Sbjct: 207 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGF 319
I G A NG +A G F + +R +E S V+ CA F + LH + K GF
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF 326
Query: 320 LYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
L+ ++ AL+ YSKC + A +F+ + ++VSWT++I+G + EEA+ LF
Sbjct: 327 LFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFS 386
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRA 439
EM+ GVRP+ T+ +L A E ++ +K Y T+ ++D Y +
Sbjct: 387 EMKRKGVRPNEFTYSVILTALPVISPSEVHAQV---VKTNYERSSTVGT--ALLDAYVKL 441
Query: 440 ARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
++ +A + + + V W +L + G E A
Sbjct: 442 GKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETEAA 478
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/675 (35%), Positives = 365/675 (54%), Gaps = 57/675 (8%)
Query: 37 LKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAV---TISDALHYALRLFQHFPNPDTFMYN 93
LK +++H H+ TGL + G L++ +I+DA R+F + D+ +N
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR----RVFYFMTDKDSVSWN 384
Query: 94 TLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFR 153
++I + MRRH + P SF+ +L A+ K G Q+H ++ +
Sbjct: 385 SMITGLDQNGCFIEAVERYKSMRRHD-ILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Query: 154 HGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA------------- 200
G D +V V L+++Y E G R++F MPE + V+WN+ + A
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503
Query: 201 CFRCGDVAGAR------------------GVFGR----MPVRN-----LTSWNVMLAGYT 233
CF AG + G G+ + ++N T+ N ++A Y
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 234 KAGELGLARRVFSEMP-LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLT 292
K GE+ ++FS M +D+V+W++MI G HN +A +L+ G R +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 293 GVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVG 352
VLSA A E G +H ++ V +AL+D YSKCG + A F M V
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV- 682
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG-VRPDGITFISLLYACSHSGLVEQGCE 411
R+ SW S+I+G A HG GEEAL+LF M+ G PD +TF+ +L ACSH+GL+E+G +
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK 742
Query: 412 IFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIH 471
F M + YG+ P IEH+ CM D+ GRA L K +FI +MP+ PN +IWRT+LGAC
Sbjct: 743 HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC-CR 801
Query: 472 GNIELAELVKAR---LAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPG 528
N AEL K L +++P N+ ++VLL N+YA G+W+D+V R+ M + + K G
Sbjct: 802 ANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAG 861
Query: 529 WSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKE 588
+S + + ++ FVAG+K + + + KL+E+ ++R +AGY PQ L+D+E+E KE
Sbjct: 862 YSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR-DAGYVPQTGFALYDLEQENKE 920
Query: 589 DSVSKHSEKLAAAFGI-AKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSR 647
+ +S HSEKLA AF + A+ +RI+KNLRVCGDCH+ K ISK +II+RD +R
Sbjct: 921 EILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNR 980
Query: 648 FHLFKDGLCSCRDYW 662
FH F+DG CSC D+W
Sbjct: 981 FHHFQDGACSCSDFW 995
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 115/215 (53%), Gaps = 14/215 (6%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N ++ Y + G+ AR+VF EMPL++ VSW+ ++ G + NG +A F R++++EGI
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 286 PNEVSLTGVLSACAQAGASE--FGKILHGFMEKSGFLYISSVNNALIDTYSKC-GNVAMA 342
N+ + VL AC + G+ FG+ +HG M K + + V+N LI Y KC G+V A
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYA 159
Query: 343 QLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLL-YACS 401
F ++ V S VSW SII+ + G A ++F M+ G RP TF SL+ ACS
Sbjct: 160 LCAFGDIEVKNS-VSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLY 436
L E + + I TI+ G + DL+
Sbjct: 219 ---LTEPDVRLLEQ------IMCTIQKSGLLTDLF 244
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 177/397 (44%), Gaps = 54/397 (13%)
Query: 121 VFPDSFSFAFALKGVANGGSLKP--GTQLHCQAFRHGFDTHVFVGTTLISMYGEC-GDSE 177
+F + ++F L+ GS+ G Q+H F+ + V LISMY +C G
Sbjct: 98 IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVG 157
Query: 178 SARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----------------- 220
A F ++ N V+WN+ ++ + GD A +F M
Sbjct: 158 YALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC 217
Query: 221 NLTSWNV------------------------MLAGYTKAGELGLARRVFSEMPLKDDVSW 256
+LT +V +++ + K+G L AR+VF++M ++ V+
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277
Query: 257 STMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASE-----FGKILH 311
+ ++VGL ++A F ++ I + S +LS+ + +E G+ +H
Sbjct: 278 NGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVH 336
Query: 312 GFMEKSGFL-YISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH 370
G + +G + ++ + N L++ Y+KCG++A A+ VF M+ + VSW S+I GL +G
Sbjct: 337 GHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNGC 395
Query: 371 GEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYG 430
EA++ + M + P T IS L +C+ + G +I + L GI+ +
Sbjct: 396 FIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL-GIDLNVSVSN 454
Query: 431 CMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA 467
++ LY L++ + MP + V W +++GA
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 182/417 (43%), Gaps = 64/417 (15%)
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR--- 203
H + +++ D V++ LI+ Y E GDS SAR+VFDEMP N V+W V+ R
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 204 -----------------------------CGDVAGARGVFGRM----------PVRNLTS 224
C ++ +FGR V + S
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 225 WNVMLAGYTKA-GELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREG 283
NV+++ Y K G +G A F ++ +K+ VSW+++I + G AF F + +G
Sbjct: 143 -NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 284 IRPNEVSLTGVLSACAQAGASEFGKILHGFM---EKSGFLYISSVNNALIDTYSKCGNVA 340
RP E + +++ + ++L M +KSG L V + L+ ++K G+++
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDV-RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 341 MAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES-GVRPDGITFISLLYA 399
A+ VF M R+ V+ ++ GL GEEA +LF +M V P+ +++ LL +
Sbjct: 261 YARKVFNQMET-RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSS 317
Query: 400 CSHSGLVEQ-----GCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI 454
L E+ G E+ + ++ + +V++Y + + A M
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT- 376
Query: 455 SPNAVIWRTLLGACSIHGN-IELAELVKA-RLAEMDPNNSGDHVLLSNVYAVAG-KW 508
++V W +++ +G IE E K+ R ++ P G L+S++ + A KW
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP---GSFTLISSLSSCASLKW 430
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/657 (33%), Positives = 340/657 (51%), Gaps = 78/657 (11%)
Query: 81 FQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGS 140
F+ +P + ++IR F++MR PD F LK
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMD 120
Query: 141 LKPGTQLHCQAFRHGFDTHVFVGTTLISMYGE-----------------------CGDSE 177
L+ G +H R G D ++ G L++MY + GD +
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 178 -------------SARRVFDEMPEPNVVTWNAAVTACFRCG------------------- 205
S RRVF+ MP +VV++N + + G
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 206 ----------------DVAGARGVFGRMPVRNLTS----WNVMLAGYTKAGELGLARRVF 245
DV + + G + + + S + ++ Y K+ + + RVF
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 246 SEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASE 305
S + +D +SW++++ G NG +++A FR+++ ++P V+ + V+ ACA
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 306 FGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGL 365
GK LHG++ + GF + +AL+D YSKCGN+ A+ +F M+V VSWT+II G
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE-VSWTAIIMGH 419
Query: 366 AMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPT 425
A+HGHG EA+ LF EM+ GV+P+ + F+++L ACSH GLV++ F+ M +YG+
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 479
Query: 426 IEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLA 485
+EHY + DL GRA +L +AY FI +M + P +W TLL +CS+H N+ELAE V ++
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
Query: 486 EMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGE 545
+D N G +VL+ N+YA G+WK++ +R M ++ + K P S IE+ +GFV+G+
Sbjct: 540 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD 599
Query: 546 KPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIA 605
+ + ++ ++ L+ +M ++ E GY GVLHD++EE K + + HSE+LA AFGI
Sbjct: 600 RSHPSMDKINEFLKAVMEQMEKE-GYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII 658
Query: 606 KLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
G +R+ KN+R+C DCH +K ISK + EIIVRD SRFH F G CSC DYW
Sbjct: 659 NTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 146/354 (41%), Gaps = 44/354 (12%)
Query: 41 KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXX 100
K+IH ++ G+ + ++ G L+ S + + R+F D +N+L+
Sbjct: 262 KEIHGYVIRKGIDS-DVYIGSSLVDMYAK-SARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 101 XXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHV 160
F QM V P + +F+ + A+ +L G QLH R GF +++
Sbjct: 320 QNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 161 FVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR 220
F+ + L+ MY +CG+ ++AR++FD RM V
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFD-------------------------------RMNVL 407
Query: 221 NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFF 276
+ SW ++ G+ G A +F EM + + V++ ++ +H G D+A+G+F
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 467
Query: 277 RELLR-EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSK 335
+ + G+ V +AG E + F+ K SV + L+ + S
Sbjct: 468 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEA---YNFISKMCVEPTGSVWSTLLSSCSV 524
Query: 336 CGNVAMAQLVFRNMSV--GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVR 387
N+ +A+ V + ++ ++ + A +G +E +L M + G+R
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 122/286 (42%), Gaps = 40/286 (13%)
Query: 214 FGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAF 273
F R + TS +++++ YT L A +F + ++W ++I F +A
Sbjct: 31 FIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKAL 90
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
F E+ G P+ VL +C FG+ +HGF+ + G NAL++ Y
Sbjct: 91 ASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMY 150
Query: 334 SK---------CGNV--AMAQ----------------LVFRNMSVGR--------SIVSW 358
+K GNV M Q + F SV R +VS+
Sbjct: 151 AKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSY 210
Query: 359 TSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
+IIAG A G E+AL++ EM + ++PD T S+L S V +G EI +
Sbjct: 211 NTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIR 270
Query: 419 LYGIEPTIEHYGCMVDLYGRAARLHKA----YEFICQMPISPNAVI 460
GI+ + +VD+Y ++AR+ + C+ IS N+++
Sbjct: 271 -KGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/717 (33%), Positives = 361/717 (50%), Gaps = 96/717 (13%)
Query: 35 SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNT 94
SS++ + H VTG ++ +F G L+ + +L A ++F D +N+
Sbjct: 141 SSVRCGESAHALSLVTGFISN-VFVGNALV-AMYSRCRSLSDARKVFDEMSVWDVVSWNS 198
Query: 95 LIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRH 154
+I F +M PD+ + L A+ G+ G QLHC A
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 155 GFDTHVFVGTTLISMYGECG-------------------------------DSESARRVF 183
++FVG L+ MY +CG E A R+F
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 184 DEMPEP----NVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG-------- 231
++M E +VVTW+AA++ + G A GV +M + V L
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378
Query: 232 --------------------------------------YTKAGELGLARRVFSEMPLK-- 251
Y K ++ AR +F + K
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 252 DDVSWSTMIVGLAHNGSFDQAFGFFRELLREG--IRPNEVSLTGVLSACAQAGASEFGKI 309
D V+W+ MI G + +G ++A E+ E RPN +++ L ACA A GK
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 310 LHGF----MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGL 365
+H + + + L++S N LID Y+KCG+++ A+LVF NM + ++ V+WTS++ G
Sbjct: 499 IHAYALRNQQNAVPLFVS---NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGY 554
Query: 366 AMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPT 425
MHG+GEEAL +F EM G + DG+T + +LYACSHSG+++QG E F++MK ++G+ P
Sbjct: 555 GMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPG 614
Query: 426 IEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLA 485
EHY C+VDL GRA RL+ A I +MP+ P V+W L C IHG +EL E ++
Sbjct: 615 PEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKIT 674
Query: 486 EMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGE 545
E+ N+ G + LLSN+YA AG+WKDV IR M + + K PG S +E K F G+
Sbjct: 675 ELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGD 734
Query: 546 KPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIA 605
K + +E + L + M R++ + GY P+ LHD+++EEK+D + +HSEKLA A+GI
Sbjct: 735 KTHPHAKEIYQVLLDHMQRIK-DIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGIL 793
Query: 606 KLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
P+G +RI KNLRVCGDCHT +S+ +II+RD SRFH FK+G CSC+ YW
Sbjct: 794 TTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 148/536 (27%), Positives = 230/536 (42%), Gaps = 94/536 (17%)
Query: 30 LLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDT 89
+ KC ++ K IH L G+ T L L+ +++ L +A+ L + FP D
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILT--LNLTSHLISTYISVG-CLSHAVSLLRRFPPSDA 90
Query: 90 FMY--NTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
+Y N+LIR + F M PD+++F F K S++ G
Sbjct: 91 GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT-PDNYTFPFVFKACGEISSVRCGESA 149
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDV 207
H + GF ++VFVG L++MY C AR+VFDEM +VV+WN+ + + + G
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 208 AGARGVFGRMP----------------------------------------VRNLTSWNV 227
A +F RM ++N+ N
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFD----------------- 270
++ Y K G + A VFS M +KD VSW+ M+ G + G F+
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 271 ------------------QAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHG 312
+A G R++L GI+PNEV+L VLS CA GA GK +H
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 313 F-------MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVG-RSIVSWTSIIAG 364
+ + K+G + V N LID Y+KC V A+ +F ++S R +V+WT +I G
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 365 LAMHGHGEEALQLFHEM--EESGVRPDGITFISLLYACSHSGLVEQGCEIFS-KMKNLYG 421
+ HG +AL+L EM E+ RP+ T L AC+ + G +I + ++N
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 422 IEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
P C++D+Y + + A M ++ N V W +L+ +HG E A
Sbjct: 510 AVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEA 563
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/595 (36%), Positives = 321/595 (53%), Gaps = 55/595 (9%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHG-FDTHVFVGTTLISMYGECGDSESA 179
V PD F+ + L ++ L+ G +LH A ++G D + FVG+ L+ MY C S
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 180 RRVFDEMPEPNVVTWNA------------------------------------AVTACFR 203
RRVFD M + + WNA V AC R
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 204 CGDVAGARGVFGRMPVRNLTS----WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTM 259
G + + G + R L N ++ Y++ G++ +A R+F +M +D V+W+TM
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 260 IVGLAHNGSFDQAFGFFRELL-----------REGIRPNEVSLTGVLSACAQAGASEFGK 308
I G + + A ++ R ++PN ++L +L +CA A GK
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 537
Query: 309 ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMH 368
+H + K+ +V +AL+D Y+KCG + M++ VF + +++++W II MH
Sbjct: 538 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMH 596
Query: 369 GHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEH 428
G+G+EA+ L M GV+P+ +TFIS+ ACSHSG+V++G IF MK YG+EP+ +H
Sbjct: 597 GNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDH 656
Query: 429 YGCMVDLYGRAARLHKAYEFICQMPISPN-AVIWRTLLGACSIHGNIELAELVKARLAEM 487
Y C+VDL GRA R+ +AY+ + MP N A W +LLGA IH N+E+ E+ L ++
Sbjct: 657 YACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQL 716
Query: 488 DPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKP 547
+PN + +VLL+N+Y+ AG W +RR M EQ + K PG S IE ++ FVAG+
Sbjct: 717 EPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSS 776
Query: 548 NEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKL 607
+ +E+ L + R+R E GY P VLH++EE+EKE + HSEKLA AFGI
Sbjct: 777 HPQSEKLSGYLETLWERMRKE-GYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNT 835
Query: 608 PKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
G +R+ KNLRVC DCH K ISK EII+RD RFH FK+G CSC DYW
Sbjct: 836 SPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 185/395 (46%), Gaps = 63/395 (15%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTH-VFVGTTLISMYGECGDSESARR 181
PD+++F LK VA+ ++ G Q+H ++ G+ V V TL+++Y +CGD + +
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 182 VFDEMPEPNVVTWNAAVTA------------CFRC------------------------- 204
VFD + E N V+WN+ +++ FRC
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 205 ------GDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWST 258
G A G+ R N N ++A Y K G+L ++ + +D V+W+T
Sbjct: 215 PEGLMMGKQVHAYGL--RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 259 MIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG 318
++ L N +A + RE++ EG+ P+E +++ VL AC+ GK LH + K+G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 319 FLYISS-VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQL 377
L +S V +AL+D Y C V + VF M R I W ++IAG + + H +EAL L
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 378 FHEMEES-GVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYG--IEPTIEH----YG 430
F MEES G+ + T ++ AC SG FS+ + ++G ++ ++
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSG-------AFSRKEAIHGFVVKRGLDRDRFVQN 444
Query: 431 CMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL 465
++D+Y R ++ A +M + V W T++
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMI 478
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 174/448 (38%), Gaps = 65/448 (14%)
Query: 29 SLLSKCSSL---KPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFP 85
S+L CS L + K++H + G F G L+ L R+F
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS-GRRVFDGMF 365
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGT 145
+ ++N +I FI M + +S + A + G+
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT------ 199
+H + G D FV TL+ MY G + A R+F +M + ++VTWN +T
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 200 ----------------------------------------ACFRCGDVAGARGVFGRMPV 219
+C +A + +
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 220 RNLTS----WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGF 275
NL + + ++ Y K G L ++R+VF ++P K+ ++W+ +I+ +G+ +A
Sbjct: 546 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDL 605
Query: 276 FRELLREGIRPNEVSLTGVLSACAQAGASEFG-KILHGFMEKSGFLYISSVNNALIDTYS 334
R ++ +G++PNEV+ V +AC+ +G + G +I + G S ++D
Sbjct: 606 LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLG 665
Query: 335 KCGNVAMAQLVFRNMSVGRSIV-SWTSIIAGLAMHGH---GEEALQLFHEMEESGVRPDG 390
+ G + A + M + +W+S++ +H + GE A Q ++E P+
Sbjct: 666 RAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE-----PNV 720
Query: 391 IT-FISLLYACSHSGLVEQGCEIFSKMK 417
+ ++ L S +GL ++ E+ MK
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMK 748
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 9/236 (3%)
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
W ++ + +A + +++ GI+P+ + +L A A E GK +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 316 KSGFLYIS-SVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEA 374
K G+ S +V N L++ Y KCG+ VF +S R+ VSW S+I+ L E A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS-ERNQVSWNSLISSLCSFEKWEMA 183
Query: 375 LQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGI---EPTIEHYGC 431
L+ F M + V P T +S++ ACS+ + E + K + YG+ E
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG--LMMGKQVHAYGLRKGELNSFIINT 241
Query: 432 MVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA-CSIHGNIELAELVKARLAE 486
+V +YG+ +L + + + V W T+L + C +E E ++ + E
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/626 (35%), Positives = 331/626 (52%), Gaps = 44/626 (7%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A R+F D+ YNT+I F++ PD + + L+
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE--NLDQFKPDLLTVSSVLRACG 318
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
+ L ++ + GF V LI +Y +CGD +AR VF+ M + V+WN+
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 197 AVTACFRCGDVAGARGVFGRMPVR------------------------------------ 220
++ + GD+ A +F M +
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 221 ---NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFR 277
+L+ N ++ Y K GE+G + ++FS M D V+W+T+I G F
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG 337
++ + + P+ + L CA A GK +H + + G+ + NALI+ YSKCG
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 338 NVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLL 397
+ + VF MS R +V+WT +I M+G GE+AL+ F +ME+SG+ PD + FI+++
Sbjct: 559 CLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAII 617
Query: 398 YACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPN 457
YACSHSGLV++G F KMK Y I+P IEHY C+VDL R+ ++ KA EFI MPI P+
Sbjct: 618 YACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPD 677
Query: 458 AVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRT 517
A IW ++L AC G++E AE V R+ E++P++ G +L SN YA KW V IR++
Sbjct: 678 ASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKS 737
Query: 518 MTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRG 577
+ ++ + K PG+S IE+ K ++ F +G+ +E + L EI+ L A+ GY P R
Sbjct: 738 LKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSL-EILYSLMAKEGYIPDPRE 796
Query: 578 VLHDI-EEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFY 636
V ++ EEEEK + HSE+LA AFG+ G L+++KNLRVCGDCH V KLISK
Sbjct: 797 VSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIV 856
Query: 637 QVEIIVRDRSRFHLFKDGLCSCRDYW 662
EI+VRD +RFHLFKDG CSC+D W
Sbjct: 857 GREILVRDANRFHLFKDGTCSCKDRW 882
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 239/525 (45%), Gaps = 61/525 (11%)
Query: 31 LSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHY-----ALRLFQHF- 84
LS S+L ++IH + GL + F GKL I H+ +L +F+
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKL-------IDKYSHFREPASSLSVFRRVS 66
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
P + +++N++IR + ++R V PD ++F +K A + G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLR-ESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRC 204
++ Q GF++ +FVG L+ MY G AR+VFDEMP ++V+WN+ ++
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 205 G----------------------DVAGARGVFGRMPV-----------------RNLTSW 225
G V+ FG + V +
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N ++A Y K ARRVF EM ++D VS++TMI G +++ F E L + +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FK 304
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
P+ ++++ VL AC K ++ +M K+GF+ S+V N LID Y+KCG++ A+ V
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
F +M + VSW SII+G G EA++LF M + D IT++ L+ +
Sbjct: 365 FNSMEC-KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 406 VEQGCEIFSK-MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
++ G + S +K+ I+ ++ + ++D+Y + + + + M + + V W T+
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTV 480
Query: 465 LGACSIHGNIE--LAELVKARLAEMDPNNSGDHVLLSNVYAVAGK 507
+ AC G+ L + R +E+ P+ + V L ++A K
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 186/426 (43%), Gaps = 48/426 (11%)
Query: 127 SFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM 186
S F + +++ +L ++H G D+ F LI Y + S+ VF +
Sbjct: 6 SSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65
Query: 187 -PEPNVVTWNAAVTACFRCGDVAGARGVFGRM------PVR------------------- 220
P NV WN+ + A + G A +G++ P +
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 221 --------------NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHN 266
+L N ++ Y++ G L AR+VF EMP++D VSW+++I G + +
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 267 GSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN 326
G +++A + EL I P+ +++ VL A + G+ LHGF KSG + VN
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 327 NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGV 386
N L+ Y K A+ VF M V R VS+ ++I G EE++++F E +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDV-RDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-F 303
Query: 387 RPDGITFISLLYACSHSGLVEQGCEIFSKM-KNLYGIEPTIEHYGCMVDLYGRAARLHKA 445
+PD +T S+L AC H + I++ M K + +E T+ + ++D+Y + + A
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITA 361
Query: 446 YEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVA 505
+ M + V W +++ G +L E +K M DH+ + +V+
Sbjct: 362 RDVFNSME-CKDTVSWNSIISGYIQSG--DLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 506 GKWKDV 511
+ D+
Sbjct: 419 TRLADL 424
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/649 (34%), Positives = 339/649 (52%), Gaps = 47/649 (7%)
Query: 23 LEPRWVSLLSKCS---SLKPTKQIHTHLYVTGL-HTHPLFFGKLLLHCAVTISDALHYAL 78
L P ++ L C+ +L K +H H+ G+ PL L++ A H AL
Sbjct: 2 LIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPL--ANTLVNVYGKCGAASH-AL 58
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
++F P+ D + +++ F + + PD F F+ +K AN
Sbjct: 59 QVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANL 118
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
GS+ G Q+HC + V ++L+ MY +CG SA+
Sbjct: 119 GSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK------------------ 160
Query: 199 TACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWST 258
VF + V+N SW M++GY K+G A +F +P+K+ SW+
Sbjct: 161 -------------AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTA 207
Query: 259 MIVGLAHNGSFDQAFGFFRELLREGIRP-NEVSLTGVLSACAQAGASEFGKILHGFMEKS 317
+I G +G +AF F E+ RE + + + L+ ++ ACA AS G+ +HG +
Sbjct: 208 LISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIAL 267
Query: 318 GFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQL 377
GF ++NALID Y+KC +V A+ +F M R +VSWTS+I G+A HG E+AL L
Sbjct: 268 GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR-HRDVVSWTSLIVGMAQHGQAEKALAL 326
Query: 378 FHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYG 437
+ +M GV+P+ +TF+ L+YACSH G VE+G E+F M YGI P+++HY C++DL G
Sbjct: 327 YDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLG 386
Query: 438 RAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGN----IELAELVKARLAEMDPNNSG 493
R+ L +A I MP P+ W LL AC G I +A+ + + DP+
Sbjct: 387 RSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPST-- 444
Query: 494 DHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEE 553
++LLSN+YA A W V RR + E + K PG S +E+ K F AGE + + E+
Sbjct: 445 -YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKED 503
Query: 554 AHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQL 613
L+++ +R GY P +LHD++E+EKE + HSE+ A A+G+ K G +
Sbjct: 504 IFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPI 563
Query: 614 RIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
RIVKNLRVCGDCH V+K IS+ + EIIVRD +R+H FK G CSC D+W
Sbjct: 564 RIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/439 (43%), Positives = 280/439 (63%), Gaps = 11/439 (2%)
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
+L Y+K G+L A ++F EMP++D SW+ +I GL +A ++ + EGIR +
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRS 209
Query: 288 EVSLTGVLSACAQAGASEFGK-ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
EV++ L AC+ G + G+ I HG+ + V+NA ID YSKCG V A VF
Sbjct: 210 EVTVVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQVF 264
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLV 406
+ +S+V+W ++I G A+HG AL++F ++E++G++PD +++++ L AC H+GLV
Sbjct: 265 EQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLV 324
Query: 407 EQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLG 466
E G +F+ M G+E ++HYGC+VDL RA RL +A++ IC M + P+ V+W++LLG
Sbjct: 325 EYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLG 383
Query: 467 ACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKT 526
A I+ ++E+AE+ + EM NN GD VLLSNVYA G+WKDV +R M + + K
Sbjct: 384 ASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKI 443
Query: 527 PGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEE 586
PG S IE ++ F +K +E E ++K+ EI ++R E GY Q VLHDI EEE
Sbjct: 444 PGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIR-EDGYVAQTGLVLHDIGEEE 502
Query: 587 KEDSVSKHSEKLAAAFGIAKLPKGKQ---LRIVKNLRVCGDCHTVMKLISKFYQVEIIVR 643
KE+++ HSEKLA A+G+ + + +R++ NLR+CGDCH V K ISK Y+ EIIVR
Sbjct: 503 KENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVR 562
Query: 644 DRSRFHLFKDGLCSCRDYW 662
DR RFH FKDG CSCRD+W
Sbjct: 563 DRVRFHRFKDGSCSCRDFW 581
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 176/419 (42%), Gaps = 54/419 (12%)
Query: 29 SLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPD 88
+++ KC S KQ+ +H G +LL CA++ L +A+++F++ P P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 89 TFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFP-----------DSFSFAFALKGVAN 137
T +N +IR HP + + ++ D+ + +F LK A
Sbjct: 68 TNDWNAIIRGFAGSS------HPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACAR 121
Query: 138 GGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN-- 195
QLHCQ R G + TTL+ Y + GD SA ++FDEMP +V +WN
Sbjct: 122 ALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNAL 181
Query: 196 ---------------------------------AAVTACFRCGDVAGARGVFGRMPVRNL 222
AA+ AC GDV +F N+
Sbjct: 182 IAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNV 241
Query: 223 TSWNVMLAGYTKAGELGLARRVFSEMPLKDD-VSWSTMIVGLAHNGSFDQAFGFFRELLR 281
N + Y+K G + A +VF + K V+W+TMI G A +G +A F +L
Sbjct: 242 IVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLED 301
Query: 282 EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
GI+P++VS L+AC AG E+G + M G ++D S+ G +
Sbjct: 302 NGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLRE 361
Query: 342 AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDG-ITFISLLYA 399
A + +MS+ V W S++ ++ E A E++E GV DG +S +YA
Sbjct: 362 AHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYA 420
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/639 (33%), Positives = 339/639 (53%), Gaps = 43/639 (6%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLL---LHCAVTISDALHYALRLFQHF 84
+S +K L+ ++++ + +G+ + L L+ + C +A+ A RLF +
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC-----NAIDVAKRLFDEY 297
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
+ + N + F + V PD S A+ + ++ G
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRC 204
H R+GF++ + LI MY +C ++A R+FD
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD-------------------- 396
Query: 205 GDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
RM + + +WN ++AGY + GE+ A F MP K+ VSW+T+I GL
Sbjct: 397 -----------RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 265 HNGSFDQAFGFFRELL-REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS 323
F++A F + +EG+ + V++ + SAC GA + K ++ ++EK+G
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 324 SVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE 383
+ L+D +S+CG+ A +F +++ R + +WT+ I +AM G+ E A++LF +M E
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 384 SGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLH 443
G++PDG+ F+ L ACSH GLV+QG EIF M L+G+ P HYGCMVDL GRA L
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 444 KAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYA 503
+A + I MP+ PN VIW +LL AC + GN+E+A ++ + P +G +VLLSNVYA
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYA 684
Query: 504 VAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIML 563
AG+W D+ +R +M E+ + K PG S I+I + F +G++ + L E+
Sbjct: 685 SAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQ 744
Query: 564 RLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCG 623
R + G+ P + VL D++E+EK +S+HSEKLA A+G+ KG +RIVKNLRVC
Sbjct: 745 R-ASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCS 803
Query: 624 DCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
DCH+ K SK Y EII+RD +RFH + G CSC D+W
Sbjct: 804 DCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 211/483 (43%), Gaps = 75/483 (15%)
Query: 29 SLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLH-CAVTISDALHYALRLFQHFPNP 87
S L C ++ K H L GL KL+ C + ++L +A +F++ +
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 88 DT-FMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
T FMYN+LIR F++M + + PD ++F F L A + G Q
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA---------- 196
+H + G+ +FV +L+ Y ECG+ +SAR+VFDEM E NVV+W +
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 197 --------------------------AVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLA 230
++AC + D+ V+ + + ++M++
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 231 G----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
Y K + +A+R+F E + + M G +A G F ++ G+RP
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
+ +S+ +S+C+Q +GK HG++ ++GF ++ NALID Y KC A +F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 347 RNMSVG------------------------------RSIVSWTSIIAGLAMHGHGEEALQ 376
MS ++IVSW +II+GL EEA++
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 377 LFHEME-ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDL 435
+F M+ + GV DG+T +S+ AC H G ++ I+ ++ GI+ + +VD+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLVDM 514
Query: 436 YGR 438
+ R
Sbjct: 515 FSR 517
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 159/329 (48%), Gaps = 18/329 (5%)
Query: 161 FVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACFRC---GDVAGARGV 213
F+ +LI Y G A +F M P+ T+ ++AC + G+ G+
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 214 FGRMP-VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQA 272
+M ++L N ++ Y + GEL AR+VF EM ++ VSW++MI G A A
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 273 FG-FFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALID 331
FFR + E + PN V++ V+SACA+ E G+ ++ F+ SG + +AL+D
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 332 TYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIA-GLAMHGHGEEALQLFHEMEESGVRPDG 390
Y KC + +A+ +F G S + + +A G EAL +F+ M +SGVRPD
Sbjct: 280 MYMKCNAIDVAKRLFD--EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 391 ITFISLLYACSH--SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEF 448
I+ +S + +CS + L + C + ++N G E ++D+Y + R A+
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYV-LRN--GFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 449 ICQMPISPNAVIWRTLLGACSIHGNIELA 477
+M + V W +++ +G ++ A
Sbjct: 395 FDRMS-NKTVVTWNSIVAGYVENGEVDAA 422
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/578 (37%), Positives = 316/578 (54%), Gaps = 40/578 (6%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
++ DS +++ +K + ++ G + + +G +F+ LI+MY + A
Sbjct: 57 LWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAH 116
Query: 181 RVFDEMPEPNVVTWNAAVTACFRCGDVAGA-----------------------RGVFGRM 217
++FD+MP+ NV++W ++A +C A R G
Sbjct: 117 QLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS 176
Query: 218 PVRNLTS-------------WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
VR L + ++ + K GE A VF EM D + W+++I G A
Sbjct: 177 DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
N D A F+ + R G + +LT VL AC E G H + K I
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI-- 294
Query: 325 VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES 384
+NNAL+D Y KCG++ A VF M R +++W+++I+GLA +G+ +EAL+LF M+ S
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 385 GVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHK 444
G +P+ IT + +L+ACSH+GL+E G F MK LYGI+P EHYGCM+DL G+A +L
Sbjct: 354 GTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDD 413
Query: 445 AYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAV 504
A + + +M P+AV WRTLLGAC + N+ LAE ++ +DP ++G + LLSN+YA
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYAN 473
Query: 505 AGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLR 564
+ KW V IR M ++ + K PG S IE+NK ++ F+ G+ + E KL +++ R
Sbjct: 474 SQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHR 533
Query: 565 LRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGD 624
L GY P+ VL D+E E+ EDS+ HSEKLA AFG+ LP K +RI KNLR+CGD
Sbjct: 534 LTG-IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGD 592
Query: 625 CHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
CH KL SK I++RD R+H F+DG CSC DYW
Sbjct: 593 CHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 150/360 (41%), Gaps = 44/360 (12%)
Query: 43 IHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXX 102
I HLY G H +F +L++ V + L+ A +LF P + + T+I
Sbjct: 83 ICRHLYFNG-HRPMMFLVNVLINMYVKF-NLLNDAHQLFDQMPQRNVISWTTMISAYSKC 140
Query: 103 XXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFV 162
+ M R V P+ ++++ L+ NG S LHC + G ++ VFV
Sbjct: 141 KIHQKALELLVLMLR-DNVRPNVYTYSSVLRS-CNGMS--DVRMLHCGIIKEGLESDVFV 196
Query: 163 GTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV--- 219
+ LI ++ + G+ E A VFDEM + + WN+ + + A +F RM
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 220 ----------------------------------RNLTSWNVMLAGYTKAGELGLARRVF 245
++L N ++ Y K G L A RVF
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 246 SEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASE 305
++M +D ++WSTMI GLA NG +A F + G +PN +++ GVL AC+ AG E
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 306 FGKILHGFMEK-SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAG 364
G M+K G + +ID K G + A + M V+W +++
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 102/228 (44%), Gaps = 23/228 (10%)
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
L + +A L G+ + + + ++ C A G ++ + +G +
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
+ N LI+ Y K + A +F M R+++SWT++I+ + ++AL+L M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALELLVLML 154
Query: 383 ESGVRPDGITFISLLYACS--------HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVD 434
VRP+ T+ S+L +C+ H G++++ G+E + ++D
Sbjct: 155 RDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKE------------GLESDVFVRSALID 202
Query: 435 LYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA-ELVK 481
++ + A +M ++ +A++W +++G + + ++A EL K
Sbjct: 203 VFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFK 249
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 328/572 (57%), Gaps = 43/572 (7%)
Query: 132 LKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNV 191
L + +L+ G ++H + + ++ T L+ YG+C E AR+V DEMPE NV
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 192 VTWNAAVTACFRCGDVAGARGVFGRMPVRN-----------LTS---------------- 224
V+W A ++ + G + A VF M + LTS
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 225 ---WNV---------MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQA 272
WN +L Y KAG++ AR +F +P +D VS + +I G A G ++A
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 273 FGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDT 332
F L EG+ PN V+ +L+A + + GK H + + + + + N+LID
Sbjct: 239 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 298
Query: 333 YSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM-EESGVRPDGI 391
YSKCGN++ A+ +F NM R+ +SW +++ G + HG G E L+LF M +E V+PD +
Sbjct: 299 YSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 392 TFISLLYACSHSGLVEQGCEIFSKM-KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFIC 450
T +++L CSH + + G IF M YG +P EHYGC+VD+ GRA R+ +A+EFI
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Query: 451 QMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKD 510
+MP P A + +LLGAC +H ++++ E V RL E++P N+G++V+LSN+YA AG+W D
Sbjct: 418 RMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWAD 477
Query: 511 VVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAG 570
V ++R M ++++ K PG S I+ + ++ F A ++ + EE K++EI ++++ +AG
Sbjct: 478 VNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMK-QAG 536
Query: 571 YAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMK 630
Y P + VL+D++EE+KE + HSEKLA FG+ +G +R+ KNLR+C DCH K
Sbjct: 537 YVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAK 596
Query: 631 LISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+ SK ++ E+ +RD++RFH DG+CSC DYW
Sbjct: 597 IFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 140/343 (40%), Gaps = 71/343 (20%)
Query: 27 WVSLLSKC---SSLKPTKQIHTH------LYVTGLHTHPL-FFGKLLLHCAVTISDALHY 76
+ +LL+ C +L+ +++H H L T L T L F+GK D L
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK---------CDCLED 105
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A ++ P + + +I F +M R P+ F+FA L
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK-PNEFTFATVLTSCI 164
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
L G Q+H + +D+H+FVG++L+ MY + G + AR +F+ +PE +VV+ A
Sbjct: 165 RASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTA 224
Query: 197 AVTACFRCGDVAGARGVFGRMPVRNLTS-------------------------------- 224
+ + G A +F R+ ++
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 225 -------WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFR 277
N ++ Y+K G L ARR+F MP + +SW+ M+VG + +G + FR
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 278 ELLREG-IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGF 319
+ E ++P+ V+L VLS C+ HG ME +G
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCS-----------HGRMEDTGL 376
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 240 LARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTG---VLS 296
L R FS P + I L NG +A LL + E+ G +L+
Sbjct: 7 LIHRSFSSSPTNYVLQTILPISQLCSNGRLQEA------LLEMAMLGPEMGFHGYDALLN 60
Query: 297 ACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIV 356
AC A G+ +H M K+ +L + + L+ Y KC + A+ V M +++V
Sbjct: 61 ACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP-EKNVV 119
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM 416
SWT++I+ + GH EAL +F EM S +P+ TF ++L +C + + G +I +
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 417 KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP----ISPNAVI 460
+ + I ++D+Y +A ++ +A E +P +S A+I
Sbjct: 180 VK-WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/540 (37%), Positives = 302/540 (55%), Gaps = 35/540 (6%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D F++ ++ A G L+ G Q+H R D +L+S+Y +CG F
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGK-------F 336
Query: 184 DEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARR 243
DE AR +F +MP ++L SWN +L+GY +G +G A+
Sbjct: 337 DE------------------------ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 244 VFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGA 303
+F EM K+ +SW MI GLA NG ++ F + REG P + + +G + +CA GA
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 304 SEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIA 363
G+ H + K GF S NALI Y+KCG V A+ VFR M S VSW ++IA
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS-VSWNALIA 491
Query: 364 GLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIE 423
L HGHG EA+ ++ EM + G+RPD IT +++L ACSH+GLV+QG + F M+ +Y I
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 424 PTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKAR 483
P +HY ++DL R+ + A I +P P A IW LL C +HGN+EL + +
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 484 LAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVA 543
L + P + G ++LLSN++A G+W++V +R+ M ++ + K S IE+ ++ F+
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671
Query: 544 GEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEE-EKEDSVSKHSEKLAAAF 602
+ + E + L+++ +R GY P VLHD+E + KED ++ HSEK+A AF
Sbjct: 672 DDTSHPEAEAVYIYLQDLGKEMR-RLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAF 730
Query: 603 GIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
G+ KLP G +RI KNLR CGDCH + +S Q +II+RDR RFH F++G CSC ++W
Sbjct: 731 GLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 129/541 (23%), Positives = 217/541 (40%), Gaps = 123/541 (22%)
Query: 11 PSSGTEEAMSNTLEPRWVSLLSKC-----SSLKPTKQIHTHLYVTGLHTHPLFFGKLL-L 64
P+ A++N R+ + L C +SL+ + +H ++ G +L+ +
Sbjct: 3 PNPDLVRAIAN----RYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDV 58
Query: 65 HCAVTISDALHYALRLFQHFPNP---------------------------------DTFM 91
+C S L+YA +LF P DT M
Sbjct: 59 YCK---SSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVM 115
Query: 92 YNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA-NGGSLKPGTQLHCQ 150
YN +I + F +M +H PD+F+FA L G+A K Q H
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKM-KHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAA 174
Query: 151 AFRHGFDTHVFVGTTLISMYGECGDS----ESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
A + G V L+S+Y +C S SAR+VFDE+ E
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILE------------------ 216
Query: 207 VAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDD----VSWSTMIVG 262
++ SW M+ GY K G L + M DD V+++ MI G
Sbjct: 217 -------------KDERSWTTMMTGYVKNGYFDLGEELLEGM---DDNMKLVAYNAMISG 260
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM---EKSGF 319
+ G + +A R ++ GI +E + V+ ACA AG + GK +H ++ E F
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF 320
Query: 320 LYISSVN---------------------------NALIDTYSKCGNVAMAQLVFRNMSVG 352
+ +S+ NAL+ Y G++ A+L+F+ M
Sbjct: 321 HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK-E 379
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEI 412
++I+SW +I+GLA +G GEE L+LF M+ G P F + +C+ G G +
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 413 FSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
+++ + G + ++ ++ +Y + + +A + MP ++V W L+ A HG
Sbjct: 440 HAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMP-CLDSVSWNALIAALGQHG 497
Query: 473 N 473
+
Sbjct: 498 H 498
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 158/383 (41%), Gaps = 68/383 (17%)
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT 199
SL+ +H GF + LI +Y + + AR++FDE+ EP+ + V+
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 200 ACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTM 259
GD+ ARGVF + PV ++D V ++ M
Sbjct: 89 GYCASGDITLARGVFEKAPV-----------------------------CMRDTVMYNAM 119
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKI-LHGFMEKSG 318
I G +HN A F ++ EG +P+ + VL+ A E + H KSG
Sbjct: 120 ITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSG 179
Query: 319 FLYISSVNNALIDTYSKC-----------------------------------GNVAMAQ 343
YI+SV+NAL+ YSKC G + +
Sbjct: 180 AGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGE 239
Query: 344 LVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHS 403
+ M +V++ ++I+G G +EAL++ M SG+ D T+ S++ AC+ +
Sbjct: 240 ELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATA 299
Query: 404 GLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRT 463
GL++ G ++ + + L + + +V LY + + +A +MP + + V W
Sbjct: 300 GLLQLGKQVHAYV--LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP-AKDLVSWNA 356
Query: 464 LLGACSIHGNIELAELVKARLAE 486
LL G+I A+L+ + E
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKE 379
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P ++F+ A+K A G+ G Q H Q + GFD+ + G LI+MY +CG E AR+V
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNV----MLAGYTKAGEL 238
F MP + V+WNA + A + G A A V+ M + + + +L + AG +
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534
Query: 239 GLARRVFSEM-------PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
R+ F M P D ++ +I L +G F A L +P
Sbjct: 535 DQGRKYFDSMETVYRIPPGAD--HYARLIDLLCRSGKFSDAESVIESL---PFKPTAEIW 589
Query: 292 TGVLSACAQAGASEFGKI 309
+LS C G E G I
Sbjct: 590 EALLSGCRVHGNMELGII 607
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/638 (33%), Positives = 338/638 (52%), Gaps = 43/638 (6%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLL---LHCAVTISDALHYALRLFQHF 84
+S +K L+ ++++ + +G+ + L L+ + C +A+ A RLF +
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC-----NAIDVAKRLFDEY 297
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
+ + N + F + V PD S A+ + ++ G
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRC 204
H R+GF++ + LI MY +C ++A R+FD
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD-------------------- 396
Query: 205 GDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
RM + + +WN ++AGY + GE+ A F MP K+ VSW+T+I GL
Sbjct: 397 -----------RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 265 HNGSFDQAFGFFRELL-REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS 323
F++A F + +EG+ + V++ + SAC GA + K ++ ++EK+G
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 324 SVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE 383
+ L+D +S+CG+ A +F +++ R + +WT+ I +AM G+ E A++LF +M E
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 384 SGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLH 443
G++PDG+ F+ L ACSH GLV+QG EIF M L+G+ P HYGCMVDL GRA L
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 444 KAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYA 503
+A + I MP+ PN VIW +LL AC + GN+E+A ++ + P +G +VLLSNVYA
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYA 684
Query: 504 VAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIML 563
AG+W D+ +R +M E+ + K PG S I+I + F +G++ + L E+
Sbjct: 685 SAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQ 744
Query: 564 RLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCG 623
R + G+ P + VL D++E+EK +S+HSEKLA A+G+ KG +RIVKNLRVC
Sbjct: 745 RA-SHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCS 803
Query: 624 DCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDY 661
DCH+ K SK Y EII+RD +RFH + G CSC D+
Sbjct: 804 DCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 211/483 (43%), Gaps = 75/483 (15%)
Query: 29 SLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLH-CAVTISDALHYALRLFQHFPNP 87
S L C ++ K H L GL KL+ C + ++L +A +F++ +
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 88 DT-FMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
T FMYN+LIR F++M + + PD ++F F L A + G Q
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA---------- 196
+H + G+ +FV +L+ Y ECG+ +SAR+VFDEM E NVV+W +
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 197 --------------------------AVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLA 230
++AC + D+ V+ + + ++M++
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 231 G----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
Y K + +A+R+F E + + M G +A G F ++ G+RP
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
+ +S+ +S+C+Q +GK HG++ ++GF ++ NALID Y KC A +F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 347 RNMSVG------------------------------RSIVSWTSIIAGLAMHGHGEEALQ 376
MS ++IVSW +II+GL EEA++
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 377 LFHEME-ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDL 435
+F M+ + GV DG+T +S+ AC H G ++ I+ ++ GI+ + +VD+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLVDM 514
Query: 436 YGR 438
+ R
Sbjct: 515 FSR 517
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 158/328 (48%), Gaps = 16/328 (4%)
Query: 161 FVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACFRC---GDVAGARGV 213
F+ +LI Y G A +F M P+ T+ ++AC + G+ G+
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 214 FGRMP-VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQA 272
+M ++L N ++ Y + GEL AR+VF EM ++ VSW++MI G A A
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 273 FG-FFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALID 331
FFR + E + PN V++ V+SACA+ E G+ ++ F+ SG + +AL+D
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 332 TYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGI 391
Y KC + +A+ +F ++ ++ + G EAL +F+ M +SGVRPD I
Sbjct: 280 MYMKCNAIDVAKRLFDEYGAS-NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 392 TFISLLYACSH--SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFI 449
+ +S + +CS + L + C + ++N G E ++D+Y + R A+
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYV-LRN--GFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 450 CQMPISPNAVIWRTLLGACSIHGNIELA 477
+M + V W +++ +G ++ A
Sbjct: 396 DRMS-NKTVVTWNSIVAGYVENGEVDAA 422
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 302/550 (54%), Gaps = 31/550 (5%)
Query: 114 QMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGEC 173
Q H PD + + L V + L G +H + G V + +I MYG+
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 174 GDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYT 233
G +F++ NA +T R G V A +F
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMF------------------- 341
Query: 234 KAGELGLARRVFSEMPLK-DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLT 292
+F E ++ + VSW+++I G A NG +A FRE+ G++PN V++
Sbjct: 342 ---------ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 293 GVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVG 352
+L AC A G+ HGF + L V +ALID Y+KCG + ++Q+VF NM
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF-NMMPT 451
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEI 412
+++V W S++ G +MHG +E + +F + + ++PD I+F SLL AC GL ++G +
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 413 FSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
F M YGI+P +EHY CMV+L GRA +L +AY+ I +MP P++ +W LL +C +
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 473 NIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMI 532
N++LAE+ +L ++P N G +VLLSN+YA G W +V SIR M + K PG S I
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 533 EINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVS 592
++ +Y +AG+K + ++ +K+ EI +R ++G+ P + LHD+EE+E+E +
Sbjct: 632 QVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMR-KSGHRPNLDFALHDVEEQEQEQMLW 690
Query: 593 KHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFK 652
HSEKLA FG+ P G L+++KNLR+CGDCH V+K IS + EI +RD +RFH FK
Sbjct: 691 GHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFK 750
Query: 653 DGLCSCRDYW 662
DG+CSC D+W
Sbjct: 751 DGICSCGDFW 760
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 202/473 (42%), Gaps = 78/473 (16%)
Query: 40 TKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXX 99
T Q H + +G KL+ + + + + A + Q P+P + +++LI
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLI--ASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYAL 91
Query: 100 XXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTH 159
F +M H + PDS K A + K G Q+HC + G D
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 160 VFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV 219
FV ++ MY CG AR+VFD M + +VVT +A + A R G + + M
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 220 R----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGF 275
N+ SWN +L+G+ ++ G +A
Sbjct: 211 SGIEANIVSWNGILSGFNRS-------------------------------GYHKEAVVM 239
Query: 276 FRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSK 335
F+++ G P++V+++ VL + + G+++HG++ K G L V +A+ID Y K
Sbjct: 240 FQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK 299
Query: 336 CGNV-----------------------------------AMAQLVFRNMSVGRSIVSWTS 360
G+V M +L F+ ++ ++VSWTS
Sbjct: 300 SGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFEL-FKEQTMELNVVSWTS 358
Query: 361 IIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLY 420
IIAG A +G EAL+LF EM+ +GV+P+ +T S+L AC + + G ++
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 421 GIEPTIEHYG-CMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
++ H G ++D+Y + R++ + MP + N V W +L+ S+HG
Sbjct: 419 LLDNV--HVGSALIDMYAKCGRINLSQIVFNMMP-TKNLVCWNSLMNGFSMHG 468
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/669 (33%), Positives = 343/669 (51%), Gaps = 45/669 (6%)
Query: 35 SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNT 94
SS++ + +H + T P F L++ + D A + + P + + +
Sbjct: 20 SSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKL-DHPESARLVLRLTPARNVVSWTS 78
Query: 95 LIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRH 154
LI F +MRR V P+ F+F A K VA+ G Q+H A +
Sbjct: 79 LISGLAQNGHFSTALVEFFEMRREGVV-PNDFTFPCAFKAVASLRLPVTGKQIHALAVKC 137
Query: 155 GFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCG---DVAGAR 211
G VFVG + MY + + AR++FDE+PE N+ TWNA ++ G + A
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Query: 212 GVFGRMP-----------VRNLTSW-------------------------NVMLAGYTKA 235
F R+ + + W N ++ Y K
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC 257
Query: 236 GELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
++ + +F+EM K+ VSW +++ N ++A + ++ + ++ ++ VL
Sbjct: 258 KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI 355
SACA E G+ +H K+ V +AL+D Y KCG + ++ F M +++
Sbjct: 318 SACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNL 376
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGV--RPDGITFISLLYACSHSGLVEQGCEIF 413
V+ S+I G A G + AL LF EM G P+ +TF+SLL ACS +G VE G +IF
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIF 436
Query: 414 SKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGN 473
M++ YGIEP EHY C+VD+ GRA + +AYEFI +MPI P +W L AC +HG
Sbjct: 437 DSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGK 496
Query: 474 IELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIE 533
+L L L ++DP +SG+HVLLSN +A AG+W + ++R + + K G+S I
Sbjct: 497 PQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWIT 556
Query: 534 INKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSK 593
+ ++ F A ++ + + +E L ++ + A AGY P ++ L+D+EEEEK VS
Sbjct: 557 VKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEA-AGYKPDLKLSLYDLEEEEKAAEVSH 615
Query: 594 HSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKD 653
HSEKLA AFG+ LP +RI KNLR+CGDCH+ K +S + EIIVRD +RFH FKD
Sbjct: 616 HSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKD 675
Query: 654 GLCSCRDYW 662
G+CSC+DYW
Sbjct: 676 GICSCKDYW 684
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/632 (33%), Positives = 332/632 (52%), Gaps = 48/632 (7%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A ++F P + ++ L+ F +M R ++P+ F+F+ LK
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACG 118
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
+L+ G Q+H + GF+ V VG +L+ MY +CG A +VF + + ++++WNA
Sbjct: 119 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 197 AVTACFRCGDVAGARGVFGRMPVRNL----------------TSWNVMLAG--------- 231
+ G + A FG M N+ +S ++ AG
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 232 ------------------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAF 273
Y K G L AR+ F ++ K +SWS++I+G A G F +A
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
G F+ L + + +L+ ++ A GK + K +SV N+++D Y
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
KCG V A+ F M + + ++SWT +I G HG G++++++F+EM + PD + +
Sbjct: 359 LKCGLVDEAEKCFAEMQL-KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 394 ISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP 453
+++L ACSHSG++++G E+FSK+ +GI+P +EHY C+VDL GRA RL +A I MP
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP 477
Query: 454 ISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVS 513
I PN IW+TLL C +HG+IEL + V L +D N ++V++SN+Y AG W + +
Sbjct: 478 IKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGN 537
Query: 514 IRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAP 573
R + + K G S +EI + ++ F +GE + +T + L+E RLR E GY
Sbjct: 538 ARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVY 597
Query: 574 QVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAK---LPKGKQLRIVKNLRVCGDCHTVMK 630
++ LHDI++E KE+++ HSEKLA +A KGK +R+ KNLRVC DCH +K
Sbjct: 598 GLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIK 657
Query: 631 LISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+SK ++ +VRD RFH F+DG CSC DYW
Sbjct: 658 GLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 162/311 (52%), Gaps = 11/311 (3%)
Query: 221 NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELL 280
NL + N ++ Y K E +A +VF MP ++ VSWS ++ G NG + F E+
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
R+GI PNE + + L AC A E G +HGF K GF + V N+L+D YSKCG +
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 341 MAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGV--RPDGITFISLLY 398
A+ VFR + V RS++SW ++IAG G+G +AL F M+E+ + RPD T SLL
Sbjct: 160 EAEKVFRRI-VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 399 ACSHSGLVEQGCEIFSKM-KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPN 457
ACS +G++ G +I + ++ + + G +VDLY + L A + Q+
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKT 277
Query: 458 AVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRT 517
+ W +L+ + G A + RL E+ N+ D LS++ V + D +R+
Sbjct: 278 MISWSSLILGYAQEGEFVEAMGLFKRLQEL--NSQIDSFALSSIIGV---FADFALLRQG 332
Query: 518 MTEQSM-VKTP 527
Q++ VK P
Sbjct: 333 KQMQALAVKLP 343
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 171/373 (45%), Gaps = 48/373 (12%)
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
G Q+HC + G ++ LI MY +C + A +VFD MPE NVV+W+A ++
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 204 CGDVAGARGVFGRM------PVRNLTSWNVMLAG-------------------------- 231
GD+ G+ +F M P S N+ G
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 232 -------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
Y+K G + A +VF + + +SW+ MI G H G +A F + I
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 285 --RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS--VNNALIDTYSKCGNVA 340
RP+E +LT +L AC+ G GK +HGF+ +SGF SS + +L+D Y KCG +
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 341 MAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
A+ F + ++++SW+S+I G A G EA+ LF ++E + D S++
Sbjct: 265 SARKAFDQIK-EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 323
Query: 401 SHSGLVEQGCEIFSKMKNL-YGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAV 459
+ L+ QG ++ + L G+E ++ +VD+Y + + +A + +M + + +
Sbjct: 324 ADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQL-KDVI 380
Query: 460 IWRTLLGACSIHG 472
W ++ HG
Sbjct: 381 SWTVVITGYGKHG 393
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 97/183 (53%), Gaps = 4/183 (2%)
Query: 286 PNE-VSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
PN+ +L +L C + G S+ G +H ++ KSG +N LID Y KC MA
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
VF +M R++VSW+++++G ++G + +L LF EM G+ P+ TF + L AC
Sbjct: 63 VFDSMP-ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
+E+G +I + G E +E +VD+Y + R+++A E + + + + + W +
Sbjct: 122 ALEKGLQIHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEA-EKVFRRIVDRSLISWNAM 179
Query: 465 LGA 467
+
Sbjct: 180 IAG 182
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/682 (32%), Positives = 338/682 (49%), Gaps = 52/682 (7%)
Query: 27 WVSLLSKCSSLKPTK---QIHTHLYVTGLHTHP-LFFGKLLL--HCAVTISDALHYALRL 80
+ +LL C+ P Q+H G T+P L +LL +C V L A L
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR---RLDLACVL 206
Query: 81 FQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGS 140
F+ P D+ +NTLI H F++MR+ P F+F+ LK V
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ-PSDFTFSGVLKAVVGLHD 265
Query: 141 LKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA 200
G QLH + GF VG ++ Y + R +FDEMPE + V++N +++
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 201 CFRCGDVAGARGVFGRMP-----------------VRNLTSW------------------ 225
+ + F M NL+S
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 226 ----NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR 281
N ++ Y K A +F +P + VSW+ +I G G F ++
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 282 EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
+R ++ + VL A A + GK LH F+ +SG L + L+D Y+KCG++
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 342 AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
A VF M R+ VSW ++I+ A +G GE A+ F +M ESG++PD ++ + +L ACS
Sbjct: 506 AVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIW 461
H G VEQG E F M +YGI P +HY CM+DL GR R +A + + +MP P+ ++W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 462 RTLLGACSIHGNIELAELVKARLAEMDP-NNSGDHVLLSNVYAVAGKWKDVVSIRRTMTE 520
++L AC IH N LAE +L M+ ++ +V +SN+YA AG+W+ V +++ M E
Sbjct: 625 SSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Query: 521 QSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLH 580
+ + K P +S +E+N ++ F + ++ + +E K+ E+ + E GY P V+
Sbjct: 685 RGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE-GYKPDTSSVVQ 743
Query: 581 DIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEI 640
D++E+ K +S+ HSE+LA AF + P+G + ++KNLR C DCH +KLISK + EI
Sbjct: 744 DVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREI 803
Query: 641 IVRDRSRFHLFKDGLCSCRDYW 662
VRD SRFH F +G+CSC DYW
Sbjct: 804 TVRDTSRFHHFSEGVCSCGDYW 825
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 22/280 (7%)
Query: 195 NAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV 254
N V R G V+ AR V+ MP +N S N M++G+ K G++ AR +F MP + V
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVV 111
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREG--IRPNEVSLTGVLSACAQAGASEFGKILHG 312
+W+ ++ A N FD+AF FR++ R P+ V+ T +L C A +H
Sbjct: 112 TWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHA 171
Query: 313 FMEKSGFLY--ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH 370
F K GF +V+N L+ +Y + + +A ++F + S V++ ++I G G
Sbjct: 172 FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDS-VTFNTLITGYEKDGL 230
Query: 371 GEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHY- 429
E++ LF +M +SG +P TF +L A G F+ + L+ + T
Sbjct: 231 YTESIHLFLKMRQSGHQPSDFTFSGVLKAVV-------GLHDFALGQQLHALSVTTGFSR 283
Query: 430 -----GCMVDLYGRAARLHKAYEFICQMP----ISPNAVI 460
++D Y + R+ + +MP +S N VI
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 146/349 (41%), Gaps = 52/349 (14%)
Query: 164 TTLISMYGECGDSESARRVFDEMPEPNVVTW---------NAAVTACFR----------- 203
T+IS + + GD SAR +FD MP+ VVTW N+ F+
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 204 --------------CGDVAGARGV-----------FGRMPVRNLTSWNVMLAGYTKAGEL 238
C D V F P LT NV+L Y + L
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPF--LTVSNVLLKSYCEVRRL 200
Query: 239 GLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC 298
LA +F E+P KD V+++T+I G +G + ++ F ++ + G +P++ + +GVL A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 299 AQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSW 358
G+ LH +GF +SV N ++D YSK V +++F M VS+
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSY 319
Query: 359 TSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
+I+ + E +L F EM+ G F ++L ++ ++ G ++ +
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA-- 377
Query: 419 LYGIEPTIEHYG-CMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLG 466
L +I H G +VD+Y + +A E I + V W L+
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEA-ELIFKSLPQRTTVSWTALIS 425
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/691 (31%), Positives = 353/691 (51%), Gaps = 57/691 (8%)
Query: 17 EAMSNTLEPRWVSLLSKCS---SLKPTKQIHTHLYVTGLHTHPLFFGKLL---LHCAVTI 70
E SNTL SL+ CS +L +Q+H + G ++ G LL CA I
Sbjct: 386 EPDSNTL----ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA-DI 440
Query: 71 SDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAF 130
AL Y F + ++N ++ F QM+ V P+ +++
Sbjct: 441 ETALDY----FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPS 495
Query: 131 ALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPN 190
LK G L+ G Q+H Q + F + +V + LI MY + G ++A + +
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 191 VVTWNA-----------------------------------AVTACFRCGDVAGARGVFG 215
VV+W AV+AC + + +
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 216 RMPVRNLTS----WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQ 271
+ V +S N ++ Y++ G++ + F + D+++W+ ++ G +G+ ++
Sbjct: 616 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 675
Query: 272 AFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALID 331
A F + REGI N + + A ++ + GK +H + K+G+ + V NALI
Sbjct: 676 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALIS 735
Query: 332 TYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGI 391
Y+KCG+++ A+ F +S ++ VSW +II + HG G EAL F +M S VRP+ +
Sbjct: 736 MYAKCGSISDAEKQFLEVST-KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV 794
Query: 392 TFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQ 451
T + +L ACSH GLV++G F M + YG+ P EHY C+VD+ RA L +A EFI +
Sbjct: 795 TLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQE 854
Query: 452 MPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDV 511
MPI P+A++WRTLL AC +H N+E+ E L E++P +S +VLLSN+YAV+ KW
Sbjct: 855 MPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDAR 914
Query: 512 VSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGY 571
R+ M E+ + K PG S IE+ ++ F G++ + + +E H+ +++ R +E GY
Sbjct: 915 DLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR-ASEIGY 973
Query: 572 APQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKL 631
+L++++ E+K+ + HSEKLA +FG+ LP + ++KNLRVC DCH +K
Sbjct: 974 VQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKF 1033
Query: 632 ISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+SK EIIVRD RFH F+ G CSC+DYW
Sbjct: 1034 VSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 182/386 (47%), Gaps = 44/386 (11%)
Query: 123 PDSFSFAFALKG-VANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARR 181
P+ + + L+G + GSL G +LH Q + G D++ + L Y GD A +
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFK 141
Query: 182 VFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS----------------- 224
VFDEMPE + TWN + + G+F RM N+T
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 225 -----------------------WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIV 261
N ++ Y++ G + LARRVF + LKD SW MI
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLY 321
GL+ N +A F ++ GI P + + VLSAC + + E G+ LHG + K GF
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
+ V NAL+ Y GN+ A+ +F NMS R V++ ++I GL+ G+GE+A++LF M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR 441
G+ PD T SL+ ACS G + +G ++ + L G + G +++LY + A
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALLNLYAKCAD 439
Query: 442 LHKAYEFICQMPISPNAVIWRTLLGA 467
+ A ++ + + N V+W +L A
Sbjct: 440 IETALDYFLETEVE-NVVLWNVMLVA 464
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 177/412 (42%), Gaps = 44/412 (10%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
+ P ++F+ L SL+ G QLH + GF + +V L+S+Y G+ SA
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 181 RVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG--------- 231
+F M + + VT+N + +CG A +F RM + L + LA
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 232 ------------------------------YTKAGELGLARRVFSEMPLKDDVSWSTMIV 261
Y K ++ A F E +++ V W+ M+V
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLY 321
+F FR++ E I PN+ + +L C + G E G+ +H + K+ F
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
+ V + LID Y+K G + A + + G+ +VSWT++IAG + ++AL F +M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR 441
+ G+R D + + + AC+ +++G +I ++ + G + +V LY R +
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ-ACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 442 LHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAE--MDPNN 491
+ ++Y Q N + W L+ GN E A V R+ +D NN
Sbjct: 642 IEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 692
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 8/265 (3%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y G+L A +VF EMP + +W+ MI LA + FG F ++ E + PNE +
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 292 TGVLSACAQAGASEFGKI--LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM 349
+GVL AC + G+ F + +H + G + V N LID YS+ G V +A+ VF +
Sbjct: 190 SGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 350 SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQG 409
+ + SW ++I+GL+ + EA++LF +M G+ P F S+L AC +E G
Sbjct: 249 RL-KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 410 CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACS 469
++ + L G +V LY L A M +AV + TL+ S
Sbjct: 308 EQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLS 365
Query: 470 IHGNIELA-ELVK-ARLAEMDPNNS 492
G E A EL K L ++P+++
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSN 390
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 4/198 (2%)
Query: 242 RRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQA 301
R VF + S++ + V ++ + SF + + GIRPN +L +L C +
Sbjct: 40 RTVFPTLCGTRRASFAAISVYISEDESFQEKR--IDSVENRGIRPNHQTLKWLLEGCLKT 97
Query: 302 -GASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTS 360
G+ + G+ LH + K G ++ L D Y G++ A VF M R+I +W
Sbjct: 98 NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP-ERTIFTWNK 156
Query: 361 IIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLY 420
+I LA E LF M V P+ TF +L AC + E
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 421 GIEPTIEHYGCMVDLYGR 438
G+ + ++DLY R
Sbjct: 217 GLRDSTVVCNPLIDLYSR 234
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/611 (33%), Positives = 318/611 (52%), Gaps = 73/611 (11%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P + ++ ++ + +L+ G ++H GF + + L+ MY +CG AR+V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGE----- 237
FDEMP ++ +WN V G + AR +F M ++ SW M+ GY K +
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 238 --LGLARRVFSEMP---------------------------------LKDDVSWSTMIVG 262
L +RV + P D+V WS+++
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 263 LAHNGSFDQA-------------------------------FGFFRELLREGIRPNEVSL 291
G D+A F F EL+ RPNE +
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
GVL+ACA E GK +HG+M + GF S +++L+D Y+KCGN+ A+ V +
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV-DGCP 381
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
+VSWTS+I G A +G +EAL+ F + +SG +PD +TF+++L AC+H+GLVE+G E
Sbjct: 382 KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE 441
Query: 412 IFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIH 471
F + + + T +HY C+VDL R+ R + I +MP+ P+ +W ++LG CS +
Sbjct: 442 FFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501
Query: 472 GNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSM 531
GNI+LAE L +++P N +V ++N+YA AGKW++ +R+ M E + K PG S
Sbjct: 502 GNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSW 561
Query: 532 IEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSV 591
EI + + F+A + + + + + LRE+ +++ E GY P VLHD+E+E+KE+++
Sbjct: 562 TEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK-EEGYVPATSLVLHDVEDEQKEENL 620
Query: 592 SKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLF 651
HSEKLA AF I +G +++ KNLR C DCH +K IS + +I VRD +RFH F
Sbjct: 621 VYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCF 680
Query: 652 KDGLCSCRDYW 662
++G CSC DYW
Sbjct: 681 ENGQCSCGDYW 691
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 194/464 (41%), Gaps = 76/464 (16%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAV--TISDA------------ 73
+ + S+ +L+ K++H H+ +G + + +LL A ++ DA
Sbjct: 92 IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151
Query: 74 ---------------LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRH 118
L A +LF D++ + ++ + M+R
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211
Query: 119 PTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSES 178
P P+ F+ + A+ A ++ G ++H R G D+ + ++L+ MYG+CG +
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271
Query: 179 ARRVFDEMPEPNVVTWNAAVTACFR--------------------------------CGD 206
AR +FD++ E +VV+W + + F+ C D
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACAD 331
Query: 207 VAG---ARGVFGRMPVRNLTSWNV----MLAGYTKAGELGLARRVFSEMPLKDDVSWSTM 259
+ + V G M ++ ++ YTK G + A+ V P D VSW+++
Sbjct: 332 LTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSL 391
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFG-KILHGFMEKSG 318
I G A NG D+A +F LL+ G +P+ V+ VLSAC AG E G + + EK
Sbjct: 392 IGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHR 451
Query: 319 FLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH---GEEAL 375
+ S L+D ++ G + V M + S W S++ G + +G+ EEA
Sbjct: 452 LSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAA 511
Query: 376 QLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNL 419
Q ++E + +T++++ + +G E+ ++ +M+ +
Sbjct: 512 QELFKIEPE----NPVTYVTMANIYAAAGKWEEEGKMRKRMQEI 551
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Query: 277 RELLREGI-------RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNAL 329
++LLRE + +P + ++ C+Q A E GK +H + SGF+ + N L
Sbjct: 67 QKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRL 126
Query: 330 IDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPD 389
+ Y+KCG++ A+ VF M R + SW ++ G A G EEA +LF EM E D
Sbjct: 127 LRMYAKCGSLVDARKVFDEMP-NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----D 181
Query: 390 GITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEF- 448
++ +++ E+ ++S M+ + P I V + + E
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241
Query: 449 --ICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD 488
I + + + V+W +L+ G I+ A + ++ E D
Sbjct: 242 GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/587 (35%), Positives = 310/587 (52%), Gaps = 52/587 (8%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGEC---GDSESAR 180
D F+ + A +L G QLH A R G V +L+ MY +C G + R
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCR 325
Query: 181 RVFDEMPEPNVVTWNAAVTACFR----------------------------------CGD 206
+VFD M + +V++W A +T + CG+
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 207 VAGAR-------GVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTM 259
++ R F R N + N +++ + K+ + A+R F + K+ VS++T
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGF 319
+ G N +F+QAF E+ + + + +LS A G+ G+ +H + K G
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 320 LYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
V NALI YSKCG++ A VF N R+++SWTS+I G A HG L+ F+
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVF-NFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRA 439
+M E GV+P+ +T++++L ACSH GLV +G F+ M + I+P +EHY CMVDL RA
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 440 ARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLS 499
L A+EFI MP + ++WRT LGAC +H N EL +L ++ E+DPN ++ LS
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLS 684
Query: 500 NVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLR 559
N+YA AGKW++ +RR M E+++VK G S IE+ ++ F G+ + + +D+L
Sbjct: 685 NIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELD 744
Query: 560 EIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSK----HSEKLAAAFGIAKLPKGKQLRI 615
++ ++ GY P VLH +EEE E + HSEK+A AFG+ K + +R+
Sbjct: 745 RLITEIK-RCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRV 803
Query: 616 VKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
KNLRVCGDCH MK IS EI++RD +RFH FKDG CSC DYW
Sbjct: 804 FKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 148/349 (42%), Gaps = 47/349 (13%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYG 171
F +M V P+ F+F+ A K N + G Q+ QAF+ G ++ V ++ISM+
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFV 419
Query: 172 ECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----------- 220
+ E A+R F+ + E N+V++N + R + A + + R
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 221 ----------------------------NLTSWNVMLAGYTKAGELGLARRVFSEMPLKD 252
N N +++ Y+K G + A RVF+ M ++
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539
Query: 253 DVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG-ASEFGKILH 311
+SW++MI G A +G + F +++ EG++PNEV+ +LSAC+ G SE + +
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599
Query: 312 GFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH- 370
E ++D + G + A M ++ W + + +H +
Sbjct: 600 SMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNT 659
Query: 371 --GEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
G+ A + E++ + P +S +YAC +G E+ E+ KMK
Sbjct: 660 ELGKLAARKILELDPN--EPAAYIQLSNIYAC--AGKWEESTEMRRKMK 704
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/526 (22%), Positives = 207/526 (39%), Gaps = 107/526 (20%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
DS +F+ LK + G +H + + + +LIS+Y + GDS A VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 184 DEMP---EPNVVTWNAAVTACFRCGDVAGARGVF------GRMPVRNLTSWNVMLAGYTK 234
+ M + +VV+W+A + G A VF G +P N + ++ +
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP--NDYCYTAVIRACSN 178
Query: 235 AGELGLAR-------------------------------------RVFSEMPLKDDVSWS 257
+ +G+ R +VF +M + V+W+
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 258 TMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS 317
MI G +A FF +++ G ++ +L+ V SACA+ GK LH + +S
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 318 GFLYISSVNNALIDTYSKC---GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH-GEE 373
G + V +L+D Y+KC G+V + VF M S++SWT++I G + + E
Sbjct: 299 GL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITGYMKNCNLATE 355
Query: 374 ALQLFHEMEESG-VRPDGITFISLLYAC----------------------SHSGLVEQGC 410
A+ LF EM G V P+ TF S AC S+S +
Sbjct: 356 AINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVI 415
Query: 411 EIFSKMKNLYGIEPTIE--------HYGCMVDLYGRAARLHKAYEFICQMP---ISPNAV 459
+F K + + E Y +D R +A++ + ++ + +A
Sbjct: 416 SMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF 475
Query: 460 IWRTLLGACSIHGNIELAELVKARLAE--MDPNNSGDHVLLSNVYAVAGKWKDVVSIRRT 517
+ +LL + G+I E + +++ + + N + L+S +Y+ G +
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS-MYSKCGSIDTASRVFNF 534
Query: 518 MTEQSMVKTPGWSMIEINKVMYGFV------------AGEKPNEVT 551
M ++++ W+ + +GF G KPNEVT
Sbjct: 535 MENRNVI---SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVT 577
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 22/299 (7%)
Query: 158 THVFVGTTLISMYGECGDSESARRVFDEMPEPNV-----VTWNAAVTACFRCGDVAGARG 212
+ V LI + GD A D M + VT+++ + +C R D +
Sbjct: 24 NRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKL 83
Query: 213 VFGRMPVRNLTS----WNVMLAGYTKAGELGLARRVFSEMPL---KDDVSWSTMIVGLAH 265
V R+ ++ +N +++ Y+K+G+ A VF M +D VSWS M+ +
Sbjct: 84 VHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGN 143
Query: 266 NGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG-FLYISS 324
NG A F E L G+ PN+ T V+ AC+ + G++ GF+ K+G F
Sbjct: 144 NGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC 203
Query: 325 VNNALIDTYSKCGN-VAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE 383
V +LID + K N A VF MS ++V+WT +I G EA++ F +M
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCMQMGFPREAIRFFLDMVL 262
Query: 384 SGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEP-TIEHYGC-MVDLYGRAA 440
SG D T S+ AC+ + G ++ S + I ++ C +VD+Y + +
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGKQLHS-----WAIRSGLVDDVECSLVDMYAKCS 316
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/671 (32%), Positives = 340/671 (50%), Gaps = 48/671 (7%)
Query: 33 KCSSLKPTKQIHTHLYVTGLHTHPLFFGKLL-LHCAVTISDALHYALRLFQHFPNPDTFM 91
K SL +Q+H GL L+ ++C + +A +F + D
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR---KFGFARTVFDNMSERDLIS 383
Query: 92 YNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVAN-GGSLKPGTQLHCQ 150
+N++I F+Q+ R + PD ++ LK ++ L Q+H
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLR-CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVH 442
Query: 151 AFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGA 210
A + + FV T LI Y + A +F E ++V WNA + + D
Sbjct: 443 AIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKT 501
Query: 211 RGVFGRMPVRNLTSWNVMLAG--------------------------------------- 231
+F M + S + LA
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 561
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y K G++ A+ F +P+ DDV+W+TMI G NG ++AF F ++ G+ P+E ++
Sbjct: 562 YVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
+ A + A E G+ +H K V +L+D Y+KCG++ A +F+ + +
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
+I +W +++ GLA HG G+E LQLF +M+ G++PD +TFI +L ACSHSGLV + +
Sbjct: 682 -MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYK 740
Query: 412 IFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIH 471
M YGI+P IEHY C+ D GRA + +A I M + +A ++RTLL AC +
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQ 800
Query: 472 GNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSM 531
G+ E + V +L E++P +S +VLLSN+YA A KW ++ R M + K PG+S
Sbjct: 801 GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 860
Query: 532 IEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSV 591
IE+ ++ FV ++ N TE + K+++++ ++ E GY P+ L D+EEEEKE ++
Sbjct: 861 IEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQE-GYVPETDFTLVDVEEEEKERAL 919
Query: 592 SKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLF 651
HSEKLA AFG+ P +R++KNLRVCGDCH MK I+K Y EI++RD +RFH F
Sbjct: 920 YYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRF 979
Query: 652 KDGLCSCRDYW 662
KDG+CSC DYW
Sbjct: 980 KDGICSCGDYW 990
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 153/340 (45%), Gaps = 12/340 (3%)
Query: 73 ALHYALRLFQHFPNPDTFMYNTLIRXXXXXX--XXXXXXHPFIQMR--RHPTVFPDSFSF 128
+L YA R+F P+ D +N+++ F+ R R V+ +
Sbjct: 89 SLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTL 148
Query: 129 AFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE 188
+ LK + G + H A + G D FV L+++Y + G + + +F+EMP
Sbjct: 149 SPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY 208
Query: 189 PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTK-AGELGLARRVFSE 247
+VV WN + A G A + L + L + +G+ A +V S
Sbjct: 209 RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSF 268
Query: 248 MPLKDDVSWSTMIV---GLA---HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQA 301
D S S +I GL+ H+G + F +++ + ++V+ +L+ +
Sbjct: 269 ANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKV 328
Query: 302 GASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSI 361
+ G+ +H K G + +V+N+LI+ Y K A+ VF NMS R ++SW S+
Sbjct: 329 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS-ERDLISWNSV 387
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
IAG+A +G EA+ LF ++ G++PD T S+L A S
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 9/205 (4%)
Query: 195 NAAVTACFRCGDVAGARGV-FGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDD 253
NA ++ G AR + F P R L N +++ Y+K G L ARRVF +MP +D
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 254 VSWSTMIVGLAHNG-----SFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK 308
VSW++++ A + + QAF FR L ++ + + ++L+ +L C +G +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 309 ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMH 368
HG+ K G V AL++ Y K G V +++F M R +V W ++
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKAYLEM 224
Query: 369 GHGEEALQLFHEMEESGVRPDGITF 393
G EEA+ L SG+ P+ IT
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITL 249
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/553 (36%), Positives = 301/553 (54%), Gaps = 42/553 (7%)
Query: 141 LKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA 200
L G +H + F + +G TL++MY +CG E AR+VF++MP+ + VTW ++
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 201 ----------------CFRCG--------------DVAGARGVFGRMP---------VRN 221
R G A RG G N
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 222 LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR 281
+ + +L YT+ G + A+ VF + ++DVSW+ +I G A ++A F+ +LR
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 282 EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
+G RP+ S + AC+ G E GK +H +M KSG ++ N L+D Y+K G++
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 315
Query: 342 AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
A+ +F ++ R +VSW S++ A HG G+EA+ F EM G+RP+ I+F+S+L ACS
Sbjct: 316 ARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIW 461
HSGL+++G + MK GI P HY +VDL GRA L++A FI +MPI P A IW
Sbjct: 375 HSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIW 433
Query: 462 RTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ 521
+ LL AC +H N EL + E+DP++ G HV+L N+YA G+W D +R+ M E
Sbjct: 434 KALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKES 493
Query: 522 SMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHD 581
+ K P S +EI ++ FVA ++ + EE K E++ +++ E GY P V+
Sbjct: 494 GVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK-ELGYVPDTSHVIVH 552
Query: 582 IEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEII 641
++++E+E ++ HSEK+A AF + P G + I KN+RVCGDCHT +KL SK EII
Sbjct: 553 VDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREII 612
Query: 642 VRDRSRFHLFKDG 654
VRD +RFH FKD
Sbjct: 613 VRDTNRFHHFKDA 625
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 171/403 (42%), Gaps = 53/403 (13%)
Query: 20 SNTLEPRWV--------SLLSKCSSLKPTKQ---IHTHLYVTGLHTHPLFFGKLLLHCAV 68
SN LE ++ +LL KC+ K Q +H H+ + + H + G LL+
Sbjct: 48 SNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHI-LQSIFRHDIVMGNTLLNMYA 106
Query: 69 TISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSF 128
+L A ++F+ P D + TLI F QM R P+ F+
Sbjct: 107 KCG-SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRF-GYSPNEFTL 164
Query: 129 AFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE 188
+ +K A G QLH + GFD++V VG+ L+ +Y G + A+ VFD +
Sbjct: 165 SSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224
Query: 189 PNVVTWNAAVT-----------------------------------ACFRCGDVAGARGV 213
N V+WNA + AC G + + V
Sbjct: 225 RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 214 FGRM--PVRNLTSW--NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSF 269
M L ++ N +L Y K+G + AR++F + +D VSW++++ A +G
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFG 344
Query: 270 DQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNAL 329
+A +F E+ R GIRPNE+S VL+AC+ +G + G + M+K G + + +
Sbjct: 345 KEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTV 404
Query: 330 IDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGE 372
+D + G++ A M + + W +++ MH + E
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 156/385 (40%), Gaps = 59/385 (15%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P FS+A ++ G L+ G +H + G F G TL+ MY + G AR++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLAR 242
FD + + +VV+WN+ +TA + G FG+ V W + + +G+
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHG--------FGKEAV-----W-----WFEEMRRVGIR- 360
Query: 243 RVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG 302
+++S+ +++ +H+G D+ + ++ + ++GI P V+ +AG
Sbjct: 361 --------PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG 412
Query: 303 ASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM----AQLVFR--NMSVGRSIV 356
+ + L F+E+ +++ AL++ N + A+ VF G ++
Sbjct: 413 --DLNRALR-FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEMEESGVRPD-GITFISLLYAC-----------SHSG 404
+ +G G +A ++ +M+ESGV+ + +++ + A
Sbjct: 470 LYNIYASG----GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREE 525
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFIC------QMPISPNA 458
+ + E+ +K+K L G P H VD R L E I P
Sbjct: 526 IARKWEEVLAKIKEL-GYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTI 584
Query: 459 VIWRTLLGACSIHGNIELAELVKAR 483
I + + H I+LA V R
Sbjct: 585 HIKKNIRVCGDCHTAIKLASKVVGR 609
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/648 (34%), Positives = 336/648 (51%), Gaps = 51/648 (7%)
Query: 30 LLSKC---SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFP- 85
LL C S L+P K++H L +GL P + L S + A +LF P
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 86 -NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
D + TL+ F++MRR V D S A L
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRR-KRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRC 204
Q H A + G T V V L+ MYG+CG +R+
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRI---------------------- 168
Query: 205 GDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
F + +++ SW V+L K L R VF EMP ++ V+W+ M+ G
Sbjct: 169 ---------FEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYL 219
Query: 265 HNGSFDQAFGFFRELL-REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS 323
G + E++ R G N V+L +LSACAQ+G G+ +H + K +
Sbjct: 220 GAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGE 279
Query: 324 S-------VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQ 376
V AL+D Y+KCGN+ + VFR M R++V+W ++ +GLAMHG G +
Sbjct: 280 EASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVID 338
Query: 377 LFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLY 436
+F +M V+PD +TF ++L ACSHSG+V++G F ++ YG+EP ++HY CMVDL
Sbjct: 339 MFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLL 396
Query: 437 GRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHV 496
GRA + +A + +MP+ PN V+ +LLG+CS+HG +E+AE +K L +M P N+ +
Sbjct: 397 GRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQI 456
Query: 497 LLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHD 556
L+SN+Y G+ +R ++ ++ + K PG S I +N ++ F +G++ + T+E +
Sbjct: 457 LMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYL 516
Query: 557 KLREIMLRLRAEAGYAPQVRGVLHDIEE--EEKEDSVSKHSEKLAAAFGIAKLPKGKQLR 614
KL E++ R+R+ AGY P V G++ E EEKE ++ HSEKLA FG+ + L
Sbjct: 517 KLNEVIERIRS-AGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLL 575
Query: 615 IVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+ KNLR+C DCH+ MK++SK Y EII+RDR+RFH FK G CSC DYW
Sbjct: 576 VFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/540 (35%), Positives = 306/540 (56%), Gaps = 13/540 (2%)
Query: 15 TEEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDAL 74
T + +N P+ L C +++ KQIH + V GL ++ G+L+ ++++ AL
Sbjct: 6 TNDRTTNRRRPK---LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGAL 62
Query: 75 HYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKG 134
YA +LF P PD + N ++R + +M + V PD ++F F LK
Sbjct: 63 KYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKR-GVSPDRYTFTFVLKA 121
Query: 135 VANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTW 194
+ G H + RHGF + +V LI + CGD A +FD+ + + V W
Sbjct: 122 CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 181
Query: 195 NAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV 254
++ + + G + A +F MP ++ +WNVM+ G K E+ AR +F KD V
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM 314
+W+ MI G + G +A G F+E+ G P+ V++ +LSACA G E GK LH ++
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 315 EK----SGFLYISS-VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHG 369
+ S +Y+ + + NALID Y+KCG++ A VFR + R + +W ++I GLA+H
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK-DRDLSTWNTLIVGLALH- 359
Query: 370 HGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHY 429
H E ++++F EM+ V P+ +TFI ++ ACSHSG V++G + FS M+++Y IEP I+HY
Sbjct: 360 HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHY 419
Query: 430 GCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDP 489
GCMVD+ GRA +L +A+ F+ M I PNA++WRTLLGAC I+GN+EL + +L M
Sbjct: 420 GCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRK 479
Query: 490 NNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIE--INKVMYGFVAGEKP 547
+ SGD+VLLSN+YA G+W V +R+ + + K G S+IE +K+M ++ +P
Sbjct: 480 DESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEP 539
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/538 (37%), Positives = 308/538 (57%), Gaps = 38/538 (7%)
Query: 35 SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNT 94
++LK KQ H ++ +TGL+ L K + C + + L YA +F H P P+T+++NT
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEAC--SNAGHLRYAYSVFTHQPCPNTYLHNT 83
Query: 95 LIRXXXXXXXXXXXXHPFIQMRRHPTVF--PDSFSFAFALKGVANGGSLKPGTQLHCQAF 152
+IR R+ + PD+F+F F LK + G Q+H Q
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV 143
Query: 153 RHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARG 212
GFD+ V V T LI MY F CG + AR
Sbjct: 144 VFGFDSSVHVVTGLIQMY-------------------------------FSCGGLGDARK 172
Query: 213 VFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMP--LKDDVSWSTMIVGLAHNGSFD 270
+F M V+++ WN +LAGY K GE+ AR + MP ++++VSW+ +I G A +G
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 271 QAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALI 330
+A F+ +L E + P+EV+L VLSACA G+ E G+ + +++ G S+NNA+I
Sbjct: 233 EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 331 DTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDG 390
D Y+K GN+ A VF ++ R++V+WT+IIAGLA HGHG EAL +F+ M ++GVRP+
Sbjct: 293 DMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPND 351
Query: 391 ITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFIC 450
+TFI++L ACSH G V+ G +F+ M++ YGI P IEHYGCM+DL GRA +L +A E I
Sbjct: 352 VTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Query: 451 QMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKD 510
MP NA IW +LL A ++H ++EL E + L +++PNNSG+++LL+N+Y+ G+W +
Sbjct: 412 SMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDE 471
Query: 511 VVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAE 568
+R M + K G S IE+ +Y F++G+ + E H+ L+E+ L+++++
Sbjct: 472 SRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQSK 529
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 325/652 (49%), Gaps = 73/652 (11%)
Query: 81 FQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGS 140
F+ P+ D +N LI + M R + + LK ++ G
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 141 LKPGTQLHCQAFRHGFDTHVFVGTTLISMYGE---------------------------- 172
+ G Q+H Q + GF++++ VG+ L+ MY
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 173 ---CGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL------- 222
CG E A ++F M E + V+W A + + G A F M V+ L
Sbjct: 215 LLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 223 -------------------------TSW-------NVMLAGYTKAGELGLARRVFSEMPL 250
T++ + ++ Y K L A+ VF M
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 251 KDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKIL 310
K+ VSW+ M+VG G ++A F ++ R GI P+ +L +SACA + E G
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 311 HGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH 370
HG SG ++ +V+N+L+ Y KCG++ + +F M+V R VSWT++++ A G
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGR 452
Query: 371 GEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYG 430
E +QLF +M + G++PDG+T ++ ACS +GLVE+G F M + YGI P+I HY
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 431 CMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPN 490
CM+DL+ R+ RL +A FI MP P+A+ W TLL AC GN+E+ + L E+DP+
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH 572
Query: 491 NSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEV 550
+ + LLS++YA GKW V +RR M E+++ K PG S I+ ++ F A ++ +
Sbjct: 573 HPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPY 632
Query: 551 TEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKG 610
++ + KL E+ ++ + GY P V HD+EE K ++ HSE+LA AFG+ +P G
Sbjct: 633 LDQIYAKLEELNNKI-IDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSG 691
Query: 611 KQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+ +R+ KNLRVC DCH K IS EI+VRD RFH FKDG CSC D+W
Sbjct: 692 QPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 162/346 (46%), Gaps = 19/346 (5%)
Query: 160 VFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV 219
F+ ++ Y S ARRVFD +P+PN+ +WN + A + G ++ F ++P
Sbjct: 41 TFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPD 100
Query: 220 RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKD------DVSWSTMIVGLAHNGSFDQAF 273
R+ +WNV++ GY+ +G +G A + ++ M ++D V+ TM+ + NG
Sbjct: 101 RDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSANLTRVTLMTMLKLSSSNGHVSLGK 159
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGA-SEFGKILHGFMEKSGFLYISSVNNALIDT 332
++++ G + + +L A G S+ K+ +G +++ +Y N+L+
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMY-----NSLMGG 214
Query: 333 YSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGIT 392
CG + A +FR M + VSW ++I GLA +G +EA++ F EM+ G++ D
Sbjct: 215 LLACGMIEDALQLFRGME--KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYP 272
Query: 393 FISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM 452
F S+L AC G + +G +I + + + I ++D+Y + LH A +M
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331
Query: 453 PISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLL 498
N V W ++ G E E VK L DH L
Sbjct: 332 K-QKNVVSWTAMVVGYGQTGRAE--EAVKIFLDMQRSGIDPDHYTL 374
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 167/393 (42%), Gaps = 44/393 (11%)
Query: 29 SLLSKCSSL---KPTKQIHTHLYVTGLHTHPLFFGKLL--LHCAVTISDALHYALRLFQH 83
S+L C L KQIH + T H ++ G L ++C LHYA +F
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDH-IYVGSALIDMYCKCK---CLHYAKTVFDR 330
Query: 84 FPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKP 143
+ + ++ F+ M+R + PD ++ A+ AN SL+
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR-SGIDPDHYTLGQAISACANVSSLEE 389
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
G+Q H +A G +V V +L+++YG+CGD + + R+F+EM + V+W A V+A +
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ 449
Query: 204 CGDVAGARGVFGRMPVRNLTSWNVMLAGY----TKAGELGLARRVFSEMPLKDDV----- 254
G +F +M L V L G ++AG + +R F M + +
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 509
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK-ILHGF 313
+S MI + +G ++A F + P+ + T +LSAC G E GK
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGM---PFPPDAIGWTTLLSACRNKGNLEIGKWAAESL 566
Query: 314 ME-----KSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV----GRSIVSWTSIIAG 364
+E +G+ +SS+ + K +VA + R +V G+S + W +
Sbjct: 567 IELDPHHPAGYTLLSSI----YASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHS 622
Query: 365 LAMHGHGEEAL-QLFHEMEE-------SGVRPD 389
+ L Q++ ++EE +G +PD
Sbjct: 623 FSADDESSPYLDQIYAKLEELNNKIIDNGYKPD 655
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/679 (32%), Positives = 347/679 (51%), Gaps = 57/679 (8%)
Query: 30 LLSKC---SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPN 86
LL +C S+ K I H+ +G G L+ ++ D + YA ++F
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAE--ISGSKLVDASLKCGD-IDYARQVFDGMSE 127
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
+N+LI + M + V PD ++ + K ++ K +
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN-NVLPDEYTLSSVFKAFSDLSLEKEAQR 186
Query: 147 LHCQAFRHGFD-THVFVGTTLISMYGECGDSESARRVFDEMPE----------------- 188
H A G + ++VFVG+ L+ MY + G + A+ V D + E
Sbjct: 187 SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 189 ------------------PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRN----LTSWN 226
PN T+ + + +C D+ + + G M L S
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQT 306
Query: 227 VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
+L Y + + + RVF + + VSW+++I GL NG + A FR+++R+ I+P
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKP 366
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
N +L+ L C+ E G+ +HG + K GF + LID Y KCG MA+LVF
Sbjct: 367 NSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVF 426
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLV 406
+S ++S ++I A +G G EAL LF M G++P+ +T +S+L AC++S LV
Sbjct: 427 DTLS-EVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLV 485
Query: 407 EQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLG 466
E+GCE+F + I T +HY CMVDL GRA RL +A E + I+P+ V+WRTLL
Sbjct: 486 EEGCELFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLS 543
Query: 467 ACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKT 526
AC +H +E+AE + ++ E++P + G +L+SN+YA GKW V+ ++ M + + K
Sbjct: 544 ACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKN 603
Query: 527 PGWSMIEINKVMYGFVAGE---KPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIE 583
P S +EINK + F+AG+ PN +E+ + L E++ + + + GY V D+E
Sbjct: 604 PAMSWVEINKETHTFMAGDLFSHPN--SEQILENLEELIKKSK-DLGYVEDKSCVFQDME 660
Query: 584 EEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVR 643
E KE S+ +HSEKLA AF + + G +RI+KNLRVC DCH+ +K++S+ + EII R
Sbjct: 661 ETAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICR 719
Query: 644 DRSRFHLFKDGLCSCRDYW 662
D RFH F+DG CSC DYW
Sbjct: 720 DSKRFHHFRDGSCSCGDYW 738
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 28/291 (9%)
Query: 24 EPRWVSLLSKCSSLKPT---KQIHTHLYVTGLHTHPLFFGKLL---LHCAVTISDALHYA 77
E + S+L C +LK K IH + +G + LL L C++ + D+L
Sbjct: 267 EYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL-VDDSL--- 322
Query: 78 LRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVAN 137
R+F+ P+ + +LI F +M R ++ P+SF+ + AL+G +N
Sbjct: 323 -RVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR-DSIKPNSFTLSSALRGCSN 380
Query: 138 GGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAA 197
+ G Q+H ++GFD + G+ LI +YG+CG S+ AR VFD + E +V++ N
Sbjct: 381 LAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTM 440
Query: 198 VTACFRCGDVAGARGVFGRM-----PVRNLTSWNVMLAGYT-----KAGELGLARRVFSE 247
+ + + G A +F RM ++T +V+LA + EL + R
Sbjct: 441 IYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKI 500
Query: 248 MPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC 298
M D ++ M+ L G ++A L E I P+ V +LSAC
Sbjct: 501 MLTND--HYACMVDLLGRAGRLEEA----EMLTTEVINPDLVLWRTLLSAC 545
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 22/237 (9%)
Query: 276 FRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSK 335
F +LLR+ I +E S++G+ K + M KSGF S + L+D K
Sbjct: 68 FSQLLRQCI--DERSISGI-------------KTIQAHMLKSGFPAEIS-GSKLVDASLK 111
Query: 336 CGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFIS 395
CG++ A+ VF MS R IV+W S+IA L H +EA++++ M + V PD T S
Sbjct: 112 CGDIDYARQVFDGMS-ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 396 LLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYG-CMVDLYGRAARLHKAYEFICQMPI 454
+ A S L E+ + + + G+E + G +VD+Y + + +A + +
Sbjct: 171 VFKAFSDLSL-EKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREA-KLVLDRVE 228
Query: 455 SPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDV 511
+ V+ L+ S G E E VKA + + + ++V G KD+
Sbjct: 229 EKDVVLITALIVGYSQKG--EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDI 283
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/557 (34%), Positives = 298/557 (53%), Gaps = 42/557 (7%)
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA---------- 196
LHC+ + H F+G L+ Y G A ++FDEMPE ++V+WN+
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 197 ---------------------------AVTACFRCGDVAGARGVFGRM----PVRNLTSW 225
++AC G R + G + + +
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N + Y K G+L + ++F ++ +K+ VSW+TMIV NG ++ +F R G
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
P++ + VL +C G + +HG + GF + AL+D YSK G + + V
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
F ++ S+ +WT+++A A HG G +A++ F M G+ PD +TF LL ACSHSGL
Sbjct: 293 FHEITSPDSM-AWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGL 351
Query: 406 VEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL 465
VE+G F M Y I+P ++HY CMVDL GR+ L AY I +MP+ P++ +W LL
Sbjct: 352 VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Query: 466 GACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVK 525
GAC ++ + +L RL E++P + ++V+LSN+Y+ +G WKD IR M ++ +V+
Sbjct: 412 GACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVR 471
Query: 526 TPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEE 585
G S IE ++ FV G+ + +E+ KL+EI ++++E GY + VLHD+ E+
Sbjct: 472 ASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGED 531
Query: 586 EKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDR 645
KE+ +++HSEK+A AFG+ + + + I KNLR+CGDCH K IS + II+RD
Sbjct: 532 VKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDS 591
Query: 646 SRFHLFKDGLCSCRDYW 662
RFH F DG CSC DYW
Sbjct: 592 KRFHHFLDGSCSCSDYW 608
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 186/463 (40%), Gaps = 60/463 (12%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNP 87
++ + C S++ + +H + + + H F G L+ C + + + A +LF P
Sbjct: 38 IAAVKSCVSIELCRLLHCKVVKSVSYRHG-FIGDQLVGCYLRLGHDV-CAEKLFDEMPER 95
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVF-PDSFSFAFALKGVANGGSLKPGTQ 146
D +N+LI +M F P+ +F + GGS + G
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN----------- 195
+H + G V V I+ YG+ GD S+ ++F+++ N+V+WN
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGL 215
Query: 196 ------------------------AAVTACFRCGDVAGARGVFGRMPVRNLTS----WNV 227
A + +C G V A+G+ G + +
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
+L Y+K G L + VF E+ D ++W+ M+ A +G A F ++ GI P+
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPD 335
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS---SVNNALIDTYSKCGNVAMAQL 344
V+ T +L+AC+ +G E GK H F S I + ++D + G + A
Sbjct: 336 HVTFTHLLNACSHSGLVEEGK--HYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYG 393
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGH---GEEALQLFHEMEESGVRPDGITFISLLYACS 401
+ + M + S W +++ ++ G +A + E+E DG ++ L S
Sbjct: 394 LIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPR----DGRNYVMLSNIYS 449
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHK 444
SGL + S+++NL + + GC +G ++HK
Sbjct: 450 ASGLWKDA----SRIRNLMKQKGLVRASGCSYIEHGN--KIHK 486
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/557 (35%), Positives = 305/557 (54%), Gaps = 42/557 (7%)
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV------- 198
+LHC + + F + V ++ Y +CG A+RVF + V +WNA +
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 199 ----------------------------TACFRCGDVAGARGVFGRMP----VRNLTSWN 226
+AC + + + V G + R+L +
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 227 VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
+L+ Y GEL + +F M K VSW+T+I G NG D+A G FR+++ GI+
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
+S+ V AC+ + G+ H + K + + +LID Y+K G++ + VF
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLV 406
+ +S SW ++I G +HG +EA++LF EM+ +G PD +TF+ +L AC+HSGL+
Sbjct: 656 NGLK-EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLI 714
Query: 407 EQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQ-MPISPNAVIWRTLL 465
+G +MK+ +G++P ++HY C++D+ GRA +L KA + + M + IW++LL
Sbjct: 715 HEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 774
Query: 466 GACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVK 525
+C IH N+E+ E V A+L E++P ++VLLSN+YA GKW+DV +R+ M E S+ K
Sbjct: 775 SSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRK 834
Query: 526 TPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEE 585
G S IE+N+ ++ FV GE+ + EE L I+ ++ GY P V HD+ EE
Sbjct: 835 DAGCSWIELNRKVFSFVVGERFLDGFEEIK-SLWSILEMKISKMGYRPDTMSVQHDLSEE 893
Query: 586 EKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDR 645
EK + + HSEKLA +G+ K +G +R+ KNLR+C DCH KLISK + EI+VRD
Sbjct: 894 EKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDN 953
Query: 646 SRFHLFKDGLCSCRDYW 662
RFH FK+G+CSC DYW
Sbjct: 954 KRFHHFKNGVCSCGDYW 970
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 162/379 (42%), Gaps = 48/379 (12%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
+F + + F +N +I FI+M + PD F++ +K A
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT 199
+ G +H + G VFVG L+S YG G A ++FD MPE N+V+WN+ +
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 200 A---------------------------------------CFRCGDVAGARGVFG----- 215
C R ++ +GV G
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 216 RMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGF 275
R+ + L N ++ Y+K G + A+ +F K+ VSW+TM+ G + G F
Sbjct: 322 RLD-KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 276 FRELLR--EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
R++L E ++ +EV++ + C K LH + K F+Y V NA + +Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
+KCG+++ AQ VF + +++ SW ++I G A +L +M+ SG+ PD T
Sbjct: 441 AKCGSLSYAQRVFHGIR-SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 394 ISLLYACSHSGLVEQGCEI 412
SLL ACS + G E+
Sbjct: 500 CSLLSACSKLKSLRLGKEV 518
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 160/371 (43%), Gaps = 47/371 (12%)
Query: 73 ALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFAL 132
+L YA R+F + +N LI +QM+ + PDSF+ L
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLL 503
Query: 133 KGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVV 192
+ SL+ G ++H R+ + +FV +++S+Y CG+ + + +FD M + ++V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 193 TWNAAVTACFRCGDVAGARGVFGR-------------MPV-------------------- 219
+WN +T + G A GVF + MPV
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 220 -RNLTSWNVMLAG-----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAF 273
++L + +A Y K G + + +VF+ + K SW+ MI+G +G +A
Sbjct: 624 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 683
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNA-LIDT 332
F E+ R G P++++ GVL+AC +G G M+ S L + + A +ID
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 333 YSKCGNVAMA-QLVFRNMSVGRSIVSWTSIIAGLAMHGH---GEEALQLFHEMEESGVRP 388
+ G + A ++V MS + W S+++ +H + GE+ E+E +P
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE--KP 801
Query: 389 DGITFISLLYA 399
+ +S LYA
Sbjct: 802 ENYVLLSNLYA 812
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 8/251 (3%)
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR-EGIRP 286
++ Y G +R VF + K+ W+ +I + N +D+ F E++ + P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
+ + V+ ACA G +HG + K+G + V NAL+ Y G V A +F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHE-MEESG---VRPDGITFISLLYACSH 402
M R++VSW S+I + +G EE+ L E MEE+G PD T +++L C+
Sbjct: 246 DIMP-ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWR 462
+ G + L ++ + ++D+Y + + A + I +M + N V W
Sbjct: 305 EREIGLGKGVHGWAVKLR-LDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWN 362
Query: 463 TLLGACSIHGN 473
T++G S G+
Sbjct: 363 TMVGGFSAEGD 373
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 292/523 (55%), Gaps = 34/523 (6%)
Query: 23 LEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQ 82
+E ++ L + S K+I+ + + GL K++ C I D + YA RLF
Sbjct: 9 VENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIED-MDYATRLFN 66
Query: 83 HFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLK 142
NP+ F+YN++IR + Q+ R PD F+F F K A+ GS
Sbjct: 67 QVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY 126
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACF 202
G Q+H + G P +VVT NA +
Sbjct: 127 LGKQVHGHLCKFG-------------------------------PRFHVVTENALIDMYM 155
Query: 203 RCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
+ D+ A VF M R++ SWN +L+GY + G++ A+ +F M K VSW+ MI G
Sbjct: 156 KFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISG 215
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
G + +A FFRE+ GI P+E+SL VL +CAQ G+ E GK +H + E+ GFL
Sbjct: 216 YTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQ 275
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
+ V NALI+ YSKCG ++ A +F M G+ ++SW+++I+G A HG+ A++ F+EM+
Sbjct: 276 TGVCNALIEMYSKCGVISQAIQLFGQME-GKDVISWSTMISGYAYHGNAHGAIETFNEMQ 334
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
+ V+P+GITF+ LL ACSH G+ ++G F M+ Y IEP IEHYGC++D+ RA +L
Sbjct: 335 RAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKL 394
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVY 502
+A E MP+ P++ IW +LL +C GN+++A + L E++P + G++VLL+N+Y
Sbjct: 395 ERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIY 454
Query: 503 AVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGE 545
A GKW+DV +R+ + ++M KTPG S+IE+N ++ FV+G+
Sbjct: 455 ADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGD 497
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/570 (34%), Positives = 304/570 (53%), Gaps = 41/570 (7%)
Query: 132 LKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNV 191
L+ A G++ H + R + V + LI+ Y +CG E AR+VFD M E ++
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 192 VTWNAAVTACFRCGDVAGARGVFGRMPVR------------------------------- 220
V+WN + R + A +F M
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 221 --------NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQA 272
NL +L Y K G + A +VF M K V+WS+M+ G N ++++A
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 273 FGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDT 332
+R R + N+ +L+ V+ AC+ A GK +H + KSGF V ++ +D
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307
Query: 333 YSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGIT 392
Y+KCG++ + ++F + +++ W +II+G A H +E + LF +M++ G+ P+ +T
Sbjct: 308 YAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 393 FISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM 452
F SLL C H+GLVE+G F M+ YG+ P + HY CMVD+ GRA L +AYE I +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 453 PISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVV 512
P P A IW +LL +C ++ N+ELAE+ +L E++P N+G+HVLLSN+YA +W+++
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 513 SIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYA 572
R+ + + + K G S I+I ++ F GE + E L ++++ R + GY
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFR-KFGYK 545
Query: 573 PQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLI 632
P V LHD+E +KE+ + +HSEKLA FG+ LP+ +RI+KNLR+C DCH MK
Sbjct: 546 PSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAA 605
Query: 633 SKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
S + IIVRD +RFH F DG CSC D+W
Sbjct: 606 SMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 164/334 (49%), Gaps = 19/334 (5%)
Query: 181 RVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR-----NLTSWNVMLAGYTKA 235
R +E N+V + + C R G V A+ G++ +R ++T NV++ Y+K
Sbjct: 53 RYSNEFSNRNLV--HEILQLCARNGAVMEAKACHGKI-IRIDLEGDVTLLNVLINAYSKC 109
Query: 236 GELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
G + LAR+VF M + VSW+TMI N +A F E+ EG + +E +++ VL
Sbjct: 110 GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVL 169
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI 355
SAC + K LH K+ V AL+D Y+KCG + A VF +M +S
Sbjct: 170 SACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSS 228
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
V+W+S++AG + + EEAL L+ + + + T S++ ACS+ + +G ++ +
Sbjct: 229 VTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV 288
Query: 416 M-KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNI 474
+ K+ +G + VD+Y + L ++Y ++ N +W T++ + H
Sbjct: 289 ICKSGFGSNVFVASSA--VDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARP 345
Query: 475 ELAELVKARLAE--MDPNNSGDHVLLSNVYAVAG 506
+ ++ ++ + M PN V S++ +V G
Sbjct: 346 KEVMILFEKMQQDGMHPN----EVTFSSLLSVCG 375
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 136/323 (42%), Gaps = 41/323 (12%)
Query: 92 YNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQA 151
+NT+I F++MR F + F+ + L +LHC +
Sbjct: 130 WNTMIGLYTRNRMESEALDIFLEMRNEGFKFSE-FTISSVLSACGVNCDALECKKLHCLS 188
Query: 152 FRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGAR 211
+ D +++VGT L+ +Y +CG + A +VF+ M + + VTW++ V + + A
Sbjct: 189 VKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEAL 248
Query: 212 GVFGRM-----------------PVRNLTSW-----------------NVMLAG-----Y 232
++ R NL + NV +A Y
Sbjct: 249 LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMY 308
Query: 233 TKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLT 292
K G L + +FSE+ K+ W+T+I G A + + F ++ ++G+ PNEV+ +
Sbjct: 309 AKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFS 368
Query: 293 GVLSACAQAGASEFGKILHGFMEKSGFLYISSVN-NALIDTYSKCGNVAMAQLVFRNMSV 351
+LS C G E G+ M + L + V+ + ++D + G ++ A + +++
Sbjct: 369 SLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPF 428
Query: 352 GRSIVSWTSIIAGLAMHGHGEEA 374
+ W S++A ++ + E A
Sbjct: 429 DPTASIWGSLLASCRVYKNLELA 451
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/482 (39%), Positives = 285/482 (59%), Gaps = 11/482 (2%)
Query: 190 NVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG----YTKAGELGLARRVF 245
N ++ + A+ C + GD+ G + G++ S ++++ Y+ A +VF
Sbjct: 112 NPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVF 171
Query: 246 SEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE---GIRPNEVSLTGVLSACAQAG 302
E+P +D VSW+ + N F ++ + ++P+ V+ L ACA G
Sbjct: 172 DEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLG 231
Query: 303 ASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSII 362
A +FGK +H F++++G +++N L+ YS+CG++ A VF M R++VSWT++I
Sbjct: 232 ALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALI 290
Query: 363 AGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN-LYG 421
+GLAM+G G+EA++ F+EM + G+ P+ T LL ACSHSGLV +G F +M++ +
Sbjct: 291 SGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFK 350
Query: 422 IEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVK 481
I+P + HYGC+VDL GRA L KAY I M + P++ IWRTLLGAC +HG++EL E V
Sbjct: 351 IKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVI 410
Query: 482 ARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGF 541
+ L E+ +GD+VLL N Y+ GKW+ V +R M E+ + PG S IE+ ++ F
Sbjct: 411 SHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEF 470
Query: 542 VAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIE-EEEKEDSVSKHSEKLAA 600
+ + + EE + L EI +L+ AGY ++ LH++E EEEK ++ HSEKLA
Sbjct: 471 IVDDVSHPRKEEIYKMLAEINQQLKI-AGYVAEITSELHNLESEEEKGYALRYHSEKLAI 529
Query: 601 AFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRD 660
AFGI P G +R+ KNLR C DCH K +S Y +IVRDRSRFH FK G CSC D
Sbjct: 530 AFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCND 589
Query: 661 YW 662
+W
Sbjct: 590 FW 591
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 192/443 (43%), Gaps = 46/443 (10%)
Query: 20 SNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVT-ISDALHYAL 78
S++ + +SL+ + +QIH L T L + F L A++ I ++Y+
Sbjct: 7 SSSGDDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSC 66
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
R+F NP NT+IR F +RR+ ++ + S +FALK
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA-- 196
G L G Q+H + F GF + + TTL+ +Y C +S A +VFDE+P+ + V+WN
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 197 ------------------------------------AVTACFRCGDVAGARGVFGRMPVR 220
A+ AC G + + V +
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN 246
Query: 221 NLTSW----NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
L+ N +++ Y++ G + A +VF M ++ VSW+ +I GLA NG +A F
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAF 306
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN--ALIDTYS 334
E+L+ GI P E +LTG+LSAC+ +G G + M F ++++ ++D
Sbjct: 307 NEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLG 366
Query: 335 KCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFI 394
+ + A + ++M + W +++ +HG E ++ + E G ++
Sbjct: 367 RARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAG-DYV 425
Query: 395 SLLYACSHSGLVEQGCEIFSKMK 417
LL S G E+ E+ S MK
Sbjct: 426 LLLNTYSTVGKWEKVTELRSLMK 448
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/520 (36%), Positives = 303/520 (58%), Gaps = 11/520 (2%)
Query: 152 FRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM----PEPNVVTWNAAVTACFRCGDV 207
FR D F T+I Y E A ++EM EP+ T+ + AC R +
Sbjct: 89 FRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148
Query: 208 AGARGVFGRMPVRNLTS----WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGL 263
+ + G++ L + N ++ Y + GE+ L+ VF ++ K SWS+M+
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSAR 208
Query: 264 AHNGSFDQAFGFFRELLRE-GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
A G + + FR + E ++ E + L ACA GA G +HGF+ ++
Sbjct: 209 AGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELN 268
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
V +L+D Y KCG + A +F+ M R+ ++++++I+GLA+HG GE AL++F +M
Sbjct: 269 IIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
+ G+ PD + ++S+L ACSHSGLV++G +F++M +EPT EHYGC+VDL GRA L
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVY 502
+A E I +PI N VIWRT L C + NIEL ++ L ++ +N GD++L+SN+Y
Sbjct: 388 EEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLY 447
Query: 503 AVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIM 562
+ W DV R + + + +TPG+S++E+ + FV+ ++ + +E + L ++
Sbjct: 448 SQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQME 507
Query: 563 LRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVC 622
+L+ E GY+P + +L +++EEEK++ + HS+K+A AFG+ P G ++I +NLR+C
Sbjct: 508 WQLKFE-GYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMC 566
Query: 623 GDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
DCHT K IS Y+ EI+VRDR+RFHLFK G CSC+DYW
Sbjct: 567 SDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 187/409 (45%), Gaps = 49/409 (11%)
Query: 2 PLMSYFIPTPSSGTEEAMSNTL---EPRWVSLLSKCSSLKPTKQIHTH-LYVTGLHTHPL 57
P++ + + T N E + LL +C ++ KQ+H + ++ ++
Sbjct: 5 PILQSLLASRDDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSF 64
Query: 58 FFGKLLLHCAVT-ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMR 116
+L CA + ++++YA +F+ +P TF +NT+IR + +M
Sbjct: 65 SASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMM 124
Query: 117 RHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDS 176
+ PD+F++ LK S++ G Q+H Q F+ G + VFV +LI+MYG CG+
Sbjct: 125 QRGNE-PDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEM 183
Query: 177 ESARRVFDEMPEPNVVTWNAAVT------------------------------------A 200
E + VF+++ +W++ V+ A
Sbjct: 184 ELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLA 243
Query: 201 CFRCGDVAGARGVFGRMPVRNLTSWNVMLAG-----YTKAGELGLARRVFSEMPLKDDVS 255
C G + + G + +RN++ N+++ Y K G L A +F +M +++++
Sbjct: 244 CANTGALNLGMSIHGFL-LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLT 302
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
+S MI GLA +G + A F ++++EG+ P+ V VL+AC+ +G + G+ + M
Sbjct: 303 YSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEML 362
Query: 316 KSGFLYISSVN-NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIA 363
K G + ++ + L+D + G + A +++ + ++ V W + ++
Sbjct: 363 KEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 361 bits (926), Expect = e-99, Method: Compositional matrix adjust.
Identities = 243/693 (35%), Positives = 348/693 (50%), Gaps = 59/693 (8%)
Query: 18 AMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYA 77
A S L +V+L SKC L + Y T P F ++ A +H A
Sbjct: 40 ASSTYLSNHFVNLYSKCGRLSYAR---AAFYST---EEPNVFSYNVIVKAYAKDSKIHIA 93
Query: 78 LRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVAN 137
+LF P PDT YNTLI F +MR+ D F+ + + +
Sbjct: 94 RQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK-LGFEVDGFTLSGLIAACCD 152
Query: 138 GGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE-PNVVTWNA 196
L QLHC + GFD++ V ++ Y + G A VF M E + V+WN+
Sbjct: 153 RVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNS 210
Query: 197 AVTACFRCGDVAGARGVFGRMPVRN--------------LTSWNVMLAGYTKAGEL---- 238
+ A + + A A ++ M + LTS + ++ G G+L
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 239 ---------GL---------------ARRVFSEMPLKDDVSWSTMIVGLAHNGSF-DQAF 273
GL + +VF E+ D V W+TMI G + N ++A
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAV 330
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS-SVNNALIDT 332
FR++ R G RP++ S V SAC+ + K +HG KS SVNNALI
Sbjct: 331 KSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISL 390
Query: 333 YSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGIT 392
Y K GN+ A+ VF M + VS+ +I G A HGHG EAL L+ M +SG+ P+ IT
Sbjct: 391 YYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 393 FISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM 452
F+++L AC+H G V++G E F+ MK + IEP EHY CM+DL GRA +L +A FI M
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Query: 453 PISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVV 512
P P +V W LLGAC H N+ LAE L M P + +V+L+N+YA A KW+++
Sbjct: 510 PYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMA 569
Query: 513 SIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYA 572
S+R++M + + K PG S IE+ K + FVA + + + E ++ L E+M +++ + GY
Sbjct: 570 SVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMK-KVGYV 628
Query: 573 PQVRGVLHDIEEEEKEDSVSK---HSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVM 629
+ + +E + D + HSEKLA AFG+ G++L +VKNLR+CGDCH +
Sbjct: 629 MDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAI 688
Query: 630 KLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
K +S EIIVRD RFH FKDG CSC DYW
Sbjct: 689 KFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 149/349 (42%), Gaps = 39/349 (11%)
Query: 132 LKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNV 191
LK VA L G LH + + ++ +++Y +CG AR F EPNV
Sbjct: 16 LKSVAER-DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNV 74
Query: 192 VTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLK 251
++N V A + + AR +F +P + S+N +++GY AR F+ M L
Sbjct: 75 FSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYAD------ARETFAAMVL- 127
Query: 252 DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILH 311
F+ + + G + +L+G+++AC + K LH
Sbjct: 128 ------------------------FKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLH 161
Query: 312 GFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHG 371
F GF SSVNNA + YSK G + A VF M R VSW S+I H G
Sbjct: 162 CFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEG 221
Query: 372 EEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGC 431
+AL L+ EM G + D T S+L A + + G + K+ G
Sbjct: 222 AKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA-GFHQNSHVGSG 280
Query: 432 MVDLYGRAARLHKAY--EFICQMPISPNAVIWRTLLGACSIHGNIELAE 478
++D Y + Y E + Q +SP+ V+W T++ S+ N EL+E
Sbjct: 281 LIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM--NEELSE 327
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/623 (31%), Positives = 318/623 (51%), Gaps = 43/623 (6%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
+F+ P D +N+L+ M + +F AL
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPD 376
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT 199
+ G LH G + +G L+SMYG+ G+ +RRV +MP +VV WNA +
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 436
Query: 200 ACFRCGDVAGARGVFGRMPVRNLTS----------------------------------- 224
D A F M V ++S
Sbjct: 437 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 496
Query: 225 -----WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL 279
N ++ Y K G+L ++ +F+ + ++ ++W+ M+ AH+G ++ ++
Sbjct: 497 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556
Query: 280 LREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNV 339
G+ ++ S + LSA A+ E G+ LHG K GF + S + NA D YSKCG +
Sbjct: 557 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 616
Query: 340 AMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA 399
+ SV RS+ SW +I+ L HG+ EE FHEM E G++P +TF+SLL A
Sbjct: 617 GEVVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 675
Query: 400 CSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAV 459
CSH GLV++G + + +G+EP IEH C++DL GR+ RL +A FI +MP+ PN +
Sbjct: 676 CSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL 735
Query: 460 IWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMT 519
+WR+LL +C IHGN++ L++++P + +VL SN++A G+W+DV ++R+ M
Sbjct: 736 VWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMG 795
Query: 520 EQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVL 579
+++ K S +++ + F G++ + T E + KL +I +L E+GY L
Sbjct: 796 FKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK-KLIKESGYVADTSQAL 854
Query: 580 HDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVE 639
D +EE+KE ++ HSE+LA A+ + P+G +RI KNLR+C DCH+V K +S+
Sbjct: 855 QDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRR 914
Query: 640 IIVRDRSRFHLFKDGLCSCRDYW 662
I++RD+ RFH F+ GLCSC+DYW
Sbjct: 915 IVLRDQYRFHHFERGLCSCKDYW 937
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 211/492 (42%), Gaps = 52/492 (10%)
Query: 29 SLLSKC----SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHF 84
SL++ C S + Q+H + +GL + ++ +LH + + + ++F+
Sbjct: 63 SLVTACGRSGSMFREGVQVHGFVAKSGLLS-DVYVSTAILHL-YGVYGLVSCSRKVFEEM 120
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPT-VFPDSFSFAFALKGVANGGSLKP 143
P+ + + +L+ + MR +S S + G+ SL
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL-- 178
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
G Q+ Q + G ++ + V +LISM G G+ + A +FD+M E + ++WN+ A +
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 204 CGDVAGARGVFGRM----------PVRNLTS---------W------------------- 225
G + + +F M V L S W
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 226 -NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
N +L Y AG A VF +MP KD +SW++++ ++G A G ++ G
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
N V+ T L+AC E G+ILHG + SG Y + NAL+ Y K G ++ ++
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
V M R +V+W ++I G A ++AL F M GV + IT +S+L AC G
Sbjct: 419 VLLQMP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 477
Query: 405 -LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRT 463
L+E+G + + + + G E ++ +Y + L + + + + N + W
Sbjct: 478 DLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNA 535
Query: 464 LLGACSIHGNIE 475
+L A + HG+ E
Sbjct: 536 MLAANAHHGHGE 547
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 182/431 (42%), Gaps = 44/431 (10%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A LF P + +NT++ F +M + P SF A +
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKPSSFVIASLVTACG 69
Query: 137 NGGSL-KPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN 195
GS+ + G Q+H + G + V+V T ++ +YG G +R+VF+EMP+ NVV+W
Sbjct: 70 RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 129
Query: 196 A-----------------------------------AVTACFRCGDVAGARGVFGRMPVR 220
+ +++C D + R + G++
Sbjct: 130 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 189
Query: 221 NLTSW----NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
L S N +++ G + A +F +M +D +SW+++ A NG +++F F
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
+ R N +++ +LS ++G+ +HG + K GF + V N L+ Y+
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 309
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
G A LVF+ M + ++SW S++A G +AL L M SG + +TF S
Sbjct: 310 GRSVEANLVFKQMPT-KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 368
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISP 456
L AC E+G I + + G+ +V +YG+ + ++ + QMP
Sbjct: 369 LAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RR 426
Query: 457 NAVIWRTLLGA 467
+ V W L+G
Sbjct: 427 DVVAWNALIGG 437
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 129/248 (52%), Gaps = 10/248 (4%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
YTK G + AR +F MP++++VSW+TM+ G+ G + + FFR++ GI+P+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 292 TGVLSACAQAGAS-EFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS 350
+++AC ++G+ G +HGF+ KSG L V+ A++ Y G V+ ++ VF M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 351 VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQ-- 408
R++VSWTS++ G + G EE + ++ M GV G S+ S GL++
Sbjct: 122 -DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGV---GCNENSMSLVISSCGLLKDES 177
Query: 409 -GCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA 467
G +I ++ G+E + ++ + G + A QM + + W ++ A
Sbjct: 178 LGRQIIGQVVK-SGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAA 235
Query: 468 CSIHGNIE 475
+ +G+IE
Sbjct: 236 YAQNGHIE 243
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 149/340 (43%), Gaps = 45/340 (13%)
Query: 169 MYGECGDSESARRVFDEMPEPNVVTWN--------------------------------- 195
MY + G + AR +FD MP N V+WN
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 196 --AAVTACFRCGDV--AGARGVFGRMPVRNLTS----WNVMLAGYTKAGELGLARRVFSE 247
+ VTAC R G + G + V G + L S +L Y G + +R+VF E
Sbjct: 61 IASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 248 MPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFG 307
MP ++ VSW++++VG + G ++ ++ + EG+ NE S++ V+S+C G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 308 KILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAM 367
+ + G + KSG +V N+LI GNV A +F MS R +SW SI A A
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQ 238
Query: 368 HGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIE 427
+GH EE+ ++F M + T +LL H + G I + + G + +
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM-GFDSVVC 297
Query: 428 HYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA 467
++ +Y A R +A QMP + + + W +L+ +
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMAS 336
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 216/682 (31%), Positives = 348/682 (51%), Gaps = 49/682 (7%)
Query: 26 RWVSLLSKC---SSLKPTKQIHTHLYVTGLHTHP--LFFGKLLLHCAVTISDALHYALRL 80
R LL C S L+ + IH HL VT + + L++ V + + A +L
Sbjct: 33 RLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR-ARKL 91
Query: 81 FQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGS 140
F P + + +++ F M P+ F K +N G
Sbjct: 92 FDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGR 151
Query: 141 LKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA 200
++ G Q H ++G +H FV TL+ MY C + A RV D++P ++ +++A++
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 201 CFRCG-----------------------------------DVAGARGVFGRMPVR----- 220
CG D+ A V RM VR
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRM-VRFGFNA 270
Query: 221 NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELL 280
+ + ++ Y K G++ A+RVF + ++ +T++ + SF++A F ++
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
+ + PNE + +L++ A+ + G +LHG + KSG+ V NAL++ Y+K G++
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 341 MAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
A+ F M+ R IV+W ++I+G + HG G EAL+ F M +G P+ ITFI +L AC
Sbjct: 391 DARKAFSGMTF-RDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQAC 449
Query: 401 SHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI 460
SH G VEQG F+++ + ++P I+HY C+V L +A A +F+ PI + V
Sbjct: 450 SHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVA 509
Query: 461 WRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTE 520
WRTLL AC + N L + V E PN+SG +VLLSN++A + +W+ V +R M
Sbjct: 510 WRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNN 569
Query: 521 QSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLH 580
+ + K PG S I I + F+A + + + K++E+M +++ GY+P V G H
Sbjct: 570 RGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKP-LGYSPDVAGAFH 628
Query: 581 DIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEI 640
D++EE++ED++S HSEKLA A+G+ K P+ L + KN+R+C DCH+ +KLISK + I
Sbjct: 629 DVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYI 688
Query: 641 IVRDRSRFHLFKDGLCSCRDYW 662
++RD +RFH F DG CSC DYW
Sbjct: 689 VIRDSNRFHHFLDGQCSCCDYW 710
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/452 (43%), Positives = 270/452 (59%), Gaps = 18/452 (3%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N ++ Y G L LAR+VF EMP + VSW++MI L G +D A FRE+ R
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFE 248
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS---VNNALIDTYSKCGNVAMA 342
P+ ++ VLSACA G+ G H F+ + + ++ V N+LI+ Y KCG++ MA
Sbjct: 249 PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMA 308
Query: 343 QLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM--EESGVRPDGITFISLLYAC 400
+ VF+ M R + SW ++I G A HG EEA+ F M + VRP+ +TF+ LL AC
Sbjct: 309 EQVFQGMQ-KRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIAC 367
Query: 401 SHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI 460
+H G V +G + F M Y IEP +EHYGC+VDL RA + +A + + MP+ P+AVI
Sbjct: 368 NHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVI 427
Query: 461 WRTLLGACSIHG-NIELAELVKARLAEMDPNN-------SGDHVLLSNVYAVAGKWKDVV 512
WR+LL AC G ++EL+E + + +N SG +VLLS VYA A +W DV
Sbjct: 428 WRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVG 487
Query: 513 SIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYA 572
+R+ M+E + K PG S IEIN + + F AG+ + T++ + +L+ I RLR+ GY
Sbjct: 488 IVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRS-IGYL 546
Query: 573 P-QVRGVLHDIEEE-EKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMK 630
P + + L D + KE S+ HSE+LA AFG+ LP +RI KNLRVC DCH V K
Sbjct: 547 PDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTK 606
Query: 631 LISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
LISK + EIIVRDR RFH FKDG CSC DYW
Sbjct: 607 LISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 7/258 (2%)
Query: 237 ELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSF-DQAFGFFRELLREG-IRPNEVSLTGV 294
++ A RVF + W+T+I AH+ S ++AF +R++L G P++ + V
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 295 LSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRS 354
L ACA GK +H + K GF VNN LI Y CG + +A+ VF M RS
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP-ERS 216
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQG--CEI 412
+VSW S+I L G + ALQLF EM+ S PDG T S+L AC+ G + G
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHA 275
Query: 413 FSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
F K + + ++++Y + L A E + Q + W ++ + HG
Sbjct: 276 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMA-EQVFQGMQKRDLASWNAMILGFATHG 334
Query: 473 NIELAELVKARLAEMDPN 490
E A R+ + N
Sbjct: 335 RAEEAMNFFDRMVDKREN 352
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 109/279 (39%), Gaps = 23/279 (8%)
Query: 41 KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXX 100
KQ+H + G ++ L+H + L A ++F P +N++I
Sbjct: 171 KQVHCQIVKHGFGGD-VYVNNGLIHLYGSCG-CLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 101 XXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRH---GFD 157
F +M+R + PD ++ L A GSL GT H R
Sbjct: 229 RFGEYDSALQLFREMQR--SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 286
Query: 158 THVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM 217
V V +LI MY +CG A +VF M + ++ +WNA + G A F RM
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 218 PVR------NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV------SWSTMIVGLAH 265
+ N ++ +L G + R+ F +M ++D + ++ +A
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYF-DMMVRDYCIEPALEHYGCIVDLIAR 405
Query: 266 NGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGAS 304
G +A ++ ++P+ V +L AC + GAS
Sbjct: 406 AGYITEAIDM---VMSMPMKPDAVIWRSLLDACCKKGAS 441
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 204/537 (37%), Positives = 302/537 (56%), Gaps = 42/537 (7%)
Query: 166 LISMYGECGDSESARRVFDEMPEPNVVTWNAAVT------------ACFR---------- 203
LI+ Y GD +AR+VFDEMP+ + TWNA + + FR
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 204 ---CGDV----AGARGVFGRMPVRNLT---------SWNVMLAG-YTKAGELGLARRVFS 246
G V AG R V + T N LA Y + G+L V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 247 EMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEF 306
MP+++ V+W+T+I+G A NG + ++ + G RPN+++ VLS+C+
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 307 GKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLA 366
G+ +H K G + +V ++LI YSKCG + A F V W+S+I+
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYG 269
Query: 367 MHGHGEEALQLFHEM-EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPT 425
HG G+EA++LF+ M E++ + + + F++LLYACSHSGL ++G E+F M YG +P
Sbjct: 270 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329
Query: 426 IEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLA 485
++HY C+VDL GRA L +A I MPI + VIW+TLL AC+IH N E+A+ V +
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 389
Query: 486 EMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGE 545
++DPN+S +VLL+NV+A A +W+DV +R++M ++++ K G S E ++ F G+
Sbjct: 390 QIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGD 449
Query: 546 KPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIA 605
+ ++E + L+E+ L ++ + GY P VLHD++EEEKE + +HSEKLA AF +
Sbjct: 450 RSQSKSKEIYSYLKELTLEMKLK-GYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALM 508
Query: 606 KLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
LP+G +RI+KNLRVC DCH K IS EI +RD SRFH F +G CSC DYW
Sbjct: 509 ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 167/344 (48%), Gaps = 18/344 (5%)
Query: 203 RCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
+ GD A V+GRM +N S N+++ GY +AG+L AR+VF EMP + +W+ MI G
Sbjct: 6 KLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG 65
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
L ++ FRE+ G P+E +L V S A + G+ +HG+ K G
Sbjct: 66 LIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELD 125
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
VN++L Y + G + ++V R+M V R++V+W ++I G A +G E L L+ M+
Sbjct: 126 LVVNSSLAHMYMRNGKLQDGEIVIRSMPV-RNLVAWNTLIMGNAQNGCPETVLYLYKMMK 184
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
SG RP+ ITF+++L +CS + QG +I ++ + G + ++ +Y + L
Sbjct: 185 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI-GASSVVAVVSSLISMYSKCGCL 243
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVY 502
A + + + V+W +++ A HG + A + +AE + L+ +Y
Sbjct: 244 GDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 302
Query: 503 AVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEK 546
A + S +K G + ++ YGF G K
Sbjct: 303 ACS---------------HSGLKDKGLELFDMMVEKYGFKPGLK 331
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 358 bits (919), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 201/568 (35%), Positives = 300/568 (52%), Gaps = 43/568 (7%)
Query: 136 ANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN 195
A+ K ++H R GF + T L+ GD AR+VFDEM +P + WN
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN 78
Query: 196 A-----------------------------------AVTACFRCGDVAGARGVFGRMPVR 220
V A + GD + + +
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 221 NLTSWNV----MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
+ ++ Y K GEL A +F M +KD V+W+ + G+ A +F
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYF 198
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
++ + ++ + ++ +LSAC Q G+ E G+ ++ K V NA +D + KC
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
GN A+++F M R++VSW+++I G AM+G EAL LF M+ G+RP+ +TF+ +
Sbjct: 259 GNTEAARVLFEEMK-QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGV 317
Query: 397 LYACSHSGLVEQGCEIFSKM--KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI 454
L ACSH+GLV +G FS M N +EP EHY CMVDL GR+ L +AYEFI +MP+
Sbjct: 318 LSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPV 377
Query: 455 SPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSI 514
P+ IW LLGAC++H ++ L + V L E P+ HVLLSN+YA AGKW V +
Sbjct: 378 EPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKV 437
Query: 515 RRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQ 574
R M + K +S +E ++ F G+K + ++ ++KL EI+ ++R + GY P
Sbjct: 438 RSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIR-KMGYVPD 496
Query: 575 VRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISK 634
V HD+E EEKE S+S HSEKLA AFG+ K G +R++KNLR C DCH K +S
Sbjct: 497 TCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSS 556
Query: 635 FYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
EII+RD++RFH F++G+CSC+++W
Sbjct: 557 LTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 164/395 (41%), Gaps = 47/395 (11%)
Query: 18 AMSNTLEPRWVSLLSKCSSLKPT--KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALH 75
A L + +S L + SS KP K+IH + TG +LL + V I D +
Sbjct: 3 AKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLEN-LVVIGD-MC 60
Query: 76 YALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGV 135
YA ++F P F++NTL + + +MR V PD F++ F +K +
Sbjct: 61 YARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMR-DLGVRPDEFTYPFVVKAI 119
Query: 136 ANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN 195
+ G G LH ++GF V T L+ MY + G+ SA +F+ M ++V WN
Sbjct: 120 SQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWN 179
Query: 196 AAVTACFRCGDVAGARGVFGRMPVR----------------------------------- 220
A + C + G+ A A F +M
Sbjct: 180 AFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE 239
Query: 221 ----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
N+ N L + K G AR +F EM ++ VSWSTMIVG A NG +A F
Sbjct: 240 EIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLF 299
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN---ALIDTY 333
+ EG+RPN V+ GVLSAC+ AG GK M +S + ++D
Sbjct: 300 TTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLL 359
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMH 368
+ G + A + M V W +++ A+H
Sbjct: 360 GRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 311/579 (53%), Gaps = 49/579 (8%)
Query: 25 PRWVSL----------LSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDAL 74
P WVS L KC++L KQ+H + LH KL+ A+++
Sbjct: 10 PSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLI--SALSLCRQT 67
Query: 75 HYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKG 134
+ A+R+F P+ + N+LIR F +M+R +F D+F++ F LK
Sbjct: 68 NLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF-GLFADNFTYPFLLKA 126
Query: 135 VANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECG-------------------- 174
+ L +H + G + ++V LI Y CG
Sbjct: 127 CSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTV 186
Query: 175 -------------DSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRN 221
+ ARR+FDEMP+ ++++WN + RC +++ A +F +MP RN
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERN 246
Query: 222 LTSWNVMLAGYTKAGELGLARRVFSEMPL--KDDVSWSTMIVGLAHNGSFDQAFGFFREL 279
SW+ M+ GY+KAG++ +AR +F +MPL K+ V+W+ +I G A G +A ++
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 280 LREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNV 339
+ G++ + ++ +L+AC ++G G +H +++S + V NAL+D Y+KCGN+
Sbjct: 307 VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Query: 340 AMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA 399
A VF ++ + +VSW +++ GL +HGHG+EA++LF M G+RPD +TFI++L +
Sbjct: 367 KKAFDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
Query: 400 CSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAV 459
C+H+GL+++G + F M+ +Y + P +EHYGC+VDL GR RL +A + + MP+ PN V
Sbjct: 426 CNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVV 485
Query: 460 IWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMT 519
IW LLGAC +H +++A+ V L ++DP + G++ LLSN+YA A W+ V IR M
Sbjct: 486 IWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMK 545
Query: 520 EQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKL 558
+ K G S +E+ ++ F +K + +++ + L
Sbjct: 546 SMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 584
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 184/488 (37%), Positives = 280/488 (57%), Gaps = 7/488 (1%)
Query: 180 RRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP----VRNLTSWNVMLAGYTKA 235
R + + P++ T+N A+ +C R + + G + + + ++ Y+
Sbjct: 96 RMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSAN 155
Query: 236 GELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
G + +A +VF EMP++D VSW+ MI +H G +QA ++ + EG+ + +L +L
Sbjct: 156 GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALL 215
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI 355
S+CA A G +LH V+NALID Y+KCG++ A VF M R +
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDV 274
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
++W S+I G +HGHG EA+ F +M SGVRP+ ITF+ LL CSH GLV++G E F
Sbjct: 275 LTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEI 334
Query: 416 MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIE 475
M + + + P ++HYGCMVDLYGRA +L + E I + V+WRTLLG+C IH N+E
Sbjct: 335 MSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLE 394
Query: 476 LAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEIN 535
L E+ +L +++ N+GD+VL++++Y+ A + S+R+ + + PGWS IEI
Sbjct: 395 LGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIG 454
Query: 536 KVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRG-VLHDIEEEEKEDSVSKH 594
++ FV +K + + + +L E++ R AGY P+ + + + + H
Sbjct: 455 DQVHKFVVDDKMHPESAVIYSELGEVINR-AILAGYKPEDSNRTAPTLSDRCLGSADTSH 513
Query: 595 SEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDG 654
SEKLA A+G+ + G LRI KNLRVC DCH+ K +SK + EIIVRDR RFH F DG
Sbjct: 514 SEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADG 573
Query: 655 LCSCRDYW 662
+CSC DYW
Sbjct: 574 ICSCNDYW 581
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 180/400 (45%), Gaps = 46/400 (11%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHF-PN 86
V +L C+S+K ++IH+H+ + GL HP F LL CAV+++ +L +A LF HF +
Sbjct: 9 VRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSD 68
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P T +N LIR + +M PD F+F FALK S+ +
Sbjct: 69 PSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLE 128
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
+H R GF V T+L+ Y G E A +VFDEMP ++V+WN + G
Sbjct: 129 IHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGL 188
Query: 207 VAGARGVFGRMP-----------VRNLTSW----------------------------NV 227
A ++ RM V L+S N
Sbjct: 189 HNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 248
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
++ Y K G L A VF+ M +D ++W++MI+G +G +A FFR+++ G+RPN
Sbjct: 249 LIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPN 308
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN--ALIDTYSKCGNVAMAQLV 345
++ G+L C+ G + G + H + S F +V + ++D Y + G + + +
Sbjct: 309 AITFLGLLLGCSHQGLVKEG-VEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 367
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGH---GEEALQLFHEME 382
S V W +++ +H + GE A++ ++E
Sbjct: 368 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLE 407
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/635 (33%), Positives = 327/635 (51%), Gaps = 82/635 (12%)
Query: 37 LKPTKQIHTHLYVTGLHTHPLFFGKLL-LHCAVTISDALHYALRLFQHFPNPDTFMYNTL 95
+K +Q+H HL VTG KL+ L C+ + A+ Y LF P
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACS---ARAIAYTHLLFLSVP---------- 68
Query: 96 IRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHG 155
PD F F +K + K LHC A+
Sbjct: 69 --------------------------LPDDFLFNSVIKSTS-----KLRLPLHCVAYY-- 95
Query: 156 FDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFG 215
RR+ P+ T+ + + +C + +GV
Sbjct: 96 ------------------------RRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHC 131
Query: 216 RMPVRN--LTSW--NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQ 271
V L ++ ++ Y+K G++ AR+VF MP K V+W++++ G NG D+
Sbjct: 132 HAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADE 191
Query: 272 AFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALID 331
A F ++ G P+ + +LSACAQ GA G +H ++ G + ALI+
Sbjct: 192 AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 332 TYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES-GVRPDG 390
YS+CG+V A+ VF M ++ +WT++I+ HG+G++A++LF++ME+ G P+
Sbjct: 252 LYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNN 310
Query: 391 ITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFIC 450
+TF+++L AC+H+GLVE+G ++ +M Y + P +EH+ CMVD+ GRA L +AY+FI
Sbjct: 311 VTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH 370
Query: 451 QMPISPNAV---IWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGK 507
Q+ + A +W +LGAC +H N +L + RL ++P+N G HV+LSN+YA++GK
Sbjct: 371 QLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGK 430
Query: 508 WKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRA 567
+V IR M ++ K G+S+IE+ Y F G++ ++ T E + L ++ R +
Sbjct: 431 TDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCK- 489
Query: 568 EAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHT 627
E GYAP V+H +EEEEKE ++ HSEKLA AFG+ K + IVKNLR+C DCH+
Sbjct: 490 EIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHS 548
Query: 628 VMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
K IS +I VRD+ RFH F++G CSC DYW
Sbjct: 549 AFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 355 bits (912), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 317/586 (54%), Gaps = 42/586 (7%)
Query: 117 RHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDS 176
R P++++F ALK G+ +H Q + + VG L+ +Y + GD
Sbjct: 239 RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDM 298
Query: 177 ESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP----VRNLTSWNVMLAG- 231
A +VF+EMP+ +VV W+ + + G A +F RM V N + + +L G
Sbjct: 299 SDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
Query: 232 ----------------------------------YTKAGELGLARRVFSEMPLKDDVSWS 257
Y K ++ A ++F+E+ K++VSW+
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWN 418
Query: 258 TMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS 317
T+IVG + G +AF FRE LR + EV+ + L ACA + + G +HG K+
Sbjct: 419 TVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKT 478
Query: 318 GFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQL 377
+V+N+LID Y+KCG++ AQ VF M + SW ++I+G + HG G +AL++
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTHGLGRQALRI 537
Query: 378 FHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYG 437
M++ +P+G+TF+ +L CS++GL++QG E F M +GIEP +EHY CMV L G
Sbjct: 538 LDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLG 597
Query: 438 RAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVL 497
R+ +L KA + I +P P+ +IWR +L A N E A + +++P + +VL
Sbjct: 598 RSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVL 657
Query: 498 LSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDK 557
+SN+YA A +W +V SIR++M E + K PG S IE ++ F G + + +
Sbjct: 658 VSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGM 717
Query: 558 LREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGK-QLRIV 616
L + ++ AGY P VL D+++EEK+ + HSE+LA A+G+ ++P + ++ I+
Sbjct: 718 LEWLNMK-ATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIM 776
Query: 617 KNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
KNLR+C DCH+ MK+IS Q ++++RD +RFH F G+CSC D+W
Sbjct: 777 KNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 168/369 (45%), Gaps = 50/369 (13%)
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACF---- 202
LH + G+D++ FVG LI+ Y CG +SAR VF+ + ++V W A + +C+
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVW-AGIVSCYVENG 226
Query: 203 ---------RCGDVAG-----------------------ARGVFGRMP----VRNLTSWN 226
C +AG A+GV G++ V +
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 227 VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
+L YT+ G++ A +VF+EMP D V WS MI NG ++A F + + P
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
NE +L+ +L+ CA S G+ LHG + K GF V+NALID Y+KC + A +F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLV 406
+S ++ VSW ++I G G G +A +F E + V +TF S L AC+ +
Sbjct: 407 AELS-SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 407 EQGCEIFS---KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRT 463
+ G ++ K N + + ++D+Y + + A +M + + W
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVS----NSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNA 520
Query: 464 LLGACSIHG 472
L+ S HG
Sbjct: 521 LISGYSTHG 529
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 134/338 (39%), Gaps = 44/338 (13%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A ++F P D ++ +I FI+MR V P+ F+ + L G A
Sbjct: 301 AFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR-EAFVVPNEFTLSSILNGCA 359
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
G G QLH + GFD ++V LI +Y +C ++A ++F E+ N V+WN
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNT 419
Query: 197 AVTACFRCGDVAGARGVFGRMPVRNLTSW------------------------------- 225
+ G+ A +F R +RN S
Sbjct: 420 VIVGYENLGEGGKAFSMF-REALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKT 478
Query: 226 ---------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
N ++ Y K G++ A+ VF+EM D SW+ +I G + +G QA
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL 538
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGK-ILHGFMEKSGFLYISSVNNALIDTYSK 335
+ +PN ++ GVLS C+ AG + G+ + G ++ +
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGR 598
Query: 336 CGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEE 373
G + A + + S++ W ++++ +M+ + EE
Sbjct: 599 SGQLDKAMKLIEGIPYEPSVMIWRAMLSA-SMNQNNEE 635
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 146/323 (45%), Gaps = 18/323 (5%)
Query: 175 DSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGV----FGRMPVRNLTSWNVMLA 230
D ES+ + +P + + A + C + D A+ + + +L + N++L
Sbjct: 36 DLESSDSI---IPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLN 92
Query: 231 GYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
Y KAG A +F EMP +++VS+ T+ G A G + L REG N
Sbjct: 93 AYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHV 148
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS 350
T L +E LH + K G+ + V ALI+ YS CG+V A+ VF +
Sbjct: 149 FTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI- 207
Query: 351 VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGC 410
+ + IV W I++ +G+ E++L+L M +G P+ TF + L A G +
Sbjct: 208 LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAK 267
Query: 411 EIFSK-MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACS 469
+ + +K Y ++P + G ++ LY + + A++ +MP + V W ++
Sbjct: 268 GVHGQILKTCYVLDPRV-GVG-LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIARFC 324
Query: 470 IHG--NIELAELVKARLAEMDPN 490
+G N + ++ R A + PN
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPN 347
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 21/289 (7%)
Query: 31 LSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTF 90
+ KCS L +Q+H + G ++ L+ + + A++LF + +
Sbjct: 360 IGKCSGL--GEQLHGLVVKVGFDL-DIYVSNALIDVYAK-CEKMDTAVKLFAELSSKNEV 415
Query: 91 MYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQ 150
+NT+I F + R+ + +F+ AL A+ S+ G Q+H
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREALRNQVSVTE-VTFSSALGACASLASMDLGVQVHGL 474
Query: 151 AFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGA 210
A + V V +LI MY +CGD + A+ VF+EM +V +WNA ++ G A
Sbjct: 475 AIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQA 534
Query: 211 RGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVS-----WSTMIV 261
+ M R N ++ +L+G + AG + + F M + ++ M+
Sbjct: 535 LRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVR 594
Query: 262 GLAHNGSFDQAFGFFRELLREGI--RPNEVSLTGVLSACAQAGASEFGK 308
L +G D+A L EGI P+ + +LSA EF +
Sbjct: 595 LLGRSGQLDKAMK-----LIEGIPYEPSVMIWRAMLSASMNQNNEEFAR 638
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 355 bits (911), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 204/649 (31%), Positives = 334/649 (51%), Gaps = 75/649 (11%)
Query: 4 MSYFIPTPSSGTEEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLL 63
+S F S E++SN R++S+L C + KQ+H+ G+ +P F KL
Sbjct: 15 LSIFKALLMSTITESISNDYS-RFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLF 73
Query: 64 LHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFP 123
+ + + YA +LF P PD ++N +I+ ++ M + V P
Sbjct: 74 VFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKE-GVTP 132
Query: 124 DSFSFAFALKGVA-NGGSLKP-------------GTQLHCQ------------------A 151
DS +F F L G+ +GG+L G+ L+ Q
Sbjct: 133 DSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGV 192
Query: 152 FRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM------------------------- 186
F VF +IS Y + E + + EM
Sbjct: 193 FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK 252
Query: 187 --------------PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGY 232
EP++ NA V A CG++ A +F M R++ SW ++ GY
Sbjct: 253 DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGY 312
Query: 233 TKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLT 292
+ G L LAR F +MP++D +SW+ MI G G F+++ FRE+ G+ P+E ++
Sbjct: 313 VERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 293 GVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVG 352
VL+ACA G+ E G+ + +++K+ V NALID Y KCG AQ VF +M
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-Q 431
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEI 412
R +WT+++ GLA +G G+EA+++F +M++ ++PD IT++ +L AC+HSG+V+Q +
Sbjct: 432 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF 491
Query: 413 FSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
F+KM++ + IEP++ HYGCMVD+ GRA + +AYE + +MP++PN+++W LLGA +H
Sbjct: 492 FAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN 551
Query: 473 NIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMI 532
+ +AEL ++ E++P+N + LL N+YA +WKD+ +RR + + ++ KTPG+S+I
Sbjct: 552 DEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611
Query: 533 EINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHD 581
E+N + FVAG+K + +EE + KL E+ + A Y P +L +
Sbjct: 612 EVNGFAHEFVAGDKSHLQSEEIYMKLEELA-QESTFAAYLPDTSELLFE 659
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/502 (36%), Positives = 286/502 (56%), Gaps = 6/502 (1%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISD--ALHYALRLFQHFP 85
+S + SL +Q H + TGL H F L+ A T + + YA +
Sbjct: 43 LSFTERAKSLTEIQQAHAFMLKTGLF-HDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGT 145
+P+ F +N++IR F +M P VFPD +SF F LK A + G
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCG 205
Q+H + G T VFV TL+++YG G E AR+V D MP + V+WN+ ++A G
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 206 DVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH 265
V AR +F M RN+ SWN M++GY AG + A+ VF MP++D VSW+ M+ AH
Sbjct: 221 LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAH 280
Query: 266 NGSFDQAFGFFRELLREGI-RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
G +++ F ++L + +P+ +L VLSACA G+ G+ +H +++K G
Sbjct: 281 VGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGF 340
Query: 325 VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES 384
+ AL+D YSKCG + A VFR S R + +W SII+ L++HG G++AL++F EM
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATS-KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE 399
Query: 385 GVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHK 444
G +P+GITFI +L AC+H G+++Q ++F M ++Y +EPTIEHYGCMVDL GR ++ +
Sbjct: 400 GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEE 459
Query: 445 AYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAV 504
A E + ++P +++ +LLGAC G +E AE + RL E++ +S + +SN+YA
Sbjct: 460 AEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYAS 519
Query: 505 AGKWKDVVSIRRTMTEQSMVKT 526
G+W+ V+ RR M + + ++
Sbjct: 520 DGRWEKVIDGRRNMRAERVNRS 541
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 350 bits (899), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/519 (36%), Positives = 293/519 (56%), Gaps = 37/519 (7%)
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCG 205
Q H Q F+ G+ T+ + + ++ Y C S ARR+ + W +++
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRL---------LLWFLSLSP----- 96
Query: 206 DVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH 265
+ + N+++ K GE GLA++V ++ ++W+ MI G
Sbjct: 97 ---------------GVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVR 141
Query: 266 NGSFDQAFGFFRELLR-EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
N +++A + +L I+PN+ S L+ACA+ G K +H M SG +
Sbjct: 142 NVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI 201
Query: 325 VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVS-WTSIIAGLAMHGHGEEALQLFHEMEE 383
+++AL+D Y+KCG++ ++ VF SV R+ VS W ++I G A HG EA+++F EME
Sbjct: 202 LSSALVDVYAKCGDIGTSREVF--YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEA 259
Query: 384 SGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLH 443
V PD ITF+ LL CSH GL+E+G E F M + I+P +EHYG MVDL GRA R+
Sbjct: 260 EHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVK 319
Query: 444 KAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYA 503
+AYE I MPI P+ VIWR+LL + + N EL E+ + + SGD+VLLSN+Y+
Sbjct: 320 EAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYS 376
Query: 504 VAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIML 563
KW+ +R M+++ + K G S +E +++ F AG+ + T+ + L ++
Sbjct: 377 STKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQ 436
Query: 564 RLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCG 623
+ +++ G+ VL D+ EEEKE++++ HSEKLA A+ I K G ++RI KN+R+C
Sbjct: 437 KTKSQ-GFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCS 495
Query: 624 DCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
DCH +K +SK II+RDR RFH F+DGLCSCRDYW
Sbjct: 496 DCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 110/305 (36%), Gaps = 68/305 (22%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A ++ ++ + + +N +I M + P+ FSFA +L A
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
G L +H G + + + + L+ +Y +CGD ++R VF + +V WNA
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 197 AVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSW 256
M+ G+ G A RVFSEM
Sbjct: 237 -------------------------------MITGFATHGLATEAIRVFSEMEA------ 259
Query: 257 STMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEK 316
E + P+ ++ G+L+ C+ G E GK G M +
Sbjct: 260 -------------------------EHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR 294
Query: 317 SGFLYISSVNN--ALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH---G 371
F + + A++D + G V A + +M + +V W S+++ + + G
Sbjct: 295 R-FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELG 353
Query: 372 EEALQ 376
E A+Q
Sbjct: 354 EIAIQ 358
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 348 bits (893), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 305/555 (54%), Gaps = 8/555 (1%)
Query: 25 PRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHF 84
P ++ +CS+ K + + T L+ + + C T L A+
Sbjct: 774 PNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITAC--TSFKRLDLAVSTMTQM 831
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
P+ F+YN L + +++M R +V P S++++ +K A+ + + G
Sbjct: 832 QEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR-DSVSPSSYTYSSLVK--ASSFASRFG 888
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRC 204
L ++ GF HV + TTLI Y G AR+VFDEMPE + + W V+A R
Sbjct: 889 ESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRV 948
Query: 205 GDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
D+ A + +M +N + N ++ GY G L A +F++MP+KD +SW+TMI G +
Sbjct: 949 LDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYS 1008
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
N + +A F +++ EGI P+EV+++ V+SACA G E GK +H + ++GF+
Sbjct: 1009 QNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVY 1068
Query: 325 VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES 384
+ +AL+D YSKCG++ A LVF N+ +++ W SII GLA HG +EAL++F +ME
Sbjct: 1069 IGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEME 1127
Query: 385 GVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHK 444
V+P+ +TF+S+ AC+H+GLV++G I+ M + Y I +EHYG MV L+ +A +++
Sbjct: 1128 SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYE 1187
Query: 445 AYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAV 504
A E I M PNAVIW LL C IH N+ +AE+ +L ++P NSG + LL ++YA
Sbjct: 1188 ALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAE 1247
Query: 505 AGKWKDVVSIRRTMTEQSMVKT-PGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIML 563
+W+DV IR M E + K PG S I I+K + F A +K + ++E L EI
Sbjct: 1248 QNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYD 1307
Query: 564 RLRAEAGYAPQVRGV 578
++ AGY + V
Sbjct: 1308 QM-GLAGYVQETENV 1321
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/584 (33%), Positives = 310/584 (53%), Gaps = 11/584 (1%)
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
PD +N+L+ +M+ + P + S + L+ VA G LK G
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQ-IAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
+H R+ V+V TTLI MY + G AR VFD M N+V WN+ V+
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306
Query: 207 VAGARGVFGRMPVRNLT----SWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWST 258
+ A + RM + +WN + +GY G+ A V +M K + VSW+
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 259 MIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG 318
+ G + NG+F A F ++ EG+ PN +++ +L GK +HGF +
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 319 FLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLF 378
+ + V AL+D Y K G++ A +F + +S+ SW ++ G AM G GEE + F
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIK-NKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 379 HEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGR 438
M E+G+ PD ITF S+L C +SGLV++G + F M++ YGI PTIEH CMVDL GR
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 439 AARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLL 498
+ L +A++FI M + P+A IW L +C IH ++ELAE+ RL ++P+NS +++++
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMM 605
Query: 499 SNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKL 558
N+Y+ +W+DV IR M + WS I+I++ ++ F A K + + + +L
Sbjct: 606 INLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665
Query: 559 REIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKN 618
+++ ++ ++GY P + DI + EKE + H+EKLA +G+ K +R+VKN
Sbjct: 666 YKLVSEMK-KSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKN 724
Query: 619 LRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+C D HTV K +S EI++++ +R H F+DG CSC D W
Sbjct: 725 TNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 179/400 (44%), Gaps = 41/400 (10%)
Query: 73 ALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFAL 132
+L +A +LF P D +N ++ F +M+ DS + L
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDS-TMVKLL 96
Query: 133 KGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVV 192
+ +N G Q+H R G +++V + +LI MY G E +R+
Sbjct: 97 QVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRK----------- 145
Query: 193 TWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPL-- 250
VF M RNL+SWN +L+ YTK G + A + EM +
Sbjct: 146 --------------------VFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 251 --KDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK 308
D V+W++++ G A G A + + G++P+ S++ +L A A+ G + GK
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 309 ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMH 368
+HG++ ++ Y V LID Y K G + A++VF +M ++IV+W S+++GL+
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF-DMMDAKNIVAWNSLVSGLSYA 304
Query: 369 GHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEH 428
++A L ME+ G++PD IT+ SL + G E+ ++ KMK G+ P +
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE-KGVAPNVVS 363
Query: 429 YGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLL 465
+ + + A + +M + PNA TLL
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 112/194 (57%), Gaps = 2/194 (1%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y + LG A ++F EMP +DD++W+ +++ +G++++A FRE+ G + + ++
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
+L C+ G+ +HG++ + G S+ N+LI YS+ G + +++ VF +M
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK- 151
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
R++ SW SI++ G+ ++A+ L EME G++PD +T+ SLL + GL +
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 412 IFSKMKNLYGIEPT 425
+ +M+ + G++P+
Sbjct: 212 VLKRMQ-IAGLKPS 224
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 192/560 (34%), Positives = 301/560 (53%), Gaps = 43/560 (7%)
Query: 11 PSSGTEEAMSNTLE----PRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHC 66
PS+ + SNTL +S+L C ++ IH + T H F L+
Sbjct: 12 PSTFRRDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRT-FHDQDAFVVFELIRV 70
Query: 67 AVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSF 126
T+ D++ YA +F + NP+ ++Y +I + +M H +V PD++
Sbjct: 71 CSTL-DSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMI-HNSVLPDNY 128
Query: 127 SFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM 186
LK LK ++H Q + GF + VG ++ +YG+ G+ +A+++FDE
Sbjct: 129 VITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDE- 183
Query: 187 PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFS 246
MP R+ + VM+ Y++ G + A +F
Sbjct: 184 ------------------------------MPDRDHVAATVMINCYSECGFIKEALELFQ 213
Query: 247 EMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEF 306
++ +KD V W+ MI GL N ++A FRE+ E + NE + VLSAC+ GA E
Sbjct: 214 DVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALEL 273
Query: 307 GKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLA 366
G+ +H F+E + V NALI+ YS+CG++ A+ VFR M + ++S+ ++I+GLA
Sbjct: 274 GRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR-DKDVISYNTMISGLA 332
Query: 367 MHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTI 426
MHG EA+ F +M G RP+ +T ++LL ACSH GL++ G E+F+ MK ++ +EP I
Sbjct: 333 MHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQI 392
Query: 427 EHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAE 486
EHYGC+VDL GR RL +AY FI +PI P+ ++ TLL AC IHGN+EL E + RL E
Sbjct: 393 EHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFE 452
Query: 487 MDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEK 546
+ +SG +VLLSN+YA +GKWK+ IR +M + + K PG S IE++ ++ F+ G+
Sbjct: 453 SENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDI 512
Query: 547 PNEVTEEAHDKLREIMLRLR 566
+ E + +L+E+ LR
Sbjct: 513 AHPHKEAIYQRLQELNRILR 532
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 287/541 (53%), Gaps = 62/541 (11%)
Query: 41 KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXX 100
KQ+H H TG+ +LLL L YA +LF H N TF+YN LI+
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLL------IPNLVYARKLFDHHQNSCTFLYNKLIQAY- 57
Query: 101 XXXXXXXXXHPFIQMRRHPTVF-----------PDSFSFAFALKGVANGGSLKPGTQLHC 149
++ + H ++ P +F F A+ S +P LH
Sbjct: 58 -----------YVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHS 106
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAG 209
Q FR GF++ F TTLI+ Y + G ARRV
Sbjct: 107 QFFRSGFESDSFCCTTLITAYAKLGALCCARRV--------------------------- 139
Query: 210 ARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSF 269
F M R++ WN M+ GY + G++ A +F MP K+ SW+T+I G + NG++
Sbjct: 140 ----FDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNY 195
Query: 270 DQAFGFFRELLRE-GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNA 328
+A F + ++ ++PN +++ VL ACA G E G+ L G+ ++GF V NA
Sbjct: 196 SEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNA 255
Query: 329 LIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRP 388
I+ YSKCG + +A+ +F + R++ SW S+I LA HG +EAL LF +M G +P
Sbjct: 256 TIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKP 315
Query: 389 DGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEF 448
D +TF+ LL AC H G+V +G E+F M+ ++ I P +EHYGCM+DL GR +L +AY+
Sbjct: 316 DAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDL 375
Query: 449 ICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKW 508
I MP+ P+AV+W TLLGACS HGN+E+AE+ L +++P N G+ V++SN+YA KW
Sbjct: 376 IKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKW 435
Query: 509 KDVVSIRRTMTEQSMVKTPGWS-MIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRA 567
V+ +R+ M +++M K G+S +E+ ++ F +K + + E + L EI R++
Sbjct: 436 DGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 495
Query: 568 E 568
E
Sbjct: 496 E 496
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 178/488 (36%), Positives = 267/488 (54%), Gaps = 39/488 (7%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
+F+ P+P T+++N LI+ ++M R PD ++F +K +N G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT 199
++ G+ +H R GFD V VGT+ + YG+C D SAR+VF EMPE N V+W A V
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 200 ACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVS---- 255
A + G++ A+ +F MP RNL SWN ++ G K+G+L A+++F EMP +D +S
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 256 ---------------------------WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNE 288
WS +I+G A NG ++AF F E+ + ++P+E
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 289 VSLTGVLSACAQAGASEF----GKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
+ G++SAC+Q G E LH M K Y+ ALID +KCG++ A
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP---ALIDMNAKCGHMDRAAK 361
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
+F M R +VS+ S++ G+A+HG G EA++LF +M + G+ PD + F +L C S
Sbjct: 362 LFEEMP-QRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
LVE+G F M+ Y I + +HY C+V+L R +L +AYE I MP +A W +L
Sbjct: 421 LVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 480
Query: 465 LGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMV 524
LG CS+HGN E+AE+V L E++P ++G +VLLSN+YA +W DV +R M E +
Sbjct: 481 LGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGIT 540
Query: 525 KTPGWSMI 532
K G S I
Sbjct: 541 KICGRSWI 548
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 311/616 (50%), Gaps = 43/616 (6%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
+F+ P D +N+L+ M + +F AL
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPD 359
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT 199
+ G LH G + +G L+SMYG+ G+ +RRV +MP +VV WNA +
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419
Query: 200 ACFRCGDVAGARGVFGRMPVRNLTS----------------------------------- 224
D A F M V ++S
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 479
Query: 225 -----WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL 279
N ++ Y K G+L ++ +F+ + ++ ++W+ M+ AH+G ++ ++
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
Query: 280 LREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNV 339
G+ ++ S + LSA A+ E G+ LHG K GF + S + NA D YSKCG +
Sbjct: 540 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 599
Query: 340 AMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA 399
+ SV RS+ SW +I+ L HG+ EE FHEM E G++P +TF+SLL A
Sbjct: 600 GEVVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 658
Query: 400 CSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAV 459
CSH GLV++G + + +G+EP IEH C++DL GR+ RL +A FI +MP+ PN +
Sbjct: 659 CSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL 718
Query: 460 IWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMT 519
+WR+LL +C IHGN++ L++++P + +VL SN++A G+W+DV ++R+ M
Sbjct: 719 VWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMG 778
Query: 520 EQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVL 579
+++ K S +++ + F G++ + T E + KL +I +L E+GY L
Sbjct: 779 FKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK-KLIKESGYVADTSQAL 837
Query: 580 HDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVE 639
D +EE+KE ++ HSE+LA A+ + P+G +RI KNLR+C DCH+V K +S+
Sbjct: 838 QDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRR 897
Query: 640 IIVRDRSRFHLFKDGL 655
I++RD+ RFH F+ GL
Sbjct: 898 IVLRDQYRFHHFERGL 913
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 211/492 (42%), Gaps = 52/492 (10%)
Query: 29 SLLSKC----SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHF 84
SL++ C S + Q+H + +GL + ++ +LH + + + ++F+
Sbjct: 46 SLVTACGRSGSMFREGVQVHGFVAKSGLLS-DVYVSTAILHL-YGVYGLVSCSRKVFEEM 103
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPT-VFPDSFSFAFALKGVANGGSLKP 143
P+ + + +L+ + MR +S S + G+ SL
Sbjct: 104 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL-- 161
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
G Q+ Q + G ++ + V +LISM G G+ + A +FD+M E + ++WN+ A +
Sbjct: 162 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 221
Query: 204 CGDVAGARGVFGRM----------PVRNLTS---------W------------------- 225
G + + +F M V L S W
Sbjct: 222 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 281
Query: 226 -NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
N +L Y AG A VF +MP KD +SW++++ ++G A G ++ G
Sbjct: 282 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 341
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
N V+ T L+AC E G+ILHG + SG Y + NAL+ Y K G ++ ++
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
V M R +V+W ++I G A ++AL F M GV + IT +S+L AC G
Sbjct: 402 VLLQMP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 460
Query: 405 -LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRT 463
L+E+G + + + + G E ++ +Y + L + + + + N + W
Sbjct: 461 DLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNA 518
Query: 464 LLGACSIHGNIE 475
+L A + HG+ E
Sbjct: 519 MLAANAHHGHGE 530
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 168/385 (43%), Gaps = 43/385 (11%)
Query: 123 PDSFSFAFALKGVANGGSL-KPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARR 181
P SF A + GS+ + G Q+H + G + V+V T ++ +YG G +R+
Sbjct: 39 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 98
Query: 182 VFDEMPEPNVVTWNA-----------------------------------AVTACFRCGD 206
VF+EMP+ NVV+W + +++C D
Sbjct: 99 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 158
Query: 207 VAGARGVFGRMPVRNLTS----WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
+ R + G++ L S N +++ G + A +F +M +D +SW+++
Sbjct: 159 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 218
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
A NG +++F F + R N +++ +LS ++G+ +HG + K GF +
Sbjct: 219 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 278
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
V N L+ Y+ G A LVF+ M + ++SW S++A G +AL L M
Sbjct: 279 VCVCNTLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
SG + +TF S L AC E+G I + + G+ +V +YG+ +
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 396
Query: 443 HKAYEFICQMPISPNAVIWRTLLGA 467
++ + QMP + V W L+G
Sbjct: 397 SESRRVLLQMP-RRDVVAWNALIGG 420
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 139/294 (47%), Gaps = 10/294 (3%)
Query: 180 RRVFDEMPEPNVVTWNAAVTACFRCGDV--AGARGVFGRMPVRNLTS----WNVMLAGYT 233
R++ D +P+ + VTAC R G + G + V G + L S +L Y
Sbjct: 30 RKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSDVYVSTAILHLYG 88
Query: 234 KAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTG 293
G + +R+VF EMP ++ VSW++++VG + G ++ ++ + EG+ NE S++
Sbjct: 89 VYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL 148
Query: 294 VLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGR 353
V+S+C G+ + G + KSG +V N+LI GNV A +F MS R
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ER 207
Query: 354 SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIF 413
+SW SI A A +GH EE+ ++F M + T +LL H + G I
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 267
Query: 414 SKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA 467
+ + G + + ++ +Y A R +A QMP + + + W +L+ +
Sbjct: 268 GLVVKM-GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMAS 319
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 120/232 (51%), Gaps = 10/232 (4%)
Query: 248 MPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGAS-EF 306
MP++++VSW+TM+ G+ G + + FFR++ GI+P+ + +++AC ++G+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 307 GKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLA 366
G +HGF+ KSG L V+ A++ Y G V+ ++ VF M R++VSWTS++ G +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVGYS 119
Query: 367 MHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQ---GCEIFSKMKNLYGIE 423
G EE + ++ M GV G S+ S GL++ G +I ++ G+E
Sbjct: 120 DKGEPEEVIDIYKGMRGEGV---GCNENSMSLVISSCGLLKDESLGRQIIGQVVK-SGLE 175
Query: 424 PTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIE 475
+ ++ + G + A QM + + W ++ A + +G+IE
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIE 226
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 211/667 (31%), Positives = 331/667 (49%), Gaps = 89/667 (13%)
Query: 17 EAMSNTLEPRWVSL---LSKCSSLK---PTKQIHTHLYVTGLHTHPLFFGKLLLHCAVT- 69
E S+ ++P +L L C+SL +QIH H TG LL A
Sbjct: 115 EMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCK 174
Query: 70 -ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSF 128
IS+A Y + N T + +++ F +RR + ++F
Sbjct: 175 RISEA-EYLFETMEGEKNNVT--WTSMLTGYSQNGFAFKAIECFRDLRREGNQ-SNQYTF 230
Query: 129 AFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE 188
L A+ + + G Q+HC + GF T+++V + LI MY +C + ESAR + + M
Sbjct: 231 PSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEV 290
Query: 189 PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL-------------------------- 222
+VV+WN+ + C R G + A +FGRM R++
Sbjct: 291 DDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASS 350
Query: 223 -------TSW-------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGS 268
T + N ++ Y K G + A +VF M KD +SW+ ++ G HNGS
Sbjct: 351 AHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGS 410
Query: 269 FDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNA 328
+D+A F + GI P+++ VLSA A+ EFG+ +HG KSGF SVNN+
Sbjct: 411 YDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNS 470
Query: 329 LIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRP 388
L+ Y+KCG++ A ++F +M + R +++WT +I G A +G
Sbjct: 471 LVTMYTKCGSLEDANVIFNSMEI-RDLITWTCLIVGYAKNG------------------- 510
Query: 389 DGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEF 448
L+E F M+ +YGI P EHY CM+DL+GR+ K +
Sbjct: 511 ----------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQL 554
Query: 449 ICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKW 508
+ QM + P+A +W+ +L A HGNIE E L E++PNN+ +V LSN+Y+ AG+
Sbjct: 555 LHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQ 614
Query: 509 KDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAE 568
+ ++RR M +++ K PG S +E ++ F++ ++ + E + K+ E+ML ++ E
Sbjct: 615 DEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIK-E 673
Query: 569 AGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTV 628
AGY + LHD+++E KE ++ HSEKLA AFG+ +P G +RI+KNLRVCGDCH+
Sbjct: 674 AGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSA 733
Query: 629 MKLISKF 635
MKL+ F
Sbjct: 734 MKLLVTF 740
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 203 RCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
+ G V AR +F +MP R+ +WN M+ Y+ + L A ++F P+K+ +SW+ +I G
Sbjct: 40 KSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISG 99
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
+GS +AF F E+ +GI+PNE +L VL C G+ +HG K+GF
Sbjct: 100 YCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLD 159
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
+V N L+ Y++C ++ A+ +F M ++ V+WTS++ G + +G +A++ F ++
Sbjct: 160 VNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLR 219
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
G + + TF S+L AC+ G ++ + G + I ++D+Y + +
Sbjct: 220 REGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVK-SGFKTNIYVQSALIDMYAKCREM 278
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD 488
A + M + + V W +++ C G I A + R+ E D
Sbjct: 279 ESARALLEGMEVD-DVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 209/519 (40%), Gaps = 92/519 (17%)
Query: 37 LKPTKQ-IHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTL 95
LKP IH++ T LH++ L G L + S + A ++F P D F +NT+
Sbjct: 13 LKPFGSCIHSYADRTKLHSN-LLLGDL------SKSGRVDEARQMFDKMPERDEFTWNTM 65
Query: 96 IRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGS--------------- 140
I F R +P ++ S+ + G GS
Sbjct: 66 IVAYSNSRRLSDAEKLF---RSNPV--KNTISWNALISGYCKSGSKVEAFNLFWEMQSDG 120
Query: 141 LKP--------------------GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
+KP G Q+H + GFD V V L++MY +C A
Sbjct: 121 IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAE 180
Query: 181 RVFDEMP-EPNVVTWNAAVTA------------CFR--------------------CGDV 207
+F+ M E N VTW + +T CFR C V
Sbjct: 181 YLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASV 240
Query: 208 AGAR-GVFGRMPV------RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMI 260
+ R GV + N+ + ++ Y K E+ AR + M + D VSW++MI
Sbjct: 241 SACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMI 300
Query: 261 VGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGAS-EFGKILHGFMEKSGF 319
VG G +A F + ++ ++ ++ +L+ A + + H + K+G+
Sbjct: 301 VGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGY 360
Query: 320 LYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
VNNAL+D Y+K G + A VF M + + ++SWT+++ G +G +EAL+LF
Sbjct: 361 ATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKLFC 419
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRA 439
M G+ PD I S+L A + L+E G ++ G ++ +V +Y +
Sbjct: 420 NMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIK-SGFPSSLSVNNSLVTMYTKC 478
Query: 440 ARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAE 478
L A M I + + W L+ + +G +E A+
Sbjct: 479 GSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQ 516
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 340 bits (873), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 286/501 (57%), Gaps = 9/501 (1%)
Query: 170 YGECGDSESARRVFDEM----PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----N 221
Y G A V+ +M EP + + A+ AC D+ RG+ ++ R +
Sbjct: 211 YSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVD 270
Query: 222 LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR 281
+NV+L Y ++G AR+VF M ++ V+W+++I L+ + F FR++
Sbjct: 271 QVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE 330
Query: 282 EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
E I + +LT +L AC++ A GK +H + KS + N+L+D Y KCG V
Sbjct: 331 EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEY 390
Query: 342 AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
++ VF M + + + SW ++ A++G+ EE + LF M ESGV PDGITF++LL CS
Sbjct: 391 SRRVFDVM-LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIW 461
+GL E G +F +MK + + P +EHY C+VD+ GRA ++ +A + I MP P+A IW
Sbjct: 450 DTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIW 509
Query: 462 RTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ 521
+LL +C +HGN+ + E+ L ++P+N G++V++SN+YA A W +V IR M ++
Sbjct: 510 GSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQR 569
Query: 522 SMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHD 581
+ K G S +++ + FVAG + + K+ + ++GY+P VLHD
Sbjct: 570 GVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHD 629
Query: 582 IEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEII 641
++EE K + V HSE+LA + + +G +RI KNLRVC DCH+ MK++S+ + I+
Sbjct: 630 VDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIV 689
Query: 642 VRDRSRFHLFKDGLCSCRDYW 662
+RD RFH F DG+CSC+DYW
Sbjct: 690 LRDTKRFHHFVDGICSCKDYW 710
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 47/321 (14%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P +FS + ALK + L+ G +H Q + V L+ +Y E G + AR+V
Sbjct: 234 PGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKV 293
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLT-SW---------------- 225
FD M E NVVTWN+ ++ + V +F +M + SW
Sbjct: 294 FDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAAL 353
Query: 226 ----------------------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGL 263
N ++ Y K GE+ +RRVF M KD SW+ M+
Sbjct: 354 LTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCY 413
Query: 264 AHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS 323
A NG+ ++ F ++ G+ P+ ++ +LS C+ G +E+G L M K+ F
Sbjct: 414 AINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM-KTEFRVSP 472
Query: 324 SVNN--ALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH---GEEALQLF 378
++ + L+D + G + A V M S W S++ +HG+ GE A +
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Query: 379 HEMEESGVRPDGITFISLLYA 399
+E P +S +YA
Sbjct: 533 FVLEPHN--PGNYVMVSNIYA 551
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 228 MLAGYTKAGELGLARRVFSEM---PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
++ ++ L LAR++F ++ L + W+ M +G + NGS A + ++L I
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
P S++ L AC G+ +H + K V N L+ Y + G A+
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
VF MS R++V+W S+I+ L+ E LF +M+E + T ++L ACS
Sbjct: 293 VFDGMS-ERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVA 351
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
+ G EI +++ +P + ++D+YG+ + + M ++ + W +
Sbjct: 352 ALLTGKEIHAQILKSKE-KPDVPLLNSLMDMYGKCGEVEYSRRVFDVM-LTKDLASWNIM 409
Query: 465 LGACSIHGNIE 475
L +I+GNIE
Sbjct: 410 LNCYAINGNIE 420
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 264/431 (61%), Gaps = 3/431 (0%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y K GE+ AR++F EMP ++ V+WS M+ G A G ++A F+E L E + N+ S
Sbjct: 161 YAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSF 220
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
+ V+S CA + E G+ +HG KS F S V ++L+ YSKCG A VF + V
Sbjct: 221 SSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPV 280
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
+++ W +++ A H H ++ ++LF M+ SG++P+ ITF+++L ACSH+GLV++G
Sbjct: 281 -KNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 412 IFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIH 471
F +MK IEPT +HY +VD+ GRA RL +A E I MPI P +W LL +C++H
Sbjct: 340 YFDQMKE-SRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
Query: 472 GNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSM 531
N ELA ++ E+ P +SG H+ LSN YA G+++D R+ + ++ K G S
Sbjct: 399 KNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSW 458
Query: 532 IEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSV 591
+E ++ F AGE+ +E ++E ++KL E+ + +AGY VL +++ +EK ++
Sbjct: 459 VEERNKVHTFAAGERRHEKSKEIYEKLAELGEEME-KAGYIADTSYVLREVDGDEKNQTI 517
Query: 592 SKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLF 651
HSE+LA AFG+ P + +R++KNLRVCGDCH +K +S + IIVRD +RFH F
Sbjct: 518 RYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRF 577
Query: 652 KDGLCSCRDYW 662
+DG CSC DYW
Sbjct: 578 EDGKCSCNDYW 588
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 140/328 (42%), Gaps = 40/328 (12%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD A K A G +HC + + G+D VFVG++L+ MY +CG+ AR++
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKM 173
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWN---------------- 226
FDEMP+ NVVTW+ + + G+ A +F NL +
Sbjct: 174 FDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLL 233
Query: 227 -----------------------VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGL 263
+++ Y+K G A +VF+E+P+K+ W+ M+
Sbjct: 234 ELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAY 293
Query: 264 AHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS 323
A + + F+ + G++PN ++ VL+AC+ AG + G+ M++S
Sbjct: 294 AQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTD 353
Query: 324 SVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE 383
+L+D + G + A V NM + + W +++ +H + E A ++ E
Sbjct: 354 KHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFE 413
Query: 384 SGVRPDGITFISLLYACSHSGLVEQGCE 411
G G+ ISL A + G E +
Sbjct: 414 LGPVSSGM-HISLSNAYAADGRFEDAAK 440
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 206/634 (32%), Positives = 317/634 (50%), Gaps = 53/634 (8%)
Query: 69 TISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSF 128
T S+ L AL LF P D +N++I F +M V S+
Sbjct: 77 TRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV-----SW 131
Query: 129 AFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE 188
+ G G + +L Q DT + +++ Y + G + A ++F +MP
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQMPVK--DTAAW--NSMVHGYLQFGKVDDALKLFKQMPG 187
Query: 189 PNVVTWNAAVTACFRCGDVAGARGVFGRM-----------------PVRNLTSWNV---- 227
NV++W + + A +F M N ++++
Sbjct: 188 KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV 247
Query: 228 ------------------MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSF 269
++ Y +G +R+VF E + W+ ++ G + N
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH 307
Query: 270 DQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNAL 329
+ A F +LR I PN+ + L++C+ G ++GK +HG K G + V N+L
Sbjct: 308 EDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSL 367
Query: 330 IDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPD 389
+ YS GNV A VF + +SIVSW SII G A HG G+ A +F +M PD
Sbjct: 368 VVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426
Query: 390 GITFISLLYACSHSGLVEQGCEIFSKMKN-LYGIEPTIEHYGCMVDLYGRAARLHKAYEF 448
ITF LL ACSH G +E+G ++F M + + I+ I+HY CMVD+ GR +L +A E
Sbjct: 427 EITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEEL 486
Query: 449 ICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKW 508
I +M + PN ++W LL AC +H +++ E A + +D +S +VLLSN+YA AG+W
Sbjct: 487 IERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRW 546
Query: 509 KDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAE 568
+V +R M + ++K PG S + I + F +G++P+ ++KL + +L+ E
Sbjct: 547 SNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYEKLEFLREKLK-E 603
Query: 569 AGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTV 628
GYAP R LHD+E+E+KE+ + HSE+LA AFG+ +G + ++KNLRVC DCHTV
Sbjct: 604 LGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTV 663
Query: 629 MKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+KLIS EI++RD RFH FK+G CSC DYW
Sbjct: 664 IKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 166/374 (44%), Gaps = 65/374 (17%)
Query: 177 ESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAG 236
+ AR VF+++P P+V + +T R + A +F MPVR++ SWN M++G + G
Sbjct: 52 DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG 111
Query: 237 ELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQA------------------------ 272
++ A ++F EMP + VSW+ M+ G +G DQA
Sbjct: 112 DMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 273 FGFFRELLRE-----------------GIRPNEVS------LTGVLSACAQAGASEF--- 306
FG + L+ G+ NE S +L C ++ + F
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 307 ------------GKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRS 354
G +HG + K GFLY V+ +LI Y+ C + ++ VF + V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVF-DEKVHEQ 290
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
+ WT++++G +++ E+AL +F M + + P+ TF S L +CS G ++ G E+
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG 350
Query: 415 KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNI 474
L G+E +V +Y + ++ A ++ + V W +++ C+ HG
Sbjct: 351 VAVKL-GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRG 408
Query: 475 ELAELVKARLAEMD 488
+ A ++ ++ ++
Sbjct: 409 KWAFVIFGQMIRLN 422
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 295/553 (53%), Gaps = 17/553 (3%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
V P++ + A+ + + G+++H A + GF V VG +L+ MY +CG E AR
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 181 RVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYTKAG 236
+VFD + +V TWN+ +T + G A +F RM NL +WN M++GY K G
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG 467
Query: 237 ELGLARRVFSEMP-----LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
+ G A +F M ++ +W+ +I G NG D+A FR++ PN V++
Sbjct: 468 DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTI 527
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
+L ACA ++ + +HG + + I +V NAL DTY+K G++ ++ +F M
Sbjct: 528 LSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET 587
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
+ I++W S+I G +HG AL LF++M+ G+ P+ T S++ A G V++G +
Sbjct: 588 -KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Query: 412 IFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIH 471
+F + N Y I P +EH MV LYGRA RL +A +FI +M I IW + L C IH
Sbjct: 647 VFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIH 706
Query: 472 GNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSM 531
G+I++A L ++P N+ ++S +YA+ K + + + + K G S
Sbjct: 707 GDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSW 766
Query: 532 IEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSV 591
IE+ +++ F G++ T+ + L E M RL + Q G L IEEE +E++
Sbjct: 767 IEVRNLIHTFTTGDQSKLCTDVLY-PLVEKMSRLDNR---SDQYNGELW-IEEEGREETC 821
Query: 592 SKHSEKLAAAFGIAKLPKGKQ--LRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFH 649
HSEK A AFG+ + +RI+KNLR+C DCH K +SK Y +I++ D H
Sbjct: 822 GIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLH 881
Query: 650 LFKDGLCSCRDYW 662
FK+G CSC+DYW
Sbjct: 882 HFKNGDCSCKDYW 894
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 203/430 (47%), Gaps = 13/430 (3%)
Query: 51 GLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXH 110
GL T P F + L + A ++F + F ++ +I
Sbjct: 108 GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAK 167
Query: 111 PFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMY 170
F M + V PD F F L+G AN G ++ G +H + G + + V +++++Y
Sbjct: 168 LFRLMMKDG-VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 171 GECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRN----LTSWN 226
+CG+ + A + F M E +V+ WN+ + A + G A + M L +WN
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 227 VMLAGYTKAGELGLARRVFSEMPL----KDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE 282
+++ GY + G+ A + +M D +W+ MI GL HNG QA FR++
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 283 GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMA 342
G+ PN V++ +SAC+ G +H K GF+ V N+L+D YSKCG + A
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 343 QLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSH 402
+ VF ++ + + +W S+I G G+ +A +LF M+++ +RP+ IT+ +++
Sbjct: 407 RKVFDSVK-NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPIS---PNAV 459
+G + ++F +M+ ++ + ++ Y + + +A E +M S PN+V
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 460 IWRTLLGACS 469
+LL AC+
Sbjct: 526 TILSLLPACA 535
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 142/294 (48%), Gaps = 12/294 (4%)
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
+L+ Y K G + AR+VF M ++ +WS MI + + + FR ++++G+ P+
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR 347
+ +L CA G E GK++H + K G V+N+++ Y+KCG + A FR
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 240
Query: 348 NMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVE 407
M R +++W S++ +G EEA++L EME+ G+ P +T+ L+ + G +
Sbjct: 241 RMR-ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 299
Query: 408 QGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPIS---PNAVIWRTL 464
++ KM+ +GI + + M+ ++A + +M ++ PNAV +
Sbjct: 300 AAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSA 358
Query: 465 LGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSN----VYAVAGKWKDVVSI 514
+ ACS I V + +M D VL+ N +Y+ GK +D +
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKM---GFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHG----FMEKSG 318
L NGS +A L ++G + + +L +C +G+ G+ILH F E
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDV 115
Query: 319 FLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLF 378
F V L+ Y+KCG +A A+ VF +M R++ +W+++I + E +LF
Sbjct: 116 F-----VETKLLSMYAKCGCIADARKVFDSMR-ERNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 379 HEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGR 438
M + GV PD F +L C++ G VE G I S + L G+ + ++ +Y +
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKL-GMSSCLRVSNSILAVYAK 228
Query: 439 AARLHKAYEFICQMPISPNAVIWRT-LLGACSIHGNIELAELVK 481
L A +F +M + + W + LL C + E ELVK
Sbjct: 229 CGELDFATKFFRRMR-ERDVIAWNSVLLAYCQNGKHEEAVELVK 271
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 192/567 (33%), Positives = 294/567 (51%), Gaps = 52/567 (9%)
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
LH + GF + F L+ Y + + +AR++FDEM EPNVV+W + ++ G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 207 VAGARGVFGRM----PV------------------------------------RNLTSWN 226
A +F +M PV RN+ +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 227 VMLAGYTKAGELGLARRVFSEMPL--KDDVSWSTMIVGLAHNGSFDQAFGFFREL--LRE 282
++ Y K ++ ARRVF M ++ VSW++MI A N +A FR
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 283 GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMA 342
R N+ L V+SAC+ G ++GK+ HG + + G+ + V +L+D Y+KCG+++ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 343 QLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSH 402
+ +F + S++S+TS+I A HG GE A++LF EM + P+ +T + +L+ACSH
Sbjct: 291 EKIFLRIRC-HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPN--AVI 460
SGLV +G E S M YG+ P HY C+VD+ GR R+ +AYE + + A++
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 461 WRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTE 520
W LL A +HG +E+ RL + + + ++ LSN YAV+G W+D S+R M
Sbjct: 410 WGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKR 469
Query: 521 QSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRL-----RAEAGYAPQV 575
VK S IE +Y F AG+ + + E L+++ R+ R +
Sbjct: 470 SGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTS 529
Query: 576 RGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKF 635
V D++EE K++ VS H E+LA A+G+ LP G +RI+ NLR+C DCH KLIS+
Sbjct: 530 SSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEI 589
Query: 636 YQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+ EI+VRD +RFH FK+G C+CRDYW
Sbjct: 590 VEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 157/391 (40%), Gaps = 48/391 (12%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNP 87
V LS+ ++ T +HT G + L++ + ++ A +LF P
Sbjct: 36 VHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVI--SYVKLKEINTARKLFDEMCEP 93
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
+ + ++I F +M V P+ ++FA K + + G +
Sbjct: 94 NVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNI 153
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP--EPNVVTWNAAVTAC---- 201
H + G ++ V ++L+ MYG+C D E+ARRVFD M NVV+W + +TA
Sbjct: 154 HARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNA 213
Query: 202 -----------------------FRCGDVAGARGVFGRMP--------------VRNLTS 224
F V A GR+ N
Sbjct: 214 RGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVV 273
Query: 225 WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
+L Y K G L A ++F + +S+++MI+ A +G + A F E++ I
Sbjct: 274 ATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRI 333
Query: 285 RPNEVSLTGVLSACAQAGASEFG-KILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQ 343
PN V+L GVL AC+ +G G + L EK G + S ++D + G V A
Sbjct: 334 NPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAY 393
Query: 344 LVFRNMSVG--RSIVSWTSIIAGLAMHGHGE 372
+ + + VG + + W ++++ +HG E
Sbjct: 394 ELAKTIEVGAEQGALLWGALLSAGRLHGRVE 424
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 295/555 (53%), Gaps = 51/555 (9%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDA-LHYALRLFQHFPN 86
+S L C SL Q+H + + + + + +L+ C L YA +F+
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P +++N++IR + +M R PD F+F + LK + ++ G+
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYS-PDYFTFPYVLKACSGLRDIQFGSC 128
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT------- 199
+H + GF+ +++V T L+ MY CG+ RVF+++P+ NVV W + ++
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 200 ----------------------------ACFRCGDVAGARGVFGRMP-------VRNLTS 224
AC RC D+ + G + ++
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVG 248
Query: 225 WNVMLAG-----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL 279
+NV+LA Y K G+L AR +F MP + VSW+++I G + NG ++A F ++
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 280 LREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNV 339
L GI P++V+ V+ A G S+ G+ +H ++ K+GF+ +++ AL++ Y+K G+
Sbjct: 309 LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDA 368
Query: 340 AMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG-VRPDGITFISLLY 398
A+ F ++ + ++WT +I GLA HGHG EAL +F M+E G PDGIT++ +LY
Sbjct: 369 ESAKKAFEDLE-KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLY 427
Query: 399 ACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNA 458
ACSH GLVE+G F++M++L+G+EPT+EHYGCMVD+ RA R +A + MP+ PN
Sbjct: 428 ACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNV 487
Query: 459 VIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTM 518
IW LL C IH N+EL + +++ +AE + SG +VLLSN+YA AG+W DV IR +M
Sbjct: 488 NIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESM 547
Query: 519 TEQSMVKTPGWSMIE 533
+ + K G S +E
Sbjct: 548 KSKRVDKVLGHSSVE 562
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 261/450 (58%), Gaps = 7/450 (1%)
Query: 114 QMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGEC 173
++ H +S + F + G + ++ C+ + +V + T++I+ Y
Sbjct: 17 ELITHAKCSTESLNQMFLFGMLCLMGVIASANKVFCEMV----EKNVVLWTSMINGYLLN 72
Query: 174 GDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYT 233
D SARR FD PE ++V WN ++ G++ AR +F +MP R++ SWN +L GY
Sbjct: 73 KDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYA 132
Query: 234 KAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREG-IRPNEVSLT 292
G++ RVF +MP ++ SW+ +I G A NG + G F+ ++ EG + PN+ ++T
Sbjct: 133 NIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMT 192
Query: 293 GVLSACAQAGASEFGKILHGFMEKSGFLYIS-SVNNALIDTYSKCGNVAMAQLVFRNMSV 351
VLSACA+ GA +FGK +H + E G+ + +V NALID Y KCG + +A VF+ +
Sbjct: 193 LVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK- 251
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
R ++SW ++I GLA HGHG EAL LFHEM+ SG+ PD +TF+ +L AC H GLVE G
Sbjct: 252 RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLA 311
Query: 412 IFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIH 471
F+ M + I P IEH GC+VDL RA L +A EFI +MP+ +AVIW TLLGA ++
Sbjct: 312 YFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVY 371
Query: 472 GNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSM 531
+++ E+ L +++P N + V+LSN+Y AG++ D ++ M + K G S
Sbjct: 372 KKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSW 431
Query: 532 IEINKVMYGFVAGEKPNEVTEEAHDKLREI 561
IE + + F + + + TEE LRE+
Sbjct: 432 IETDDGLVKFYSSGEKHPRTEELQRILREL 461
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 206/680 (30%), Positives = 335/680 (49%), Gaps = 51/680 (7%)
Query: 25 PRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLL-----LHCAVTISDALHYALR 79
P + ++ SSL+ K+IH + G + L+ L CA A +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD-------AEK 186
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
+F+ P D +N++I F +M + PD FS AL ++
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK-CGFKPDRFSTMSALGACSHVY 245
Query: 140 SLKPGTQLHCQAFRHGFDT-HVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
S K G ++HC A R +T V V T+++ MY + G+ A R+F+ M + N+V WN +
Sbjct: 246 SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305
Query: 199 TACFRCGDVAGARGVFGRMPVRN------LTSWNVMLAG--------------------- 231
R G V A F +M +N +TS N++ A
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHM 365
Query: 232 ---------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE 282
Y + G+L A +F M K+ +SW+++I NG A F+EL
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425
Query: 283 GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMA 342
+ P+ ++ +L A A++ + G+ +H ++ KS + + + N+L+ Y+ CG++ A
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 343 QLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSH 402
+ F ++ + + +VSW SII A+HG G ++ LF EM S V P+ TF SLL ACS
Sbjct: 486 RKCFNHILL-KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSI 544
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWR 462
SG+V++G E F MK YGI+P IEHYGCM+DL GR A F+ +MP P A IW
Sbjct: 545 SGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWG 604
Query: 463 TLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQS 522
+LL A H +I +AE ++ +M+ +N+G +VLL N+YA AG+W+DV I+ M +
Sbjct: 605 SLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKG 664
Query: 523 MVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDI 582
+ +T S +E + F G++ + T + ++ L + + E Y V + +
Sbjct: 665 ISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPET 724
Query: 583 EEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIV 642
+ + +S +HS +LA FG+ G+++ + N R+C CH ++ S+ + EI+V
Sbjct: 725 LVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVV 784
Query: 643 RDRSRFHLFKDGLCSCRDYW 662
D FH F +G CSC +YW
Sbjct: 785 GDSKIFHHFSNGRCSCGNYW 804
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 227/470 (48%), Gaps = 59/470 (12%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
AL+LF D F++N +I+ + +M V D+F++ F +K VA
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV-FAGVKADTFTYPFVIKSVA 141
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
SL+ G ++H + GF + V+V +LIS+Y + G + A +VF+EMPE ++V+WN+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 197 AVTACFRCGDVAGARGVFGRM------PVR-----------------------------N 221
++ GD + +F M P R
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 222 LTSWNVM-----LAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
+ + +VM L Y+K GE+ A R+F+ M ++ V+W+ MI A NG AF F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 277 RELLRE-GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSK 335
+++ + G++P+ ++ +L A A G+ +HG+ + GFL + ALID Y +
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 336 CGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFIS 395
CG + A+++F M+ ++++SW SIIA +G AL+LF E+ +S + PD T S
Sbjct: 378 CGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Query: 396 LLYACSHSGLVEQGCEIFSKM-KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI 454
+L A + S + +G EI + + K+ Y I +V +Y L A + + +
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTII--LNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 455 SPNAVIWRTLLGACSIHGNIEL-----AELVKARLAEMDPNNSGDHVLLS 499
+ V W +++ A ++HG + +E++ +R+ +PN S LL+
Sbjct: 495 -KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV---NPNKSTFASLLA 540
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 12/265 (4%)
Query: 229 LAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNE 288
L G+ + + A ++F EM D W+ MI G G + +A F+ ++ G++ +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 289 VSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRN 348
+ V+ + A + E GK +H + K GF+ V N+LI Y K G A+ VF
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 349 MSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQ 408
M R IVSW S+I+G G G +L LF EM + G +PD + +S L ACSH +
Sbjct: 191 MP-ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM 249
Query: 409 GCEIFSKMKNLYGIEPTIEHYGCMV-----DLYGRAARLHKAYEFICQMPISPNAVIWRT 463
G EI + + + IE MV D+Y + + A E I I N V W
Sbjct: 250 GKEI-----HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA-ERIFNGMIQRNIVAWNV 303
Query: 464 LLGACSIHGNIELAELVKARLAEMD 488
++G + +G + A L +++E +
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQN 328
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/561 (34%), Positives = 290/561 (51%), Gaps = 44/561 (7%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A +LF+ DT +N +I F +M V PD+ +F+ L V+
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI-SSGVLPDAITFSSLLPSVS 351
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
+L+ Q+HC RH +F+ + LI Y +C A+ +F + +VV + A
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 197 AVTACFRCGDVAGARGVF----------------GRMPV----------RNLTSWNV--- 227
++ G + +F +PV R L + +
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 228 ----------MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFR 277
++ Y K G + LA +F + +D VSW++MI A + + A FR
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG 337
++ GI + VS++ LSACA + FGK +HGFM K + LID Y+KCG
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591
Query: 338 NVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM-EESGVRPDGITFISL 396
N+ A VF+ M ++IVSW SIIA HG +++L LFHEM E+SG+RPD ITF+ +
Sbjct: 592 NLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISP 456
+ +C H G V++G F M YGI+P EHY C+VDL+GRA RL +AYE + MP P
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 710
Query: 457 NAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRR 516
+A +W TLLGAC +H N+ELAE+ ++L ++DP+NSG +VL+SN +A A +W+ V +R
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 770
Query: 517 TMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVR 576
M E+ + K PG+S IEINK + FV+G+ + + + L ++ LR E GY PQ
Sbjct: 771 LMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLE-GYIPQPY 829
Query: 577 GVLHDIEEEEKEDSVSKHSEK 597
LH E K VS+ EK
Sbjct: 830 LPLHP-ESSRKVYPVSRFIEK 849
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/521 (21%), Positives = 213/521 (40%), Gaps = 78/521 (14%)
Query: 11 PSSGTEEAMSNTLEPRWVSLLSKCSS---LKPTKQIHTHLYVTGL----HTHPLFFGKLL 63
P + + T+ R LL CS+ L+ KQ+H L V + +T G
Sbjct: 22 PLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYA 81
Query: 64 LHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFP 123
+ + + + Y L L + P +N++I + +M V P
Sbjct: 82 MCGSFSDCGKMFYRLDLRRSSIRP----WNSIISSFVRNGLLNQALAFYFKMLCF-GVSP 136
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D +F +K + K L G D + FV ++LI Y E G + ++F
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 184 DEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS------------------- 224
D + + + V WN + +CG + F M + ++
Sbjct: 197 DRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID 256
Query: 225 --------------------WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
N +L+ Y+K G A ++F M D V+W+ MI G
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
+G +++ FF E++ G+ P+ ++ + +L + ++ E+ K +H ++ +
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIF 376
Query: 325 VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES 384
+ +ALID Y KC V+MAQ +F + +V +T++I+G +G ++L++F + +
Sbjct: 377 LTSALIDAYFKCRGVSMAQNIFSQCN-SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV 435
Query: 385 GVRPDGITFISLLYACS-----------HSGLVEQGCEIFSKMKNLYGIEPTIEHYGC-M 432
+ P+ IT +S+L H ++++G F N+ GC +
Sbjct: 436 KISPNEITLVSILPVIGILLALKLGRELHGFIIKKG---FDNRCNI----------GCAV 482
Query: 433 VDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGN 473
+D+Y + R++ AYE ++ + V W +++ C+ N
Sbjct: 483 IDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDN 522
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 36 SLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDA----LHYALRLFQHFPNPDTFM 91
+LK +++H + G F + + CAV A ++ A +F+ D
Sbjct: 456 ALKLGRELHGFIIKKG------FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS 509
Query: 92 YNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQA 151
+N++I F QM + D S + AL AN S G +H
Sbjct: 510 WNSMITRCAQSDNPSAAIDIFRQMGVSGICY-DCVSISAALSACANLPSESFGKAIHGFM 568
Query: 152 FRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGAR 211
+H + V+ +TLI MY +CG+ ++A VF M E N+V+WN+ + AC G + +
Sbjct: 569 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSL 628
Query: 212 GVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQ 271
+F M K+G D +++ +I H G D+
Sbjct: 629 CLFHEM--------------VEKSG------------IRPDQITFLEIISSCCHVGDVDE 662
Query: 272 AFGFFRELLRE-GIRPNEVSLTGVLSACAQAG 302
FFR + + GI+P + V+ +AG
Sbjct: 663 GVRFFRSMTEDYGIQPQQEHYACVVDLFGRAG 694
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 104/250 (41%), Gaps = 10/250 (4%)
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDV--SWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
+L Y G ++F + L+ W+++I NG +QA F+ ++L G+
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
P+ + ++ AC + L + G V ++LI Y + G + + +
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL 195
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
F + + + V W ++ G A G + ++ F M + P+ +TF +L C+ L
Sbjct: 196 FDRV-LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 406 VEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL 465
++ G ++ + + G++ ++ +Y + R A + +M + V W
Sbjct: 255 IDLGVQLHG-LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF-RMMSRADTVTWN--- 309
Query: 466 GACSIHGNIE 475
C I G ++
Sbjct: 310 --CMISGYVQ 317
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/564 (34%), Positives = 295/564 (52%), Gaps = 45/564 (7%)
Query: 7 FIPTPSSGTEEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGL-HTHPLFFGKLLLH 65
++ PSS E + N +++SK L KQ+ + + V+GL H+H L F KLL
Sbjct: 10 YLHAPSSHMAEQLLNQFIS---AVISKSRHLNHLKQVQSFMIVSGLSHSHFLCF-KLLRF 65
Query: 66 CAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXX-XXXXXXHPFIQMRRHPTV-FP 123
C + + + L YA +F F P+T +Y ++ F ++ + +V P
Sbjct: 66 CTLRLCN-LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRP 124
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSES-ARRV 182
+ F + LK S +H F+ GF +V V T L+ Y + AR++
Sbjct: 125 NHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQL 184
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLAR 242
FDEM E RN+ SW ML+GY ++G++ A
Sbjct: 185 FDEMSE-------------------------------RNVVSWTAMLSGYARSGDISNAV 213
Query: 243 RVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE-GIRPNEVSLTGVLSACAQA 301
+F +MP +D SW+ ++ NG F +A FR ++ E IRPNEV++ VLSACAQ
Sbjct: 214 ALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQT 273
Query: 302 GASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSI 361
G + K +H F + V+N+L+D Y KCGN+ A VF+ M+ +S+ +W S+
Sbjct: 274 GTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFK-MASKKSLTAWNSM 332
Query: 362 IAGLAMHGHGEEALQLFHEMEE---SGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
I A+HG EEA+ +F EM + + ++PD ITFI LL AC+H GLV +G F M N
Sbjct: 333 INCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTN 392
Query: 419 LYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAE 478
+GIEP IEHYGC++DL GRA R +A E + M + + IW +LL AC IHG+++LAE
Sbjct: 393 RFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAE 452
Query: 479 LVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVM 538
+ L ++PNN G +++N+Y G W++ R+ + Q+ K PGWS IEI+ +
Sbjct: 453 VAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEV 512
Query: 539 YGFVAGEKPNEVTEEAHDKLREIM 562
+ F + +K + TEE + L ++
Sbjct: 513 HQFYSLDKSHPETEEIYMILDSLI 536
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 298/605 (49%), Gaps = 77/605 (12%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNP 87
+SLL KC L KQI + + GL P +L+ CA++ S L Y++++ + NP
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTV--FPDSFSFAFALKGVAN-------- 137
+ F +N IR + QM RH PD F++ K A+
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 138 ---GGSLKPGTQLHCQAFRHGFDTHVFVG----------------------TTLISMYGE 172
G LK +L + H H+F LI+ Y +
Sbjct: 177 MILGHVLK--LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 173 CGDSESARRVFDEMP----EPNVVTWNAAVTACF-------------------------- 202
G++E A V+ M +P+ VT V++C
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 203 ---------RCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDD 253
+CGD+ AR +F + R + SW M++GY + G L ++R++F +M KD
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
V W+ MI G A F+E+ +P+E+++ LSAC+Q GA + G +H +
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEE 373
+EK ++ +L+D Y+KCGN++ A VF + R+ +++T+II GLA+HG
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT-RNSLTYTAIIGGLALHGDAST 473
Query: 374 ALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMV 433
A+ F+EM ++G+ PD ITFI LL AC H G+++ G + FS+MK+ + + P ++HY MV
Sbjct: 474 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV 533
Query: 434 DLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSG 493
DL GRA L +A + MP+ +A +W LL C +HGN+EL E +L E+DP++SG
Sbjct: 534 DLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSG 593
Query: 494 DHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEE 553
+VLL +Y A W+D RR M E+ + K PG S IE+N ++ F+ +K +E+
Sbjct: 594 IYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEK 653
Query: 554 AHDKL 558
+D+L
Sbjct: 654 IYDRL 658
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 282/547 (51%), Gaps = 35/547 (6%)
Query: 30 LLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDT 89
L +C S+ +IHT L GL F + L A++ S + YA + +P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN 73
Query: 90 FMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHC 149
+ +N +IR +IQM R + PD ++ F +K + + K G LHC
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFG-LLPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAG 209
+ G + +F+ TLI MYG FR D A
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGS-----------------------------FR--DQAS 161
Query: 210 ARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSF 269
AR +F MP +NL +WN +L Y K+G++ AR VF EM +D V+WS+MI G G +
Sbjct: 162 ARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEY 221
Query: 270 DQAFGFFRELLREGI-RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNA 328
++A F +++R G + NEV++ V+ ACA GA GK +H ++ + +
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 329 LIDTYSKCGNVAMAQLVFRNMSVGRS-IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVR 387
LID Y+KCG++ A VF SV + + W +II GLA HG E+LQLFH+M ES +
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 388 PDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYE 447
PD ITF+ LL ACSH GLV++ F +K G EP EHY CMVD+ RA + A++
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSLKE-SGAEPKSEHYACMVDVLSRAGLVKDAHD 400
Query: 448 FICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGK 507
FI +MPI P + LL C HGN+ELAE V +L E+ P+N G +V L+NVYA+ +
Sbjct: 401 FISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQ 460
Query: 508 WKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRA 567
++ S+R M ++ + K G S+++++ + F+A +K + +++ + L+ +
Sbjct: 461 FRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQLTGAWMNL 520
Query: 568 EAGYAPQ 574
+ Y Q
Sbjct: 521 DVDYDDQ 527
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/626 (31%), Positives = 297/626 (47%), Gaps = 85/626 (13%)
Query: 23 LEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQ 82
++ R + SKC SL+ +Q+ + ++T L T L A LF+
Sbjct: 57 IQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL------TKLGFLDEADSLFR 110
Query: 83 HFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLK 142
P D +N+++ F M + V + +SFA L + +
Sbjct: 111 SMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVL-NEYSFASVLSACSGLNDMN 169
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISM-------------YGECGDSE------------ 177
G Q+H + F + V++G+ L+ M + E GD
Sbjct: 170 KGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFE 229
Query: 178 ------SARRVFDEM----PEPNVVTWNAAVTACF------------------------- 202
A VF M EP+ VT + ++AC
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 203 -----------RCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLK 251
+C + AR +F MP+RN+ + M++GY A AR +F++M +
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 252 DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILH 311
+ VSW+ +I G NG ++A F L RE + P S +L ACA G H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 312 GFMEKSGFLYISS------VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGL 365
+ K GF + S V N+LID Y KCG V LVFR M + R VSW ++I G
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGF 468
Query: 366 AMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPT 425
A +G+G EAL+LF EM ESG +PD IT I +L AC H+G VE+G FS M +G+ P
Sbjct: 469 AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL 528
Query: 426 IEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLA 485
+HY CMVDL GRA L +A I +MP+ P++VIW +LL AC +H NI L + V +L
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLL 588
Query: 486 EMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGE 545
E++P+NSG +VLLSN+YA GKW+DV+++R++M ++ + K PG S I+I + F+ +
Sbjct: 589 EVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKD 648
Query: 546 KPNEVTEEAHDKLREIMLRLRAEAGY 571
K + ++ H L ++ +R E +
Sbjct: 649 KSHPRKKQIHSLLDILIAEMRPEQDH 674
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 178/376 (47%), Gaps = 34/376 (9%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKG-VANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMY 170
F+++ + F DS FA L + + S +H + GF +F+ LI Y
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY 65
Query: 171 GECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLA 230
+CG E R+VFD+MP+ N+ TWN+ VT + G + A +F MP R+ +WN M++
Sbjct: 66 SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVS 125
Query: 231 GYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
G+ A + ++A +F + +EG NE S
Sbjct: 126 GF-------------------------------AQHDRCEEALCYFAMMHKEGFVLNEYS 154
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS 350
VLSAC+ G +H + KS FL + +AL+D YSKCGNV AQ VF M
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 351 VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGC 410
R++VSW S+I +G EAL +F M ES V PD +T S++ AC+ ++ G
Sbjct: 215 -DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Query: 411 EIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSI 470
E+ ++ + I VD+Y + +R+ +A MPI N + +++ ++
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISGYAM 332
Query: 471 HGNIELAELVKARLAE 486
+ + A L+ ++AE
Sbjct: 333 AASTKAARLMFTKMAE 348
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 288/554 (51%), Gaps = 43/554 (7%)
Query: 51 GLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPN-PDTFMYNTLIRXXXXXXXXXXXX 109
+ T+ F K L+ A + + YA +LF P D+F+ N++I+
Sbjct: 5 AIETNVQIFTKFLVISASAV--GIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSF 62
Query: 110 HPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISM 169
+ +R+ PD+F+F K + + G QLH Q +R GF ++V T ++ M
Sbjct: 63 ALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDM 122
Query: 170 YGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP-VRNLTSWNVM 228
Y + G AR FDEMP + V+W A ++ RCG++ A +F +MP V+++ +N M
Sbjct: 123 YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAM 182
Query: 229 LAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF-----RELL--- 280
+ G+ K+G++ ARR+F EM K ++W+TMI G + D A F R L+
Sbjct: 183 MDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWN 242
Query: 281 ------------REGIR------------PNEVSLTGVLSACAQAGASEFGKILHGFMEK 316
+EGIR P++V++ VL A + GA G+ H F+++
Sbjct: 243 TMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR 302
Query: 317 SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQ 376
V A++D YSKCG + A+ +F M + + SW ++I G A++G+ AL
Sbjct: 303 KKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGNARAALD 361
Query: 377 LFHEM--EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVD 434
LF M EE +PD IT ++++ AC+H GLVE+G + F M+ + G+ IEHYGCMVD
Sbjct: 362 LFVTMMIEE---KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVD 417
Query: 435 LYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGD 494
L GRA L +A + I MP PN +I + L AC + +IE AE + + E++P N G+
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 495 HVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEA 554
+VLL N+YA +W D ++ M + K G S+IEIN ++ F++G+ +
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSI 537
Query: 555 HDKLREIMLRLRAE 568
H L ++++ + E
Sbjct: 538 HLVLGDLLMHMNEE 551
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 308 bits (789), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 209/645 (32%), Positives = 320/645 (49%), Gaps = 71/645 (11%)
Query: 76 YALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGV 135
YA ++F P + + LI F M H FP+ F+ L V
Sbjct: 114 YARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH--CFPNEFT----LSSV 167
Query: 136 ANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARR---VFDEMPEPNVV 192
+PG Q+H A + G ++V +ISMYG C D +A VF+ + N+V
Sbjct: 168 LTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLV 227
Query: 193 TWNAAVTACFRCGDVAG-ARGVFGRMPVRNL-----TSWNVMLAGY-------------- 232
TWN+ + A F+C ++ A GVF RM + T N+ + Y
Sbjct: 228 TWNSMIAA-FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCC 286
Query: 233 -------TKAG-----ELGLAR-RVFSEM---------------PLKDDVSWSTMIVGLA 264
K+G E+ A +V+SEM +D V+W+ +I A
Sbjct: 287 LQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA 346
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
++A F +L +E + P+ + + VL ACA + +H + K GFL +
Sbjct: 347 VYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV 405
Query: 325 VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES 384
+NN+LI Y+KCG++ + VF +M R +VSW S++ ++HG + L +F +M+
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMD-SRDVVSWNSMLKAYSLHGQVDSILPVFQKMD-- 462
Query: 385 GVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHK 444
+ PD TFI+LL ACSH+G VE+G IF M P + HY C++D+ RA R +
Sbjct: 463 -INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAE 521
Query: 445 AYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEM-DPNNSGDHVLLSNVYA 503
A E I QMP+ P+AV+W LLG+C HGN L +L +L E+ +P NS ++ +SN+Y
Sbjct: 522 AEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYN 581
Query: 504 VAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIML 563
G + + + M + K P S EI ++ F +G + E + +L+ ++
Sbjct: 582 AEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLIS 641
Query: 564 RLRAEAGYAPQVRGV-LHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQ-----LRIVK 617
L+ E GY P++R +EE++ED++ HSEKLA AF + + K ++I+K
Sbjct: 642 WLK-EMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMK 700
Query: 618 NLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
N R+C DCH MKL SK EI++RD +RFH FKD CSC DYW
Sbjct: 701 NTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 190/450 (42%), Gaps = 53/450 (11%)
Query: 119 PTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRH--GFDTHVFVGTTLISMYGECGDS 176
P ++A + A +L G LH H + +V + LI+MY +CG+
Sbjct: 53 PVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNI 112
Query: 177 ESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV----RNLTSWNVMLAGY 232
AR+VFD MPE NVV+W A +T + G+ +F M T +V+ +
Sbjct: 113 LYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCR 172
Query: 233 TKAG--------ELGL-------------------------ARRVFSEMPLKDDVSWSTM 259
+ G +LGL A VF + K+ V+W++M
Sbjct: 173 YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSM 232
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG---ASEFGKI---LHGF 313
I +A G F + +G+ + +L + S+ ++ +E K LH
Sbjct: 233 IAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSL 292
Query: 314 MEKSGFLYISSVNNALIDTYSK-CGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGE 372
KSG + + V ALI YS+ + +F MS R IV+W II A++ E
Sbjct: 293 TVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PE 351
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCM 432
A+ LF ++ + + PD TF S+L AC+ I +++ + T+ + +
Sbjct: 352 RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLN-NSL 410
Query: 433 VDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPN-N 491
+ Y + L M S + V W ++L A S+HG + + + +MD N +
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMD-SRDVVSWNSMLKAYSLHGQV---DSILPVFQKMDINPD 466
Query: 492 SGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ 521
S + L + + AG+ ++ + I R+M E+
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRSMFEK 496
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 154/403 (38%), Gaps = 79/403 (19%)
Query: 29 SLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDAL-------------H 75
S+L+ C +P KQ+H GL KL LHC++ +++A+ +
Sbjct: 166 SVLTSCR-YEPGKQVH------GLAL------KLGLHCSIYVANAVISMYGRCHDGAAAY 212
Query: 76 YALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGV 135
A +F+ + +N++I F++M F D + +
Sbjct: 213 EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGF-DRATLLNICSSL 271
Query: 136 ANGGSLKPGT------QLHCQAFRHGFDTHVFVGTTLISMYGE-CGDSESARRVFDEMPE 188
L P QLH + G T V T LI +Y E D ++F EM
Sbjct: 272 YKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSH 331
Query: 189 -PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLT-SW--------------------- 225
++V WN +TA F D A +FG++ L+ W
Sbjct: 332 CRDIVAWNGIITA-FAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALS 390
Query: 226 -----------------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGS 268
N ++ Y K G L L RVF +M +D VSW++M+ + +G
Sbjct: 391 IHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQ 450
Query: 269 FDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFG-KILHGFMEKSGFLYISSVNN 327
D F+++ I P+ + +LSAC+ AG E G +I EK L +
Sbjct: 451 VDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYA 507
Query: 328 ALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH 370
+ID S+ A A+ V + M + V W +++ HG+
Sbjct: 508 CVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGN 550
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 308 bits (789), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 266/513 (51%), Gaps = 50/513 (9%)
Query: 30 LLSKCSSLKPTKQIHTHLYVTG-----LHTHPLFFGKLLLHCAVTIS-----DALHYALR 79
LL C +LK Q H +G + +F L +++ S + + YA
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXX-XXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA-- 136
+F+ NP TF +NT+IR F++MRR +V PD +F F K A
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRR-SVPPDFHTFPFVFKACAAK 128
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
G L LHCQA R G + +F TLI +Y +SA ++FDE P+ +VVT
Sbjct: 129 KNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVT--- 185
Query: 197 AVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSW 256
+NV++ G KA E+ AR +F MPL+D VSW
Sbjct: 186 ----------------------------YNVLIDGLVKAREIVRARELFDSMPLRDLVSW 217
Query: 257 STMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEK 316
+++I G A +A F E++ G++P+ V++ LSACAQ+G + GK +H + ++
Sbjct: 218 NSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR 277
Query: 317 SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQ 376
S + L+D Y+KCG + A +F + +++ +W ++I GLAMHG+GE +
Sbjct: 278 KRLFIDSFLATGLVDFYAKCGFIDTAMEIFE-LCSDKTLFTWNAMITGLAMHGNGELTVD 336
Query: 377 LFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLY 436
F +M SG++PDG+TFIS+L CSHSGLV++ +F +M++LY + ++HYGCM DL
Sbjct: 337 YFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLL 396
Query: 437 GRAARLHKAYEFICQMPIS----PNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNS 492
GRA + +A E I QMP + W LLG C IHGNIE+AE R+ + P +
Sbjct: 397 GRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDG 456
Query: 493 GDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVK 525
G + ++ +YA A +W++VV +R + VK
Sbjct: 457 GVYKVMVEMYANAERWEEVVKVREIIDRDKKVK 489
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/463 (37%), Positives = 250/463 (53%), Gaps = 36/463 (7%)
Query: 121 VFPDSFSFAFALKGVAN--GGSLKPGTQLHCQAFRHGFD-THVFVGTTLISMYGECGDSE 177
V P+ +F L G + GS G LH A + G D HV VGT +I MY + G +
Sbjct: 67 VEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFK 126
Query: 178 SARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGE 237
AR VFD M + N V +WN M+ GY ++G+
Sbjct: 127 KARLVFDYMEDKNSV-------------------------------TWNTMIDGYMRSGQ 155
Query: 238 LGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
+ A ++F +MP +D +SW+ MI G G ++A +FRE+ G++P+ V++ L+A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVS 357
C GA FG +H ++ F V+N+LID Y +CG V A+ VF NM R++VS
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME-KRTVVS 274
Query: 358 WTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
W S+I G A +G+ E+L F +M+E G +PD +TF L ACSH GLVE+G F MK
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 418 NLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG-NIEL 476
Y I P IEHYGC+VDLY RA RL A + + MP+ PN V+ +LL ACS HG NI L
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVL 394
Query: 477 AELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINK 536
AE + L +++ + ++V+LSN+YA GKW+ +RR M + K PG+S IEI+
Sbjct: 395 AERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDD 454
Query: 537 VMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVL 579
M+ F+AG+ + T + L I LR + + G L
Sbjct: 455 CMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVETLAGDL 497
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 112/285 (39%), Gaps = 68/285 (23%)
Query: 223 TSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE 282
SW + T+ G L A + FS+M L
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLA------------------------------- 65
Query: 283 GIRPNEVSLTGVLSACAQ--AGASEFGKILHGFMEKSG---------------------- 318
G+ PN ++ +LS C +G+ G +LHG+ K G
Sbjct: 66 GVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRF 125
Query: 319 ------FLYISSVN----NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMH 368
F Y+ N N +ID Y + G V A +F M R ++SWT++I G
Sbjct: 126 KKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMP-ERDLISWTAMINGFVKK 184
Query: 369 GHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEH 428
G+ EEAL F EM+ SGV+PD + I+ L AC++ G + G + + + + +
Sbjct: 185 GYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLS-QDFKNNVRV 243
Query: 429 YGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGN 473
++DLY R + A + M V W +++ + +GN
Sbjct: 244 SNSLIDLYCRCGCVEFARQVFYNME-KRTVVSWNSVIVGFAANGN 287
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 338 NVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLL 397
N A ++ N S + VSWTS I L +G EA + F +M +GV P+ ITFI+LL
Sbjct: 19 NHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALL 78
Query: 398 YACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMV-----DLYGRAARLHKAYEFICQM 452
C G G E + + Y + ++ MV +Y + R KA M
Sbjct: 79 SGC---GDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYM 135
Query: 453 PISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD 488
N+V W T++ G ++ A + ++ E D
Sbjct: 136 E-DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERD 170
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/583 (31%), Positives = 284/583 (48%), Gaps = 55/583 (9%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P S + LK + N +L G Q+H R G ++ + T +++MY +CG A+RV
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWN-----VMLAGYTKAGE 237
FD+M V + + G A +F + V W+ V+L E
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDL-VTEGVEWDSFVFSVVLKACASLEE 300
Query: 238 LGLAR-----------------------------------RVFSEMPLKDDVSWSTMIVG 262
L L + R F E+ +DVSWS +I G
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 263 LAHNGSFDQAFGFFRELLREGIRP-NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLY 321
F++A F+ L + N + T + AC+ G +H K +
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
+ALI YSKCG + A VF +M IV+WT+ I+G A +G+ EAL+LF +M
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR 441
G++P+ +TFI++L ACSH+GLVEQG M Y + PTI+HY CM+D+Y R+
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 442 LHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNV 501
L +A +F+ MP P+A+ W+ L C H N+EL E+ L ++DP ++ +VL N+
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNL 599
Query: 502 YAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREI 561
Y AGKW++ + + M E+ + K S I+ ++ F+ G+K + T+E ++KL+E
Sbjct: 600 YTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF 659
Query: 562 MLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKG--KQLRIVKNL 619
G+ + G + E+ + + HSE+LA AFG+ + +++ KNL
Sbjct: 660 -------DGF---MEGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNL 709
Query: 620 RVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
R C DCH K +S EI++RD RFH FK+G CSC DYW
Sbjct: 710 RACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 6/258 (2%)
Query: 216 RMPVRN--LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAF 273
RM + N + N +L Y + L A ++F EM + VS +TMI A G D+A
Sbjct: 110 RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
G F +L G +P T +L + A +FG+ +H + ++G +S+ +++ Y
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMY 229
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
KCG + A+ VF M+V + V+ T ++ G G +AL+LF ++ GV D F
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKP-VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 394 ISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP 453
+L AC+ + G +I + + L G+E + +VD Y + + A Q
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKL-GLESEVSVGTPLVDFYIKCSSFESACRAF-QEI 346
Query: 454 ISPNAVIWRTLL-GACSI 470
PN V W ++ G C +
Sbjct: 347 REPNDVSWSAIISGYCQM 364
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 17/292 (5%)
Query: 30 LLSKCSSLKPT---KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPN 86
+L C+SL+ KQIH + GL + + G L+ + S + A R FQ
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESE-VSVGTPLVDFYIKCS-SFESACRAFQEIRE 348
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P+ ++ +I F +R +SF++ + + G Q
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
+H A + + + LI+MY +CG + A VF+ M P++V W A ++ G+
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 207 VAGARGVFGRMPV----RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVS-----WS 257
+ A +F +M N ++ +L + AG + + M K +V+ +
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYD 528
Query: 258 TMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKI 309
MI A +G D+A F + + E P+ +S LS C E G+I
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFE---PDAMSWKCFLSGCWTHKNLELGEI 577
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM----E 315
+V L+ + ++AF F +E+ + G+ + S + AC + + G++LH M E
Sbjct: 55 LVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIE 114
Query: 316 KSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEAL 375
L + N ++ Y +C ++ A +F MS + VS T++I+ A G ++A+
Sbjct: 115 NPSVL----LQNCVLQMYCECRSLEDADKLFDEMS-ELNAVSRTTMISAYAEQGILDKAV 169
Query: 376 QLFHEMEESGVRPDGITFISLL 397
LF M SG +P + +LL
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLL 191
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 204/664 (30%), Positives = 317/664 (47%), Gaps = 47/664 (7%)
Query: 36 SLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTL 95
L K++H H+ G + + L+ V D + A LF P D +N +
Sbjct: 211 DLARGKEVHVHVVRYG-YELDIDVVNALITMYVKCGD-VKSARLLFDRMPRRDIISWNAM 268
Query: 96 IRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHG 155
I F MR +V PD + + G + G +H G
Sbjct: 269 ISGYFENGMCHEGLELFFAMR-GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 156 FDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN-------------------- 195
F + V +L MY G A ++F M ++V+W
Sbjct: 328 FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR 387
Query: 196 ---------------AAVTACFRCGDVAGARGVFGRMPVRNLTSW----NVMLAGYTKAG 236
A ++AC GD+ + L S+ N ++ Y+K
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCK 447
Query: 237 ELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLS 296
+ A +F +P K+ +SW+++I GL N +A F R++ + ++PN ++LT L+
Sbjct: 448 CIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALA 506
Query: 297 ACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIV 356
ACA+ GA GK +H + ++G + NAL+D Y +CG + A F S + +
Sbjct: 507 ACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN--SQKKDVT 564
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM 416
SW ++ G + G G ++LF M +S VRPD ITFISLL CS S +V QG FSKM
Sbjct: 565 SWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM 624
Query: 417 KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIEL 476
++ YG+ P ++HY C+VDL GRA L +A++FI +MP++P+ +W LL AC IH I+L
Sbjct: 625 ED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDL 683
Query: 477 AELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINK 536
EL + E+D + G ++LL N+YA GKW++V +RR M E + G S +E+
Sbjct: 684 GELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKG 743
Query: 537 VMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSE 596
++ F++ +K + T+E + L ++ +E G D E +++ HSE
Sbjct: 744 KVHAFLSDDKYHPQTKEINTVLEGFYEKM-SEVGLTKISESSSMDETEISRDEIFCGHSE 802
Query: 597 KLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLC 656
+ A AFG+ G + + KNL +C +CH +K ISK + EI VRD FH FKDG C
Sbjct: 803 RKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGEC 862
Query: 657 SCRD 660
SC D
Sbjct: 863 SCGD 866
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 201/410 (49%), Gaps = 53/410 (12%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
V PD ++F L+ L G ++H R+G++ + V LI+MY +CGD +SAR
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 181 RVFDEMPEPNVVTWNA-----------------------------------AVTACFRCG 205
+FD MP ++++WNA ++AC G
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 206 DVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIV 261
D R + + +++ N + Y AG A ++FS M KD VSW+TMI
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLY 321
G +N D+A +R + ++ ++P+E+++ VLSACA G + G LH K+ +
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
V N LI+ YSKC + A +F N+ ++++SWTSIIAGL ++ EAL +M
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGCEIFSK-MKNLYGIEPTIEHYGCMVDLYGRAA 440
+ + ++P+ IT + L AC+ G + G EI + ++ G++ + + ++D+Y R
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYVRCG 547
Query: 441 RLHKAY-EFICQMPISPNAVIWRTLLGACSIHGN----IELAE-LVKARL 484
R++ A+ +F Q + W LL S G +EL + +VK+R+
Sbjct: 548 RMNTAWSQFNSQ---KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRV 594
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 162/370 (43%), Gaps = 43/370 (11%)
Query: 142 KPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTAC 201
+ G++++ A V +G ++M+ G+ A VF +M E N+ +WN V
Sbjct: 111 EEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGY 170
Query: 202 FRCGDVAGARGVFGRM-----------------------------------PVR-----N 221
+ G A ++ RM VR +
Sbjct: 171 AKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD 230
Query: 222 LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR 281
+ N ++ Y K G++ AR +F MP +D +SW+ MI G NG + F +
Sbjct: 231 IDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRG 290
Query: 282 EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
+ P+ ++LT V+SAC G G+ +H ++ +GF SV N+L Y G+
Sbjct: 291 LSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWRE 350
Query: 342 AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
A+ +F M + IVSWT++I+G + ++A+ + M++ V+PD IT ++L AC+
Sbjct: 351 AEKLFSRME-RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACA 409
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIW 461
G ++ G E+ I I ++++Y + + KA + +P N + W
Sbjct: 410 TLGDLDTGVELHKLAIKARLISYVIVANN-LINMYSKCKCIDKALDIFHNIP-RKNVISW 467
Query: 462 RTLLGACSIH 471
+++ ++
Sbjct: 468 TSIIAGLRLN 477
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 140/341 (41%), Gaps = 43/341 (12%)
Query: 132 LKGVANGGSLKPGTQL--HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFD----E 185
L G+ G L+ +L Q R D VFV + + E +V+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRA--QEEGSKVYSIALSS 123
Query: 186 MPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVF 245
M V NA + R G++ A VFG+M RNL SWNV++ GY K
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAK----------- 172
Query: 246 SEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF-RELLREGIRPNEVSLTGVLSACAQAGAS 304
G FD+A + R L G++P+ + VL C
Sbjct: 173 --------------------QGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDL 212
Query: 305 EFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAG 364
GK +H + + G+ V NALI Y KCG+V A+L+F M R I+SW ++I+G
Sbjct: 213 ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP-RRDIISWNAMISG 271
Query: 365 LAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEP 424
+G E L+LF M V PD +T S++ AC G G +I + + G
Sbjct: 272 YFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT-GFAV 330
Query: 425 TIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL 465
I + +Y A +A + +M + V W T++
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTMI 370
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 277/534 (51%), Gaps = 39/534 (7%)
Query: 11 PSSGTEEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTI 70
PSSG+ +S R + ++CS+++ KQIH L TGL + + ++L C +
Sbjct: 17 PSSGS---LSGNTYLRLID--TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASP 71
Query: 71 SDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMR-RHPTVFPDSFSFA 129
SD ++YA +F + + F++NT+IR FI M P+V P ++
Sbjct: 72 SD-MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYP 130
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEP 189
K G + G QLH + G + F+ T++ MY CG A R+F M
Sbjct: 131 SVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF 190
Query: 190 NVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMP 249
+VV +WN M+ G+ K G + A+ +F EMP
Sbjct: 191 DVV-------------------------------AWNSMIMGFAKCGLIDQAQNLFDEMP 219
Query: 250 LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKI 309
++ VSW++MI G NG F A FRE+ + ++P+ ++ +L+ACA GASE G+
Sbjct: 220 QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW 279
Query: 310 LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHG 369
+H ++ ++ F S V ALID Y KCG + VF + + + W S+I GLA +G
Sbjct: 280 IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE-CAPKKQLSCWNSMILGLANNG 338
Query: 370 HGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHY 429
E A+ LF E+E SG+ PD ++FI +L AC+HSG V + E F MK Y IEP+I+HY
Sbjct: 339 FEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHY 398
Query: 430 GCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDP 489
MV++ G A L +A I MP+ + VIW +LL AC GN+E+A+ L ++DP
Sbjct: 399 TLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDP 458
Query: 490 NNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVA 543
+ + +VLLSN YA G +++ V R M E+ M K G S IE++ ++ F++
Sbjct: 459 DETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFIS 512
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 296/553 (53%), Gaps = 47/553 (8%)
Query: 154 HGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGV 213
+GF+ ++ ++ M+ +CG ARR+FDE+PE N+ ++ + ++ G+ A +
Sbjct: 152 NGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 214 FGRMPVRNLT-----SWNVML---AG--------------------------------YT 233
F +M L+ ++ VML AG Y+
Sbjct: 212 F-KMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYS 270
Query: 234 KAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTG 293
K G++ AR F MP K V+W+ +I G A +G ++A ++ G+ ++ +L+
Sbjct: 271 KCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSI 330
Query: 294 VLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGR 353
++ + E K H + ++GF N AL+D YSK G V A+ VF + +
Sbjct: 331 MIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RK 389
Query: 354 SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIF 413
+I+SW +++ G A HG G +A++LF +M + V P+ +TF+++L AC++SGL EQG EIF
Sbjct: 390 NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIF 449
Query: 414 SKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGN 473
M ++GI+P HY CM++L GR L +A FI + P+ +W LL AC + N
Sbjct: 450 LSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQEN 509
Query: 474 IELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIE 533
+EL +V +L M P G++V++ N+Y GK + + T+ + + P + +E
Sbjct: 510 LELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVE 569
Query: 534 INKVMYGFVAGEKPNEVTE----EAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKED 589
+ + F++G++ + E + + K+ E+M + +E GY+ + + +L D++E+E+E
Sbjct: 570 VGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEI-SEYGYSEEEQHLLPDVDEKEEER 628
Query: 590 SVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFH 649
HSEKLA A+G+ P+ L+I +N R+C +CH V++ IS E++VRD SRFH
Sbjct: 629 VGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFH 688
Query: 650 LFKDGLCSCRDYW 662
FK+G CSC YW
Sbjct: 689 HFKEGKCSCGGYW 701
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 9/287 (3%)
Query: 191 VVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS----WNVMLAGYTKAGELGLARRVFS 246
V T++A V AC R + + V+G M N +L + K G + ARR+F
Sbjct: 123 VSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFD 182
Query: 247 EMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEF 306
E+P ++ S+ ++I G + G++ +AF F+ + E + +L A A G+
Sbjct: 183 EIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYV 242
Query: 307 GKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLA 366
GK LH K G + + V+ LID YSKCG++ A+ F M ++ V+W ++IAG A
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIAGYA 301
Query: 367 MHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM-KNLYGIEPT 425
+HG+ EEAL L ++M +SGV D T ++ + +E + + + +N G E
Sbjct: 302 LHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN--GFESE 359
Query: 426 IEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
I +VD Y + R+ A ++P N + W L+G + HG
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANHG 405
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 165/411 (40%), Gaps = 55/411 (13%)
Query: 33 KCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLL---HCAVTISDALHYALRLFQHFPNPDT 89
+ S++ K+++ + G ++LL C + I A RLF P +
Sbjct: 135 RLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIID-----ARRLFDEIPERNL 189
Query: 90 FMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHC 149
+ Y ++I F +M ++ +FA L+ A GS+ G QLH
Sbjct: 190 YSYYSIISGFVNFGNYVEAFELF-KMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHV 248
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAG 209
A + G + FV LI MY +CGD E AR F+ MPE V WN + G
Sbjct: 249 CALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEE 308
Query: 210 ARGVFGRMP----------------------------------VRN-----LTSWNVMLA 230
A + M +RN + + ++
Sbjct: 309 ALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVD 368
Query: 231 GYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
Y+K G + AR VF ++P K+ +SW+ ++ G A++G A F +++ + PN V+
Sbjct: 369 FYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVT 428
Query: 291 LTGVLSACAQAGASEFG-KILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM 349
VLSACA +G SE G +I E G + +I+ + G + A R
Sbjct: 429 FLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRA 488
Query: 350 SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES--GVRPDGITFISLLY 398
+ ++ W +++ M +E L+L + E G+ P+ + ++Y
Sbjct: 489 PLKTTVNMWAALLNACRM----QENLELGRVVAEKLYGMGPEKLGNYVVMY 535
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 145/335 (43%), Gaps = 20/335 (5%)
Query: 251 KDDVSWSTMIVGLAHNGSFDQAFGFFREL-LREGIRPNEVSLTGVLSACAQAGASEFGKI 309
K V+ + I L F +AF F L +R + + ++ AC + + K
Sbjct: 85 KSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKR 144
Query: 310 LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHG 369
++GFM +GF + N ++ + KCG + A+ +F + R++ S+ SII+G G
Sbjct: 145 VYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIP-ERNLYSYYSIISGFVNFG 203
Query: 370 HGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHY 429
+ EA +LF M E + TF +L A + G + G ++ L ++ T
Sbjct: 204 NYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSC 263
Query: 430 GCMVDLYGRAARLHKAY-EFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEM- 487
G ++D+Y + + A F C MP V W ++ ++HG E A + L +M
Sbjct: 264 G-LIDMYSKCGDIEDARCAFEC-MP-EKTTVAWNNVIAGYALHGYSEEALCL---LYDMR 317
Query: 488 DPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ---SMVKTPGWSMIEINKVMYGFVAG 544
D S D LS + ++ K + +T+Q S+++ S I N + F +
Sbjct: 318 DSGVSIDQFTLSIMIRISTKLAKL-----ELTKQAHASLIRNGFESEIVANTALVDFYSK 372
Query: 545 EKPNEVTEEAHDKL-REIMLRLRA-EAGYAPQVRG 577
+ DKL R+ ++ A GYA RG
Sbjct: 373 WGRVDTARYVFDKLPRKNIISWNALMGGYANHGRG 407
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 283/552 (51%), Gaps = 50/552 (9%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFP-- 85
+++LS+ +L T+Q+H + + G + G L + A S+ L +A F P
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDE-VVLGSSLTN-AYIQSNRLDFATSSFNRIPCW 68
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFI--QMRRHPTVFPDSFSFAFALKGVANGGSLKP 143
+ +NT++ + +MRRH DSF+ FA+K G L+
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGV-DSFNLVFAIKACVGLGLLEN 127
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTW--------- 194
G +H A ++G D +V +L+ MY + G ESA++VFDE+P N V W
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 195 ---------------------NAAVTACF--RCGDV-AGARG--VFGRMPVRNLTSWNVM 228
+A C CG+V AG G V G R+ +
Sbjct: 188 YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 229 LAG-----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREG 283
L Y K L AR++F ++ V W+T+I G A +AF FR++LRE
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 284 IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN-NALIDTYSKCGNVAMA 342
I PN+ +L +L +C+ G+ GK +HG+M ++G + + +VN + ID Y++CGN+ MA
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG-IEMDAVNFTSFIDMYARCGNIQMA 366
Query: 343 QLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSH 402
+ VF +M R+++SW+S+I ++G EEAL FH+M+ V P+ +TF+SLL ACSH
Sbjct: 367 RTVF-DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSH 425
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWR 462
SG V++G + F M YG+ P EHY CMVDL GRA + +A FI MP+ P A W
Sbjct: 426 SGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWG 485
Query: 463 TLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQS 522
LL AC IH ++LA + +L M+P S +VLLSN+YA AG W+ V +RR M +
Sbjct: 486 ALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKG 545
Query: 523 MVKTPGWSMIEI 534
K G S E+
Sbjct: 546 YRKHVGQSATEV 557
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 274/520 (52%), Gaps = 49/520 (9%)
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
D F YN LI + +MR + + PD ++F LKG ++ L ++
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRAN-GILPDKYTFPSLLKG-SDAMELSDVKKV 182
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE-PNVVTWNAAV---TACFR 203
H AF+ GFD+ +VG+ L++ Y + E A++VFDE+P+ + V WNA V + FR
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 204 --------------------------------CGDVAGARGVFGRMPVR-----NLTSWN 226
GD+ R + G + V+ ++ N
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG-LAVKTGSGSDIVVSN 301
Query: 227 VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
++ Y K+ L A +F M +D +W++++ + G D F +L GIRP
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRP 361
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN----NALIDTYSKCGNVAMA 342
+ V+LT VL C + + G+ +HG+M SG L S N N+L+D Y KCG++ A
Sbjct: 362 DIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDA 421
Query: 343 QLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSH 402
++VF +M V S SW +I G + GE AL +F M +GV+PD ITF+ LL ACSH
Sbjct: 422 RMVFDSMRVKDS-ASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSH 480
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWR 462
SG + +G ++M+ +Y I PT +HY C++D+ GRA +L +AYE PI N V+WR
Sbjct: 481 SGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWR 540
Query: 463 TLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQS 522
++L +C +HGN +LA + RL E++P + G +VL+SNVY AGK+++V+ +R M +Q+
Sbjct: 541 SILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQN 600
Query: 523 MVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIM 562
+ KTPG S I + ++ F G + + + HD L ++
Sbjct: 601 VKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVI 640
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 140/354 (39%), Gaps = 49/354 (13%)
Query: 77 ALRLFQHFPN-PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGV 135
A ++F P+ D+ ++N L+ F +MR V + L
Sbjct: 214 AQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE-GVGVSRHTITSVLSAF 272
Query: 136 ANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN 195
G + G +H A + G + + V LI MYG+ E A +F+ M E ++ TWN
Sbjct: 273 TVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWN 332
Query: 196 AAVTACFRCGDVAGARGVFGRM-------PVRNLTS------------------------ 224
+ + CGD G +F RM + LT+
Sbjct: 333 SVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVS 392
Query: 225 ------------WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQA 272
N ++ Y K G+L AR VF M +KD SW+ MI G + A
Sbjct: 393 GLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELA 452
Query: 273 FGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS-GFLYISSVNNALID 331
F + R G++P+E++ G+L AC+ +G G+ ME L S +ID
Sbjct: 453 LDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVID 512
Query: 332 TYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEAL---QLFHEME 382
+ + A + + + + V W SI++ +HG+ + AL + HE+E
Sbjct: 513 MLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELE 566
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 11/282 (3%)
Query: 190 NVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL-----TSWNVMLAGYTKAGELGLARRV 244
NV T A + C + D + + G M + + ++ Y K G + A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 245 FSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGAS 304
F +D ++ +I G NGS A +RE+ GI P++ + +L S
Sbjct: 119 FGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 305 EFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAG 364
+ K+ HG K GF V + L+ +YSK +V AQ VF + V W +++ G
Sbjct: 178 DVKKV-HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Query: 365 LAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS-KMKNLYGIE 423
+ E+AL +F +M E GV T S+L A + SG ++ G I +K G +
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 296
Query: 424 PTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL 465
+ + ++D+YG++ L +A M + W ++L
Sbjct: 297 IVVSN--ALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVL 335
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS-SVNNALIDTYSKCGNVAMAQLV 345
N + L CAQ G+ +HGFM + GFL S +L++ Y+KCG + A LV
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
F R + + ++I+G ++G +A++ + EM +G+ PD TF SLL L
Sbjct: 119 FGGSE--RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL 176
Query: 406 VEQGCEIFSKMKNLYGIEPTIE-HYGC-----MVDLYGRAARLHKAYEFICQMPISPNAV 459
S +K ++G+ + C +V Y + + A + ++P ++V
Sbjct: 177 --------SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSV 228
Query: 460 IWRTLLGACSIHGNIELAELVKARLAE 486
+W L+ S E A LV +++ E
Sbjct: 229 LWNALVNGYSQIFRFEDALLVFSKMRE 255
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 277/550 (50%), Gaps = 51/550 (9%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNP 87
+ L+S+CSSL+ KQI T L L L K++ + A + ++ L
Sbjct: 10 LELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVL 69
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVF-----PDSFSFAFALKGVANGGSLK 142
+F YNTL+ P + + + T PD F+F K ++
Sbjct: 70 SSFSYNTLL------SSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIR 123
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACF 202
G Q+H + GF ++V +L+ YG CG+S +A +VF EMP +VV+W +T
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFT 183
Query: 203 RCGDVAGARGVFGRMPVR-NLTSW-----------------------------------N 226
R G A F +M V NL ++ N
Sbjct: 184 RTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 227 VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL-LREGIR 285
++ Y K +L A RVF E+ KD VSW++MI GL H +A F + GI+
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIK 303
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
P+ LT VLSACA GA + G+ +H ++ +G + + + A++D Y+KCG + A +
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
F + +++ +W +++ GLA+HGHG E+L+ F EM + G +P+ +TF++ L AC H+GL
Sbjct: 364 FNGIR-SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGL 422
Query: 406 VEQGCEIFSKMKNL-YGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
V++G F KMK+ Y + P +EHYGCM+DL RA L +A E + MP+ P+ I +
Sbjct: 423 VDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAI 482
Query: 465 LGACSIHGNI-ELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSM 523
L AC G + EL + + +++ +SG +VLLSN++A +W DV IRR M + +
Sbjct: 483 LSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGI 542
Query: 524 VKTPGWSMIE 533
K PG S IE
Sbjct: 543 SKVPGSSYIE 552
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 286/600 (47%), Gaps = 54/600 (9%)
Query: 16 EEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALH 75
EEA LE ++ LL KC S+ +QI + + H + L+ AV + D +
Sbjct: 29 EEARRGDLERDFLFLLKKCISVNQLRQIQAQMLL-----HSVEKPNFLIPKAVELGD-FN 82
Query: 76 YALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGV 135
Y+ LF P+ + +N +IR + + + PD F++ F
Sbjct: 83 YSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIAC 142
Query: 136 ANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN 195
A + G +H F+ G + V + +LI MY +CG AR++FDE+ E + V+WN
Sbjct: 143 AKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWN 202
Query: 196 AAVTACFRCGDVAGARGVFGRMPV-------RNLTSW----------------------- 225
+ ++ G A +F +M R L S
Sbjct: 203 SMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK 262
Query: 226 ---------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
+ +++ Y K G+L ARRVF++M KD V+W+ MI + NG +AF F
Sbjct: 263 KIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLF 322
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
E+ + G+ P+ +L+ VLSAC GA E GK + + + V L+D Y KC
Sbjct: 323 FEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKC 382
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
G V A VF M V ++ +W ++I A GH +EAL LF M V P ITFI +
Sbjct: 383 GRVEEALRVFEAMPV-KNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGV 438
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISP 456
L AC H+GLV QGC F +M +++G+ P IEHY ++DL RA L +A+EF+ + P P
Sbjct: 439 LSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKP 498
Query: 457 NAVIWRTLLGACSIHGNIELAELVKARLAEM-DPNNSGDHVLLSNVYAVAGKWKDVVSIR 515
+ ++ +LGAC ++ + E L EM + N+G++V+ SNV A W + +R
Sbjct: 499 DEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMR 558
Query: 516 RTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAH----DKLREIMLRLRAEAGY 571
M ++ +VKTPG S IEI + F+AG + E D L E M R R E GY
Sbjct: 559 ALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERYEFGY 618
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 196/682 (28%), Positives = 323/682 (47%), Gaps = 66/682 (9%)
Query: 24 EPRWVSLLSKCS--SLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLF 81
E +V LL S L+ K IH+++ V G+ + + K L + + A+R+
Sbjct: 225 EFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVL--KTSLVDFYSQFSKMEDAVRVL 282
Query: 82 QHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSL 141
D F++ +++ F++MR + P++F+++ L + SL
Sbjct: 283 NSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR-SLGLQPNNFTYSAILSLCSAVRSL 341
Query: 142 KPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSE-SARRVFDEMPEPNVVTWNAAVTA 200
G Q+H Q + GF+ VG L+ MY +C SE A RVF M PNVV+W +
Sbjct: 342 DFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILG 401
Query: 201 CFRCGDVAGARGVFGRMPVRNLTSWNVMLAG----------------------------- 231
G V G+ M R + V L+G
Sbjct: 402 LVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGE 461
Query: 232 ----------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR 281
Y + ++ A V M +D++++++++ G + A +
Sbjct: 462 MVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 282 EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
+GIR +++SL G +SA A GA E GK LH + KSGF +SV N+L+D YSKCG++
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED 581
Query: 342 AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
A+ VF ++ +VSW +++GLA +G AL F EM PD +TF+ LL ACS
Sbjct: 582 AKKVFEEIATP-DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS 640
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIW 461
+ L + G E F MK +Y IEP +EHY +V + GRA RL +A + M + PNA+I+
Sbjct: 641 NGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIF 700
Query: 462 RTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ 521
+TLL AC GN+ L E + + + P++ ++LL+++Y +GK + R MTE+
Sbjct: 701 KTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEK 760
Query: 522 SMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHD 581
+ K G S +E+ ++ FV+ E + R+ G ++ + +
Sbjct: 761 RLSKKLGKSTVEVQGKVHSFVS----------------EDVTRVDKTNGIYAEIESIKEE 804
Query: 582 IEE----EEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQ 637
I+ ++ S HS K A +G + +VKN +C DCH + ++++
Sbjct: 805 IKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVD 864
Query: 638 VEIIVRDRSRFHLFKDGLCSCR 659
+I VRD ++ H+FK+G CSC+
Sbjct: 865 KKITVRDGNQVHIFKNGECSCK 886
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 210/498 (42%), Gaps = 49/498 (9%)
Query: 22 TLEPRWVSLLSKCSSLKPTKQIHTHLYVT--GLHTHPLFFGKLLLHCAVTISDALHYALR 79
L+ + +LS C S +H H V GL + LL +D + A +
Sbjct: 22 NLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLL--SLYLKTDGIWNARK 79
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
LF + F + +I F +M T P+ F+F+ ++ A
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGT-HPNEFTFSSVVRSCAGLR 138
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT 199
+ G ++H + GF+ + VG++L +Y +CG + A +F + + ++W ++
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 200 AC-------------------------FRCGDVAGARGVFGRMPVRNLTSWNVMLAG--- 231
+ F + GA G + + S N+++ G
Sbjct: 199 SLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHS-NIIVRGIPL 257
Query: 232 -----------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELL 280
Y++ ++ A RV + +D W++++ G N +A G F E+
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
G++PN + + +LS C+ + +FGK +H K GF + V NAL+D Y KC
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 341 M-AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA 399
+ A VF M V ++VSWT++I GL HG ++ L EM + V P+ +T +L A
Sbjct: 378 VEASRVFGAM-VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 400 CSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAV 459
CS V + EI + + + ++ + +VD Y + ++ A+ I M N +
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDN-I 494
Query: 460 IWRTLLGACSIHGNIELA 477
+ +L+ + G E+A
Sbjct: 495 TYTSLVTRFNELGKHEMA 512
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 219 VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRE 278
+ NL N +L+ Y K + AR++F EM + +W+ MI + F A F E
Sbjct: 55 LENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEE 114
Query: 279 LLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGN 338
++ G PNE + + V+ +CA +G +HG + K+GF S V ++L D YSKCG
Sbjct: 115 MMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ 174
Query: 339 VAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLY 398
A +F ++ +I SWT +I+ L EALQ + EM ++GV P+ TF+ LL
Sbjct: 175 FKEACELFSSLQNADTI-SWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG 233
Query: 399 ACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNA 458
A S GL E G I S + + GI + +VD Y + +++ A + +
Sbjct: 234 ASSFLGL-EFGKTIHSNII-VRGIPLNVVLKTSLVDFYSQFSKMEDAVR-VLNSSGEQDV 290
Query: 459 VIWRTLLGAC--SIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAV 504
+W +++ ++ + ++ R + PNN +LS AV
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAV 338
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 28/345 (8%)
Query: 17 EAMSNTLEPRWVSL---LSKCSSLKPTKQI-HTHLYVTGLHTH-PLFFGKLLLHCAVTIS 71
E + +EP V+L L CS L+ +++ H Y+ H + G L+ A S
Sbjct: 417 EMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD-AYASS 475
Query: 72 DALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFA 131
+ YA + + D Y +L+ I + D S
Sbjct: 476 RKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMAL-SVINYMYGDGIRMDQLSLPGF 534
Query: 132 LKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNV 191
+ AN G+L+ G LHC + + GF V +L+ MY +CG E A++VF+E+ P+V
Sbjct: 535 ISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDV 594
Query: 192 VTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSE 247
V+WN V+ G ++ A F M ++ + ++ ++L+ + L F
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQV 654
Query: 248 MP----LKDDVSWSTMIVG-LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG 302
M ++ V +VG L G ++A G + ++PN + +L AC G
Sbjct: 655 MKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM---HLKPNAMIFKTLLRACRYRG 711
Query: 303 ASEFGKILH----GFMEKSGFLYISSVNNALIDTYSKCGNVAMAQ 343
G+ + LYI L D Y + G +AQ
Sbjct: 712 NLSLGEDMANKGLALAPSDPALYI-----LLADLYDESGKPELAQ 751
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/572 (31%), Positives = 283/572 (49%), Gaps = 51/572 (8%)
Query: 41 KQIHTHLYVTGLH--THPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRX 98
KQIH L + + LF +LL C T + YA RL ++++LI
Sbjct: 18 KQIHCLLLTSPIFYTRRDLFLSRLLRRCC-TAATQFRYARRLLCQLQTLSIQLWDSLIGH 76
Query: 99 XXXXXXXXXXXH--PFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGF 156
+ MRR+ V P +F LK V P Q H + G
Sbjct: 77 FSGGITLNRRLSFLAYRHMRRN-GVIPSRHTFPPLLKAVFKLRDSNP-FQFHAHIVKFGL 134
Query: 157 DTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGR 216
D+ FV +LIS Y G + A R+FD + +VVTW A + R G + A F
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 217 MP-----VRNLTSWNVMLAG-----------------------------------YTKAG 236
M +T +V+ A Y K
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCS 254
Query: 237 ELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLS 296
A++VF EMP ++ V+W+ +I G + FD+ F E+L+ + PNE +L+ VLS
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
Query: 297 ACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIV 356
ACA GA G+ +H +M K+ ++ LID Y KCG + A LVF + +++
Sbjct: 315 ACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKNVY 373
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM 416
+WT++I G A HG+ +A LF+ M S V P+ +TF+++L AC+H GLVE+G +F M
Sbjct: 374 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433
Query: 417 KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIEL 476
K + +EP +HY CMVDL+GR L +A I +MP+ P V+W L G+C +H + EL
Sbjct: 434 KGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYEL 493
Query: 477 AELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINK 536
+ +R+ ++ P++SG + LL+N+Y+ + W +V +R+ M +Q +VK+PG+S IE+
Sbjct: 494 GKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKG 553
Query: 537 VMYGFVA--GEKPNEVTEEAHDKLREIMLRLR 566
+ F+A +KP E +++ + L + +++R
Sbjct: 554 KLCEFIAFDDKKPLE-SDDLYKTLDTVGVQMR 584
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 121/317 (38%), Gaps = 22/317 (6%)
Query: 4 MSYFIPTPSSGTEEAMSNTLEPRWVSLLS---KCSSLKPTKQIHTHLYVTGLHTHPLFFG 60
M YF+ +G E VS+L K ++ + +H TG +F G
Sbjct: 189 MVYFVEMKKTGVAAN-----EMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 61 KLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPT 120
L+ S A ++F P+ + + LI F +M +
Sbjct: 244 SSLVDMYGKCS-CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLK-SD 301
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
V P+ + + L A+ G+L G ++HC ++ + + GTTLI +Y +CG E A
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 181 RVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAG 236
VF+ + E NV TW A + G A +F M N ++ +L+ G
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGG 421
Query: 237 ELGLARRVFSEMPLKDDVS-----WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
+ RR+F M + ++ ++ M+ G ++A R + P V
Sbjct: 422 LVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIE---RMPMEPTNVVW 478
Query: 292 TGVLSACAQAGASEFGK 308
+ +C E GK
Sbjct: 479 GALFGSCLLHKDYELGK 495
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 304/617 (49%), Gaps = 53/617 (8%)
Query: 3 LMSYFIPTPSSGTEEAMSNTLEPRWVSLLSKCSS---LKPTKQIHTHLYVTGLHTHPLFF 59
+M F+ SSG N + + SLLS C++ L+ Q H+ + L + LF
Sbjct: 412 VMELFMDMKSSGY-----NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN-LFV 465
Query: 60 GKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHP 119
G L+ AL A ++F+ + D +NT+I F +M
Sbjct: 466 GNALVDMYAKCG-ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 120 TVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESA 179
V D A LK + L G Q+HC + + G D + G++LI MY +CG + A
Sbjct: 525 IV-SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 180 RRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLA--------- 230
R+VF +PE +VV+ NA + A + ++ A +F M R + + A
Sbjct: 584 RKVFSSLPEWSVVSMNALI-AGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKP 642
Query: 231 ----------------GYTKAGE------LGL---------ARRVFSEMPL-KDDVSWST 258
G++ GE LG+ A +FSE+ K V W+
Sbjct: 643 ESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTG 702
Query: 259 MIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG 318
M+ G + NG +++A F++E+ +G+ P++ + VL C+ + G+ +H +
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 319 FLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLF 378
+N LID Y+KCG++ + VF M ++VSW S+I G A +G+ E+AL++F
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 822
Query: 379 HEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGR 438
M +S + PD ITF+ +L ACSH+G V G +IF M YGIE ++H CMVDL GR
Sbjct: 823 DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGR 882
Query: 439 AARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLL 498
L +A +FI + P+A +W +LLGAC IHG+ E+ +L E++P NS +VLL
Sbjct: 883 WGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLL 942
Query: 499 SNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKL 558
SN+YA G W+ ++R+ M ++ + K PG+S I++ + + F AG+K + + L
Sbjct: 943 SNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFL 1002
Query: 559 REIMLRLRAEAGYAPQV 575
++ ++ +A P +
Sbjct: 1003 EDLYDLMKDDAVVNPDI 1019
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 198/445 (44%), Gaps = 29/445 (6%)
Query: 36 SLKPTKQIHTHLYVTGLHTHPLF---FGKLLLHCAVTISDALHYALRLFQHFPNPDTFMY 92
+L+ K +H+ + G+ + L CA + YA + F F D +
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCA-----QVSYAEKQFD-FLEKDVTAW 128
Query: 93 NTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAF 152
N+++ F+ + + +FP+ F+F+ L A +++ G Q+HC
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQ-IFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 153 RHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARG 212
+ G + + + G L+ MY +C ARRVF+ + +PN V W + + G A
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 213 VFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGS 268
VF RM + ++ ++ Y + G+L AR +F EM D V+W+ MI G G
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC 307
Query: 269 FDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNA 328
A +F + + ++ +L VLSA + G ++H K G V ++
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 329 LIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRP 388
L+ YSKC + A VF + ++ V W ++I G A +G + ++LF +M+ SG
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALE-EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 389 DGITFISLLYACSHSGLVEQGCEIFSKM------KNLYGIEPTIEHYGCMVDLYGRAARL 442
D TF SLL C+ S +E G + S + KNL+ +VD+Y + L
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF-------VGNALVDMYAKCGAL 479
Query: 443 HKAYEFICQMPISPNAVIWRTLLGA 467
A + +M N V W T++G+
Sbjct: 480 EDARQIFERMCDRDN-VTWNTIIGS 503
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 187/452 (41%), Gaps = 36/452 (7%)
Query: 30 LLSKC---SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPN 86
+LS C ++++ +QIH + GL + G L+ A D + A R+F+ +
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKC--DRISDARRVFEWIVD 223
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P+T + L F +MR PD +F + G LK
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR-PDHLAFVTVINTYIRLGKLKDARL 282
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
L F V +IS +G+ G A F M + +V + + + G
Sbjct: 283 L----FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL------GS 332
Query: 207 VAGARGVFGRMPV--------------RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKD 252
V A G+ + + N+ + +++ Y+K ++ A +VF + K+
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 253 DVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHG 312
DV W+ MI G AHNG + F ++ G ++ + T +LS CA + E G H
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 313 FMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGE 372
+ K V NAL+D Y+KCG + A+ +F M R V+W +II +
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGSYVQDENES 511
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCM 432
EA LF M G+ DG S L AC+H + QG ++ + G++ + +
Sbjct: 512 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC-LSVKCGLDRDLHTGSSL 570
Query: 433 VDLYGRAARLHKAYEFICQMP----ISPNAVI 460
+D+Y + + A + +P +S NA+I
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 193/470 (41%), Gaps = 74/470 (15%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISM-YGECGDSESARRV 182
DSFSF L S P L + + H +H + L+ + G+C +S R+V
Sbjct: 15 DSFSFVRRL-------SYSP--DLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKS-RKV 64
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVF------GRMPVRNLTSWNVMLAGYTKAG 236
FDEMP+ + R G ++ + GR+ N ++ Y K
Sbjct: 65 FDEMPQR--------LALALRIGKAVHSKSLILGIDSEGRLG-------NAIVDLYAKCA 109
Query: 237 ELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLS 296
++ A + F + KD +W++M+ + G + F L I PN+ + + VLS
Sbjct: 110 QVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLS 168
Query: 297 ACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIV 356
CA+ EFG+ +H M K G S AL+D Y+KC ++ A+ VF + V + V
Sbjct: 169 TCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTV 227
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM 416
WT + +G G EEA+ +F M + G RPD + F++++ G ++ +F +M
Sbjct: 228 CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
Query: 417 KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL---LGACSIHGN 473
+ P + + M+ +G+ A E+ M S TL L A I N
Sbjct: 288 SS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 474 IELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIE 533
++L +V A ++ L SN+Y G S++
Sbjct: 343 LDLGLVVHAEAIKLG--------LASNIYV------------------------GSSLVS 370
Query: 534 INKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIE 583
+ A K E EE +D M+R A G + +V + D++
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 289 bits (739), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 275/550 (50%), Gaps = 49/550 (8%)
Query: 30 LLSKCSSLKPT---KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPN 86
+L C+ L+ K IH+H+ + T L+ A L A+++F P
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKC--GELEMAIKVFDEMPK 166
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
D +N +I F+ MRR + P+ + + G+L+ G
Sbjct: 167 RDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKA 226
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV-------- 198
+H R GF + V T ++ +Y + ARRVFD + N VTW+A +
Sbjct: 227 VHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEM 286
Query: 199 -----------------------------TACFRCGDVAGARGVFGRMP----VRNLTSW 225
C R GD++G R V + +LT
Sbjct: 287 IKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQ 346
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N +++ Y K G L A R FSE+ LKD +S++++I G N +++F F E+ GIR
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIR 406
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
P+ +L GVL+AC+ A G HG+ G+ +S+ NAL+D Y+KCG + +A+ V
Sbjct: 407 PDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRV 466
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
F M R IVSW +++ G +HG G+EAL LF+ M+E+GV PD +T +++L ACSHSGL
Sbjct: 467 FDTMH-KRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGL 525
Query: 406 VEQGCEIFSKM-KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
V++G ++F+ M + + + P I+HY CM DL RA L +AY+F+ +MP P+ + TL
Sbjct: 526 VDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTL 585
Query: 465 LGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMV 524
L AC + N EL V ++ + VLLSN Y+ A +W+D IR ++ ++
Sbjct: 586 LSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLL 644
Query: 525 KTPGWSMIEI 534
KTPG+S +++
Sbjct: 645 KTPGYSWVDV 654
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 221/499 (44%), Gaps = 64/499 (12%)
Query: 27 WVSLLSKC---SSLKPTKQIHTHLYVTGL----HTHPLFFGKLLLHCAVTISDALHYALR 79
++SLL C +L + IH HL L T + +L C + + A
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASC-----NEVELARH 56
Query: 80 LFQHFPNP--DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVAN 137
+F P+P + ++ +IR + +M + V P +++ F LK A
Sbjct: 57 VFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKML-NSGVRPTKYTYPFVLKACAG 115
Query: 138 GGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAA 197
++ G +H F T ++V T L+ Y +CG+ E A +VFDEMP+ ++V WNA
Sbjct: 116 LRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAM 175
Query: 198 VT------------------------------------ACFRCGDVAGARGVFG---RMP 218
++ A R G + + V G RM
Sbjct: 176 ISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMG 235
Query: 219 VRN-LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFG-FF 276
N L +L Y K+ + ARRVF K++V+WS MI G N +A FF
Sbjct: 236 FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFF 295
Query: 277 RELLREGI-RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSK 335
+ L+ + + V++ +L CA+ G G+ +H + K+GF+ +V N +I Y+K
Sbjct: 296 QMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAK 355
Query: 336 CGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFIS 395
G++ A F + + + ++S+ S+I G ++ EE+ +LFHEM SG+RPD T +
Sbjct: 356 YGSLCDAFRQFSEIGL-KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLG 414
Query: 396 LLYACSHSGLVEQG--CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP 453
+L ACSH + G C + + Y + +I + ++D+Y + +L A M
Sbjct: 415 VLTACSHLAALGHGSSCHGYCVVHG-YAVNTSICN--ALMDMYTKCGKLDVAKRVFDTMH 471
Query: 454 ISPNAVIWRTLLGACSIHG 472
+ V W T+L IHG
Sbjct: 472 -KRDIVSWNTMLFGFGIHG 489
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/586 (31%), Positives = 281/586 (47%), Gaps = 56/586 (9%)
Query: 29 SLLSKCSSL---KPTKQIHTHLYVTGLHTHPLFFGKLL---LHCAVTISDALHYALRLFQ 82
++LS CS L + KQIH H+ GL L+ + C I+ A +LF
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA-----AHKLFN 308
Query: 83 HFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLK 142
PN + + TL+ F M + + PD ++ + L A+ +L
Sbjct: 309 GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYACSSILTSCASLHALG 367
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACF 202
GTQ+H + +V +LI MY +C AR+VFD +VV +NA +
Sbjct: 368 FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427
Query: 203 RCG---DVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA-------------- 241
R G ++ A +F M R +L ++ +L LGL+
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 242 ---------------------RRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELL 280
R VF EM +KD V W++M G ++A F EL
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
RP+E + +++A + + G+ H + K G + NAL+D Y+KCG+
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 341 MAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
A F + + R +V W S+I+ A HG G++ALQ+ +M G+ P+ ITF+ +L AC
Sbjct: 608 DAHKAF-DSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 401 SHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI 460
SH+GLVE G + F M +GIEP EHY CMV L GRA RL+KA E I +MP P A++
Sbjct: 667 SHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 461 WRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTE 520
WR+LL C+ GN+ELAE DP +SG +LSN+YA G W + +R M
Sbjct: 726 WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKV 785
Query: 521 QSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLR 566
+ +VK PG S I INK ++ F++ +K + + ++ L ++++++R
Sbjct: 786 EGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 205/469 (43%), Gaps = 51/469 (10%)
Query: 43 IHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXX 102
+H + V GL + +L++ + + + YA ++F+ P + ++T++
Sbjct: 66 VHGQIIVWGLELDT-YLSNILINL-YSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHH 123
Query: 103 XXXXXXXHPFIQMRRHPTVFPDSF---SFAFALKGVANGGSLKPGTQLHCQAFRHGFDTH 159
F++ R P+ + SF A G+ G QL + GFD
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMV-FQLQSFLVKSGFDRD 182
Query: 160 VFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV 219
V+VGT LI Y + G+ + AR VFD +PE + VTW ++ C + G + +F ++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 220 RNL---------------------------------------TSWNVMLAGYTKAGELGL 240
N+ + NV++ Y K G +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 241 ARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQ 300
A ++F+ MP K+ +SW+T++ G N +A F + + G++P+ + + +L++CA
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 301 AGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTS 360
A FG +H + K+ S V N+LID Y+KC + A+ VF ++ +V + +
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF-DIFAAADVVLFNA 421
Query: 361 IIAGLAMHGHG---EEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
+I G + G EAL +F +M +RP +TF+SLL A + + +I M
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481
Query: 418 NLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLG 466
YG+ I ++D+Y L + +M + + VIW ++
Sbjct: 482 K-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV-KDLVIWNSMFA 528
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 148/316 (46%), Gaps = 43/316 (13%)
Query: 128 FAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP 187
FA L+ A+ L +H Q G + ++ LI++Y G AR+VF++MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 188 EPNVVTWNAAVTACFRCGDVAGARGVF-----------------------------GRMP 218
E N+V+W+ V+AC G + VF GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 219 VRNLTSW-------------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH 265
V L S+ +++ Y K G + AR VF +P K V+W+TMI G
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 266 NGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSV 325
G + F +L+ + + P+ L+ VLSAC+ E GK +H + + G +S+
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 326 NNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG 385
N LID+Y KCG V A +F M ++I+SWT++++G + +EA++LF M + G
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG 345
Query: 386 VRPDGITFISLLYACS 401
++PD S+L +C+
Sbjct: 346 LKPDMYACSSILTSCA 361
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 131/295 (44%), Gaps = 21/295 (7%)
Query: 27 WVSLLSKCSSLKP---TKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQH 83
+VSLL +SL +KQIH ++ GL+ +F G L+ L + +F
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNL-DIFAGSALIDVYSNCY-CLKDSRLVFDE 514
Query: 84 FPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKP 143
D ++N++ + F++++ PD F+FA + N S++
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER-PDEFTFANMVTAAGNLASVQL 573
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
G + HCQ + G + + ++ L+ MY +CG E A + FD +VV WN+ +++
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYAN 633
Query: 204 CGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWST- 258
G+ A + +M N ++ +L+ + AG + + F E+ L+ + T
Sbjct: 634 HGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQF-ELMLRFGIEPETE 692
Query: 259 ----MIVGLAHNGSFDQAFGFFRELLRE-GIRPNEVSLTGVLSACAQAGASEFGK 308
M+ L G ++A REL+ + +P + +LS CA+AG E +
Sbjct: 693 HYVCMVSLLGRAGRLNKA----RELIEKMPTKPAAIVWRSLLSGCAKAGNVELAE 743
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 254/450 (56%), Gaps = 1/450 (0%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYG 171
F++MR+ V +S + A K + + G+Q+H R + +F+G +L+SMY
Sbjct: 262 FLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYS 321
Query: 172 ECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG 231
+ G A+ VF M + V+WN+ +T + ++ A +F +MP +++ SW M+ G
Sbjct: 322 KLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKG 381
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
++ GE+ +F MP KD+++W+ MI NG +++A +F ++L++ + PN +
Sbjct: 382 FSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTF 441
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
+ VLSA A G +HG + K + SV N+L+ Y KCGN A +F +S
Sbjct: 442 SSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS- 500
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
+IVS+ ++I+G + +G G++AL+LF +E SG P+G+TF++LL AC H G V+ G +
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK 560
Query: 412 IFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIH 471
F MK+ Y IEP +HY CMVDL GR+ L A I MP P++ +W +LL A H
Sbjct: 561 YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTH 620
Query: 472 GNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSM 531
++LAEL +L E++P+++ +V+LS +Y++ GK +D I + + K PG S
Sbjct: 621 LRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSW 680
Query: 532 IEINKVMYGFVAGEKPNEVTEEAHDKLREI 561
I + ++ F+AG++ EE L+ I
Sbjct: 681 IILKGEVHNFLAGDESQLNLEEIGFTLKMI 710
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 162/366 (44%), Gaps = 15/366 (4%)
Query: 165 TLISMYGECGDSESARRVFDEMPEP--NVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL 222
T+I+ + G + A ++ E P + V N ++ R G A VF M V+ +
Sbjct: 149 TMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV 208
Query: 223 TSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE 282
S + M+ GY K G + AR +F M ++ ++W+ MI G G F+ FG F + +E
Sbjct: 209 VSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQE 268
Query: 283 G-IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
G ++ N +L + AC G +HG + + + + N+L+ YSK G +
Sbjct: 269 GDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGE 328
Query: 342 AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
A+ VF M + VSW S+I GL EA +LF +M D +++ ++ S
Sbjct: 329 AKAVFGVMK-NKDSVSWNSLITGLVQRKQISEAYELFEKMPG----KDMVSWTDMIKGFS 383
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR--LHKAYEFICQMPISPNAV 459
G + + E+F M I T + + Y A HK + Q + PN+
Sbjct: 384 GKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHK----MLQKEVCPNSY 439
Query: 460 IWRTLLGACSIHGNIELAELVKARLAEMD-PNNSGDHVLLSNVYAVAGKWKDVVSIRRTM 518
+ ++L A + ++ + R+ +M+ N+ L ++Y G D I +
Sbjct: 440 TFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI 499
Query: 519 TEQSMV 524
+E ++V
Sbjct: 500 SEPNIV 505
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 15/260 (5%)
Query: 158 THVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM 217
T +F + IS + G+ + A +F +M ++V+W A ++A G ++ A VF M
Sbjct: 48 TAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM 107
Query: 218 PVRNLTSWNVMLAGYTKAG-ELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
PVR TS+N M+ K +LG A +F ++P K+ VS++TMI G G FD+A +
Sbjct: 108 PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLY 167
Query: 277 REL---LREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
E R+ + N V L+G L A +E ++ G K +S ++++ Y
Sbjct: 168 AETPVKFRDSVASN-VLLSGYLRA---GKWNEAVRVFQGMAVKE---VVSC--SSMVHGY 218
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG-VRPDGIT 392
K G + A+ +F M+ R++++WT++I G G E+ LF M + G V+ + T
Sbjct: 219 CKMGRIVDARSLFDRMT-ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 393 FISLLYACSHSGLVEQGCEI 412
+ AC +G +I
Sbjct: 278 LAVMFKACRDFVRYREGSQI 297
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 192/460 (41%), Gaps = 49/460 (10%)
Query: 195 NAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV 254
N+ ++ R G++ A +F +M R++ SW M++ Y + G++ A +VF EMP++
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM 314
S++ MI + N G EL + N VS +++ +AG + + L+
Sbjct: 114 SYNAMITAMIKNKC---DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYA-- 168
Query: 315 EKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEA 374
E S +N L+ Y + G A VF+ M+V + +VS +S++ G G +A
Sbjct: 169 ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAV-KEVVSCSSMVHGYCKMGRIVDA 227
Query: 375 LQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVD 434
LF M E V IT+ +++ +G E G +F +M+ ++ M
Sbjct: 228 RSLFDRMTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFK 283
Query: 435 L------YGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD 488
Y +++H + +MP+ + + +L+ S G + A+ V + D
Sbjct: 284 ACRDFVRYREGSQIHG---LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
Query: 489 PNNSGDHVLLSNVYAVAGKWKDVVS---IRRTMTE--QSMVKTPGWSMIEINKVMYGFVA 543
+ W +++ R+ ++E + K PG M+ ++ GF
Sbjct: 341 ----------------SVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSG 384
Query: 544 GEKPNEVTE------EAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEK 597
+ ++ E E + M+ GY + H + ++E + S
Sbjct: 385 KGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSV 444
Query: 598 LAAAFGIAKLPKGKQL--RIVKNLRVCGDCHTVMKLISKF 635
L+A +A L +G Q+ R+VK + + D L+S +
Sbjct: 445 LSATASLADLIEGLQIHGRVVK-MNIVNDLSVQNSLVSMY 483
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 282/547 (51%), Gaps = 46/547 (8%)
Query: 41 KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXX 100
+ +H HL + + +F G + V +++ YA ++F+ P D +N ++
Sbjct: 72 EMVHAHLIKSPFWS-DVFVGTATVDMFVK-CNSVDYAAKVFERMPERDATTWNAMLSGFC 129
Query: 101 XXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHV 160
F +MR + + PDS + ++ + SLK +H R G D V
Sbjct: 130 QSGHTDKAFSLFREMRLNE-ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 161 FVGTTLISMYGECGDSESARRVFDEMP--EPNVVTWNAAVTACFRCGDVAGARGVF---- 214
V T IS YG+CGD +SA+ VF+ + + VV+WN+ A G+ A G++
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
Query: 215 --------------------------GRM---------PVRNLTSWNVMLAGYTKAGELG 239
GR+ +++ + N ++ Y+K+ +
Sbjct: 249 REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTC 308
Query: 240 LARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACA 299
AR +F M + VSW+ MI G A G D+A F +++ G +P+ V+L ++S C
Sbjct: 309 SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 300 QAGASEFGKILHGFMEKSGFLYISS-VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSW 358
+ G+ E GK + + G + + NALID YSKCG++ A+ +F N + +++V+W
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN-TPEKTVVTW 427
Query: 359 TSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
T++IAG A++G EAL+LF +M + +P+ ITF+++L AC+HSG +E+G E F MK
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 419 LYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAE 478
+Y I P ++HY CMVDL GR +L +A E I M P+A IW LL AC IH N+++AE
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 479 LVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVM 538
L ++P + +V ++N+YA AG W IR M ++++ K PG S+I++N
Sbjct: 548 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Query: 539 YGFVAGE 545
+ F GE
Sbjct: 608 HSFTVGE 614
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 185/413 (44%), Gaps = 47/413 (11%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P++F+F F K A + +H + F + VFVGT + M+ +C + A +V
Sbjct: 50 PNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKV 109
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS------------------ 224
F+ MPE + TWNA ++ + G A +F M + +T
Sbjct: 110 FERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSL 169
Query: 225 ---------------------WNVMLAGYTKAGELGLARRVFSEMPLKDD--VSWSTMIV 261
N ++ Y K G+L A+ VF + D VSW++M
Sbjct: 170 KLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFK 229
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLY 321
+ G AFG + +LRE +P+ + + ++C G+++H G
Sbjct: 230 AYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQ 289
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
N I YSK + A+L+F M+ R+ VSWT +I+G A G +EAL LFH M
Sbjct: 290 DIEAINTFISMYSKSEDTCSARLLFDIMT-SRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIE-PTIEHYGCMVDLYGRAA 440
+SG +PD +T +SL+ C G +E G I ++ ++YG + + ++D+Y +
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDAR-ADIYGCKRDNVMICNALIDMYSKCG 407
Query: 441 RLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD--PNN 491
+H+A + P V W T++ +++G A + +++ ++D PN+
Sbjct: 408 SIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNH 459
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 139/307 (45%), Gaps = 15/307 (4%)
Query: 182 VFDEMP----EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG------ 231
+F EM EPN T+ AC R DV V + W+ + G
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPF--WSDVFVGTATVDM 96
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
+ K + A +VF MP +D +W+ M+ G +G D+AF FRE+ I P+ V++
Sbjct: 97 FVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTV 156
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
++ + + + + + +H + G +V N I TY KCG++ A+LVF +
Sbjct: 157 MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDR 216
Query: 352 G-RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGC 410
G R++VSW S+ ++ G +A L+ M +PD TFI+L +C + + QG
Sbjct: 217 GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Query: 411 EIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSI 470
I S +L G + IE + +Y ++ A + + S V W ++ +
Sbjct: 277 LIHSHAIHL-GTDQDIEAINTFISMYSKSEDTCSA-RLLFDIMTSRTCVSWTVMISGYAE 334
Query: 471 HGNIELA 477
G+++ A
Sbjct: 335 KGDMDEA 341
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 9/235 (3%)
Query: 242 RRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQA 301
RR++ L +W+ I + ++ FRE+ R G PN + V ACA+
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 302 GASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSI 361
+++H + KS F V A +D + KC +V A VF M R +W ++
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP-ERDATTWNAM 124
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNL-- 419
++G GH ++A LF EM + + PD +T ++L+ + S E+ ++ M +
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGI 180
Query: 420 -YGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI-WRTLLGACSIHG 472
G++ + + YG+ L A + V+ W ++ A S+ G
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 279/589 (47%), Gaps = 77/589 (13%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDAL---------HYAL 78
+ +L C + QIH L TG+ + +++L A + L Y +
Sbjct: 16 IHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHV 75
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
F D F++N +I+ M + V D FS + LK +
Sbjct: 76 CSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLEN-GVSVDKFSLSLVLKACSRL 134
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
G +K G Q+H + G + +F+ LI +Y +CG +R++FD MP+ + V++N+ +
Sbjct: 135 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 194
Query: 199 TACFRCGDVAGARGVFGRMPV----------------------------------RNLTS 224
+CG + AR +F MP+ ++L S
Sbjct: 195 DGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS 254
Query: 225 WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNG-------SFDQ------ 271
WN M+ GY K G + A+ +F MP +D V+W+TMI G A G FDQ
Sbjct: 255 WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314
Query: 272 ------------------AFGFFRELLREG-IRPNEVSLTGVLSACAQAGASEFGKILHG 312
A F ++ +E + P++ +L VL A AQ G +H
Sbjct: 315 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHL 374
Query: 313 FMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGE 372
++ + F + ALID YSKCG++ A LVF + +SI W ++I GLA+HG GE
Sbjct: 375 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIGGLAIHGLGE 433
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCM 432
A + ++E ++PD ITF+ +L ACSHSGLV++G F M+ + IEP ++HYGCM
Sbjct: 434 SAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCM 493
Query: 433 VDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNS 492
VD+ R+ + A I +MP+ PN VIWRT L ACS H E ELV L N
Sbjct: 494 VDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNP 553
Query: 493 GDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGF 541
+VLLSN+YA G WKDV +R M E+ + K PG S IE++ ++ F
Sbjct: 554 SSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 180/588 (30%), Positives = 294/588 (50%), Gaps = 52/588 (8%)
Query: 23 LEPRWVSLLSKCSSLKP-TKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLF 81
L P+ + L S LK QIH + TG + + L+ I + + YA ++F
Sbjct: 15 LCPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGE-ISYARKVF 73
Query: 82 QHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSL 141
P +YN++I + QM + PDS +F +K +G L
Sbjct: 74 DELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEK-IQPDSSTFTMTIKACLSGLVL 132
Query: 142 KPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT-- 199
+ G + C+A G+ VFV ++++++Y +CG + A +F +M + +V+ W VT
Sbjct: 133 EKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGF 192
Query: 200 ---------------------------------ACFRCGDVAGARGVFGRM-----PVRN 221
A GD R V G + P+ N
Sbjct: 193 AQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPM-N 251
Query: 222 LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR 281
+ ++ Y K G + +A RVFS M K VSW ++I G A NG ++AF E+
Sbjct: 252 VVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQS 311
Query: 282 EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
G +P+ V+L GVL AC+Q G+ + G+++H ++ K L + AL+D YSKCG ++
Sbjct: 312 LGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTAT-ALMDMYSKCGALSS 370
Query: 342 AQLVFRNMSVGR-SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
++ +F + VGR +V W ++I+ +HG+G+E + LF +M ES + PD TF SLL A
Sbjct: 371 SREIFEH--VGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSAL 428
Query: 401 SHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI 460
SHSGLVEQG FS M N Y I+P+ +HY C++DL RA R+ +A + I + I
Sbjct: 429 SHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPI 488
Query: 461 WRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTE 520
W LL C H N+ + ++ ++ +++P++ G L+SN +A A KWK+V +R+ M
Sbjct: 489 WVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRN 548
Query: 521 QSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAE 568
+M K PG+S IE+N + F+ +++ H + +++ L+ E
Sbjct: 549 GAMEKVPGYSAIEVNGELRTFLM----EDLSHHEHYHMLQVLRNLKTE 592
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/596 (31%), Positives = 288/596 (48%), Gaps = 84/596 (14%)
Query: 30 LLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHF-PNPD 88
LL C+S KQ+ + L +L+ A+T + L A LF +F PNP+
Sbjct: 40 LLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPN 99
Query: 89 TFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLH 148
F+YNT+I + M RH V PD +F + +K + +K Q+H
Sbjct: 100 VFVYNTMISAVSSSKNECFGLYS--SMIRH-RVSPDRQTFLYLMKASSFLSEVK---QIH 153
Query: 149 CQAFRHG-FDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA------- 200
C G ++ +L+ Y E G+ A +VF MP P+V ++N +
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFS 213
Query: 201 ----------------------------CFRCGDVAGARGVFG----RMPV--RNLTSWN 226
C D+ +GV G R PV NL N
Sbjct: 214 LEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSN 273
Query: 227 VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGS-------FDQA------- 272
+L Y K E GLA+R F M KD SW+TM+VG G FDQ
Sbjct: 274 ALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVS 333
Query: 273 -----FGF---------FREL-----LREGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
FG+ REL + E ++P+ V++ ++S A G G+ +HG
Sbjct: 334 WNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGL 393
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEE 373
+ + + +++ALID Y KCG + A +VF+ + + + WTS+I GLA HG+G++
Sbjct: 394 VIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGNGQQ 452
Query: 374 ALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMV 433
ALQLF M+E GV P+ +T +++L ACSHSGLVE+G +F+ MK+ +G +P EHYG +V
Sbjct: 453 ALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLV 512
Query: 434 DLYGRAARLHKAYEFIC-QMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNS 492
DL RA R+ +A + + +MP+ P+ +W ++L AC +IE AEL L +++P
Sbjct: 513 DLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKE 572
Query: 493 GDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPN 548
G +VLLSN+YA G+W R M + + KT G+S + + ++ FVA EK N
Sbjct: 573 GGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQN 628
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 274/594 (46%), Gaps = 82/594 (13%)
Query: 42 QIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXX 101
Q+H + V + KL+ T D AL +F + F YN L+
Sbjct: 43 QLHARIVVFSIKPDNFLASKLI--SFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 102 XXXXXXXXHPFIQM-----RRHPTVFPDSFSFAFALKGVANGGSLKPGT---QLHCQAFR 153
F+ PDS S + LK ++ G+ Q+H R
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 154 HGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT-------------- 199
GFD+ VFVG +I+ Y +C + ESAR+VFDEM E +VV+WN+ ++
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 200 ----------------------ACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYT 233
AC + D+ V +M +L+ N ++ Y
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYA 280
Query: 234 KAGELGLARRVFSEMPLKDDV-------------------------------SWSTMIVG 262
K G L AR +F EM KD V +W+ MI G
Sbjct: 281 KCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISG 340
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
L N ++ FRE++R G RPN V+L+ +L + + + GK +H F ++G
Sbjct: 341 LMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN 400
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
V ++ID Y+K G + AQ VF N RS+++WT+II A+HG + A LF +M+
Sbjct: 401 IYVTTSIIDNYAKLGFLLGAQRVFDNCK-DRSLIAWTAIITAYAVHGDSDSACSLFDQMQ 459
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
G +PD +T ++L A +HSG + IF M Y IEP +EHY CMV + RA +L
Sbjct: 460 CLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKL 519
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVY 502
A EFI +MPI P A +W LL S+ G++E+A RL EM+P N+G++ +++N+Y
Sbjct: 520 SDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLY 579
Query: 503 AVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHD 556
AG+W++ +R M + K PG S IE K + F+A + E ++E ++
Sbjct: 580 TQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYE 633
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/576 (29%), Positives = 281/576 (48%), Gaps = 68/576 (11%)
Query: 23 LEPRWVSLLSKCSSLKPTKQIHTHLYVTGL-HTHPLFFGKLLLHCAVTISDALHYALRLF 81
L+ + L +C L+ KQ+H L V H P+ + L + + Y R+
Sbjct: 2 LDSKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRIL 61
Query: 82 QHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSL 141
+ F D+F + L+R +I M + + P S + L+ ++
Sbjct: 62 KGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMH-NSGIPPSSHAVTSVLRACGKMENM 120
Query: 142 KPGTQLHCQAFRHGFDTHVFVGTTLISMYG------------------------------ 171
G +H QA ++G V+V T L+ +Y
Sbjct: 121 VDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGY 180
Query: 172 -ECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLA 230
E G+ + ARRVFD++PE + V+WN +++ + GD+ A +F MP+++ SWN+++
Sbjct: 181 LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIG 240
Query: 231 GYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA-------------------------- 264
GY E+ LAR F MP K+ VSW TMI G
Sbjct: 241 GYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAM 300
Query: 265 -----HNGSFDQAFGFFRELLREG--IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS 317
NG A F ++L I+P+E++L+ V+SA +Q G + FG + ++ +
Sbjct: 301 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEH 360
Query: 318 GFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQL 377
G ++ +LID Y K G+ A A +F N++ + VS++++I G ++G EA L
Sbjct: 361 GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSL 419
Query: 378 FHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYG 437
F M E + P+ +TF LL A SHSGLV++G + F+ MK+ + +EP+ +HYG MVD+ G
Sbjct: 420 FTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLG 478
Query: 438 RAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVL 497
RA RL +AYE I MP+ PNA +W LL A +H N+E E+ + +++ + +G
Sbjct: 479 RAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSH 538
Query: 498 LSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIE 533
L+ +Y+ G+W D ++R ++ E+ + KT G S +E
Sbjct: 539 LAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/512 (32%), Positives = 269/512 (52%), Gaps = 37/512 (7%)
Query: 23 LEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQ 82
+E + + LL ++ +IH HL LH L + C ++S++ YA R+F
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICG-SLSNS-DYANRVFS 60
Query: 83 HFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLK 142
H NP+ ++N +I+ F M+ ++ D +++A LK ++ L+
Sbjct: 61 HIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRG-IWADEYTYAPLLKSCSSLSDLR 119
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACF 202
G +H + R GF + ++ +Y G A++VFDEM E
Sbjct: 120 FGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE-------------- 165
Query: 203 RCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
RN+ WN+M+ G+ +G++ +F +M + VSW++MI
Sbjct: 166 -----------------RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISS 208
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG-FLY 321
L+ G +A F E++ +G P+E ++ VL A G + GK +H E SG F
Sbjct: 209 LSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKD 268
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
+V NAL+D Y K G++ A +FR M R++VSW ++I+G A++G GE + LF M
Sbjct: 269 FITVGNALVDFYCKSGDLEAATAIFRKMQR-RNVVSWNTLISGSAVNGKGEFGIDLFDAM 327
Query: 382 -EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAA 440
EE V P+ TF+ +L CS++G VE+G E+F M + +E EHYG MVDL R+
Sbjct: 328 IEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSG 387
Query: 441 RLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSN 500
R+ +A++F+ MP++ NA +W +LL AC HG+++LAE+ L +++P NSG++VLLSN
Sbjct: 388 RITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSN 447
Query: 501 VYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMI 532
+YA G+W+DV +R M + + K+ G S I
Sbjct: 448 LYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 282/537 (52%), Gaps = 24/537 (4%)
Query: 41 KQIHTHLYVTGLHTHPLFFGKLL-LHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXX 99
KQ H V G+ + LL +C V + + YA +F D +N +I
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGL---IEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 100 XXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTH 159
+ Q+ R + D + A + A +LK G ++ C RH F++
Sbjct: 351 VQQGLVEDAIY-MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 160 VFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV 219
+ + +T++ MY +CG A++VFD E +++ WN + A G A +F M +
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 220 R----NLTSWNVMLAGYTKAGELGLARRVFSEMP----LKDDVSWSTMIVGLAHNGSFDQ 271
N+ +WN+++ + G++ A+ +F +M + + +SW+TM+ G+ NG ++
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 272 AFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS-GFLYISSVNNALI 330
A F R++ G+RPN S+T LSACA + G+ +HG++ ++ + S+ +L+
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 331 DTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDG 390
D Y+KCG++ A+ VF + +S ++I+ A++G+ +EA+ L+ +E G++PD
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLS-NAMISAYALYGNLKEAIALYRSLEGVGLKPDN 648
Query: 391 ITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFIC 450
IT ++L AC+H+G + Q EIF+ + + ++P +EHYG MVDL A KA I
Sbjct: 649 ITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIE 708
Query: 451 QMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKD 510
+MP P+A + ++L+ +C+ EL + + +L E +P NSG++V +SN YAV G W +
Sbjct: 709 EMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDE 768
Query: 511 VVSIRRTMTEQSMVKTPGWSMIEIN--KVMYGFVAGEKPNEVTEEAHDKLREIMLRL 565
VV +R M + + K PG S I+I + ++ FVA +K H ++ EI + L
Sbjct: 769 VVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDK-------THTRINEIQMML 818
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 138/559 (24%), Positives = 239/559 (42%), Gaps = 82/559 (14%)
Query: 37 LKPTKQIHTHLYVTG--LHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNT 94
L KQIH + G + KL++ A DAL A LF + F +
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKC--DALEIAEVLFSKLRVRNVFSWAA 143
Query: 95 LIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRH 154
+I F++M + +FPD+F K + G +H +
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENE-IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS 202
Query: 155 GFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVF 214
G + VFV ++L MYG+CG + A +VFDE+P+ N V WNA + + G A +F
Sbjct: 203 GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLF 262
Query: 215 GRM------PVRNLTSW-----------------------------NV----MLAGYTKA 235
M P R S N+ +L Y K
Sbjct: 263 SDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKV 322
Query: 236 GELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
G + A VF M KD V+W+ +I G G + A + + E ++ + V+L ++
Sbjct: 323 GLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLM 382
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI 355
SA A+ + GK + + + F + + ++D Y+KCG++ A+ VF + +V + +
Sbjct: 383 SAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF-DSTVEKDL 441
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
+ W +++A A G EAL+LF+ M+ GV P+ IT+ ++ + +G V++ ++F +
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 416 MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGAC---- 468
M++ GI P + + M++ + +A F+ +M + PNA L AC
Sbjct: 502 MQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLA 560
Query: 469 ------SIHG----NIELAELVKARLAEMD------PNNSGDHVL---------LSN--- 500
+IHG N++ + LV + +D N + V LSN
Sbjct: 561 SLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMI 620
Query: 501 -VYAVAGKWKDVVSIRRTM 518
YA+ G K+ +++ R++
Sbjct: 621 SAYALYGNLKEAIALYRSL 639
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 172/397 (43%), Gaps = 50/397 (12%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHG--FDTHVFVGTTLISM 169
F +R P ++ + L+G L G Q+H + ++G + + ++ T L+
Sbjct: 63 FRNLRIGPEIYGE------ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIF 116
Query: 170 YGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGA------------------- 210
Y +C E A +F ++ NV +W A + R G GA
Sbjct: 117 YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176
Query: 211 ----------------RGVFGRMPVRNLTSWNVMLAG----YTKAGELGLARRVFSEMPL 250
RGV G + L + + Y K G L A +VF E+P
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 251 KDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKIL 310
++ V+W+ ++VG NG ++A F ++ ++G+ P V+++ LSA A G E GK
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 311 HGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH 370
H +G + + +L++ Y K G + A++VF M + +V+W II+G G
Sbjct: 297 HAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM-FEKDVVTWNLIISGYVQQGL 355
Query: 371 GEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYG 430
E+A+ + M ++ D +T +L+ A + + ++ G E+ + E I
Sbjct: 356 VEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR-HSFESDIVLAS 414
Query: 431 CMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA 467
++D+Y + + A + + + + ++W TLL A
Sbjct: 415 TVMDMYAKCGSIVDAKK-VFDSTVEKDLILWNTLLAA 450
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 162/518 (31%), Positives = 266/518 (51%), Gaps = 18/518 (3%)
Query: 71 SDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAF 130
S L A LFQ P + +NT+I F +M V S+
Sbjct: 122 SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV-----SWNS 176
Query: 131 ALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPN 190
+K + G + L + R V T ++ + G + ARR+FD MPE N
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERN 232
Query: 191 VVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPL 250
+++WNA +T + + A +F MP R+ SWN M+ G+ + E+ A +F MP
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPE 292
Query: 251 KDDVSWSTMIVGLAHNGSFDQAFGFFRELLREG-IRPNEVSLTGVLSACAQAGASEFGKI 309
K+ +SW+TMI G N ++A F ++LR+G ++PN + +LSAC+ G+
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQ 352
Query: 310 LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRN-MSVGRSIVSWTSIIAGLAMH 368
+H + KS V +AL++ YSK G + A+ +F N + R ++SW S+IA A H
Sbjct: 353 IHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHH 412
Query: 369 GHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEH 428
GHG+EA++++++M + G +P +T+++LL+ACSH+GLVE+G E F + + EH
Sbjct: 413 GHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEH 472
Query: 429 YGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD 488
Y C+VDL GRA RL FI + + +L AC++H + +A+ V ++ E
Sbjct: 473 YTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG 532
Query: 489 PNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPN 548
+++G +VL+SN+YA GK ++ +R M E+ + K PG S +++ K + FV G+K +
Sbjct: 533 SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSH 592
Query: 549 EVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEE 586
E L ++ ++R + V D EE E
Sbjct: 593 PQFEALDSILSDLRNKMRKN-------KNVTSDAEEAE 623
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 28/323 (8%)
Query: 166 LISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR-NLTS 224
LI + G AR++FD +PE +VVTW +T + GD+ AR +F R+ R N+ +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 225 WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
W M++GY ++ +L +A +F EMP ++ VSW+TMI G A +G D+A F E+ I
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
VS ++ A Q G + L M + + + A++D +K G V A+
Sbjct: 172 ----VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWT----AMVDGLAKNGKVDEARR 223
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
+F M R+I+SW ++I G A + +EA QLF M E D ++ +++ +
Sbjct: 224 LFDCMP-ERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNR 278
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM----PISPNAVI 460
+ + C +F +M E + + M+ Y +A +M + PN
Sbjct: 279 EMNKACGLFDRMP-----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGT 333
Query: 461 WRTLLGACSIHGNIELAELVKAR 483
+ ++L ACS +LA LV+ +
Sbjct: 334 YVSILSACS-----DLAGLVEGQ 351
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 187/431 (43%), Gaps = 56/431 (12%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D ++ + G G ++ +L R +V T ++S Y A +F
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFD---RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 184 DEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARR 243
EMPE NVV+WN + + G + A +F MP RN+ SWN M+ + G + A
Sbjct: 133 QEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMN 192
Query: 244 VFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGA 303
+F MP +D VSW+ M+ GLA NG D+A F + I +S +++ AQ
Sbjct: 193 LFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNR 248
Query: 304 SEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIA 363
+ L M + F + N +I + + + A +F M ++++SWT++I
Sbjct: 249 IDEADQLFQVMPERDF----ASWNTMITGFIRNREMNKACGLFDRMP-EKNVISWTTMIT 303
Query: 364 GLAMHGHGEEALQLFHEMEESG-VRPDGITFISLLYACSH-SGLVE-------------Q 408
G + EEAL +F +M G V+P+ T++S+L ACS +GLVE Q
Sbjct: 304 GYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQ 363
Query: 409 GCEIF-SKMKNLYG-----------------IEPTIEHYGCMVDLYGRAARLHKAYEFIC 450
EI S + N+Y + + + M+ +Y +A E
Sbjct: 364 KNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYN 423
Query: 451 QMP---ISPNAVIWRTLLGACSIHGNIE-----LAELVKARLAEMDPNNSGDHVLLSNVY 502
QM P+AV + LL ACS G +E +LV+ E P + L ++
Sbjct: 424 QMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR---DESLPLREEHYTCLVDLC 480
Query: 503 AVAGKWKDVVS 513
AG+ KDV +
Sbjct: 481 GRAGRLKDVTN 491
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 280/534 (52%), Gaps = 44/534 (8%)
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
R+F + ++NT+I F++ + D ++ A V+
Sbjct: 272 RVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
++ G Q H ++ + + + +L+ MY CG + VF M E +VV+WN +
Sbjct: 332 QQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMI 391
Query: 199 TACFRCG-DVAGARGVF-----------------------------GRMPVRNLTSWNVM 228
+A + G D G V+ G+ L +
Sbjct: 392 SAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ 451
Query: 229 LAG--------YTKAGELGLARRVF--SEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRE 278
G Y+K+G + +++++F S +D +W++MI G NG ++ F FR+
Sbjct: 452 FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRK 511
Query: 279 LLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGN 338
+L + IRPN V++ +L AC+Q G+ + GK LHGF + V +AL+D YSK G
Sbjct: 512 MLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGA 571
Query: 339 VAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLY 398
+ A+ +F + + R+ V++T++I G HG GE A+ LF M+ESG++PD ITF+++L
Sbjct: 572 IKYAEDMF-SQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLS 630
Query: 399 ACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPN- 457
ACS+SGL+++G +IF +M+ +Y I+P+ EHY C+ D+ GR R+++AYEF+ + N
Sbjct: 631 ACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNI 690
Query: 458 AVIWRTLLGACSIHGNIELAELVKARLAEMD--PNNSGDHVLLSNVYAVAGKWKDVVSIR 515
A +W +LLG+C +HG +ELAE V RLA+ D N SG VLLSN+YA KWK V +R
Sbjct: 691 AELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVR 750
Query: 516 RTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEA 569
R M E+ + K G S IEI + FV+ ++ + + E +D + + +R ++
Sbjct: 751 RGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDS 804
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 215/506 (42%), Gaps = 64/506 (12%)
Query: 27 WVSLLSKCS---SLKPTKQIHTHLYVTGLHTHPLFFGKLL---LHCAVTISDALHYAL-- 78
+ S L C+ +LK K +H HL ++ + L+ + C + D Y +
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC-LNAPDCFEYDVVR 168
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPF-IQMRRHPTVFPDSFSFAFALKGVAN 137
++F + + +NTLI F I MR V P SF V+
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME--VKPSPVSFVNVFPAVSI 226
Query: 138 GGSLKPGTQLHCQAFRHG--FDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN 195
S+K + + G + +FV ++ ISMY E GD ES+RRVFD E N+ WN
Sbjct: 227 SRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 196 A------------------------------AVTACFRCGDVAGARGV------------ 213
VT V+ + V
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK 346
Query: 214 -FGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQA 272
F +P+ + S VM Y++ G + + VF M +D VSW+TMI NG D+
Sbjct: 347 NFRELPIVIVNSLMVM---YSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 273 FGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDT 332
E+ ++G + + +++T +LSA + E GK H F+ + G + +N+ LID
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF-EGMNSYLIDM 462
Query: 333 YSKCGNVAMAQLVFRNMSVG-RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGI 391
YSK G + ++Q +F R +W S+I+G +GH E+ +F +M E +RP+ +
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAV 522
Query: 392 TFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQ 451
T S+L ACS G V+ G ++ Y ++ + +VD+Y +A + A + Q
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Query: 452 MPISPNAVIWRTLLGACSIHGNIELA 477
N+V + T++ HG E A
Sbjct: 582 TK-ERNSVTYTTMILGYGQHGMGERA 606
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 206/485 (42%), Gaps = 84/485 (17%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRH-PTVFPDSFSFAFALKGV 135
A +LF P P T ++NT+I + +M++ P D+++++ LK
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 136 ANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMY------GECGDSESARRVFDEMPEP 189
A +LK G +HC R ++ V +L++MY +C + + R+VFD M
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 190 NVVTWNAAVTACFRCGDVAGARGVFG---RMPV-----------------RNLTSWNVM- 228
NVV WN ++ + G A A FG RM V R++ NV
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 229 --------------------LAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGS 268
++ Y + G++ +RRVF ++ W+TMI N
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 269 FDQAFGFFRELL-REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN 327
++ F E + + I +EV+ SA + E G+ HGF+ K+ + N
Sbjct: 298 LVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVN 357
Query: 328 ALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVR 387
+L+ YS+CG+V + VF +M R +VSW ++I+ +G +E L L +EM++ G +
Sbjct: 358 SLMVMYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 388 PDGITFISLLYACS-----------HSGLVEQGCE---IFSKMKNLYGIEPTIE------ 427
D IT +LL A S H+ L+ QG + + S + ++Y I
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLF 476
Query: 428 -----------HYGCMVDLYGRAARLHKAYEFICQM---PISPNAVIWRTLLGACSIHGN 473
+ M+ Y + K + +M I PNAV ++L ACS G+
Sbjct: 477 EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGS 536
Query: 474 IELAE 478
++L +
Sbjct: 537 VDLGK 541
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 25/254 (9%)
Query: 229 LAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN- 287
L+ + G LAR++F +P V W+T+I+G N +A F+ + + N
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 288 -EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA------ 340
+ + L ACA+ + GK +H + + V+N+L++ Y C N
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 341 MAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
+ + VF NM +++V+W ++I+ G EA + F M V+P ++F+++ A
Sbjct: 166 VVRKVFDNMR-RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 401 SHSGLVEQGCEIFSKM--------KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM 452
S S +++ + M K+L+ + I Y + D+ ++ +
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI--------ESSRRVFDS 276
Query: 453 PISPNAVIWRTLLG 466
+ N +W T++G
Sbjct: 277 CVERNIEVWNTMIG 290
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/472 (34%), Positives = 246/472 (52%), Gaps = 41/472 (8%)
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE------------------ 188
+H A G+D + VG LI+ Y +CG S S R VFD M
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 189 -----------------PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSW----NV 227
PN VT+ +A+ AC + + + + + S +
Sbjct: 237 HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
++ Y+K G + A +F D+VS + ++VGLA NGS ++A FF +L+ G+ +
Sbjct: 297 LMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID 356
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR 347
++ VL + GK LH + K F + VNN LI+ YSKCG++ +Q VFR
Sbjct: 357 ANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFR 416
Query: 348 NMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVE 407
M R+ VSW S+IA A HGHG AL+L+ EM V+P +TF+SLL+ACSH GL++
Sbjct: 417 RMP-KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLID 475
Query: 408 QGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA 467
+G E+ ++MK ++GIEP EHY C++D+ GRA L +A FI +P+ P+ IW+ LLGA
Sbjct: 476 KGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGA 535
Query: 468 CSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTP 527
CS HG+ E+ E +L + P++S H+L++N+Y+ GKWK+ + M + K
Sbjct: 536 CSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKET 595
Query: 528 GWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVL 579
G S IEI + FV +K + E +D L + + + GY P R +L
Sbjct: 596 GISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSG-LFPVMVDEGYRPDKRFIL 646
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 119/228 (52%), Gaps = 4/228 (1%)
Query: 220 RN-LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRE 278
RN L WN +L+ Y K G+L A ++F EMP++D +S + + G N + F +
Sbjct: 87 RNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKR 146
Query: 279 LLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGN 338
+L G + +LT VLS C K++H SG+ SV N LI +Y KCG
Sbjct: 147 MLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205
Query: 339 VAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLY 398
+ VF MS R++++ T++I+GL + E+ L+LF M V P+ +T++S L
Sbjct: 206 SVSGRGVFDGMS-HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 399 ACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAY 446
ACS S + +G +I + + YGIE + ++D+Y + + A+
Sbjct: 265 ACSGSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDAW 311
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 130/317 (41%), Gaps = 45/317 (14%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYG 171
F MRR V P+S ++ AL + + G Q+H +++G ++ + + + L+ MY
Sbjct: 244 FSLMRR-GLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYS 302
Query: 172 ECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM-------------- 217
+CG E A +F+ E + V+ + + G A F RM
Sbjct: 303 KCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSA 362
Query: 218 --------------------PVRNLTSWNV-----MLAGYTKAGELGLARRVFSEMPLKD 252
++ S N ++ Y+K G+L ++ VF MP ++
Sbjct: 363 VLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRN 422
Query: 253 DVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK-ILH 311
VSW++MI A +G A + E+ ++P +V+ +L AC+ G + G+ +L+
Sbjct: 423 YVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLN 482
Query: 312 GFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHG 371
E G + +ID + G + A+ ++ + W +++ + HG
Sbjct: 483 EMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDT 542
Query: 372 E----EALQLFHEMEES 384
E A QLF +S
Sbjct: 543 EVGEYAAEQLFQTAPDS 559
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/586 (30%), Positives = 287/586 (48%), Gaps = 48/586 (8%)
Query: 28 VSLLSKC---SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHF 84
VS L+ C S K K+IH + + H+ L+ L+ T + A R+ +
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI-AMYTRCGKMPQAERILRQM 346
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQM--RRHPTVFPDSFSFAFALKGVANGGSLK 142
N D +N+LI+ F M H + D S + +L
Sbjct: 347 NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS---DEVSMTSIIAASGRLSNLL 403
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA-- 200
G +LH +HG+D+++ VG TLI MY +C + R F M + ++++W +
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 201 ----------CFR-------------CGDVAGARGVFGRMPVRNLTSWNVMLAG------ 231
FR G + A V M + +++ G
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVI 523
Query: 232 -------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
Y K +G A RVF + KD VSW++MI A NG+ +A FR ++ G+
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
+ V+L +LSA A A G+ +H ++ + GF S+ A++D Y+ CG++ A+
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 643
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
VF + + ++ +TS+I MHG G+ A++LF +M V PD I+F++LLYACSH+G
Sbjct: 644 VFDRIE-RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAG 702
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
L+++G M++ Y +EP EHY C+VD+ GRA + +A+EF+ M P A +W L
Sbjct: 703 LLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCAL 762
Query: 465 LGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMV 524
L AC H E+ E+ RL E++P N G+ VL+SNV+A G+W DV +R M M
Sbjct: 763 LAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGME 822
Query: 525 KTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAG 570
K PG S IE++ ++ F A +K + ++E ++KL E+ +L E G
Sbjct: 823 KHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREKG 868
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 215/493 (43%), Gaps = 59/493 (11%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFF--GKLLLHCAVTISDALHYALRLFQHFP 85
+ L K ++ +Q+H+ ++ T + L F GKL+ S L A ++F P
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKT-FPSFELDFLAGKLVFMYGKCGS--LDDAEKVFDEMP 143
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGT 145
+ F +NT+I + MR S SF LK A ++ G+
Sbjct: 144 DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS-SFPALLKACAKLRDIRSGS 202
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFD--------------------- 184
+LH + G+ + F+ L+SMY + D +ARR+FD
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 185 -----------EM----PEPNVVTWNAAVTAC-----FRCGDVAGARGVFGRMPVRNLTS 224
EM P PN T +A+TAC + G A + L
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 225 WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
N ++A YT+ G++ A R+ +M D V+W+++I G N + +A FF +++ G
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 382
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
+ +EVS+T +++A + G LH ++ K G+ V N LID YSKC
Sbjct: 383 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 442
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS--H 402
F M + ++SWT++IAG A + EAL+LF ++ + + D + S+L A S
Sbjct: 443 AFLRMH-DKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLK 501
Query: 403 SGLV--EQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI 460
S L+ E C I K G+ T+ +VD+YG+ + A + + V
Sbjct: 502 SMLIVKEIHCHILRK-----GLLDTVIQNE-LVDVYGKCRNMGYATRVFESIK-GKDVVS 554
Query: 461 WRTLLGACSIHGN 473
W +++ + +++GN
Sbjct: 555 WTSMISSSALNGN 567
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 163/358 (45%), Gaps = 52/358 (14%)
Query: 127 SFAFALKGVANGGSLKPGTQLHCQAFRH--GFDTHVFVGTTLISMYGECGDSESARRVFD 184
+FA+ L+ ++ G QLH + F+ F+ F+ L+ MYG+CG + A +VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 185 EMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSW--------------- 225
EMP+ WN + A G+ A A ++ M V L+S+
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 226 --------------------NVMLAGYTKAGELGLARRVFSEMPLKDD-VSWSTMIVGLA 264
N +++ Y K +L ARR+F K D V W++++ +
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGF----L 320
+G + FRE+ G PN ++ L+AC ++ GK +H + KS L
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 321 YISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHE 380
Y+ NALI Y++CG + A+ + R M+ +V+W S+I G + +EAL+ F +
Sbjct: 321 YVC---NALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 381 MEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGR 438
M +G + D ++ S++ A + G E+ + + +G + ++ ++D+Y +
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK-HGWDSNLQVGNTLIDMYSK 433
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 136/300 (45%), Gaps = 10/300 (3%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y K G L A +VF EMP + +W+TMI NG A + + EG+ S
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
+L ACA+ G LH + K G+ + NAL+ Y+K +++ A+ +F
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
V W SI++ + G E L+LF EM +G P+ T +S L AC + G E
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 412 IFSKMKNLYGIEPTIEHYGC--MVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACS 469
I + + L + E Y C ++ +Y R ++ +A + QM + + V W +L+
Sbjct: 306 IHASV--LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG-- 360
Query: 470 IHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGW 529
N+ E ++ + + D V ++++ A +G+ ++++ M + V GW
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLA---GMELHAYVIKHGW 417
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 252/514 (49%), Gaps = 72/514 (14%)
Query: 26 RWVSLLSKCSSLKPTKQIHTHLYVTGL--HTHPLFFGKLLLHCAVTISDALHYALRLFQH 83
R ++L+SKC SL+ KQIH + GL HT+PL LLH + T+ L YAL + +
Sbjct: 11 RCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPL---SKLLHLSSTV--CLSYALSILRQ 65
Query: 84 FPNPDTFMYNTLIRXXXXXXXXXXXXHPF-----IQMRRHPTVFPDSFSFAFALKGVANG 138
PNP F+YNTLI F I R V P+ F++
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYP--------- 116
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
SL + Q RHG H V L EP V + V
Sbjct: 117 -SLFKASGFDAQWHRHGRALHAHVLKFL---------------------EP--VNHDRFV 152
Query: 199 TACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWST 258
A ++ Y G+L AR +F + D +W+T
Sbjct: 153 QA--------------------------ALVGFYANCGKLREARSLFERIREPDLATWNT 186
Query: 259 MIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG 318
++ A++ D +R +RPNE+SL ++ +CA G G H ++ K+
Sbjct: 187 LLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNN 246
Query: 319 FLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLF 378
V +LID YSKCG ++ A+ VF MS R + + ++I GLA+HG G+E ++L+
Sbjct: 247 LTLNQFVGTSLIDLYSKCGCLSFARKVFDEMS-QRDVSCYNAMIRGLAVHGFGQEGIELY 305
Query: 379 HEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGR 438
+ G+ PD TF+ + ACSHSGLV++G +IF+ MK +YGIEP +EHYGC+VDL GR
Sbjct: 306 KSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGR 365
Query: 439 AARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLL 498
+ RL +A E I +MP+ PNA +WR+ LG+ HG+ E E+ L ++ NSG++VLL
Sbjct: 366 SGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLL 425
Query: 499 SNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMI 532
SN+YA +W DV R M + + K+PG S +
Sbjct: 426 SNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 268/548 (48%), Gaps = 44/548 (8%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A LF P+ D + +I F +M + T P+ F+ + LK
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS-PNEFTLSSVLKSCR 122
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDS-ESARRVFDEMPEPNVVTWN 195
N L G +H + G + ++V +++MY C + E+A +F ++ N VTW
Sbjct: 123 NMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWT 182
Query: 196 AAVTACFRCGDVAGARGVFGRM--------------PVR--------------------- 220
+T GD G ++ +M VR
Sbjct: 183 TLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKR 242
Query: 221 ----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
NL N +L Y + G L A+ F EM KD ++W+T+I L + S +A F
Sbjct: 243 GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMF 301
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
+ +G PN + T +++ACA A G+ LHG + + GF + NALID Y+KC
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKC 361
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
GN+ +Q VF + R++VSWTS++ G HG+G EA++LF +M SG+RPD I F+++
Sbjct: 362 GNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAV 421
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISP 456
L AC H+GLVE+G + F+ M++ YGI P + Y C+VDL GRA ++ +AYE + +MP P
Sbjct: 422 LSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKP 481
Query: 457 NAVIWRTLLGACSIHG-NIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIR 515
+ W +LGAC H N ++ L ++ E+ P G +V+LS +YA GKW D +R
Sbjct: 482 DESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVR 541
Query: 516 RTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQV 575
+ M K G S I + ++ F +K + L ++ R EAGY P++
Sbjct: 542 KMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETR-EAGYVPEL 600
Query: 576 RGVLHDIE 583
+++D E
Sbjct: 601 DSLVNDQE 608
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 126/241 (52%), Gaps = 8/241 (3%)
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
++ Y + G + AR +F EMP +D V+W+ MI G A + +A+ F E++++G PN
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG-NVAMAQLVF 346
E +L+ VL +C +G ++HG + K G V+NA+++ Y+ C + A L+F
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM--EESGVRPDGITFISLLYACSHSG 404
R++ V ++ V+WT++I G G G L+++ +M E + V P IT + A +
Sbjct: 171 RDIKV-KNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRASASID 227
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
V G +I + + G + + ++DLY R L +A + +M + + W TL
Sbjct: 228 SVTTGKQIHASVIK-RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTL 285
Query: 465 L 465
+
Sbjct: 286 I 286
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 154/387 (39%), Gaps = 49/387 (12%)
Query: 29 SLLSKCSSLKPTKQ---IHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFP 85
S+L C ++K +H + G+ L+ +++ T S + A +F+
Sbjct: 116 SVLKSCRNMKVLAYGALVHGVVVKLGMEG-SLYVDNAMMNMYATCSVTMEAACLIFRDIK 174
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMR-RHPTVFPDSFSFAFALKGVANGGSLKPG 144
+ + TLI + QM + V P + A++ A+ S+ G
Sbjct: 175 VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP--YCITIAVRASASIDSVTTG 232
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT----- 199
Q+H + GF +++ V +++ +Y CG A+ F EM + +++TWN ++
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS 292
Query: 200 ----------------------------------ACFRCGDVAGARGVFGRMPVRNLTSW 225
A CG R +F R +N+
Sbjct: 293 DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR-IFRRGFNKNVELA 351
Query: 226 NVMLAGYTKAGELGLARRVFSEM-PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
N ++ Y K G + ++RVF E+ ++ VSW++M++G +G +A F +++ GI
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKS-GFLYISSVNNALIDTYSKCGNVAMAQ 343
RP+ + VLSAC AG E G ME G + N ++D + G + A
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAY 471
Query: 344 LVFRNMSVGRSIVSWTSIIAGLAMHGH 370
+ M +W +I+ H H
Sbjct: 472 ELVERMPFKPDESTWGAILGACKAHKH 498
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 271/562 (48%), Gaps = 56/562 (9%)
Query: 19 MSNTLEPRWVSLLSKCSSLKPT---KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALH 75
+ + L P+ L++ S + T +IH ++ TGL KLL +V +
Sbjct: 20 LESLLSPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL---DIR 76
Query: 76 YALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGV 135
YA +F+H N + FM+NT+IR F Q+R D FSF LK
Sbjct: 77 YASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTL-DRFSFITTLKSC 135
Query: 136 ANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEP------ 189
+ + G LH A R GF + LI Y CG AR+VFDEMP+
Sbjct: 136 SRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTF 195
Query: 190 ------------------------------NVVTWNAAVTACFRCGDVAGARGVFGRMPV 219
NV T + ++A GD++GA + +
Sbjct: 196 STLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAH-VLCI 254
Query: 220 R-----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFG 274
+ +L ++ Y K G + ARR+F KD V+W+ MI A G ++
Sbjct: 255 KIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVW 314
Query: 275 FFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYS 334
R++ E ++PN + G+LS+CA + A+ G+ + +E+ + + AL+D Y+
Sbjct: 315 LLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYA 374
Query: 335 KCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG--VRPDGIT 392
K G + A +F M + + SWT++I+G HG EA+ LF++MEE VRP+ IT
Sbjct: 375 KVGLLEKAVEIFNRMK-DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEIT 433
Query: 393 FISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM 452
F+ +L ACSH GLV +G F +M Y P +EHYGC+VDL GRA +L +AYE I +
Sbjct: 434 FLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNL 493
Query: 453 PISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVV 512
PI+ ++ WR LL AC ++GN +L E V RLAEM + D +LL+ +AVAG +
Sbjct: 494 PITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEK-- 551
Query: 513 SIRRTMTEQSMVKTPGWSMIEI 534
S+ + + K G+S IEI
Sbjct: 552 SLDNELNKGR--KEAGYSAIEI 571
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/548 (29%), Positives = 264/548 (48%), Gaps = 43/548 (7%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A R+F P D ++++I +M P+ + F +LK +
Sbjct: 222 ASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
+ G+Q+H + + G +L MY CG SARRVFD++ P+ +WN
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341
Query: 197 AVTACFRCGDVAGARGVFGRMP-------------------------------------- 218
+ G A VF +M
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401
Query: 219 -VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLK-DDVSWSTMIVGLAHNGSFDQAFGFF 276
+ +LT N +L YT +L +F + D VSW+T++ + + F
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
+ +L P+ +++ +L C + + + G +H + K+G + N LID Y+KC
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKC 521
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
G++ A+ +F +M R +VSW+++I G A G GEEAL LF EM+ +G+ P+ +TF+ +
Sbjct: 522 GSLGQARRIFDSMD-NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGV 580
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISP 456
L ACSH GLVE+G ++++ M+ +GI PT EH C+VDL RA RL++A FI +M + P
Sbjct: 581 LTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEP 640
Query: 457 NAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRR 516
+ V+W+TLL AC GN+ LA+ + ++DP NS HVLL +++A +G W++ +R
Sbjct: 641 DVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRS 700
Query: 517 TMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVR 576
+M + + K PG S IEI ++ F A + + ++ + L I ++ E PQ +
Sbjct: 701 SMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDECN--PQHK 758
Query: 577 GVLHDIEE 584
L I E
Sbjct: 759 KRLQFIHE 766
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/519 (25%), Positives = 221/519 (42%), Gaps = 68/519 (13%)
Query: 27 WVSLLSKCSS---LKPTKQIHTHL------YVTGLHTHPL-FFGKLLLHCAVTISDALHY 76
++SL+ CSS L ++IH H+ Y T L+ H L +GK C +L
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGK----CG-----SLRD 120
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A +F P + Y ++I +++M + V PD F+F +K A
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV-PDQFAFGSIIKACA 179
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
+ + G QLH Q + +H+ LI+MY A RVF +P ++++W++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239
Query: 197 AVTACFRCGDVAGARG----------------VFGR-------------------MPVRN 221
+ + G A +FG + +++
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299
Query: 222 LTSWNVMLAG------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGF 275
+ N +AG Y + G L ARRVF ++ D SW+ +I GLA+NG D+A
Sbjct: 300 ELAGNA-IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSV 358
Query: 276 FRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSK 335
F ++ G P+ +SL +L A + A G +H ++ K GFL +V N+L+ Y+
Sbjct: 359 FSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTF 418
Query: 336 CGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFIS 395
C ++ +F + VSW +I+ H E L+LF M S PD IT +
Sbjct: 419 CSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGN 478
Query: 396 LLYACSHSGLVEQGCEIFS-KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI 454
LL C ++ G ++ +K G+ P ++D+Y + L +A M
Sbjct: 479 LLRGCVEISSLKLGSQVHCYSLKT--GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD- 535
Query: 455 SPNAVIWRTLLGACSIHGNIELAELV--KARLAEMDPNN 491
+ + V W TL+ + G E A ++ + + A ++PN+
Sbjct: 536 NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 20/291 (6%)
Query: 193 TWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVM----LAGYTKAGELGLARRVFSEM 248
T+ + + AC +A R + + N ++ L+ Y K G L AR VF M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 249 PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK 308
P ++ VS++++I G + NG +A + ++L+E + P++ + ++ ACA + GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 309 ILHG---FMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGL 365
LH +E S L NALI Y + ++ A VF + + + ++SW+SIIAG
Sbjct: 189 QLHAQVIKLESSSHLI---AQNALIAMYVRFNQMSDASRVFYGIPM-KDLISWSSIIAGF 244
Query: 366 AMHGHGEEALQLFHEMEESGV-RPDGITFISLLYACSHSGLVEQGCEI--FSKMKNLYGI 422
+ G EAL EM GV P+ F S L ACS + G +I L G
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGN 304
Query: 423 EPTIEHYGC-MVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
GC + D+Y R L+ A Q+ P+ W ++ + +G
Sbjct: 305 AIA----GCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNG 350
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 121/294 (41%), Gaps = 22/294 (7%)
Query: 25 PRWVSLLSK-CSSLKPTK-----QIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYAL 78
P +SL S C+ KP QIH+++ G LL T L+
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLT--MYTFCSDLYCCF 426
Query: 79 RLFQHF-PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVAN 137
LF+ F N D+ +NT++ F ++ PD + L+G
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF-KLMLVSECEPDHITMGNLLRGCVE 485
Query: 138 GGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAA 197
SLK G+Q+HC + + G F+ LI MY +CG ARR+FD M +VV+W+
Sbjct: 486 ISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545
Query: 198 VTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG-YTKAGELGLAR---RVFSEMPLKDD 253
+ + G A +F M + +V G T +GL ++++ M +
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG 605
Query: 254 VS-----WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG 302
+S S ++ LA G ++A F E+ + P+ V +LSAC G
Sbjct: 606 ISPTKEHCSCVVDLLARAGRLNEAERFIDEM---KLEPDVVVWKTLLSACKTQG 656
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 260/516 (50%), Gaps = 49/516 (9%)
Query: 73 ALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFAL 132
AL A R+F D +N +I F+ M R + PD F+F L
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSIL 490
Query: 133 KGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVV 192
K GGSL G ++H + G ++ VG +LI MY +CG E A ++
Sbjct: 491 KA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF------ 543
Query: 193 TWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKD 252
F+ +V+G +M + L EM
Sbjct: 544 ---------FQRANVSGTMEELEKMHNKRL-----------------------QEMC--- 568
Query: 253 DVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHG 312
VSW+++I G + A F ++ GI P++ + VL CA ++ GK +H
Sbjct: 569 -VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 313 FMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGE 372
+ K + + L+D YSKCG++ ++L+F S+ R V+W ++I G A HG GE
Sbjct: 628 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGE 686
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCM 432
EA+QLF M ++P+ +TFIS+L AC+H GL+++G E F MK YG++P + HY M
Sbjct: 687 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 746
Query: 433 VDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIH-GNIELAELVKARLAEMDPNN 491
VD+ G++ ++ +A E I +MP + VIWRTLLG C+IH N+E+AE A L +DP +
Sbjct: 747 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 806
Query: 492 SGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVT 551
S + LLSNVYA AG W+ V +RR M + K PG S +E+ ++ F+ G+K +
Sbjct: 807 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRW 866
Query: 552 EEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEK 587
EE +++L I ++ + VRGV ++EEE++
Sbjct: 867 EEIYEELGLIYSEMKPFDD-SSFVRGV--EVEEEDQ 899
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 219/528 (41%), Gaps = 75/528 (14%)
Query: 30 LLSKCSSLKPTK---QIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPN 86
+L CS L+ T QIH + G T + LL A +LR+FQ P
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK--GKRFVESLRVFQGIPE 243
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
++ ++ +I F +M++ S +A L+ A L+ G Q
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAALSELRLGGQ 302
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT------- 199
LH A + F V T + MY +C + + A+ +FD N ++NA +T
Sbjct: 303 LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH 362
Query: 200 ----------------------------ACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG 231
AC ++ ++G + +++ S +V +A
Sbjct: 363 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG-LAIKSSLSLDVCVAN 421
Query: 232 -----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
Y K L A RVF EM +D VSW+ +I NG + F +LR I P
Sbjct: 422 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEP 481
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV- 345
+E + +L AC G+ +G +H + KSG SSV +LID YSKCG + A+ +
Sbjct: 482 DEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 540
Query: 346 ---FRNMSVGRSI---------------VSWTSIIAGLAMHGHGEEALQLFHEMEESGVR 387
F+ +V ++ VSW SII+G M E+A LF M E G+
Sbjct: 541 SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Query: 388 PDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGC--MVDLYGRAARLHKA 445
PD T+ ++L C++ G +I ++ + E + Y C +VD+Y + LH +
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQ---VIKKELQSDVYICSTLVDMYSKCGDLHDS 657
Query: 446 YEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKAR--LAEMDPNN 491
+ + + + V W ++ + HG E A + R L + PN+
Sbjct: 658 -RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 704
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 191/484 (39%), Gaps = 76/484 (15%)
Query: 32 SKCSSLKPTKQIHTHLYVTGLH--------------------THPLFFGKLLLHCAVT-- 69
+K +L+ KQ H H+ ++G + + F K+ L V+
Sbjct: 59 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWN 118
Query: 70 -------ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVF 122
S+ + A F P D +N+++ F+ M R F
Sbjct: 119 KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 178
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
D +FA LK + G Q+H R G DT V + L+ MY + + RV
Sbjct: 179 -DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP--------------VRNLTSWNVM 228
F +PE N V+W+A + C + ++ A F M +R+ + + +
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 229 LAG-------------------------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGL 263
G Y K + A+ +F + S++ MI G
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 264 AHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS 323
+ +A F L+ G+ +E+SL+GV ACA G ++G KS
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 324 SVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE 383
V NA ID Y KC +A A VF M R VSW +IIA +G G E L LF M
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 476
Query: 384 SGVRPDGITFISLLYACSHSGLVEQGCEIFSKM-KNLYGIEPTIEHYGC-MVDLYGRAAR 441
S + PD TF S+L AC+ G + G EI S + K+ ++ GC ++D+Y +
Sbjct: 477 SRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSV---GCSLIDMYSKCGM 532
Query: 442 LHKA 445
+ +A
Sbjct: 533 IEEA 536
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 170/417 (40%), Gaps = 75/417 (17%)
Query: 127 SFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM 186
+F+F K A G+L+ G Q H GF FV L+ +Y D SA VFD+M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 187 P-------------------------------EPNVVTWNAAVTACFRCGDVAGARGVF- 214
P +VV+WN+ ++ + G+ + VF
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 215 --GRMPVR------------------------------------NLTSWNVMLAGYTKAG 236
GR + ++ + + +L Y K
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 237 ELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLS 296
+ RVF +P K+ VSWS +I G N A FF+E+ + ++ VL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 297 ACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIV 356
+CA G LH KS F V A +D Y+KC N+ AQ++F N S +
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-SENLNRQ 348
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS-K 415
S+ ++I G + HG +AL LFH + SG+ D I+ + AC+ + +G +I+
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 416 MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
+K+ ++ + + +D+YG+ L +A+ +M +AV W ++ A +G
Sbjct: 409 IKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 35/252 (13%)
Query: 272 AFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALID 331
+F +F + L + + + + V CA+ GA E GK H M SGF + V N L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 332 TYSKCGNVAMAQLVFR------------------------------NMSVGRSIVSWTSI 361
Y+ + A +VF NM R +VSW S+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYG 421
++G +G +++++F +M G+ DG TF +L CS G +I + + G
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV-G 210
Query: 422 IEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVK 481
+ + ++D+Y + R ++ +P N+V W ++ C + N L L
Sbjct: 211 CDTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGC-VQNN--LLSLAL 266
Query: 482 ARLAEMDPNNSG 493
EM N+G
Sbjct: 267 KFFKEMQKVNAG 278
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 261/522 (50%), Gaps = 42/522 (8%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
+L++F P D +NT+I F +M P+S S A+ +
Sbjct: 161 SLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME-SSGFEPNSVSLTVAISACS 219
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
L+ G ++H + + GF+ +V + L+ MYG+C E AR VF +MP ++V WN+
Sbjct: 220 RLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNS 279
Query: 197 AVTACFRCGDVAGARGVFGRM----------------------------------PVRNL 222
+ GD + RM +R++
Sbjct: 280 MIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV 339
Query: 223 TSWNV-----MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFR 277
+ ++ ++ Y K GE LA VFS+ SW+ MI G++ +A +
Sbjct: 340 VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYD 399
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG 337
+++ G++P+ V+ T VL AC+Q A E GK +H + +S + +AL+D YSKCG
Sbjct: 400 QMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG 459
Query: 338 NVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLL 397
N A +F ++ + +VSWT +I+ HG EAL F EM++ G++PDG+T +++L
Sbjct: 460 NEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 398 YACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP-ISP 456
AC H+GL+++G + FS+M++ YGIEP IEHY CM+D+ GRA RL +AYE I Q P S
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578
Query: 457 NAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRR 516
NA + TL AC +H L + + L E P+++ +++L N+YA W +R
Sbjct: 579 NAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRL 638
Query: 517 TMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKL 558
M E + K PG S IE++ + F A ++ + E ++ L
Sbjct: 639 KMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 221/493 (44%), Gaps = 51/493 (10%)
Query: 26 RWVSLLSKCS----SLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALR-L 80
+ +SLL +C+ SL+ K +H + GL + K L++ T D H + R +
Sbjct: 5 KLLSLLRECTNSTKSLRRIKLVHQRILTLGLR-RDVVLCKSLINVYFTCKD--HCSARHV 61
Query: 81 FQHFP-NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
F++F D +++N+L+ F ++ PDSF+F +K G
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT 199
G +H + G+ V V ++L+ MY + E++ +VFDEMPE +V +WN ++
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 200 ACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAG------------------------ 231
++ G+ A +FGRM N S V ++
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 232 -----------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELL 280
Y K L +AR VF +MP K V+W++MI G G ++
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
EG RP++ +LT +L AC+++ GK +HG++ +S VN +LID Y KCG
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEAN 361
Query: 341 MAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
+A+ VF + SW +I+ G+ +A++++ +M GV+PD +TF S+L AC
Sbjct: 362 LAETVFSKTQKDVA-ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 401 SHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI 460
S +E+G +I + +E ++D+Y + +A+ +P + V
Sbjct: 421 SQLAALEKGKQIHLSISE-SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVS 478
Query: 461 WRTLLGACSIHGN 473
W ++ A HG
Sbjct: 479 WTVMISAYGSHGQ 491
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 201/473 (42%), Gaps = 89/473 (18%)
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP-EPNVVTWNAAV 198
SL+ +H + G V + +LI++Y C D SAR VF+ +V WN+ +
Sbjct: 19 SLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLM 78
Query: 199 TA-------------------CFRC-------GDVAGARGVFGR---------MPVRNLT 223
+ C C +V A G GR + V++
Sbjct: 79 SGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGY 138
Query: 224 SWNVMLAG-----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRE 278
+V++A Y K + +VF EMP +D SW+T+I +G ++A F
Sbjct: 139 VCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGR 198
Query: 279 LLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGN 338
+ G PN VSLT +SAC++ E GK +H K GF VN+AL+D Y KC
Sbjct: 199 MESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC 258
Query: 339 VAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLY 398
+ +A+ VF+ M +S+V+W S+I G G + +++ + M G RP T S+L
Sbjct: 259 LEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILM 317
Query: 399 ACSHS---------------GLVEQGCEIFSKMKNLY------GIEPTI---------EH 428
ACS S +V + + +LY + T+ E
Sbjct: 318 ACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES 377
Query: 429 YGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELVKARLA 485
+ M+ Y KA E QM + P+ V + ++L ACS +LA L K +
Sbjct: 378 WNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS-----QLAALEKGKQI 432
Query: 486 EMDPNNS---GDHVLLS---NVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMI 532
+ + S D +LLS ++Y+ G K+ I ++ ++ +V W+++
Sbjct: 433 HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV---SWTVM 482
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 144/369 (39%), Gaps = 49/369 (13%)
Query: 20 SNTLEPRWVSL---LSKCSSL---KPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDA 73
S+ EP VSL +S CS L + K+IH G L+ D
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC--DC 258
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALK 133
L A +FQ P +N++I+ +M T P + L
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR-PSQTTLTSILM 317
Query: 134 GVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF---------- 183
+ +L G +H R + ++V +LI +Y +CG++ A VF
Sbjct: 318 ACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES 377
Query: 184 ---------------------DEM----PEPNVVTWNAAVTACFRCGDVAGARGVFGRMP 218
D+M +P+VVT+ + + AC + + + + +
Sbjct: 378 WNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 219 VRNLTSWNVMLAG----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFG 274
L + ++L+ Y+K G A R+F+ +P KD VSW+ MI +G +A
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 275 FFRELLREGIRPNEVSLTGVLSACAQAGASEFG-KILHGFMEKSGFLYISSVNNALIDTY 333
F E+ + G++P+ V+L VLSAC AG + G K K G I + +ID
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 334 SKCGNVAMA 342
+ G + A
Sbjct: 558 GRAGRLLEA 566
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 170/566 (30%), Positives = 263/566 (46%), Gaps = 70/566 (12%)
Query: 29 SLLSKC---SSLKPTKQIHTHLYVTGLHTHPLFFGKLL----LHC-----AVTISDALHY 76
SLL +C SLK K IH HL +TG L + C A + D +H
Sbjct: 51 SLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHL 110
Query: 77 ---------------------ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQM 115
A +F P D +NT++ + +
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 116 RRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGD 175
RR F + FSFA L L+ Q H Q GF ++V + ++I Y
Sbjct: 171 RRSGIKF-NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYA---- 225
Query: 176 SESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKA 235
+CG + A+ F M V+++ W +++GY K
Sbjct: 226 ---------------------------KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKL 258
Query: 236 GELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
G++ A ++F EMP K+ VSW+ +I G GS ++A FR+++ G++P + + + L
Sbjct: 259 GDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL 318
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI 355
A A + GK +HG+M ++ + V ++LID YSK G++ ++ VFR
Sbjct: 319 CASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC 378
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
V W ++I+ LA HG G +AL++ +M + V+P+ T + +L ACSHSGLVE+G F
Sbjct: 379 VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFES 438
Query: 416 MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIE 475
M +GI P EHY C++DL GRA + I +MP P+ IW +LG C IHGN E
Sbjct: 439 MTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEE 498
Query: 476 LAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEIN 535
L + L ++DP +S ++LLS++YA GKW+ V +R M ++ + K S IEI
Sbjct: 499 LGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIE 558
Query: 536 KVMYGFVAGEKPNEVTEEAHDKLREI 561
K + F + + AH + EI
Sbjct: 559 KKVEAFTVSDGSH-----AHARKEEI 579
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 33/257 (12%)
Query: 264 AHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS 323
A QA L ++GIR L +L C + + GK +H ++ +GF +
Sbjct: 22 ATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPN 81
Query: 324 S-VNNALIDTYSKCGNVAMAQLVF-----------RNMSVG------------------- 352
+ ++N LI Y KCG A VF NM G
Sbjct: 82 TLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPE 141
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEI 412
R +VSW +++ G A G+ EAL + E SG++ + +F LL AC S ++ +
Sbjct: 142 RDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQA 201
Query: 413 FSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
++ + G + ++D Y + ++ A +M + + IW TL+ + G
Sbjct: 202 HGQVL-VAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DIHIWTTLISGYAKLG 259
Query: 473 NIELAELVKARLAEMDP 489
++E AE + + E +P
Sbjct: 260 DMEAAEKLFCEMPEKNP 276
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 253/521 (48%), Gaps = 45/521 (8%)
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
R+F P + + +I F +M R + D+++FA ALK A
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYTFAIALKACAGL 222
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
+K G +H GF T + V +L +MY ECG+ + +F+ M E +VV+W + +
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 199 TACFRCGDVAGARGVFGRMPVRN------------------------------------- 221
A R G A F +M RN
Sbjct: 283 VAYKRIGQEVKAVETFIKM--RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 222 ----LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFR 277
L+ N M+ Y+ G L A +F M +D +SWST+I G G ++ F +F
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG 337
+ + G +P + +L +LS E G+ +H G S+V ++LI+ YSKCG
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCG 460
Query: 338 NVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLL 397
++ A ++F IVS T++I G A HG +EA+ LF + + G RPD +TFIS+L
Sbjct: 461 SIKEASMIFGETDRD-DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVL 519
Query: 398 YACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPN 457
AC+HSG ++ G F+ M+ Y + P EHYGCMVDL RA RL A + I +M +
Sbjct: 520 TACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKD 579
Query: 458 AVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRT 517
V+W TLL AC G+IE R+ E+DP + V L+N+Y+ G ++ ++R+
Sbjct: 580 DVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKN 639
Query: 518 MTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKL 558
M + ++K PGWS I+I + FV+G++ + +E+ ++ L
Sbjct: 640 MKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 177/412 (42%), Gaps = 42/412 (10%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRR-HPTVFPDSFSFAFAL 132
L A ++F P+ D + ++I+ F MR V PD+ + L
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 133 KGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVV 192
K ++ G LH A + + V+VG++L+ MY G + + RVF EMP N V
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 193 TWNAAVTACFRCGD-----------------------------VAGARGV-FG------- 215
TW A +T G AG R V +G
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 216 --RMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAF 273
R V L N + YT+ GE+ +F M +D VSW+++IV G +A
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAV 295
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
F ++ + PNE + + SACA +G+ LH + G SV+N+++ Y
Sbjct: 296 ETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMY 355
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
S CGN+ A ++F+ M R I+SW++II G G GEE + F M +SG +P
Sbjct: 356 STCGNLVSASVLFQGMRC-RDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFAL 414
Query: 394 ISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKA 445
SLL + ++E G ++ + + +G+E ++++Y + + +A
Sbjct: 415 ASLLSVSGNMAVIEGGRQVHA-LALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 160/345 (46%), Gaps = 17/345 (4%)
Query: 132 LKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSE------SARRVFDE 185
L+ + N G+L+ Q+ HG + T++I Y +S+ SA RV D
Sbjct: 47 LRSLINAGNLRAARQVF-DKMPHG---DIVSWTSIIKRYVTANNSDEALILFSAMRVVDH 102
Query: 186 MPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS----WNVMLAGYTKAGELGLA 241
P+ + + AC + ++A + +L S + +L Y + G++ +
Sbjct: 103 AVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 242 RRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQA 301
RVFSEMP ++ V+W+ +I GL H G + + +F E+ R + + L ACA
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 302 GASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSI 361
++GK +H + GF+ V N+L Y++CG + +F NMS R +VSWTS+
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSL 281
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYG 421
I G +A++ F +M S V P+ TF S+ AC+ + G ++ + +L G
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL-G 340
Query: 422 IEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLG 466
+ ++ M+ +Y L A + Q + + W T++G
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSA-SVLFQGMRCRDIISWSTIIG 384
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 171/433 (39%), Gaps = 53/433 (12%)
Query: 31 LSKCSSLKPTK---QIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNP 87
L C+ L+ K IHTH+ V G T L T + L LF++
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLAT--MYTECGEMQDGLCLFENMSER 273
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
D + +LI FI+MR + V P+ +FA A+ L G QL
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMR-NSQVPPNEQTFASMFSACASLSRLVWGEQL 332
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCG-- 205
HC G + + V +++ MY CG+ SA +F M ++++W+ + + G
Sbjct: 333 HCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFG 392
Query: 206 --------------------DVAGARGVFGRMPV-----------------RNLTSWNVM 228
+A V G M V +N T + +
Sbjct: 393 EEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSL 452
Query: 229 LAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNE 288
+ Y+K G + A +F E D VS + MI G A +G +A F + L+ G RP+
Sbjct: 453 INMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDS 512
Query: 289 VSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN-NALIDTYSKCGNVAMAQLVFR 347
V+ VL+AC +G + G M+++ + + + ++D + G ++ A+ +
Sbjct: 513 VTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 348 NMSVGRSIVSWTSIIAGLAMHG---HGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
MS + V WT+++ G G A + E++ + ++L S +G
Sbjct: 573 EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTC----ATALVTLANIYSSTG 628
Query: 405 LVEQGCEIFSKMK 417
+E+ + MK
Sbjct: 629 NLEEAANVRKNMK 641
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 7/269 (2%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL--LREG 283
N L AG L AR+VF +MP D VSW+++I + D+A F + +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 284 IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQ 343
+ P+ L+ VL AC Q+ +G+ LH + K+ L V ++L+D Y + G + +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 344 LVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHS 403
VF M R+ V+WT+II GL G +E L F EM S D TF L AC+
Sbjct: 164 RVFSEMPF-RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 404 GLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRT 463
V+ G I + + + G T+ + +Y + M + V W +
Sbjct: 223 RQVKYGKAIHTHVI-VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTS 280
Query: 464 LLGACS-IHGNIELAE-LVKARLAEMDPN 490
L+ A I ++ E +K R +++ PN
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPN 309
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 247/456 (54%), Gaps = 71/456 (15%)
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNV------------ 191
G LH ++ + G + V VG++LISMYG+CG SAR+VFDEMPE NV
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 192 --------------------VTWNAAVTACFRCGDVAGARGVFGRMP--VRNLTSWNVML 229
VTW + + ++ AR +F RMP ++N+ +W+VML
Sbjct: 125 NGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVML 184
Query: 230 -------------------------------AGYTKAGELGLARRVFSEMPLKDDVSWST 258
+GY + G++ AR +F + +D V W+T
Sbjct: 185 GVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNT 244
Query: 259 MIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG 318
+I G A NG D A F + EG P+ V+++ +LSACAQ+G + G+ +H + G
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG 304
Query: 319 FLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLF 378
V+NALID Y+KCG++ A VF ++SV RS+ S+I+ LA+HG G+EAL++F
Sbjct: 305 IELNQFVSNALIDMYAKCGDLENATSVFESISV-RSVACCNSMISCLAIHGKGKEALEMF 363
Query: 379 HEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGR 438
ME ++PD ITFI++L AC H G + +G +IFS+MK ++P ++H+GC++ L GR
Sbjct: 364 STMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKT-QDVKPNVKHFGCLIHLLGR 422
Query: 439 AARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARL---AEMDPNNSGDH 495
+ +L +AY + +M + PN + LLGAC +H + E+AE V + + + S +H
Sbjct: 423 SGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENH 482
Query: 496 VL-LSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWS 530
+ +SN+YA +W+ ++R M ++ + K+PG S
Sbjct: 483 LASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 13/280 (4%)
Query: 58 FFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRR 117
F L++ I D +H A +F D ++NTLI F M+
Sbjct: 209 FVWSLMMSGYFRIGD-VHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQG 267
Query: 118 HPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSE 177
PD+ + + L A G L G ++H G + + FV LI MY +CGD E
Sbjct: 268 EGYE-PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLE 326
Query: 178 SARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYT 233
+A VF+ + +V N+ ++ G A +F M +L ++ +L
Sbjct: 327 NATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACV 386
Query: 234 KAGELGLARRVFSEMPLKD---DVS-WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEV 289
G L ++FSEM +D +V + +I L +G +A+ +E+ ++PN+
Sbjct: 387 HGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM---HVKPNDT 443
Query: 290 SLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNAL 329
L +L AC +E + + +E +G + S N L
Sbjct: 444 VLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHL 483
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 190/662 (28%), Positives = 294/662 (44%), Gaps = 78/662 (11%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
L+LF P D +NT++ F +M R DSF+ + L
Sbjct: 237 VLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGD--------------------- 175
+ L G +LH +A R G + V LI Y + D
Sbjct: 297 DSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTE 356
Query: 176 ----------SESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL--- 222
+SA +F + E N +T+NA + R G A +F M R +
Sbjct: 357 MITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELT 416
Query: 223 -------------------------------TSWN-----VMLAGYTKAGELGLARRVFS 246
T++N +L T+ + A +F
Sbjct: 417 DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD 476
Query: 247 EMPLKDDVSWST--MIVGLAHNGSFDQAFGFF-RELLREGIRPNEVSLTGVLSACAQAGA 303
+ P D S +T +I G A NG D+A F R L + + +EVSLT +L+ C G
Sbjct: 477 QWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGF 536
Query: 304 SEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIA 363
E G +H + K+G+ S+ N+LI Y+KC + A +F M ++SW S+I+
Sbjct: 537 REMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLIS 595
Query: 364 GLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA--CSHSGLVEQGCEIFSKMKNLYG 421
+ +G+EAL L+ M E ++PD IT ++ A + S + ++F MK +Y
Sbjct: 596 CYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYD 655
Query: 422 IEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVK 481
IEPT EHY V + G L +A + I MP+ P + R LL +C IH N +A+ V
Sbjct: 656 IEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVA 715
Query: 482 ARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGF 541
+ P +++L SN+Y+ +G W IR M E+ K P S I ++ F
Sbjct: 716 KLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSF 775
Query: 542 VAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAA 601
A + + ++ + L EI++ + GY P VL +++E K+ + HS KLA
Sbjct: 776 HARDTSHPQEKDIYRGL-EILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVT 834
Query: 602 FGI-AKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRD 660
+GI + +GK +R++KN+ +CGDCH K IS + EI++RD S FH F +G CSCRD
Sbjct: 835 YGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRD 894
Query: 661 YW 662
W
Sbjct: 895 LW 896
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 160/414 (38%), Gaps = 81/414 (19%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A+ +F +P Y LI F +MR+ V P+ ++F L
Sbjct: 133 AILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACV 192
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDS--ESARRVFDEMPEPNVVTW 194
G Q+H + GF VFV +L+S+Y + S + ++FDE+P+ +V +W
Sbjct: 193 RVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASW 252
Query: 195 NAAVTACFRCGDVAGARGVFGRMP------------------------------------ 218
N V++ + G A +F M
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAI 312
Query: 219 ----VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIV------------- 261
++ L+ N ++ Y+K ++ ++ M +D V+++ MI
Sbjct: 313 RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVE 372
Query: 262 ------------------GLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGA 303
G NG +A F ++L+ G+ + SLT + AC
Sbjct: 373 IFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSE 432
Query: 304 SEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF----RNMSVGRSIVSWT 359
+ + +HGF K G + + AL+D ++C +A A+ +F N+ ++ T
Sbjct: 433 KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKAT---T 489
Query: 360 SIIAGLAMHGHGEEALQLFHE-MEESGVRPDGITFISLLYACSHSGLVEQGCEI 412
SII G A +G ++A+ LFH + E + D ++ +L C G E G +I
Sbjct: 490 SIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI 543
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 5/264 (1%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREG-I 284
N +++ Y K G A VF + VS++ +I G + +A F + + G +
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSK-CGNVAMAQ 343
+PNE + +L+AC + G +HG + KSGFL V+N+L+ Y K G+
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 344 LVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE-SGVRPDGITFISLLYACSH 402
L + R + SW ++++ L G +A LF+EM G D T +LL +C+
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWR 462
S ++ +G E+ + + G+ + ++ Y + + K E + +M ++ +AV +
Sbjct: 298 SSVLLRGRELHGRAIRI-GLMQELSVNNALIGFYSKFWDMKKV-ESLYEMMMAQDAVTFT 355
Query: 463 TLLGACSIHGNIELAELVKARLAE 486
++ A G ++ A + A + E
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTE 379
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
+ + NALI TY K G A LVF ++S ++VS+T++I+G + EAL++F M
Sbjct: 114 TRLGNALISTYLKLGFPREAILVFVSLS-SPTVVSYTALISGFSRLNLEIEALKVFFRMR 172
Query: 383 ESG-VRPDGITFISLLYACSHSGLVEQGCEI 412
++G V+P+ TF+++L AC G +I
Sbjct: 173 KAGLVQPNEYTFVAILTACVRVSRFSLGIQI 203
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/550 (30%), Positives = 262/550 (47%), Gaps = 44/550 (8%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDS-FSFAFALKGV 135
L++F + P +T+ ++T++ F R DS + F L +
Sbjct: 172 GLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSL 231
Query: 136 ANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN 195
A + G Q+HC ++G V + L++MY +C A ++FD + N +TW+
Sbjct: 232 AATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 196 AAVTACFRCGDVAGARGVFGRM------PV------------------------------ 219
A VT + G+ A +F RM P
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 220 ---RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
R+L + ++ Y KAG L AR+ F + +D W+++I G N ++A +
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
R + GI PN+ ++ VL AC+ E GK +HG K GF + +AL YSKC
Sbjct: 412 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKC 471
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
G++ LVFR + + +VSW ++I+GL+ +G G+EAL+LF EM G+ PD +TF+++
Sbjct: 472 GSLEDGNLVFRR-TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISP 456
+ ACSH G VE+G F+ M + G++P ++HY CMVDL RA +L +A EFI I
Sbjct: 531 ISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDH 590
Query: 457 NAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRR 516
+WR LL AC HG EL +L + S +V LS +Y G+ +DV + +
Sbjct: 591 GLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWK 650
Query: 517 TMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVR 576
M + K G S IE+ + FV G+ + + EE D L ++ R E G+ +
Sbjct: 651 HMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKD-LVCLVSRQMIEEGFVTVLD 709
Query: 577 GVLHDIEEEE 586
+EEEE
Sbjct: 710 SSF--VEEEE 717
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 20/266 (7%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFG---FFRELLRE 282
NV++ Y K G+L A +F+ + KD VSW+++I G + NG ++ FRE+ +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 283 GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMA 342
I PN +L G+ A + +S G+ H + K V+ +L+ Y K G V
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 343 QLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFH---EMEESGVRPDGITFISLLYA 399
VF M R+ +W+++++G A G EEA+++F+ +E G D + F ++L +
Sbjct: 173 LKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSS 230
Query: 400 CSHSGLVEQGCEIFS-KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISP-- 456
+ + V G +I +KN G+ + +V +Y + L++A C+M S
Sbjct: 231 LAATIYVGLGRQIHCITIKN--GLLGFVALSNALVTMYSKCESLNEA----CKMFDSSGD 284
Query: 457 -NAVIWRTLLGACSIHGNIELAELVK 481
N++ W ++ S +G E E VK
Sbjct: 285 RNSITWSAMVTGYSQNG--ESLEAVK 308
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 120/303 (39%), Gaps = 53/303 (17%)
Query: 28 VSLLSKCSS---LKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHF 84
V +L+ CS L+ KQ+H+ L G H F L + L A + F
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFERH--LFATTALVDMYAKAGCLADARKGFDCL 383
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPT--VFPDSFSFAFALKGVANGGSLK 142
D ++ +LI I RR T + P+ + A LK ++ +L+
Sbjct: 384 QERDVALWTSLI---SGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLE 440
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACF 202
G Q+H +HGF V +G+ L +MY +CG E VF P +VV+WNA
Sbjct: 441 LGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNA------ 494
Query: 203 RCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWST 258
M++G + G+ A +F EM + DDV++
Sbjct: 495 -------------------------MISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVN 529
Query: 259 MIVGLAHNGSFDQAFGFFRELLRE-GIRPNEVSLTGVLSACAQAG----ASEF---GKIL 310
+I +H G ++ + +F + + G+ P ++ ++AG A EF I
Sbjct: 530 IISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANID 589
Query: 311 HGF 313
HG
Sbjct: 590 HGL 592
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 20/249 (8%)
Query: 284 IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQ 343
+ P+ +L L+ +Q G+ +HG + ++G N L++ Y+KCG +A A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 344 LVFRNMSVGRSIVSWTSIIAGLAMHG---HGEEALQLFHEMEESGVRPDGITFISLLYAC 400
+F N + + +VSW S+I G + +G +QLF EM + P+ T + A
Sbjct: 70 SIF-NAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 401 S---HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPN 457
S S + Q + KM + I +V +Y +A + + MP N
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTS----LVGMYCKAGLVEDGLKVFAYMP-ERN 183
Query: 458 AVIWRTLLGACSIHGNIELA-ELVKARLAEMDPNNSGDHV-------LLSNVYAVAGKWK 509
W T++ + G +E A ++ L E + + D+V L + +Y G+
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 510 DVVSIRRTM 518
++I+ +
Sbjct: 244 HCITIKNGL 252
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 231/394 (58%), Gaps = 6/394 (1%)
Query: 174 GDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVF-GRMPVRNLTSWNVMLAGY 232
G S A + DE EP + NA + A +CG+V A +F G R L S+N +L+GY
Sbjct: 456 GYSVKAGLLHDE-EEPKL--GNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGY 512
Query: 233 TKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLT 292
+G A+ +F+EM D +WS M+ A + ++A G FRE+ G+RPN V++
Sbjct: 513 VNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIM 572
Query: 293 GVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVG 352
+L CAQ + + HG++ + G I + L+D Y+KCG++ A VF++
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGGLGDIR-LKGTLLDVYAKCGSLKHAYSVFQS-DAR 630
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEI 412
R +V +T+++AG A+HG G+EAL ++ M ES ++PD + ++L AC H+GL++ G +I
Sbjct: 631 RDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQI 690
Query: 413 FSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
+ ++ ++G++PT+E Y C VDL R RL AY F+ QMP+ PNA IW TLL AC+ +
Sbjct: 691 YDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYN 750
Query: 473 NIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMI 532
++L V L + + +++G+HVL+SN+YA KW+ V+ +R M ++ M K G S +
Sbjct: 751 RMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWL 810
Query: 533 EINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLR 566
E++ FV+G+ + + D + + L+++
Sbjct: 811 EVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 188/449 (41%), Gaps = 52/449 (11%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECG-DSESARR 181
P S +FA L G G +H + G + VG L+SMY + G A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 182 VFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM----------------PV-----R 220
FD + + +VV+WNA + +A A F M PV +
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 221 NLT--------------SW--------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWST 258
N+ SW N +++ Y + G + A +F+ M KD VSW+
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNV 299
Query: 259 MIVGLAHNGSFDQAFGFFRELLREG-IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS 317
+I G A N + +AF F L+ +G + P+ V++ +L CAQ GK +H ++ +
Sbjct: 300 VIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRH 359
Query: 318 GFLY-ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQ 376
+L +SV NALI Y++ G+ + A F MS + I+SW +I+ A + L
Sbjct: 360 SYLLEDTSVGNALISFYARFGDTSAAYWAFSLMST-KDIISWNAILDAFADSPKQFQFLN 418
Query: 377 LFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEI--FSKMKNLYGIEPTIEHYGCMVD 434
L H + + D +T +SLL C + + + E+ +S L E + ++D
Sbjct: 419 LLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLD 478
Query: 435 LYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGD 494
Y + + A++ + V + +LL G+ + A+++ EM +
Sbjct: 479 AYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQML---FTEMSTTDLTT 535
Query: 495 HVLLSNVYAVAGKWKDVVSIRRTMTEQSM 523
L+ +YA + + + + R + + M
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGM 564
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 165/403 (40%), Gaps = 50/403 (12%)
Query: 112 FIQMRRHPTVF-PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMY 170
F+Q R + F D F +K A+ L G LH F+ G V ++++MY
Sbjct: 7 FVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMY 66
Query: 171 GECGDSESARRVFDEMPEPNVVTWNAAVTA------------------------------ 200
+C + +++F +M + V WN +T
Sbjct: 67 AKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFA 126
Query: 201 -----CFRCGDVAGARGVFGRMPVRNLTS----WNVMLAGYTKAGEL-GLARRVFSEMPL 250
C R GD + + + L N +++ Y K G + A F +
Sbjct: 127 IVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIAD 186
Query: 251 KDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG---ASEFG 307
KD VSW+ +I G + N AF F +L+E PN ++ VL CA A G
Sbjct: 187 KDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSG 246
Query: 308 KILHGFMEKSGFLYISS-VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLA 366
+ +H ++ + +L V N+L+ Y + G + A +F M + +VSW +IAG A
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG-SKDLVSWNVVIAGYA 305
Query: 367 MHGHGEEALQLFHEMEESG-VRPDGITFISLLYACSHSGLVEQGCEIFSK-MKNLYGIEP 424
+ +A QLFH + G V PD +T IS+L C+ + G EI S +++ Y +E
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 425 TIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA 467
T ++ Y R AY M + + + W +L A
Sbjct: 366 T-SVGNALISFYARFGDTSAAYWAFSLMS-TKDIISWNAILDA 406
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 106/268 (39%), Gaps = 16/268 (5%)
Query: 267 GSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN 326
G Q FR L G + V+ ACA G+ LHG + K G + S V+
Sbjct: 2 GPLRQFVQNFR--LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVS 59
Query: 327 NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME-ESG 385
++++ Y+KC + Q +FR M +V W ++ GL++ G E ++ F M
Sbjct: 60 KSVLNMYAKCRRMDDCQKMFRQMDSLDPVV-WNIVLTGLSV-SCGRETMRFFKAMHFADE 117
Query: 386 VRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL--- 442
+P +TF +L C G G + S + G+E +V +Y + +
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKA-GLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 443 -HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNV 501
+ A++ I + V W ++ S N +A+ ++ + ++ ++NV
Sbjct: 177 AYTAFDGIAD----KDVVSWNAIIAGFS--ENNMMADAFRSFCLMLKEPTEPNYATIANV 230
Query: 502 YAVAGKWKDVVSIRRTMTEQSMVKTPGW 529
V ++ R S V W
Sbjct: 231 LPVCASMDKNIACRSGRQIHSYVVQRSW 258
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 265/519 (51%), Gaps = 71/519 (13%)
Query: 29 SLLSKC-SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNP 87
SL+ K S+LK Q+H+H +G LLLH Q +
Sbjct: 41 SLMQKYESNLKIIHQLHSHFTTSGF---------LLLH----------------QKQNSG 75
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRR------HPTVFP--DSFSFAFALKGVANG- 138
F++N L+R + Q++R H P DSF++ F LK +N
Sbjct: 76 KLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPR 135
Query: 139 -GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAA 197
SL G LH + GF++HV+V T L+ MY G+ A +VFDE
Sbjct: 136 FPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDE------------ 183
Query: 198 VTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWS 257
MP RN +WNVM+ G T G+ A +MP + VSW+
Sbjct: 184 -------------------MPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWT 224
Query: 258 TMIVGLAHNGSFDQAFGFFRELLR-EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEK 316
T+I G A +A F ++ + I+PNE+++ +L A G + +H ++ K
Sbjct: 225 TIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGK 284
Query: 317 SGFLYIS-SVNNALIDTYSKCGNVAMAQLVFRNMSVGR-SIVSWTSIIAGLAMHGHGEEA 374
GF+ V N+LID Y+KCG + A F + GR ++VSWT++I+ A+HG G+EA
Sbjct: 285 RGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEA 344
Query: 375 LQLFHEMEESGVRPDGITFISLLYACSHSGLVEQG-CEIFSKMKNLYGIEPTIEHYGCMV 433
+ +F +ME G++P+ +T IS+L ACSH GL E+ E F+ M N Y I P ++HYGC+V
Sbjct: 345 VSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLV 404
Query: 434 DLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSG 493
D+ R RL +A + ++PI AV+WR LLGACS++ + ELAE V +L E++ ++ G
Sbjct: 405 DMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGG 464
Query: 494 DHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMI 532
D+VL+SN++ G++ D R+ M + + K PG S +
Sbjct: 465 DYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 251/495 (50%), Gaps = 40/495 (8%)
Query: 71 SDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAF 130
SD + A ++F P D +I F ++ + P+ F+F
Sbjct: 40 SDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLL-CLGIRPNEFTFGT 98
Query: 131 ALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPN 190
+ +K G QLHC A + G ++VFVG+ +++ Y + ARR FD+ +PN
Sbjct: 99 VIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPN 158
Query: 191 VVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPL 250
VV+ + NL S GY K E A +F MP
Sbjct: 159 VVS-------------------------ITNLIS------GYLKKHEFEEALSLFRAMPE 187
Query: 251 KDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR-PNEVSLTGVLSACAQAGASEFGKI 309
+ V+W+ +I G + G ++A F ++LREG+ PNE + ++A + + GK
Sbjct: 188 RSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKS 247
Query: 310 LHGFMEK-SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV-GRSIVSWTSIIAGLAM 367
+H K G + V N+LI YSKCGN+ + L F + R+IVSW S+I G A
Sbjct: 248 IHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAH 307
Query: 368 HGHGEEALQLFHEM-EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTI 426
+G GEEA+ +F +M +++ +RP+ +T + +L+AC+H+GL+++G F+K N Y +P +
Sbjct: 308 NGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNL 366
Query: 427 ---EHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKAR 483
EHY CMVD+ R+ R +A E I MP+ P W+ LLG C IH N LA+L ++
Sbjct: 367 LELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASK 426
Query: 484 LAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVA 543
+ E+DP + +V+LSN Y+ W++V IRR M E + + G S IE+ + FV
Sbjct: 427 ILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVN 486
Query: 544 GEKPNEVTEEAHDKL 558
+K NE+ +E + L
Sbjct: 487 ADKNNELKDEVYRML 501
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/576 (30%), Positives = 266/576 (46%), Gaps = 87/576 (15%)
Query: 84 FPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKP 143
P MYN +++ F ++R ++PD+F+ LK + +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQG-LYPDNFTLPVVLKSIGRLRKVIE 64
Query: 144 GTQLHCQAFRHGFDTHVFVGTT-------------------------------LISMYGE 172
G ++H A + G + +V + LIS Y
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 173 CGDSESARRVFDEMP---------------------------------------EPNVVT 193
G E A VF M E +V
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 194 WNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDD 253
NA V +CG + AR VF M +N+ W M+ GY G + AR +F P+KD
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
V W+ M+ G FD+A FR + GIRP+ L +L+ CAQ GA E GK +HG+
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEE 373
+ ++ V AL+D Y+KCG + A VF + R SWTS+I GLAM+G
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNGMSGR 363
Query: 374 ALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMV 433
AL L++EME GVR D ITF+++L AC+H G V +G +IF M + ++P EH C++
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 434 DLYGRAARLHKAYEFICQMPISPNAV---IWRTLLGACSIHGNIELAELVKARLAEMDPN 490
DL RA L +A E I +M + ++ +LL A +GN+++AE V +L +++ +
Sbjct: 424 DLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVS 483
Query: 491 NSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEV 550
+S H LL++VYA A +W+DV ++RR M + + K PG S IEI+ V + F+ G+
Sbjct: 484 DSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDL--- 540
Query: 551 TEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEE 586
+H K+ EI L Q ++ D+E +E
Sbjct: 541 --LSHPKMDEINSMLH-------QTTNLMLDLEHKE 567
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/483 (31%), Positives = 254/483 (52%), Gaps = 18/483 (3%)
Query: 41 KQIHTHLYVTGLHTHPLFFGKLL---LHCAVTISDALHYALRLFQHFPNPDTFMYNTLIR 97
+ +H HL +G+ KL+ + C + A ++F P D +I
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLD-----ARKVFDEMPKRDISGCVVMIG 90
Query: 98 XXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFD 157
F +M + D+F LK N + G +HC + ++
Sbjct: 91 ACARNGYYQESLDFFREMYKDGLKL-DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 158 THVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM 217
+ F+ ++LI MY + G+ +AR+VF ++ E ++V +NA ++ A + M
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 218 PVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSF 269
+ ++ +WN +++G++ + M L D VSW+++I GL HN
Sbjct: 210 KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQN 269
Query: 270 DQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNAL 329
++AF F+++L G+ PN ++ +L AC + GK +HG+ +G V +AL
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329
Query: 330 IDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPD 389
+D Y KCG ++ A ++FR + ++ V++ S+I A HG ++A++LF +ME +G + D
Sbjct: 330 LDMYGKCGFISEAMILFRK-TPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLD 388
Query: 390 GITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFI 449
+TF ++L ACSH+GL + G +F M+N Y I P +EHY CMVDL GRA +L +AYE I
Sbjct: 389 HLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMI 448
Query: 450 CQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWK 509
M + P+ +W LL AC HGN+ELA + LAE++P NSG+ +LL+++YA AG W+
Sbjct: 449 KAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWE 508
Query: 510 DVV 512
VV
Sbjct: 509 SVV 511
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 307 GKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLA 366
G++LH + SG ++ + L+ Y +CG V A+ VF M R I +I A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMP-KRDISGCVVMIGACA 93
Query: 367 MHGHGEEALQLFHEMEESGVRPDGITFISLLYA 399
+G+ +E+L F EM + G++ D SLL A
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA 126
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 244/508 (48%), Gaps = 38/508 (7%)
Query: 71 SDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAF 130
++ AL +F P F +N +I F +M PD ++F+
Sbjct: 151 AEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLE-SEFKPDCYTFSS 209
Query: 131 ALKGV-ANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEP 189
+ A+ ++ G +H ++G+ + V +++S Y + G + A R + +
Sbjct: 210 LMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVL 269
Query: 190 NVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMP 249
V+WN+ + AC K GE A VF P
Sbjct: 270 TQVSWNSIIDACM-------------------------------KIGETEKALEVFHLAP 298
Query: 250 LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKI 309
K+ V+W+TMI G NG +QA FF E+++ G+ + + VL AC+ GK+
Sbjct: 299 EKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKM 358
Query: 310 LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHG 369
+HG + GF + V NAL++ Y+KCG++ A F +++ + +VSW +++ +HG
Sbjct: 359 IHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHG 417
Query: 370 HGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHY 429
++AL+L+ M SG++PD +TFI LL CSHSGLVE+GC IF M Y I ++H
Sbjct: 418 LADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHV 477
Query: 430 GCMVDLYGRAARLHKAYEFICQ----MPISPNAVIWRTLLGACSIHGNIELAELVKARLA 485
CM+D++GR L +A + + S N W TLLGACS H + EL V L
Sbjct: 478 TCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLK 537
Query: 486 EMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGE 545
+P+ VLLSN+Y G+WK+ +RR M E+ M KTPG S IE+ + FV G+
Sbjct: 538 IAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGD 597
Query: 546 KPNEVTEEAHDKLREIMLRLRAEAGYAP 573
+ EE + L + +R + P
Sbjct: 598 SSHPRLEELSETLNCLQHEMRNPETFGP 625
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 188/433 (43%), Gaps = 75/433 (17%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A ++F P DT +NT++ F Q+R PD +SF L A
Sbjct: 23 ARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLR-FSDAKPDDYSFTAILSTCA 81
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM--PEPNVVTW 194
+ G++K G ++ R GF + V +LI MYG+C D+ SA +VF +M N VTW
Sbjct: 82 SLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTW 141
Query: 195 NAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV 254
+ + A A VF MP R +WN+M++G+
Sbjct: 142 CSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGH---------------------- 179
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC-AQAGASEFGKILHGF 313
AH G + F+E+L +P+ + + +++AC A + +G+++H
Sbjct: 180 ---------AHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAV 230
Query: 314 MEKSGFLYISSVNNALIDTYSKCGN----------------VAMAQLVFRNMSVG----- 352
M K+G+ N+++ Y+K G+ V+ ++ M +G
Sbjct: 231 MLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKA 290
Query: 353 ---------RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHS 403
++IV+WT++I G +G GE+AL+ F EM +SGV D + ++L+ACS
Sbjct: 291 LEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGL 350
Query: 404 GLVEQGCEIFSKMKNLYGIEPTIEHYG----CMVDLYGRAARLHKAYEFICQMPISPNAV 459
L+ G KM + I + Y +V+LY + + +A + + + V
Sbjct: 351 ALLGHG-----KMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLV 404
Query: 460 IWRTLLGACSIHG 472
W T+L A +HG
Sbjct: 405 SWNTMLFAFGVHG 417
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 127/283 (44%), Gaps = 37/283 (13%)
Query: 229 LAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNE 288
+A K+G + AR+VF MP D V+W+TM+ + G +A F +L +P++
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 289 VSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRN 348
S T +LS CA G +FG+ + + +SGF VNN+LID Y KC + A VFR+
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 349 MSV-GRSIVSWTSI-------------------------------IAGLAMHGHGEEALQ 376
M R+ V+W S+ I+G A G E L
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 377 LFHEMEESGVRPDGITFISLLYACS-HSGLVEQGCEIFSKM-KNLYGIEPTIEHYGCMVD 434
LF EM ES +PD TF SL+ ACS S V G + + M KN G +E ++
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN--GWSSAVEAKNSVLS 248
Query: 435 LYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
Y + A + + + V W +++ AC G E A
Sbjct: 249 FYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETEKA 290
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/562 (30%), Positives = 263/562 (46%), Gaps = 45/562 (8%)
Query: 41 KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXX 100
+QIH + GLH P LL + + A +F + ++N ++
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLL--SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 101 XXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHV 160
F MR+ +V PDSF+ + + + G G +H + F+ +
Sbjct: 350 ENDYGYSALDLFGFMRQ-KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS 408
Query: 161 FVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP-- 218
+ + L+++Y +CG A VF M E ++V W + ++ + G A VFG M
Sbjct: 409 TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDD 468
Query: 219 ---------------------------------------VRNLTSWNVMLAGYTKAGELG 239
V N+ + ++ Y+K G
Sbjct: 469 DDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPE 528
Query: 240 LARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACA 299
+A +VF+ M ++ V+W++MI + N + + F +L +GI P+ VS+T VL A +
Sbjct: 529 MALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588
Query: 300 QAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWT 359
+ GK LHG+ + G + + NALID Y KCG A+ +F+ M +S+++W
Sbjct: 589 STASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ-HKSLITWN 647
Query: 360 SIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNL 419
+I G HG AL LF EM+++G PD +TF+SL+ AC+HSG VE+G IF MK
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQD 707
Query: 420 YGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAEL 479
YGIEP +EHY MVDL GRA L +AY FI MPI ++ IW LL A H N+EL L
Sbjct: 708 YGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGIL 767
Query: 480 VKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMY 539
+L M+P +V L N+Y AG + + M E+ + K PG S IE++
Sbjct: 768 SAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTN 827
Query: 540 GFVAGEKPNEVTEEAHDKLREI 561
F +G + + E + L +
Sbjct: 828 VFFSGGSSSPMKAEIFNVLNRL 849
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 179/400 (44%), Gaps = 44/400 (11%)
Query: 115 MRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECG 174
+ ++ +V S SF AL + + G Q+HC + G +V T+L+SMY +CG
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG 321
Query: 175 DSESARRVFDEMPEPNVVTWNAAVTA-------------------------CFRCGDVAG 209
A VF + + + WNA V A F +V
Sbjct: 322 MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 210 ARGVFG-------------RMPVRNLTSW-NVMLAGYTKAGELGLARRVFSEMPLKDDVS 255
V G + P+++ ++ + +L Y+K G A VF M KD V+
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVA 441
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELL--REGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
W ++I GL NG F +A F ++ + ++P+ +T V +ACA A FG +HG
Sbjct: 442 WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGS 501
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEE 373
M K+G + V ++LID YSKCG MA VF +MS ++V+W S+I+ + + E
Sbjct: 502 MIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST-ENMVAWNSMISCYSRNNLPEL 560
Query: 374 ALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMV 433
++ LF+ M G+ PD ++ S+L A S + + +G + L GI ++
Sbjct: 561 SIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL-GIPSDTHLKNALI 619
Query: 434 DLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGN 473
D+Y + K E I + + + W ++ HG+
Sbjct: 620 DMYVKCG-FSKYAENIFKKMQHKSLITWNLMIYGYGSHGD 658
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/503 (26%), Positives = 218/503 (43%), Gaps = 60/503 (11%)
Query: 29 SLLSKCSSLKPT---KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFP 85
SLL CS+L K IH + V G P F L++ V L YA+++F +
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDP-FIATSLVNMYVKCG-FLDYAVQVFDGWS 122
Query: 86 NP-------DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
D ++N++I F +M V PD+FS + + +
Sbjct: 123 QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG-VRPDAFSLSIVVSVMCKE 181
Query: 139 GSLK--PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE-PNVVTWN 195
G+ + G Q+H R+ DT F+ T LI MY + G S A RVF E+ + NVV WN
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 196 AAVTA------CFRCGDV----------------AGARGV--------FGRMPVRNLTSW 225
+ C D+ GA G FGR ++
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 226 NV---------MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
+ +L+ Y+K G +G A VFS + K W+ M+ A N A F
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
+ ++ + P+ +L+ V+S C+ G +GK +H + K S++ +AL+ YSKC
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKC 421
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM--EESGVRPDGITFI 394
G A LVF++M + +V+W S+I+GL +G +EAL++F +M ++ ++PD
Sbjct: 422 GCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 395 SLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI 454
S+ AC+ + G ++ M G+ + ++DLY + A + M
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS- 538
Query: 455 SPNAVIWRTLLGACSIHGNIELA 477
+ N V W +++ S + EL+
Sbjct: 539 TENMVAWNSMISCYSRNNLPELS 561
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 179/426 (42%), Gaps = 54/426 (12%)
Query: 126 FSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDE 185
F+F LK + +L G +H G+ F+ T+L++MY +CG + A +VFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 186 MPEP-------NVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLT----SWNVMLAGYTK 234
+ +V WN+ + F+ G F RM V + S +++++ K
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 235 AG----------------------------------ELGL---ARRVFSEMPLKDDVS-W 256
G + GL A RVF E+ K +V W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 257 STMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEK 316
+ MIVG +G + + + ++ S TG L AC+Q+ S FG+ +H + K
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 317 SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQ 376
G V +L+ YSKCG V A+ VF + V + + W +++A A + +G AL
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV-VDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 377 LFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM-KNLYGIEPTIEHYGCMVDL 435
LF M + V PD T +++ CS GL G + +++ K TIE ++ L
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTL 417
Query: 436 YGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDH 495
Y + AY M + V W +L+ +G + A V + + D + D
Sbjct: 418 YSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 496 VLLSNV 501
++++V
Sbjct: 477 DIMTSV 482
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 113/285 (39%), Gaps = 42/285 (14%)
Query: 29 SLLSKCSSLKPTK---QIHTHLYVTGLHTHPLFFGKLLL----HCAVTISDALHYALRLF 81
S+ + C+ L+ + Q+H + TGL + +F G L+ C + AL++F
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKTGLVLN-VFVGSSLIDLYSKCGLP-----EMALKVF 534
Query: 82 QHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSL 141
+ +N++I F M +FPDS S L +++ SL
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-IFPDSVSITSVLVAISSTASL 593
Query: 142 KPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTAC 201
G LH R G + + LI MY +CG S+ A +F +M +++TWN +
Sbjct: 594 LKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGY 653
Query: 202 FRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIV 261
GD A +F M KAGE DDV++ ++I
Sbjct: 654 GSHGDCITALSLFDEMK---------------KAGE------------SPDDVTFLSLIS 686
Query: 262 GLAHNGSFDQAFGFFRELLRE-GIRPNEVSLTGVLSACAQAGASE 305
H+G ++ F + ++ GI PN ++ +AG E
Sbjct: 687 ACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLE 731
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 16/218 (7%)
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRP---NEVSLTGVLSACAQAGASEFGKILHGFMEK 316
I L G + QA + + +G P + + +L AC+ +GK +HG +
Sbjct: 31 IRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVV 88
Query: 317 SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVS------WTSIIAGLAMHGH 370
G+ Y + +L++ Y KCG + A VF S +S VS W S+I G
Sbjct: 89 LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRR 148
Query: 371 GEEALQLFHEMEESGVRPDGITF-ISLLYACSHSGL-VEQGCEIFSKM-KNLYGIEPTIE 427
+E + F M GVRPD + I + C E+G +I M +N + ++
Sbjct: 149 FKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLK 208
Query: 428 HYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL 465
++D+Y + A+ ++ N V+W ++
Sbjct: 209 T--ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 179/625 (28%), Positives = 274/625 (43%), Gaps = 88/625 (14%)
Query: 29 SLLSKCSSLKP---TKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFP 85
SLLS C ++ Q+H H +G+ H + KL VT A +
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKL-----VTFYSAFNLHNEAQSIIE 102
Query: 86 NPDTFM---YNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLK 142
N D +N LI + +M + PD+F++ LK +
Sbjct: 103 NSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVS-KGIRPDAFTYPSVLKACGETLDVA 161
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT--- 199
G +H + + ++V LISMY + ARR+FD M E + V+WNA +
Sbjct: 162 FGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA 221
Query: 200 --------------------------------ACFRCGDVAGARGVFGRM--------PV 219
C + G+ GA G+ RM PV
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPV 281
Query: 220 RNLTSW-------------------------------NVMLAGYTKAGELGLARRVFSEM 248
+ N ++ Y+K +L A VF +
Sbjct: 282 AMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQT 341
Query: 249 PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK 308
+W+++I G A ++A RE+L G +PN ++L +L CA+ + GK
Sbjct: 342 EENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
Query: 309 ILHGF-MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAM 367
H + + + F + + N+L+D Y+K G + A+ V MS R V++TS+I G
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGN 460
Query: 368 HGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIE 427
G G AL LF EM SG++PD +T +++L ACSHS LV +G +F KM+ YGI P ++
Sbjct: 461 QGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQ 520
Query: 428 HYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEM 487
H+ CMVDLYGRA L KA + I MP P+ W TLL AC IHGN ++ + +L EM
Sbjct: 521 HFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEM 580
Query: 488 DPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKP 547
P N G +VL++N+YA AG W + +R M + + K PG + I+ + F G+
Sbjct: 581 KPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTS 640
Query: 548 NEVTEEAHDKLREIMLRLRAEAGYA 572
+ + L + ++ AGYA
Sbjct: 641 SPEACNTYPLLDGLNQLMKDNAGYA 665
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 165/551 (29%), Positives = 265/551 (48%), Gaps = 51/551 (9%)
Query: 27 WVSLLSKCS---SLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQH 83
+ SLL C+ S Q H H+ +GL T G LL + + R+F
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDR-NVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 84 FPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKP 143
D + +++ F++M + + F+ + A+K + G ++
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG-LDANEFTLSSAVKACSELGEVRL 181
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV----- 198
G H HGF+ + F+ +TL +YG + ARRVFDEMPEP+V+ W A +
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 199 -------------------------------TACFRCGDVAGARGVFGRMPVRNLTSWNV 227
TAC + + + G++ + S V
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 228 ----MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREG 283
+L Y K G + AR+VF+ M K+ VSWS ++ G NG ++A FRE+ +
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKD 361
Query: 284 IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQ 343
+ VL ACA A GK +HG + G V +ALID Y K G + A
Sbjct: 362 L----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 344 LVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHS 403
V+ MS+ R++++W ++++ LA +G GEEA+ F++M + G++PD I+FI++L AC H+
Sbjct: 418 RVYSKMSI-RNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHT 476
Query: 404 GLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRT 463
G+V++G F M YGI+P EHY CM+DL GRA +A + + +A +W
Sbjct: 477 GMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 464 LLGACSIHGNI-ELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQS 522
LLG C+ + + +AE + R+ E++P +VLLSN+Y G+ D ++IR+ M +
Sbjct: 537 LLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRG 596
Query: 523 MVKTPGWSMIE 533
+ KT G S I+
Sbjct: 597 VAKTVGQSWID 607
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 210/386 (54%), Gaps = 1/386 (0%)
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDV 207
H FR F +V ++I Y + GD SAR +FD+M + + ++WN + +
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 208 AGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNG 267
A +F MP R+ SWN+M++GY G + LAR F + P K VSW+++I N
Sbjct: 329 EDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 268 SFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN 327
+ +A F + EG +P+ +LT +LSA G +H + K+ + V+N
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHN 447
Query: 328 ALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVR 387
ALI YS+CG + ++ +F M + R +++W ++I G A HG+ EAL LF M+ +G+
Sbjct: 448 ALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIY 507
Query: 388 PDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYE 447
P ITF+S+L AC+H+GLV++ F M ++Y IEP +EHY +V++ + +A
Sbjct: 508 PSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMY 567
Query: 448 FICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGK 507
I MP P+ +W LL AC I+ N+ LA + ++ ++P +S +VLL N+YA G
Sbjct: 568 IITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGL 627
Query: 508 WKDVVSIRRTMTEQSMVKTPGWSMIE 533
W + +R M + + K G S ++
Sbjct: 628 WDEASQVRMNMESKRIKKERGSSWVD 653
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 174/385 (45%), Gaps = 43/385 (11%)
Query: 164 TTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDV---AGARGVFGRMPVR 220
T+IS Y + + AR++FD MP+ +VVTWN ++ CG + AR +F MP R
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR 134
Query: 221 NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELL 280
+ SWN M++GY K +G A +F +MP ++ VSWS MI G NG D A FR++
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 281 REGIRPNEVSLTGVLSACAQAGAS----EFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
+ P + G++ + A+ ++G ++ G + +Y N LI Y +
Sbjct: 195 VKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSG---REDLVY---AYNTLIVGYGQR 248
Query: 337 GNVAMAQLVFRNM--------------SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
G V A+ +F + +++VSW S+I G A LF +M+
Sbjct: 249 GQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK 308
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
+ D I++ +++ H +E +FS+M N + MV Y +
Sbjct: 309 DR----DTISWNTMIDGYVHVSRMEDAFALFSEMPN-----RDAHSWNMMVSGYASVGNV 359
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVY 502
A + + P + V W +++ A + + + A + R+ ++ H L S +
Sbjct: 360 ELARHYFEKTP-EKHTVSWNSIIAAYEKNKDYKEAVDLFIRM-NIEGEKPDPHTLTSLLS 417
Query: 503 AVAGKWKDVVSIRRTMT-EQSMVKT 526
A G +V++R M Q +VKT
Sbjct: 418 ASTG----LVNLRLGMQMHQIVVKT 438
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 160/392 (40%), Gaps = 81/392 (20%)
Query: 160 VFVGTTLISMYGECGDS---ESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGR 216
V T+IS Y CG E AR++FDEMP + +WN ++ + + A +F +
Sbjct: 102 VVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEK 161
Query: 217 MPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKD------------------DVSW-- 256
MP RN SW+ M+ G+ + GE+ A +F +MP+KD + +W
Sbjct: 162 MPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVL 221
Query: 257 -----------------STMIVGLAHNGSFDQAFGFFREL-----------LREGIRPNE 288
+T+IVG G + A F ++ RE N
Sbjct: 222 GQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNV 281
Query: 289 VSLTGVLSACAQAGASEFGKILHGFMEK----------SGFLYISSVNNA---------- 328
VS ++ A + G ++L M+ G++++S + +A
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR 341
Query: 329 -------LIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
++ Y+ GNV +A+ F + + VSW SIIA + +EA+ LF M
Sbjct: 342 DAHSWNMMVSGYASVGNVELARHYFEK-TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM 400
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR 441
G +PD T SLL A +GLV + + + P + + ++ +Y R
Sbjct: 401 NIEGEKPDPHTLTSLLSAS--TGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGE 458
Query: 442 LHKAYEFICQMPISPNAVIWRTLLGACSIHGN 473
+ ++ +M + + W ++G + HGN
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 27/315 (8%)
Query: 179 ARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGEL 238
AR +F+++ N VTWN ++ + ++ AR +F MP R++ +WN M++GY G +
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGI 118
Query: 239 GL---ARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
AR++F EMP +D SW+TMI G A N +A F ++ N VS + ++
Sbjct: 119 RFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMI 174
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRS- 354
+ Q G + +L M + ++ LI + A + ++ GR
Sbjct: 175 TGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKN-ERLSEAAWVLGQYGSLVSGRED 233
Query: 355 -IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDG-----------ITFISLLYACSH 402
+ ++ ++I G G E A LF ++ + G +++ S++ A
Sbjct: 234 LVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLK 293
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWR 462
G V +F +MK+ I + M+D Y +R+ A+ +MP + +A W
Sbjct: 294 VGDVVSARLLFDQMKDRDTIS-----WNTMIDGYVHVSRMEDAFALFSEMP-NRDAHSWN 347
Query: 463 TLLGACSIHGNIELA 477
++ + GN+ELA
Sbjct: 348 MMVSGYASVGNVELA 362
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 127/309 (41%), Gaps = 56/309 (18%)
Query: 195 NAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV 254
N + R G +A AR +F ++ RN +WN M++GY K E+ AR++F MP +D V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM 314
+W+TMI G G GIR E E K+
Sbjct: 104 TWNTMISGYVSCG---------------GIRFLE----------------EARKLFDEMP 132
Query: 315 EKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEA 374
+ F + N +I Y+K + A L+F M R+ VSW+++I G +G + A
Sbjct: 133 SRDSFSW-----NTMISGYAKNRRIGEALLLFEKMP-ERNAVSWSAMITGFCQNGEVDSA 186
Query: 375 LQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLY-GIEPTIEHYGCMV 433
+ LF +M P +L+ + + + + + +L G E + Y ++
Sbjct: 187 VVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLI 242
Query: 434 DLYGRAARLHKAYEFICQMP--------------ISPNAVIWRTLLGACSIHGNIELAEL 479
YG+ ++ A Q+P N V W +++ A G++ A L
Sbjct: 243 VGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARL 302
Query: 480 VKARLAEMD 488
+ ++ + D
Sbjct: 303 LFDQMKDRD 311
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 229/447 (51%), Gaps = 38/447 (8%)
Query: 91 MYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQ 150
+YNTLIR F M V P++ +F +K + S+ G LH Q
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLA-SHVQPNNLTFPSLIKAACSSFSVSYGVALHGQ 111
Query: 151 AFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGA 210
A + GF FV T+ + YGE GD ES+R++FD++ P VV N+ + AC R
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGR------- 164
Query: 211 RGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFD 270
GE+ A F MP+ D VSW+T+I G + G
Sbjct: 165 ------------------------NGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA 200
Query: 271 QAFGFFRELL---REGIRPNEVSLTGVLSACAQ--AGASEFGKILHGFMEKSGFLYISSV 325
+A F E++ R I PNE + VLS+CA G GK +HG++ + +++
Sbjct: 201 KALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTL 260
Query: 326 NNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG 385
AL+D Y K G++ MA +F + + + +W +II+ LA +G ++AL++F M+ S
Sbjct: 261 GTALLDMYGKAGDLEMALTIFDQIR-DKKVCAWNAIISALASNGRPKQALEMFEMMKSSY 319
Query: 386 VRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKA 445
V P+GIT +++L AC+ S LV+ G ++FS + + Y I PT EHYGC+VDL GRA L A
Sbjct: 320 VHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDA 379
Query: 446 YEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVA 505
FI +P P+A + LLGAC IH N EL V +L + P + G +V LS A+
Sbjct: 380 ANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALD 439
Query: 506 GKWKDVVSIRRTMTEQSMVKTPGWSMI 532
W + +R+ M E + K P +S++
Sbjct: 440 SNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 109/282 (38%), Gaps = 25/282 (8%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQM--RRHPTVFPDSFSFAFA 131
+ YA FQ P D + T+I F +M + P+ +F
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 132 LKGVAN--GGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEP 189
L AN G ++ G Q+H +GT L+ MYG+ GD E A +FD++ +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 190 NVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVF 245
V WNA ++A G A +F M N + +L ++ + L ++F
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Query: 246 SE-------MPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC 298
S +P + ++G A G A F + L E P+ L +L AC
Sbjct: 348 SSICSEYKIIPTSEHYGCVVDLIGRA--GLLVDAANFIQSLPFE---PDASVLGALLGAC 402
Query: 299 AQAGASEF----GKILHGFMEKSGFLYIS-SVNNALIDTYSK 335
+E GK L G + Y++ S NAL +S+
Sbjct: 403 KIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSE 444
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/553 (29%), Positives = 272/553 (49%), Gaps = 43/553 (7%)
Query: 57 LFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMR 116
L+ G L++ + + ALR+F PD +++++ F +M
Sbjct: 96 LYVGSSLIYMYIKCGRMIE-ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 117 RHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDS 176
V PD + + + + G +H R GF + + +L++ Y +
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214
Query: 177 ESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM----PVRNLTSWNVMLAGY 232
+ A +F + E +V++W+ + + G A A VF M N+ + +L
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC 274
Query: 233 TKAGELGLARR-----------------------------------VFSEMPLKDDVSWS 257
A +L R+ VFS +P KD VSW
Sbjct: 275 AAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWV 334
Query: 258 TMIVGLAHNGSFDQAFGFFRELLREG-IRPNEVSLTGVLSACAQAGASEFGKILHGFMEK 316
+I G NG ++ F +L E RP+ + + VL +C++ G E K H ++ K
Sbjct: 335 ALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK 394
Query: 317 SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQ 376
GF + +L++ YS+CG++ A VF +++ ++V WTS+I G +HG G +AL+
Sbjct: 395 YGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV-WTSLITGYGIHGKGTKALE 453
Query: 377 LF-HEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDL 435
F H ++ S V+P+ +TF+S+L ACSH+GL+ +G IF M N Y + P +EHY +VDL
Sbjct: 454 TFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDL 513
Query: 436 YGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDH 495
GR L A E +MP SP I TLLGAC IH N E+AE V +L E++ N++G +
Sbjct: 514 LGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYY 573
Query: 496 VLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAH 555
+L+SNVY V G+W++V +R ++ ++ + K S+IEI + ++ FVA ++ + E +
Sbjct: 574 MLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVY 633
Query: 556 DKLREIMLRLRAE 568
L+E+ L ++ +
Sbjct: 634 GLLKELDLHMKED 646
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 241 ARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQ 300
AR++F EM + W+T++ L+ +++ F + R+ +P+ +L L AC +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 301 AGASEFGKILHGFMEKS----GFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIV 356
+G+++HGF++K LY+ S +LI Y KCG + A +F + IV
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGS---SLIYMYIKCGRMIEALRMFDELE-KPDIV 128
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEM-EESGVRPDGITFISLLYACS 401
+W+S+++G +G +A++ F M S V PD +T I+L+ AC+
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 162/557 (29%), Positives = 261/557 (46%), Gaps = 49/557 (8%)
Query: 23 LEPRWVSLLSKCSSLKPTKQI---HTHLYVTGLHTHPLFFGKLL-LHCAVTISDALHYAL 78
++P V+LL S + Q+ H + G +L L+C D + A
Sbjct: 143 IKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKC---DHVGDAK 199
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
LF D +NT+I +MR + PD +F +L
Sbjct: 200 DLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG-DGLRPDQQTFGASLSVSGTM 258
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
L+ G LHCQ + GFD + + T LI+MY +CG E++ RV + +P +VV W +
Sbjct: 259 CDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMI 318
Query: 199 TACFRCGDVAGARGVFGRMP---------------------------------------V 219
+ R G A VF M
Sbjct: 319 SGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYT 378
Query: 220 RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL 279
+ + N ++ Y K G L + +F M +D VSW+ +I G A N +A F E+
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Query: 280 LREGIRP-NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGN 338
+ ++ + ++ +L AC+ AGA GK++H + +S S V+ AL+D YSKCG
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGY 498
Query: 339 VAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLY 398
+ AQ F ++S + +VSW +IAG HG G+ AL+++ E SG+ P+ + F+++L
Sbjct: 499 LEAAQRCFDSIS-WKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLS 557
Query: 399 ACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNA 458
+CSH+G+V+QG +IFS M +G+EP EH C+VDL RA R+ A++F + P+
Sbjct: 558 SCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSI 617
Query: 459 VIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTM 518
+ +L AC +G E+ +++ + E+ P ++G +V L + +A +W DV M
Sbjct: 618 DVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQM 677
Query: 519 TEQSMVKTPGWSMIEIN 535
+ K PGWS IE+N
Sbjct: 678 RSLGLKKLPGWSKIEMN 694
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 167/380 (43%), Gaps = 42/380 (11%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
+ PD+F+F LK A+ L G +H Q +GF + ++ ++L+++Y + G AR
Sbjct: 42 LLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHAR 101
Query: 181 RVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM--------PVR------------ 220
+VF+EM E +VV W A + R G V A + M PV
Sbjct: 102 KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEIT 161
Query: 221 ----------------NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
++ N ML Y K +G A+ +F +M +D VSW+TMI G A
Sbjct: 162 QLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYA 221
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
G+ + + +G+RP++ + LS E G++LH + K+GF
Sbjct: 222 SVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMH 281
Query: 325 VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES 384
+ ALI Y KCG + V + + +V WT +I+GL G E+AL +F EM +S
Sbjct: 282 LKTALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQS 340
Query: 385 GVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHK 444
G S++ +C+ G + G + + +G ++ +Y + L K
Sbjct: 341 GSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR-HGYTLDTPALNSLITMYAKCGHLDK 399
Query: 445 AYEFICQMP----ISPNAVI 460
+ +M +S NA+I
Sbjct: 400 SLVIFERMNERDLVSWNAII 419
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 151/337 (44%), Gaps = 26/337 (7%)
Query: 174 GDSESARRVFDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS----W 225
GD + F M P+ T+ + + AC ++ + ++ V +S
Sbjct: 25 GDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYIS 84
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
+ ++ Y K G L AR+VF EM +D V W+ MI + G +A E+ +GI+
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 286 PNEVSLTGVLSACAQAGASEFGKI--LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQ 343
P V+L +LS G E ++ LH F GF +V N++++ Y KC +V A+
Sbjct: 145 PGPVTLLEMLS-----GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAK 199
Query: 344 LVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHS 403
+F M R +VSW ++I+G A G+ E L+L + M G+RPD TF + L
Sbjct: 200 DLFDQME-QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTM 258
Query: 404 GLVEQG----CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAV 459
+E G C+I G + + ++ +Y + + +Y + +P + + V
Sbjct: 259 CDLEMGRMLHCQIVKT-----GFDVDMHLKTALITMYLKCGKEEASYRVLETIP-NKDVV 312
Query: 460 IWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHV 496
W ++ G E A +V + + + + S + +
Sbjct: 313 CWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAI 349
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 10/220 (4%)
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
L+ +G Q F +L + P+ + +L ACA FG +H + +GF
Sbjct: 21 LSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSD 80
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
++++L++ Y+K G +A A+ VF M R +V WT++I + G EA L +EM
Sbjct: 81 FYISSSLVNLYAKFGLLAHARKVFEEMR-ERDVVHWTAMIGCYSRAGIVGEACSLVNEMR 139
Query: 383 ESGVRPDGITFISLLYACSHSGLVE-QGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR 441
G++P +T + +L SG++E + +YG + I M++LY +
Sbjct: 140 FQGIKPGPVTLLEML-----SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDH 194
Query: 442 LHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVK 481
+ A + QM + V W T++ + GN ++E++K
Sbjct: 195 VGDAKDLFDQME-QRDMVSWNTMISGYASVGN--MSEILK 231
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 270/527 (51%), Gaps = 27/527 (5%)
Query: 43 IHTHLYVTGLHTHPLFFGKLLLHCAVTISDALH---------YALRLFQHFPNPDTFMYN 93
I ++ G+ L FG + VT + ++ A RLF P + +
Sbjct: 207 IKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWT 266
Query: 94 TLIRXXXXXXXXXXXXHPFIQMRRH-PTVFPDS---FSFAFALKGVANGGSLKPGTQLHC 149
+I F++M++ V P+ S A+A G+ + G QLH
Sbjct: 267 AMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFR-RLGEQLHA 325
Query: 150 QAFRHGFDTHVFVG---TTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
Q +G++T G +L+ MY G SA+ + +E ++ + N + + GD
Sbjct: 326 QVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNIIINRYLKNGD 383
Query: 207 VAGARGVFGRMP-VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH 265
+ A +F R+ + + SW M+ GY +AG++ A +F ++ KD V+W+ MI GL
Sbjct: 384 LERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQ 443
Query: 266 NGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSV 325
N F +A +++R G++P + + +LS+ + GK +H + K+ Y +
Sbjct: 444 NELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDL 503
Query: 326 --NNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE 383
N+L+ Y+KCG + A +F M V + VSW S+I GL+ HG ++AL LF EM +
Sbjct: 504 ILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLD 562
Query: 384 SGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLH 443
SG +P+ +TF+ +L ACSHSGL+ +G E+F MK Y I+P I+HY M+DL GRA +L
Sbjct: 563 SGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLK 622
Query: 444 KAYEFICQMPISPNAVIWRTLLGACSIHGNIE----LAELVKARLAEMDPNNSGDHVLLS 499
+A EFI +P +P+ ++ LLG C ++ + +AE RL E+DP N+ HV L
Sbjct: 623 EAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALC 682
Query: 500 NVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEK 546
NVYA G+ +R+ M + + KTPG S + +N F++G+K
Sbjct: 683 NVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDK 729
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 142/279 (50%), Gaps = 13/279 (4%)
Query: 129 AFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE 188
A L+ ++ GG L L + + G V T+L+S Y + G + AR +F+ MPE
Sbjct: 47 ALILRRLSEGG-LVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPE 105
Query: 189 PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEM 248
N+VT NA +T +C + A +F MP +N+ SW VML G A +F EM
Sbjct: 106 RNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEM 164
Query: 249 PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK 308
P ++ VSW+T++ GL NG ++A F + + VS ++ + E K
Sbjct: 165 PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIENDGMEEAK 220
Query: 309 ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMH 368
+L G M + + +S ++ Y + G+V A +F M R+IVSWT++I+G A +
Sbjct: 221 LLFGDMSEKNVVTWTS----MVYGYCRYGDVREAYRLFCEMP-ERNIVSWTAMISGFAWN 275
Query: 369 GHGEEALQLFHEMEE--SGVRPDGITFISLLYACSHSGL 405
EAL LF EM++ V P+G T ISL YAC G+
Sbjct: 276 ELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 173/402 (43%), Gaps = 77/402 (19%)
Query: 159 HVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP 218
+V T +++ + G SE A +FDEMPE NVV+WN VT R GD+ A+ VF MP
Sbjct: 137 NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMP 196
Query: 219 VRNLTSWNVMLAGYT-------------------------------KAGELGLARRVFSE 247
R++ SWN M+ GY + G++ A R+F E
Sbjct: 197 SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCE 256
Query: 248 MPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR--EGIRPNEVSLTGVLSACAQAGAS- 304
MP ++ VSW+ MI G A N + +A F E+ + + + PN +L + AC G
Sbjct: 257 MPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEF 316
Query: 305 -EFGKILHGFMEKSGF---------------LYISS---------VN--------NALID 331
G+ LH + +G+ +Y SS +N N +I+
Sbjct: 317 RRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIIN 376
Query: 332 TYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGI 391
Y K G++ A+ +F + VSWTS+I G G A LF ++ + DG+
Sbjct: 377 RYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD----KDGV 432
Query: 392 TFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQ 451
T+ ++ + L + + S M G++P Y ++ G + L + C
Sbjct: 433 TWTVMISGLVQNELFAEAASLLSDMVRC-GLKPLNSTYSVLLSSAGATSNLDQGKHIHCV 491
Query: 452 MPIS-----PNAVIWRTLLGACSIHGNIELAELVKARLAEMD 488
+ + P+ ++ +L+ + G IE A + A++ + D
Sbjct: 492 IAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD 533
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 225/500 (45%), Gaps = 43/500 (8%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A +F N D +NT+I F M + +V D + L
Sbjct: 171 ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV-NESVDLDHATIVSMLPVCG 229
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
+ L+ G +H + V L++MY +CG + AR VFD M +V+TW
Sbjct: 230 HLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTC 289
Query: 197 AVTACFRCGDVAGARGVFGRMPV--------------------------RNLTSWNV--- 227
+ GDV A + M + L W V
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 228 ----------MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFR 277
+++ Y K + L RVFS WS +I G N A G F+
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFK 409
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG 337
+ RE + PN +L +L A A +H ++ K+GF+ L+ YSKCG
Sbjct: 410 RMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 338 NVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFI 394
+ A +F + + +V W ++I+G MHG G ALQ+F EM SGV P+ ITF
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFT 529
Query: 395 SLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI 454
S L ACSHSGLVE+G +F M Y HY C+VDL GRA RL +AY I +P
Sbjct: 530 SALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPF 589
Query: 455 SPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSI 514
P + +W LL AC H N++L E+ +L E++P N+G++VLL+N+YA G+WKD+ +
Sbjct: 590 EPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKV 649
Query: 515 RRTMTEQSMVKTPGWSMIEI 534
R M + K PG S IEI
Sbjct: 650 RSMMENVGLRKKPGHSTIEI 669
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 142/337 (42%), Gaps = 45/337 (13%)
Query: 115 MRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHG-FDTHVFVGTTLISMYGEC 173
+RR + L A S+ LHC G H+ +TL Y C
Sbjct: 5 LRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHIL--STLSVTYALC 62
Query: 174 GDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV-------------- 219
G AR++F+EMP+ +++++N + R G A VF RM
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 220 -------------------RNLTSW--------NVMLAGYTKAGELGLARRVFSEMPLKD 252
R L SW N +LA Y G++ +AR VF M +D
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 253 DVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHG 312
+SW+TMI G NG + A F ++ E + + ++ +L C E G+ +H
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 313 FMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGE 372
+E+ V NAL++ Y KCG + A+ VF M R +++WT +I G G E
Sbjct: 243 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDGDVE 301
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQG 409
AL+L M+ GVRP+ +T SL+ C + V G
Sbjct: 302 NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 5/248 (2%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR--PNEV 289
Y G + AR++F EMP +S++ +I G + A F ++ EG++ P+
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 290 SLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM 349
+ V A + + + G ++HG + +S F V NAL+ Y G V MA+ VF M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 350 SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQG 409
R ++SW ++I+G +G+ +AL +F M V D T +S+L C H +E G
Sbjct: 179 K-NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 410 CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACS 469
+ K+ + IE +V++Y + R+ +A F+ + + W ++ +
Sbjct: 238 RNV-HKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA-RFVFDRMERRDVITWTCMINGYT 295
Query: 470 IHGNIELA 477
G++E A
Sbjct: 296 EDGDVENA 303
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 265/532 (49%), Gaps = 42/532 (7%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A F+ P++ +N LI M V D+ +FA L +
Sbjct: 155 AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLD 214
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP-EPNVVTWN 195
+ Q+H + + G + + +IS Y +CG A+RVFD + ++++WN
Sbjct: 215 DPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWN 274
Query: 196 AAVTACFR--------------------------CGDVAGARG----VFGR----MPVRN 221
+ + + G ++ G +FG+ M ++
Sbjct: 275 SMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKK 334
Query: 222 -----LTSWNVMLAGYTK--AGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFG 274
++ N +++ Y + G + A +F + KD +SW+++I G A G + A
Sbjct: 335 GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVK 394
Query: 275 FFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYS 334
FF L I+ ++ + + +L +C+ + G+ +H KSGF+ V ++LI YS
Sbjct: 395 FFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYS 454
Query: 335 KCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFI 394
KCG + A+ F+ +S S V+W ++I G A HG G+ +L LF +M V+ D +TF
Sbjct: 455 KCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFT 514
Query: 395 SLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI 454
++L ACSH+GL+++G E+ + M+ +Y I+P +EHY VDL GRA ++KA E I MP+
Sbjct: 515 AILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPL 574
Query: 455 SPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSI 514
+P+ ++ +T LG C G IE+A V L E++P + +V LS++Y+ KW++ S+
Sbjct: 575 NPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASV 634
Query: 515 RRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLR 566
++ M E+ + K PGWS IEI + F A ++ N + ++ + ++++ ++
Sbjct: 635 KKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 211/472 (44%), Gaps = 50/472 (10%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALK 133
L YA LF P D+ +NT+I F M+R + D +SF+ LK
Sbjct: 51 LGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDV-DGYSFSRLLK 109
Query: 134 GVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVT 193
G+A+ G Q+H + G++ +V+VG++L+ MY +C E A F E+ EPN V+
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 194 WNAAVTACFRCGDVAGARGVFGRMPVR--------------------------------- 220
WNA + + D+ A + G M ++
Sbjct: 170 WNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKV 229
Query: 221 -------NLTSWNVMLAGYTKAGELGLARRVFSEM-PLKDDVSWSTMIVGLAHNGSFDQA 272
+T N M++ Y G + A+RVF + KD +SW++MI G + + + A
Sbjct: 230 LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESA 289
Query: 273 FGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDT 332
F F ++ R + + + TG+LSAC+ FGK LHG + K G ++S NALI
Sbjct: 290 FELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISM 349
Query: 333 YSK--CGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDG 390
Y + G + A +F ++ + ++SW SII G A G E+A++ F + S ++ D
Sbjct: 350 YIQFPTGTMEDALSLFESLK-SKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDD 408
Query: 391 ITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFIC 450
F +LL +CS ++ G +I + + G ++ +Y + + A +
Sbjct: 409 YAFSALLRSCSDLATLQLGQQIHA-LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQ 467
Query: 451 QMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEM-DPNNSGDHVLLSNV 501
Q+ + V W ++ + HG L ++ ++M + N DHV + +
Sbjct: 468 QISSKHSTVAWNAMILGYAQHG---LGQVSLDLFSQMCNQNVKLDHVTFTAI 516
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 40/294 (13%)
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDV 207
HC A + G + ++V ++ Y + G A +FDEMP+ + V+WN ++ CG +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 208 AGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRV------------------- 244
A +F M + S++ +L G L +V
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 245 ----------------FSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL-LREGIRPN 287
F E+ + VSW+ +I G AF + ++ + +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR 347
+ +L+ K +H + K G + ++ NA+I +Y+ CG+V+ A+ VF
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 348 NMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
+ + ++SW S+IAG + H E A +LF +M+ V D T+ LL ACS
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 3/247 (1%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N +L Y K G LG A +F EMP +D VSW+TMI G G + A+ F + R G
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
+ S + +L A + G+ +HG + K G+ V ++L+D Y+KC V A
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME-ESGVRPDGITFISLLYACSHSG 404
F+ +S S VSW ++IAG + A L ME ++ V D TF LL
Sbjct: 159 FKEISEPNS-VSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPM 217
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
++ +K+ L G++ I M+ Y + A + S + + W ++
Sbjct: 218 FCNLLKQVHAKVLKL-GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSM 276
Query: 465 LGACSIH 471
+ S H
Sbjct: 277 IAGFSKH 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 309 ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMH 368
+ H + K G + V+N ++D+Y K G + A ++F M R VSW ++I+G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMP-KRDSVSWNTMISGYTSC 79
Query: 369 GHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEH 428
G E+A LF M+ SG DG +F LL + + G ++ + G E +
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIK-GGYECNVYV 138
Query: 429 YGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLG 466
+VD+Y + R+ A+E ++ PN+V W L+
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIA 175
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/431 (31%), Positives = 220/431 (51%), Gaps = 40/431 (9%)
Query: 141 LKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA 200
L G Q+H + G + VG++L ++Y +CG E + ++F +P + W + ++
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525
Query: 201 CFRCGDVAGARGVFGRMPVRNLTSWNVMLAG----------------------------- 231
G + A G+F M + LA
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG 585
Query: 232 ----------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR 281
Y+K G L LAR+V+ +P D VS S++I G + +G F FR+++
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM 645
Query: 282 EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
G + +++ +L A A + S G +H ++ K G SV ++L+ YSK G++
Sbjct: 646 SGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD 705
Query: 342 AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
F ++ G +++WT++IA A HG EALQ+++ M+E G +PD +TF+ +L ACS
Sbjct: 706 CCKAFSQIN-GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS 764
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIW 461
H GLVE+ + M YGIEP HY CMVD GR+ RL +A FI M I P+A++W
Sbjct: 765 HGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVW 824
Query: 462 RTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ 521
TLL AC IHG +EL ++ + E++P+++G ++ LSN+ A G+W +V R+ M
Sbjct: 825 GTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGT 884
Query: 522 SMVKTPGWSMI 532
+ K PGWS +
Sbjct: 885 GVQKEPGWSSV 895
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 117/522 (22%), Positives = 198/522 (37%), Gaps = 69/522 (13%)
Query: 32 SKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFM 91
S+ +L+ TK + HL L +F K LL + S ++ A +LF P PD
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLS-WYSNSGSMADAAKLFDTIPQPDVVS 117
Query: 92 YNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLH--- 148
N +I F +M F ++ G + + L
Sbjct: 118 CNIMISGYKQHRLFEESLRFFSKMHF----------LGFEANEISYGSVISACSALQAPL 167
Query: 149 ------CQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACF 202
C + G+ + V + LI ++ + E A +VF + NV WN +
Sbjct: 168 FSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGAL 227
Query: 203 RCGDVAGARGVFGRMPV----RNLTSWNVMLAG--------------------------- 231
R + +F M V + +++ +LA
Sbjct: 228 RNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFV 287
Query: 232 -------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
Y K G + A VFS +P VSW+ M+ G + A F+E+ G+
Sbjct: 288 CTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGV 347
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
N ++T V+SAC + +H ++ KSGF SSV ALI YSK G++ +++
Sbjct: 348 EINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQ 407
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA--CSH 402
VF ++ + +I + +A++LF M + G+R D + SLL C +
Sbjct: 408 VFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLN 467
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWR 462
G G + S G+ + + LY + L ++Y+ +P NA W
Sbjct: 468 LGKQVHGYTLKS------GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNAC-WA 520
Query: 463 TLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAV 504
+++ + +G L E + +D S D L+ V V
Sbjct: 521 SMISGFNEYG--YLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 173/411 (42%), Gaps = 50/411 (12%)
Query: 29 SLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPD 88
SLLS L KQ+H + +GL L G L + +L + +LFQ P D
Sbjct: 458 SLLSVLDCLNLGKQVHGYTLKSGL-VLDLTVGSSLF-TLYSKCGSLEESYKLFQGIPFKD 515
Query: 89 TFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLH 148
+ ++I F +M T PD + A L ++ SL G ++H
Sbjct: 516 NACWASMISGFNEYGYLREAIGLFSEMLDDGTS-PDESTLAAVLTVCSSHPSLPRGKEIH 574
Query: 149 CQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVA 208
R G D + +G+ L++MY +CG + AR+V+D +PE + V+ ++ ++ + G +
Sbjct: 575 GYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQ 634
Query: 209 GARGVFGRMPVRNLT--SWNV-------------------------------------ML 229
+F M + T S+ + +L
Sbjct: 635 DGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLL 694
Query: 230 AGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEV 289
Y+K G + + FS++ D ++W+ +I A +G ++A + + +G +P++V
Sbjct: 695 TMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKV 754
Query: 290 SLTGVLSACAQAGASEFGKI-LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRN 348
+ GVLSAC+ G E L+ ++ G + ++D + G + A+ N
Sbjct: 755 TFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINN 814
Query: 349 MSVGRSIVSWTSIIAGLAMHGH---GEEALQLFHEMEESGVRPDGITFISL 396
M + + W +++A +HG G+ A + E+E S D +ISL
Sbjct: 815 MHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPS----DAGAYISL 861
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 159/533 (29%), Positives = 246/533 (46%), Gaps = 104/533 (19%)
Query: 4 MSYFIPTPSSGTEEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLL 63
+++F+ T SS +LLS C+SL ++IH ++ +
Sbjct: 27 LNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRS------------- 73
Query: 64 LHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFP 123
R+ +P F++N ++R ++ M R TV P
Sbjct: 74 ---------------RILDQYP--IAFLWNNIMRSYIRHESPLDAIQVYLGMVR-STVLP 115
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D +S +K G +LH A R G FVG
Sbjct: 116 DRYSLPIVIKAAVQIHDFTLGKELHSVAVRLG-----FVG-------------------- 150
Query: 184 DEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARR 243
DE E +T Y KAGE AR+
Sbjct: 151 DEFCESGFITL-------------------------------------YCKAGEFENARK 173
Query: 244 VFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGA 303
VF E P + SW+ +I GL H G ++A F ++ R G+ P++ ++ V ++C G
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGD 233
Query: 304 SEFGKILHGFM------EKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVS 357
LH + EKS + + N+LID Y KCG + +A +F M R++VS
Sbjct: 234 LSLAFQLHKCVLQAKTEEKSDIMML----NSLIDMYGKCGRMDLASHIFEEMR-QRNVVS 288
Query: 358 WTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
W+S+I G A +G+ EAL+ F +M E GVRP+ ITF+ +L AC H GLVE+G F+ MK
Sbjct: 289 WSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMK 348
Query: 418 NLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
+ + +EP + HYGC+VDL R +L +A + + +MP+ PN ++W L+G C G++E+A
Sbjct: 349 SEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Query: 478 ELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWS 530
E V + E++P N G +V+L+NVYA+ G WKDV +R+ M + + K P +S
Sbjct: 409 EWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/323 (42%), Positives = 192/323 (59%), Gaps = 17/323 (5%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH-----NGSFDQAFGFFREL- 279
+L Y K G+L AR+VF EMP + V+W+ MI G N + +A FR
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 280 -LREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSV--NNALIDTYSKC 336
G+RP + ++ VLSA +Q G E G ++HG++EK GF V AL+D YSKC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
G + A VF M V +++ +WTS+ GLA++G G E L + M ESG++P+ ITF SL
Sbjct: 271 GCLNNAFSVFELMKV-KNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSL 329
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISP 456
L A H GLVE+G E+F MK +G+ P IEHYGC+VDL G+A R+ +AY+FI MPI P
Sbjct: 330 LSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKP 389
Query: 457 NAVIWRTLLGACSIHGNIELAELVKARLAEM---DPNNSG----DHVLLSNVYAVAGKWK 509
+A++ R+L ACSI+G + E + L E+ D SG D+V LSNV A GKW
Sbjct: 390 DAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWV 449
Query: 510 DVVSIRRTMTEQSMVKTPGWSMI 532
+V +R+ M E+ + PG+S +
Sbjct: 450 EVEKLRKEMKERRIKTRPGYSFV 472
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 183/443 (41%), Gaps = 67/443 (15%)
Query: 25 PRWVSLLSKCS-SLKPTKQIHTHLYVTGLHTHPLFFGKLLLH-CA--VTISDALHYALRL 80
PR++SLL + S +L KQIH L + G H + LF GKL+ H C+ T S + L +
Sbjct: 8 PRFLSLLQQNSKTLIQAKQIHAQLVINGCHDNSLF-GKLIGHYCSKPSTESSSKLAHLLV 66
Query: 81 FQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFAL---KGVAN 137
F F +PD F++NTL++ + + ++ + +F F L A+
Sbjct: 67 FPRFGHPDKFLFNTLLKCSKPEDSIRIFAN---YASKSSLLYLNERTFVFVLGACARSAS 123
Query: 138 GGSLKPGTQLHCQAFRHGFDTHV-FVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
+L+ G +H + GF +GTTL+ Y + GD AR+VFDEMPE VTWNA
Sbjct: 124 SSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNA 183
Query: 197 AV-----------------TACFR----CGD---------------------------VA 208
+ FR CG V
Sbjct: 184 MIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVH 243
Query: 209 GARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGS 268
G G P ++ ++ Y+K G L A VF M +K+ +W++M GLA NG
Sbjct: 244 GYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGR 303
Query: 269 FDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFG-KILHGFMEKSGFLYISSVNN 327
++ + GI+PNE++ T +LSA G E G ++ + G +
Sbjct: 304 GNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYG 363
Query: 328 ALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH---GEEALQLFHEMEES 384
++D K G + A M + + S+ +++G GEE + E+E
Sbjct: 364 CIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIERE 423
Query: 385 GVRPDGI---TFISLLYACSHSG 404
+ G +++L +H G
Sbjct: 424 DEKLSGSECEDYVALSNVLAHKG 446
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 307 GKILHGFMEKSGFLYISS-VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGL 365
G+I+HG ++K GFLY S + L+ Y+K G++ A+ VF M R+ V+W ++I G
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMP-ERTSVTWNAMIGGY 188
Query: 366 AMHG-----HGEEALQLFHEME--ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
H + +A+ LF SGVRP T + +L A S +GL+E G + ++
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 419 LYGIEPTIEHY--GCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIEL 476
L G P ++ + +VD+Y + L+ A+ M + N W ++ +++G
Sbjct: 249 L-GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLALNGRGNE 306
Query: 477 AELVKARLAE--MDPNNSGDHVLLS 499
+ R+AE + PN LLS
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLS 331
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 217/438 (49%), Gaps = 43/438 (9%)
Query: 25 PRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDAL---HYALRLF 81
P L CS+ KQIHT + H L +LL+ +++S + YA +F
Sbjct: 21 PEASYFLRTCSNFSQLKQIHTKII-----KHNLTNDQLLVRQLISVSSSFGETQYASLVF 75
Query: 82 QHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFI-QMRRHPTVFPDSFSFAFALKGVANGGS 140
+P TF +N +IR FI M H + F D F+F F +K S
Sbjct: 76 NQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF-DKFTFPFVIKACLASSS 134
Query: 141 LKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA 200
++ GTQ+H A + GF VF TL+ +Y
Sbjct: 135 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLY------------------------------ 164
Query: 201 CFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMI 260
F+CG R VF +MP R++ SW ML G +L A VF++MP+++ VSW+ MI
Sbjct: 165 -FKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMI 223
Query: 261 VGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFL 320
N D+AF FR + + ++PNE ++ +L A Q G+ G+ +H + K+GF+
Sbjct: 224 TAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFV 283
Query: 321 YISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLF-H 379
+ ALID YSKCG++ A+ VF M G+S+ +W S+I L +HG GEEAL LF
Sbjct: 284 LDCFLGTALIDMYSKCGSLQDARKVFDVMQ-GKSLATWNSMITSLGVHGCGEEALSLFEE 342
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRA 439
EE+ V PD ITF+ +L AC+++G V+ G F++M +YGI P EH CM+ L +A
Sbjct: 343 MEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQA 402
Query: 440 ARLHKAYEFICQMPISPN 457
+ KA + M P+
Sbjct: 403 LEVEKASNLVESMDSDPD 420
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/326 (39%), Positives = 201/326 (61%), Gaps = 7/326 (2%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N ++ Y + AR+VF EM ++ VSW++++ L NG + F F E++ +
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC 211
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
P+E ++ +LSAC G GK++H + + AL+D Y+K G + A+LV
Sbjct: 212 PDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLV 269
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM-EESGVRPDGITFISLLYACSHSG 404
F M V +++ +W+++I GLA +G EEALQLF +M +ES VRP+ +TF+ +L ACSH+G
Sbjct: 270 FERM-VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTG 328
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
LV+ G + F +M+ ++ I+P + HYG MVD+ GRA RL++AY+FI +MP P+AV+WRTL
Sbjct: 329 LVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTL 388
Query: 465 LGACSIHGNIE---LAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ 521
L ACSIH + + + E VK RL E++P SG+ V+++N +A A W + +RR M E
Sbjct: 389 LSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKET 448
Query: 522 SMVKTPGWSMIEINKVMYGFVAGEKP 547
M K G S +E+ + F +G P
Sbjct: 449 KMKKIAGESCLELGGSFHRFFSGYDP 474
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 181/398 (45%), Gaps = 46/398 (11%)
Query: 30 LLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDT 89
L CSS+K QIH ++++ L +L+ +++++ L +A L H +
Sbjct: 19 FLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTP 78
Query: 90 FMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHC 149
+N L R + +M+R + P+ +F F LK A+ L G Q+
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRG-IKPNKLTFPFLLKACASFLGLTAGRQIQV 137
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA--------- 200
+ +HGFD V+VG LI +YG C + AR+VFDEM E NVV+WN+ +TA
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 201 CFRC------------------------GDVAGARGVFGRMPVR----NLTSWNVMLAGY 232
F C G+++ + V ++ VR N ++ Y
Sbjct: 198 VFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 233 TKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE-GIRPNEVSL 291
K+G L AR VF M K+ +WS MIVGLA G ++A F ++++E +RPN V+
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN-NALIDTYSKCGNVAMAQLVFRNMS 350
GVL AC+ G + G MEK + ++ A++D + G + A + M
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 351 VGRSIVSWTSIIAGLAMH------GHGEEALQLFHEME 382
V W ++++ ++H G GE+ + E+E
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELE 415
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/498 (30%), Positives = 265/498 (53%), Gaps = 9/498 (1%)
Query: 41 KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXX 100
+Q+H ++ G ++ L+ SD+L A ++F P+PD +N+L+
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRF--YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYV 132
Query: 101 XXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDT-H 159
F+++ R VFP+ FSF AL A G +H + + G + +
Sbjct: 133 QSGRFQEGICLFLELHR-SDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGN 191
Query: 160 VFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV 219
V VG LI MYG+CG + A VF M E + V+WNA V +C R G + F +MP
Sbjct: 192 VVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN 251
Query: 220 RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL 279
+ ++N ++ + K+G+ A +V S+MP + SW+T++ G ++ +A FF ++
Sbjct: 252 PDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Query: 280 LREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNV 339
G+R +E SL+ VL+A A +G ++H K G V +ALID YSKCG +
Sbjct: 312 HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGML 371
Query: 340 AMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM-EESGVRPDGITFISLLY 398
A+L+F M ++++ W +I+G A +G EA++LF+++ +E ++PD TF++LL
Sbjct: 372 KHAELMFWTMP-RKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLA 430
Query: 399 ACSHSGL-VEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPN 457
CSH + +E F M N Y I+P++EH ++ G+ + +A + I + +
Sbjct: 431 VCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYD 490
Query: 458 AVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGD--HVLLSNVYAVAGKWKDVVSIR 515
V WR LLGACS +++ A+ V A++ E+ + + ++++SN+YA +W++V IR
Sbjct: 491 GVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIR 550
Query: 516 RTMTEQSMVKTPGWSMIE 533
+ M E ++K G S I+
Sbjct: 551 KIMRESGVLKEVGSSWID 568
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 256/531 (48%), Gaps = 46/531 (8%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALK 133
L A R+F N D +NT+I F M V P F+++ L
Sbjct: 250 LESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML-MSGVDPTQFTYSIVLN 308
Query: 134 GVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVT 193
G + GS G +H + + + L+ MY CGD A VF + PN+V+
Sbjct: 309 GCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVS 368
Query: 194 WNAAVTAC----------------------------FRCGDVAGA---RGVFGRMP---- 218
WN+ ++ C F A A R V G++
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 219 -----VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAF 273
R++ +L+ Y K E A++VF M +D V W+ MIVG + G+ + A
Sbjct: 429 TKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAV 488
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
FF E+ RE R + SL+ V+ AC+ G++ H ++GF + SV AL+D Y
Sbjct: 489 QFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMY 548
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
K G A+ +F +++ + W S++ + HG E+AL F ++ E+G PD +T+
Sbjct: 549 GKNGKYETAETIF-SLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTY 607
Query: 394 ISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP 453
+SLL ACSH G QG ++++MK GI+ +HY CMV+L +A + +A E I Q P
Sbjct: 608 LSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP 666
Query: 454 ISPN-AVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVV 512
N A +WRTLL AC N+++ ++ ++DP ++ H+LLSN+YAV G+W+DV
Sbjct: 667 PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVA 726
Query: 513 SIRRTMTEQSMVKTPGWSMIEI-NKVMYGFVAGEKPN-EVTEEAHDKLREI 561
+RR + + K PG S IE+ N F +G++ N EV +A D+L +
Sbjct: 727 EMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQDELNRL 777
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 219/502 (43%), Gaps = 49/502 (9%)
Query: 21 NTLEPRWVSLLSKCSS---LKPTKQIHTHLYVTGL--HTHPLFFGKLLLHCAVTISDALH 75
N + V L KC S LK +QIH + G T + L+ V +L
Sbjct: 91 NEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCG-SLE 149
Query: 76 YALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGV 135
A ++F P+ + YN L P V P+S +F ++
Sbjct: 150 QARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVC 209
Query: 136 ANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN 195
A + G+ L+ Q + G+ +V V T+++ MY CGD ESARR+FD + + V WN
Sbjct: 210 AVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWN 269
Query: 196 AAVTACFRCGDVAGARGVFGRMPVRNLT----SWNVMLAGYTKAGELGLARRV------- 244
+ + + F M + + +++++L G +K G L + +
Sbjct: 270 TMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVS 329
Query: 245 --FSEMPLKDD--------------------------VSWSTMIVGLAHNGSFDQAFGFF 276
+++PL + VSW+++I G + NG +QA +
Sbjct: 330 DSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMY 389
Query: 277 RELLREGI-RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSK 335
R LLR RP+E + + +SA A+ GK+LHG + K G+ V L+ Y K
Sbjct: 390 RRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFK 449
Query: 336 CGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFIS 395
AQ VF M R +V WT +I G + G+ E A+Q F EM R DG + S
Sbjct: 450 NREAESAQKVFDVMK-ERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSS 508
Query: 396 LLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPIS 455
++ ACS ++ QG E+F + G + + G +VD+YG+ + A E I + +
Sbjct: 509 VIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASN 566
Query: 456 PNAVIWRTLLGACSIHGNIELA 477
P+ W ++LGA S HG +E A
Sbjct: 567 PDLKCWNSMLGAYSQHGMVEKA 588
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 185/420 (44%), Gaps = 52/420 (12%)
Query: 141 LKPGTQLHCQAFRHGFDTHV---FVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAA 197
LK Q+H G + LISMY CG E AR+VFD+MP NVV++NA
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNAL 169
Query: 198 VTACFRCGDVAG-ARGVFGRMPVR------------------------------------ 220
+A R D A A + M
Sbjct: 170 YSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLG 229
Query: 221 ---NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFR 277
N+ +L Y+ G+L ARR+F + +D V+W+TMIVG N + FFR
Sbjct: 230 YSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG 337
+L G+ P + + + VL+ C++ G+ GK++H + S L ++NAL+D Y CG
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 338 NVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHE-MEESGVRPDGITFISL 396
++ A VF + ++VSW SII+G + +G GE+A+ ++ + S RPD TF +
Sbjct: 350 DMREAFYVFGRIH-NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISP 456
+ A + G + ++ L G E ++ ++ +Y + A + M
Sbjct: 409 ISATAEPERFVHGKLLHGQVTKL-GYERSVFVGTTLLSMYFKNREAESAQKVFDVMK-ER 466
Query: 457 NAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRR 516
+ V+W ++ S GN ELA V+ + N D LS +V G D+ +R+
Sbjct: 467 DVVLWTEMIVGHSRLGNSELA--VQFFIEMYREKNRSDGFSLS---SVIGACSDMAMLRQ 521
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 108/276 (39%), Gaps = 41/276 (14%)
Query: 35 SSLKPTKQIH---THLYVTGL-HTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTF 90
++ +P + +H H VT L + +F G LL +A A ++F D
Sbjct: 411 ATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREA-ESAQKVFDVMKERDVV 469
Query: 91 MYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQ 150
++ +I FI+M R D FS + + ++ L+ G HC
Sbjct: 470 LWTEMIVGHSRLGNSELAVQFFIEMYREKNR-SDGFSLSSVIGACSDMAMLRQGEVFHCL 528
Query: 151 AFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGA 210
A R GFD + V L+ MYG+ G E+A +F P+
Sbjct: 529 AIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPD-------------------- 568
Query: 211 RGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMP----LKDDVSWSTMIVGLAHN 266
L WN ML Y++ G + A F ++ + D V++ +++ +H
Sbjct: 569 -----------LKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHR 617
Query: 267 GSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG 302
GS Q + ++ +GI+ + +++ ++AG
Sbjct: 618 GSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAG 653
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 164/538 (30%), Positives = 250/538 (46%), Gaps = 46/538 (8%)
Query: 37 LKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLI 96
L KQ H + G++ + LF LL I + A +LF P + +N LI
Sbjct: 52 LSDVKQEHGFMVKQGIY-NSLFLQNKLLQAYTKIRE-FDDADKLFDEMPLRNIVTWNILI 109
Query: 97 RXXXXXXXXXXXXH--PFIQMRR--HPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAF 152
F + R V D SF ++ + ++K G QLHC
Sbjct: 110 HGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV 169
Query: 153 RHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARG 212
+ G ++ F T+L+ YG+CG ARRVF+ + + ++V WNA V++ G + A G
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 213 VFGRMPVR-------------------------------------NLTSWNVMLAGYTKA 235
+ M ++ +L Y K+
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKS 289
Query: 236 GELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
L AR F M +++ VSW+ MIVG A NG +A F ++L E ++P+E++ VL
Sbjct: 290 NHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVL 349
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI 355
S+CA+ A K + + K G SV N+LI +YS+ GN++ A L F ++ +
Sbjct: 350 SSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDL 408
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
VSWTS+I LA HG EE+LQ+F M + ++PD ITF+ +L ACSH GLV++G F +
Sbjct: 409 VSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKR 467
Query: 416 MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIE 475
M Y IE EHY C++DL GRA + +A + + MP P+ G C+IH E
Sbjct: 468 MTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRE 527
Query: 476 LAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMV-KTPGWSMI 532
+ +L E++P ++ +LSN Y G W +R+ KTPG S +
Sbjct: 528 SMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 164/572 (28%), Positives = 271/572 (47%), Gaps = 45/572 (7%)
Query: 42 QIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXX 101
Q+ + + TGL + L G + + S + A R+F D +N+L+
Sbjct: 195 QLQSTVVKTGLES-DLVVGNSFI-TMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 102 XXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVF 161
+ V D SF + + LK Q+H + G+++ +
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLE 312
Query: 162 VGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA--------------------- 200
VG L+S Y +CG E+ + VF +M E NVV+W +++
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNE 372
Query: 201 --------CFRCGD-VAGARGVFGRMPVRNLTS----WNVMLAGYTKAGELGLARRVFSE 247
+C + + + G S N + Y K L A++ F +
Sbjct: 373 VTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFED 432
Query: 248 MPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG--ASE 305
+ ++ +SW+ MI G A NG +A F E + PNE + VL+A A A + +
Sbjct: 433 ITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVK 491
Query: 306 FGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGL 365
G+ H + K G V++AL+D Y+K GN+ ++ VF MS V WTSII+
Sbjct: 492 QGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFV-WTSIISAY 550
Query: 366 AMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPT 425
+ HG E + LFH+M + V PD +TF+S+L AC+ G+V++G EIF+ M +Y +EP+
Sbjct: 551 SSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPS 610
Query: 426 IEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLA 485
EHY CMVD+ GRA RL +A E + ++P P + +++LG+C +HGN+++ V
Sbjct: 611 HEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAM 670
Query: 486 EMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINK-----VMYG 540
EM P SG +V + N+YA +W IR+ M ++++ K G+S I++ M G
Sbjct: 671 EMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQG 730
Query: 541 FVAGEKPNEVTEEAHDKLREIMLRLRAEAGYA 572
F +G+K + ++E + + I L + E A
Sbjct: 731 FSSGDKSHPKSDEIYRMVEIIGLEMNLEGKVA 762
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 202/441 (45%), Gaps = 55/441 (12%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
AL +F++ +PD +NT++ + ++M+ VF D+F+++ AL
Sbjct: 130 ALCIFENLVDPDVVSWNTIL---SGFDDNQIALNFVVRMKSAGVVF-DAFTYSTALSFCV 185
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN- 195
G QL + G ++ + VG + I+MY G ARRVFDEM ++++WN
Sbjct: 186 GSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNS 245
Query: 196 -----------------------------------AAVTACFRCGDVAGARGVFGRMPVR 220
+ +T C D+ AR + G R
Sbjct: 246 LLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR 305
Query: 221 NLTSW----NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
S N++++ Y+K G L + VF +M ++ VSW+TMI + + D A F
Sbjct: 306 GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIF 360
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
+ +G+ PNEV+ G+++A + G +HG K+GF+ SV N+ I Y+K
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 420
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
+ A+ F +++ R I+SW ++I+G A +G EAL++F + P+ TF S+
Sbjct: 421 EALEDAKKAFEDITF-REIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSV 478
Query: 397 LYACSHSG--LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI 454
L A + + V+QG + + L G+ ++D+Y + + ++ + +M
Sbjct: 479 LNAIAFAEDISVKQGQRCHAHLLKL-GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS- 536
Query: 455 SPNAVIWRTLLGACSIHGNIE 475
N +W +++ A S HG+ E
Sbjct: 537 QKNQFVWTSIISAYSSHGDFE 557
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 19/284 (6%)
Query: 192 VTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSW----NVMLAGYTKAGELGLARRVFSE 247
VT A+ AC GD+ + G TS+ N ++ Y KAG A +F
Sbjct: 79 VTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFEN 136
Query: 248 MPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFG 307
+ D VSW+T++ G N A F + G+ + + + LS C + G
Sbjct: 137 LVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLG 193
Query: 308 KILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAM 367
L + K+G V N+ I YS+ G+ A+ VF MS + ++SW S+++GL+
Sbjct: 194 LQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF-KDMISWNSLLSGLSQ 252
Query: 368 HG-HGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNL---YGIE 423
G G EA+ +F +M GV D ++F S++ C H E ++ ++ L G E
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH----ETDLKLARQIHGLCIKRGYE 308
Query: 424 PTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA 467
+E ++ Y + L QM N V W T++ +
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTMISS 351
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 12/234 (5%)
Query: 271 QAFGFFRELLREGI---RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN 327
+A F+E L+ G +EV+L L AC G + G +HGF SGF V+N
Sbjct: 58 RALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSN 115
Query: 328 ALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVR 387
A++ Y K G A +F N+ V +VSW +I++G + AL M+ +GV
Sbjct: 116 AVMGMYRKAGRFDNALCIFENL-VDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVV 171
Query: 388 PDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYE 447
D T+ + L C S G ++ S + G+E + + +Y R+ A
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKT-GLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 448 FICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNV 501
+M + + W +LL S G +V R M DHV ++V
Sbjct: 231 VFDEMSF-KDMISWNSLLSGLSQEGTFGFEAVVIFR-DMMREGVELDHVSFTSV 282
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 121/299 (40%), Gaps = 22/299 (7%)
Query: 25 PRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLL-HCAVTIS---DALHYALRL 80
P V+ + +++K +QI L + GL F + + + +T+ +AL A +
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 81 FQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA--NG 138
F+ + +N +I F+ P+ ++F L +A
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA--AETMPNEYTFGSVLNAIAFAED 487
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
S+K G + H + G ++ V + L+ MY + G+ + + +VF+EM + N W + +
Sbjct: 488 ISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSII 547
Query: 199 TACFRCGDVAGARGVFGRMPVRN----LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV 254
+A GD +F +M N L ++ +L + G + +F+ M ++
Sbjct: 548 SAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNL 607
Query: 255 S-----WSTMIVGLAHNGSFDQAFGFFRELLREGI-RPNEVSLTGVLSACAQAGASEFG 307
+S M+ L G +A EL+ E P E L +L +C G + G
Sbjct: 608 EPSHEHYSCMVDMLGRAGRLKEA----EELMSEVPGGPGESMLQSMLGSCRLHGNVKMG 662
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/498 (31%), Positives = 242/498 (48%), Gaps = 38/498 (7%)
Query: 38 KPTKQIHTHLYVTGLHTHPLFFGKLL---LHCAVTISDALHYALRLFQHFPNPDTFMYNT 94
K K+IH + TG KLL L C L YA ++F P P YN
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCG-----CLSYARQVFDELPKPTLSAYNY 105
Query: 95 LIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRH 154
+I +Q + D ++ + LK + GS + C+
Sbjct: 106 MISGYLKHGLVKELL-LLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCR---- 160
Query: 155 GFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVF 214
V +I E D V A V + G + AR VF
Sbjct: 161 ------LVHARIIKCDVELDD----------------VLITALVDTYVKSGKLESARTVF 198
Query: 215 GRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNG-SFDQAF 273
M N+ M++GY G + A +F+ +KD V ++ M+ G + +G + ++
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSV 258
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
+ + R G PN + V+ AC+ + E G+ +H + KSG + ++L+D Y
Sbjct: 259 DMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
+KCG + A+ VF M +++ SWTS+I G +G+ EEAL+LF M+E + P+ +TF
Sbjct: 319 AKCGGINDARRVFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTF 377
Query: 394 ISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP 453
+ L ACSHSGLV++G EIF M+ Y ++P +EHY C+VDL GRA L+KA+EF MP
Sbjct: 378 LGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMP 437
Query: 454 ISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNS-GDHVLLSNVYAVAGKWKDVV 512
P++ IW LL +C++HGN+ELA + + L +++ + G ++ LSNVYA KW +V
Sbjct: 438 ERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVS 497
Query: 513 SIRRTMTEQSMVKTPGWS 530
IR M + + KT G S
Sbjct: 498 KIREVMKRRRISKTIGRS 515
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 31/269 (11%)
Query: 112 FIQMRR---HPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLIS 168
+I M+R HP + +FA + + S + G Q+H Q + G TH+ +G++L+
Sbjct: 261 YISMQRAGFHPNIS----TFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
Query: 169 MYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP-VRNLTSWNV 227
MY +CG ARRVFD+M E NV +W + + + G+ A +F RM R ++
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 228 MLAGYTKAGELGLARR---VFSEM----PLKDDVSWSTMIVGL-AHNGSFDQAFGFFREL 279
L + GL + +F M +K + IV L G ++AF F R +
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAM 436
Query: 280 LREGIRPNEVSLTGVLSACAQAGASEFGKI-------LHGFMEKSGFLYISSVNNALIDT 332
RP+ +LS+C G E I L+ +L +S+V +
Sbjct: 437 PE---RPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNV----YAS 489
Query: 333 YSKCGNVAMAQLVFRNMSVGRSI-VSWTS 360
K NV+ + V + + ++I SWTS
Sbjct: 490 NDKWDNVSKIREVMKRRRISKTIGRSWTS 518
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 221/412 (53%), Gaps = 47/412 (11%)
Query: 164 TTLISMYGEC---GDSESARRVFDEMPEPNVVTWNAAVT--------------------- 199
T IS+ G C GD E+ RR+F +P+P+V WNA ++
Sbjct: 351 VTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 410
Query: 200 --------------ACFRCGDVAGARGVFGRMPVRNLTSWNV-----MLAGYTKAGELGL 240
+C R + G + + G + +R S N ++A Y++ ++ +
Sbjct: 411 NLKPDKTTLSVILSSCARLRFLEGGKQIHG-VVIRTEISKNSHIVSGLIAVYSECEKMEI 469
Query: 241 ARRVFSEMPLKDDVS-WSTMIVGLAHNGSFDQAFGFFRELLREGIR-PNEVSLTGVLSAC 298
+ +F + + D++ W++MI G HN +A FR + + + PNE S VLS+C
Sbjct: 470 SECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 529
Query: 299 AQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSW 358
++ + G+ HG + KSG++ S V AL D Y KCG + A+ F + + ++ V W
Sbjct: 530 SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF-DAVLRKNTVIW 588
Query: 359 TSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
+I G +G G+EA+ L+ +M SG +PDGITF+S+L ACSHSGLVE G EI S M+
Sbjct: 589 NEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQR 648
Query: 419 LYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAE 478
++GIEP ++HY C+VD GRA RL A + P ++V+W LL +C +HG++ LA
Sbjct: 649 IHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLAR 708
Query: 479 LVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWS 530
V +L +DP +S +VLLSN Y+ +W D +++ M + + KTPG S
Sbjct: 709 RVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 187/428 (43%), Gaps = 86/428 (20%)
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACF 202
G +H R G + ++ L+ +Y ECGD + AR+
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARK--------------------- 62
Query: 203 RCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
VF M VR++ SWN L K G+LG A VF MP +D VSW+ MI
Sbjct: 63 ----------VFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISV 112
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
L G ++A ++ ++ +G P+ +L VLSAC++ FG HG K+G
Sbjct: 113 LVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKN 172
Query: 323 SSVNNALIDTYSKCG-NVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
V NAL+ Y+KCG V VF ++S VS+T++I GLA EA+Q+F M
Sbjct: 173 IFVGNALLSMYAKCGFIVDYGVRVFESLSQPNE-VSYTAVIGGLARENKVLEAVQMFRLM 231
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGC------------------------------- 410
E GV+ D + ++L + +GC
Sbjct: 232 CEKGVQVDSVCLSNILSISAP----REGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLN 287
Query: 411 ----EIFSKMKNLYGIE------PTIE--HYGCMVDLYGRAARLHKAYEFICQMPIS--- 455
EI++K K++ G E P + + M+ +G+ R K+ EF+ +M S
Sbjct: 288 NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 347
Query: 456 PNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIR 515
PN V ++LGAC G++E + + + + P+ S + +LS Y+ +++ +S
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRIFSSIPQ--PSVSAWNAMLSG-YSNYEHYEEAISNF 404
Query: 516 RTMTEQSM 523
R M Q++
Sbjct: 405 RQMQFQNL 412
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 204/461 (44%), Gaps = 26/461 (5%)
Query: 29 SLLSKCSSLKPT---KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFP 85
S+LS CS + + H TGL + +F G LL + Y +R+F+
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKN-IFVGNALLSMYAKCGFIVDYGVRVFESLS 201
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFIQM-----RRHPTVFPDSFSFAFALKGVANGGS 140
P+ Y +I F M + + S + +G +
Sbjct: 202 QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSE 261
Query: 141 L---KPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAA 197
+ + G Q+HC A R GF + + +L+ +Y + D A +F EMPE NVV+WN
Sbjct: 262 IYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 198 VTACFRCGDVAGARGVFGRMPVRNLTSWNV----MLAGYTKAGELGLARRVFSEMPLKDD 253
+ + + RM V +L ++G++ RR+FS +P
Sbjct: 322 IVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSV 381
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
+W+ M+ G ++ +++A FR++ + ++P++ +L+ +LS+CA+ E GK +HG
Sbjct: 382 SAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGV 441
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEE 373
+ ++ S + + LI YS+C + +++ +F + I W S+I+G + +
Sbjct: 442 VIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTK 501
Query: 374 ALQLFHEMEESGVR-PDGITFISLLYACSHSGLVEQGCEIFS-KMKNLYGIEPTIEHYGC 431
AL LF M ++ V P+ +F ++L +CS + G + +K+ Y + +E
Sbjct: 502 ALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVET--A 559
Query: 432 MVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
+ D+Y + + A +F + N VIW + IHG
Sbjct: 560 LTDMYCKCGEIDSARQFF-DAVLRKNTVIWNEM-----IHG 594
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 118/309 (38%), Gaps = 52/309 (16%)
Query: 16 EEAMSN-------TLEPRWVSL---LSKCSSLK---PTKQIHTHLYVTGLHTHPLFFGKL 62
EEA+SN L+P +L LS C+ L+ KQIH + T + + L
Sbjct: 398 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 457
Query: 63 LLHCAVTISDALHYALRLFQHFPNP-DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTV 121
+ + + + + +F N D +N++I F +M + +
Sbjct: 458 I--AVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVL 515
Query: 122 FPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARR 181
P+ SFA L + SL G Q H + G+ + FV T L MY +CG+ +SAR+
Sbjct: 516 CPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQ 575
Query: 182 VFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGE---- 237
FD + N V WN M+ GY G
Sbjct: 576 FFDAVLRKNTVIWNE-------------------------------MIHGYGHNGRGDEA 604
Query: 238 LGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR-EGIRPNEVSLTGVLS 296
+GL R++ S D +++ +++ +H+G + + R GI P ++
Sbjct: 605 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 664
Query: 297 ACAQAGASE 305
+AG E
Sbjct: 665 CLGRAGRLE 673
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 221/422 (52%), Gaps = 36/422 (8%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYG 171
F+QM + D+ F+ ALK A G +H + + F ++ FVG L+ MYG
Sbjct: 35 FLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYG 94
Query: 172 ECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG 231
+C V+ AR +F +P RN WN M++
Sbjct: 95 -------------------------------KCLSVSHARKLFDEIPQRNAVVWNAMISH 123
Query: 232 YTKAGELGLARRVFSEMP-LKDDVSWSTMIVGL--AHNGSFDQAFGFFRELLREGIRPNE 288
YT G++ A ++ M + ++ S++ +I GL +GS+ +A F+R+++ +PN
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSY-RAIEFYRKMIEFRFKPNL 182
Query: 289 VSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRN 348
++L ++SAC+ GA K +H + ++ + + L++ Y +CG++ QLVF +
Sbjct: 183 ITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDS 242
Query: 349 MSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQ 408
M R +V+W+S+I+ A+HG E AL+ F EME + V PD I F+++L ACSH+GL ++
Sbjct: 243 ME-DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADE 301
Query: 409 GCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGAC 468
F +M+ YG+ + +HY C+VD+ R R +AY+ I MP P A W LLGAC
Sbjct: 302 ALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGAC 361
Query: 469 SIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPG 528
+G IELAE+ L ++P N ++VLL +Y G+ ++ +R M E + +PG
Sbjct: 362 RNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPG 421
Query: 529 WS 530
S
Sbjct: 422 SS 423
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 205/358 (57%), Gaps = 9/358 (2%)
Query: 195 NAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV 254
NA + + G V A +F ++ + + SWN ++ + AG+L A +FSE+ + V
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHV 392
Query: 255 --------SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEF 306
+W+++I G G D + +FR++ + N V++ +LS CA+ A
Sbjct: 393 CNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNL 452
Query: 307 GKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLA 366
G+ +HG + ++ V NAL++ Y+KCG ++ LVF + + ++SW SII G
Sbjct: 453 GREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIR-DKDLISWNSIIKGYG 511
Query: 367 MHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTI 426
MHG E+AL +F M SG PDGI +++L ACSH+GLVE+G EIF M +G+EP
Sbjct: 512 MHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQ 571
Query: 427 EHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAE 486
EHY C+VDL GR L +A E + MP+ P + LL +C +H N+++AE + ++L+
Sbjct: 572 EHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSV 631
Query: 487 MDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAG 544
++P +G ++LLSN+Y+ G+W++ ++R ++ + K G S IE+ K Y F +G
Sbjct: 632 LEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSG 689
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 9/238 (3%)
Query: 188 EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSE 247
+ N+ N +T + G + A +F MPVRN SWNVM+ G+++ + A ++F
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 248 MPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGA 303
M + D+V+W++++ + G F+ +F + G + +L S CA+ A
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 304 SEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIA 363
+ +HG++ K GF NALI Y K G V A+ +FR + + I SW S+I
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR-NKGIESWNSLIT 368
Query: 364 GLAMHGHGEEALQLFHEMEE----SGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
G +EAL LF E+EE V+ + +T+ S++ C+ G + E F +M+
Sbjct: 369 SFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 4/193 (2%)
Query: 228 MLAGYTKAGELGLARRVF---SEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
+++ Y + G L AR VF S + L D W++++ +G ++ A +R + + G+
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
+ L +L AC G + H + + G V N L+ Y K G + A
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
+F M V R+ +SW +I G + E A+++F M+ +PD +T+ S+L S G
Sbjct: 215 LFVEMPV-RNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 405 LVEQGCEIFSKMK 417
E + F M+
Sbjct: 274 KFEDVLKYFHLMR 286
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 309 ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVG--RSIVSWTSIIAGLA 366
+L F+ +SG S+ LI Y++ G + A+ VF +S+ + W SI+
Sbjct: 80 LLSDFIFRSG-----SLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANV 134
Query: 367 MHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTI 426
HG E AL+L+ M + G+ DG +L AC + G C F G++ +
Sbjct: 135 SHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGL-CRAFHTQVIQIGLKENL 193
Query: 427 EHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLA- 485
++ LY +A R+ AY +MP+ N + W ++ S + E A + +
Sbjct: 194 HVVNELLTLYPKAGRMGDAYNLFVEMPVR-NRMSWNVMIKGFSQEYDCESAVKIFEWMQR 252
Query: 486 -EMDPNNSGDHVLLSNVYAVAGKWKDVV 512
E P+ +LS ++ GK++DV+
Sbjct: 253 EEFKPDEVTWTSVLS-CHSQCGKFEDVL 279
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 226/449 (50%), Gaps = 37/449 (8%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALK 133
+ A LF D + T+I + +M R + P L
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLR-CGMKPSEVMMVDLLS 313
Query: 134 GVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVT 193
A G QLH + GFD + F+ T+I Y D + A + F+ + ++ +
Sbjct: 314 ASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIAS 373
Query: 194 WNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDD 253
NA ++AG+ K G + AR VF + KD
Sbjct: 374 RNA-------------------------------LIAGFVKNGMVEQAREVFDQTHDKDI 402
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREG-IRPNEVSLTGVLSACAQAGASEFGKILHG 312
SW+ MI G A + S A FRE++ ++P+ +++ V SA + G+ E GK H
Sbjct: 403 FSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHD 462
Query: 313 FMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF---RNMSVGRSIVSWTSIIAGLAMHG 369
++ S ++ A+ID Y+KCG++ A +F +N+S +I W +II G A HG
Sbjct: 463 YLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNIS-SSTISPWNAIICGSATHG 521
Query: 370 HGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHY 429
H + AL L+ +++ ++P+ ITF+ +L AC H+GLVE G F MK+ +GIEP I+HY
Sbjct: 522 HAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHY 581
Query: 430 GCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDP 489
GCMVDL G+A RL +A E I +MP+ + +IW LL A HGN+E+AEL LA +DP
Sbjct: 582 GCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDP 641
Query: 490 NNSGDHVLLSNVYAVAGKWKDVVSIRRTM 518
++ G V+LSNVYA AG+W+DV +R M
Sbjct: 642 SHGGCKVMLSNVYADAGRWEDVALVREEM 670
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 188/435 (43%), Gaps = 68/435 (15%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
AL+LF P Y TLI+ F +MR + + + + A + +
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR-NLGIMLNEVTLATVISACS 184
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
+ G + L A + + VFV T L+ MY C + AR++FDEM
Sbjct: 185 HLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEM---------- 234
Query: 197 AVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSW 256
P RNL +WNVML GY+KAG + A +F ++ KD VSW
Sbjct: 235 ---------------------PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273
Query: 257 STMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEK 316
TMI G D+A ++ E+LR G++P+EV + +LSA A++ S G LHG + K
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333
Query: 317 SGF------------LYISSVN-------------------NALIDTYSKCGNVAMAQLV 345
GF Y S + NALI + K G V A+ V
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM-EESGVRPDGITFISLLYACSHSG 404
F + + + I SW ++I+G A + AL LF EM S V+PD IT +S+ A S G
Sbjct: 394 F-DQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLG 452
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI--WR 462
+E+G + N I P ++D+Y + + A Q ++ I W
Sbjct: 453 SLEEGKRAHDYL-NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWN 511
Query: 463 TLLGACSIHGNIELA 477
++ + HG+ +LA
Sbjct: 512 AIICGSATHGHAKLA 526
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/327 (39%), Positives = 197/327 (60%), Gaps = 13/327 (3%)
Query: 232 YTKAGELGLARRVFSEMPLKDD-VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
Y+ G++ AR+VF E P K + V W+ MI N + +A F+ + E I + V
Sbjct: 110 YSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVI 169
Query: 291 LTGVLSACAQAGASEFGKILHG--FMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRN 348
+T LSACA GA + G+ ++ K ++ N+L++ Y K G A+ +F +
Sbjct: 170 VTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLF-D 228
Query: 349 MSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM------EESGVRPDGITFISLLYACSH 402
S+ + + ++TS+I G A++G +E+L+LF +M +++ + P+ +TFI +L ACSH
Sbjct: 229 ESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSH 288
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWR 462
SGLVE+G F M Y ++P H+GCMVDL+ R+ L A+EFI QMPI PN VIWR
Sbjct: 289 SGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWR 348
Query: 463 TLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQS 522
TLLGACS+HGN+EL E V+ R+ E+D ++ GD+V LSN+YA G W + +R + ++
Sbjct: 349 TLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRR 408
Query: 523 MVKTPGWSMIEINKVMYGFVAGEKPNE 549
M PG S IE+ ++ FV+G N+
Sbjct: 409 M---PGKSWIELGSIINEFVSGPDNND 432
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 144/326 (44%), Gaps = 54/326 (16%)
Query: 114 QMRRHPTVFPDSFSFAFALK-GVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGE 172
+ R+ P+ F DSFS FA+K A S G Q+H + GF+ + + T+L+ Y
Sbjct: 54 RFRQSPS-FVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSS 112
Query: 173 CGDSESARRVFDEMPEP-NVVTWNA----------------------------------- 196
GD + AR+VFDE PE N+V W A
Sbjct: 113 VGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTV 172
Query: 197 AVTACFRCGDVAGARGVFGRMPVR------NLTSWNVMLAGYTKAGELGLARRVFSEMPL 250
A++AC G V ++ R R +LT N +L Y K+GE AR++F E
Sbjct: 173 ALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMR 232
Query: 251 KDDVSWSTMIVGLAHNGSFDQAFGFFREL------LREGIRPNEVSLTGVLSACAQAGAS 304
KD ++++MI G A NG ++ F+++ I PN+V+ GVL AC+ +G
Sbjct: 233 KDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLV 292
Query: 305 EFGKILHGFMEKSGFLYISSVN-NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIA 363
E GK M L + ++D + + G++ A M + + V W +++
Sbjct: 293 EEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLG 352
Query: 364 GLAMHGH---GEEALQLFHEMEESGV 386
++HG+ GEE + E++ V
Sbjct: 353 ACSLHGNVELGEEVQRRIFELDRDHV 378
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 113/238 (47%), Gaps = 14/238 (5%)
Query: 276 FRELLREGIRPNEVSLTGVLSA----CAQAGASEFGKILHGFMEKSGFLYISSVNNALID 331
FR R+ P+ V VL A AQ +S G+ +H + K GF + + +L+
Sbjct: 51 FRHRFRQS--PSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVG 108
Query: 332 TYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGI 391
YS G+V A+ VF ++IV WT++I+ + + EA++LF ME + DG+
Sbjct: 109 FYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGV 168
Query: 392 TFISLLYACSHSGLVEQGCEIFS---KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEF 448
L AC+ G V+ G EI+S K K ++ T+ + ++++Y ++ KA +
Sbjct: 169 IVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRN--SLLNMYVKSGETEKARKL 226
Query: 449 ICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAG 506
+ + + + +++ +++G + + + ++ +D S D V+ N G
Sbjct: 227 FDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTID--QSQDTVITPNDVTFIG 281
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 232/495 (46%), Gaps = 48/495 (9%)
Query: 65 HCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPD 124
+C + D A+ LF P P+ +N LI ++M+R V D
Sbjct: 183 YCKAGLMDE---AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEF-LVRMQREGLVL-D 237
Query: 125 SFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFD 184
F+ LK + GG L G QLHC + G ++ F + LI MY CG A VF
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 185 EMP---EPNVVTWNAAVTA----------------------CFRCGDVAGARGV---FGR 216
+ +V WN+ ++ CF ++GA + +
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 217 MPVRNLTSWNVMLAGY--------------TKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
+ + V+++GY G + A ++F +P KD +++S +I G
Sbjct: 358 LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRG 417
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
+G AF FREL++ G+ ++ ++ +L C+ + +GK +HG K G+
Sbjct: 418 CVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE 477
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
AL+D Y KCG + ++F M + R +VSWT II G +G EEA + FH+M
Sbjct: 478 PVTATALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMI 536
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
G+ P+ +TF+ LL AC HSGL+E+ MK+ YG+EP +EHY C+VDL G+A
Sbjct: 537 NIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLF 596
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVY 502
+A E I +MP+ P+ IW +LL AC H N L ++ +L + P++ + LSN Y
Sbjct: 597 QEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAY 656
Query: 503 AVAGKWKDVVSIRRT 517
A G W + +R
Sbjct: 657 ATLGMWDQLSKVREA 671
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 179/443 (40%), Gaps = 88/443 (19%)
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTW----- 194
+ K G + + G +VF+ +ISMY + A +VFDEM E N+VTW
Sbjct: 20 AFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVS 79
Query: 195 -------------------------------NAAVTACFRCGDVAGARGVFGRMPVRNL- 222
+A + AC GD+ V+ R+ NL
Sbjct: 80 GYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLR 139
Query: 223 ----------------------------------TSWNVMLAGYTKAGELGLARRVFSEM 248
TSWN +++GY KAG + A +F M
Sbjct: 140 GDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM 199
Query: 249 PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK 308
P + VSW+ +I G GS +A F + REG+ + +L L AC+ G GK
Sbjct: 200 PQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGK 258
Query: 309 ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF--RNMSVGRSIVSWTSIIAGLA 366
LH + KSG +ALID YS CG++ A VF ++V S+ W S+++G
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 367 MHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTI 426
++ E AL L ++ +S + D T L C + + G ++ S + + G E
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS-LVVVSGYELDY 377
Query: 427 EHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA-----ELVK 481
+VDL+ + A++ ++P + + + + L+ C G LA EL+K
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 482 ARLAEMDPNNSGDHVLLSNVYAV 504
L D ++SN+ V
Sbjct: 437 LGL-------DADQFIVSNILKV 452
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 169/425 (39%), Gaps = 53/425 (12%)
Query: 41 KQIHTHLYVTGLHTHPLFFGKLL---LHCAVTISDALHYALRLFQHFP---NPDTFMYNT 94
KQ+H + +GL + P L+ +C +L YA +F N ++N+
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCG-----SLIYAADVFHQEKLAVNSSVAVWNS 312
Query: 95 LIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRH 154
++ +Q+ + F DS++ + ALK N +L+ G Q+H
Sbjct: 313 MLSGFLINEENEAALWLLLQIYQSDLCF-DSYTLSGALKICINYVNLRLGLQVHSLVVVS 371
Query: 155 GFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVF 214
G++ VG+ L+ ++ G+ + A ++F +P +++ ++ + C + G + A +F
Sbjct: 372 GYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLF 431
Query: 215 GRMPVRNLTS-------------------WNVMLAG--------------------YTKA 235
+ L + W + G Y K
Sbjct: 432 RELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKC 491
Query: 236 GELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
GE+ +F M +D VSW+ +IVG NG ++AF +F +++ GI PN+V+ G+L
Sbjct: 492 GEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLL 551
Query: 296 SACAQAGASEFGK-ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRS 354
SAC +G E + L + G ++D + G A + M +
Sbjct: 552 SACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPD 611
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
WTS++ H + + + E G D + SL A + G+ +Q ++
Sbjct: 612 KTIWTSLLTACGTHKNA-GLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE 670
Query: 415 KMKNL 419
K L
Sbjct: 671 AAKKL 675
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 131/313 (41%), Gaps = 20/313 (6%)
Query: 36 SLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTL 95
+L+ Q+H+ + V+G + G +L+ + + + A +LF PN D ++ L
Sbjct: 357 NLRLGLQVHSLVVVSG-YELDYIVGSILVDLHANVGN-IQDAHKLFHRLPNKDIIAFSGL 414
Query: 96 IRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHG 155
IR + F ++ + + D F + LK ++ SL G Q+H + G
Sbjct: 415 IRGCVKSGFNSLAFYLFRELIK-LGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKG 473
Query: 156 FDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFG 215
+++ T L+ MY +CG+ ++ +FD M E +VV+W + + G V A F
Sbjct: 474 YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFH 533
Query: 216 RMPVRNLTSWNVMLAGYTKA----GELGLARRVFSEMPLKDDVS-----WSTMIVGLAHN 266
+M + V G A G L AR M + + + ++ L
Sbjct: 534 KMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQA 593
Query: 267 GSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEK--SGFLYISS 324
G F +A ++ E P++ T +L+AC G + ++ EK GF S
Sbjct: 594 GLFQEANELINKMPLE---PDKTIWTSLLTAC---GTHKNAGLVTVIAEKLLKGFPDDPS 647
Query: 325 VNNALIDTYSKCG 337
V +L + Y+ G
Sbjct: 648 VYTSLSNAYATLG 660
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 190/334 (56%), Gaps = 1/334 (0%)
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
+L Y +G+L A +F + ++D + W+ MI G G + + ++ + I P+
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR 347
+ + V AC+ E GK H M K V++AL+D Y KC + + VF
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 348 NMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVE 407
+S R++++WTS+I+G HG E L+ F +M+E G RP+ +TF+ +L AC+H GLV+
Sbjct: 269 QLST-RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVD 327
Query: 408 QGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA 467
+G E F MK YGIEP +HY MVD GRA RL +AYEF+ + P + +W +LLGA
Sbjct: 328 KGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGA 387
Query: 468 CSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTP 527
C IHGN++L EL + E+DP N G++V+ +N YA G + +RR M + K P
Sbjct: 388 CRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDP 447
Query: 528 GWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREI 561
G+S IE+ ++ F+ + + ++E+ + K+ E+
Sbjct: 448 GYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEM 481
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLY 321
GL G +A G L G++ + +L C Q GK +H M GF
Sbjct: 85 GLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFAL 141
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
+ L+ Y+ G++ A ++FR++ + R ++ W ++I+G G +E L ++++M
Sbjct: 142 NEYLKVKLLILYALSGDLQTAGILFRSLKI-RDLIPWNAMISGYVQKGLEQEGLFIYYDM 200
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR 441
++ + PD TF S+ ACS +E G + M I+ I +VD+Y + +
Sbjct: 201 RQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIK-RCIKSNIIVDSALVDMYFKCSS 259
Query: 442 LHKAYEFICQMPISPNAVIWRTLLGACSIHGNI 474
+ Q+ + N + W +L+ HG +
Sbjct: 260 FSDGHRVFDQLS-TRNVITWTSLISGYGYHGKV 291
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 151/381 (39%), Gaps = 54/381 (14%)
Query: 23 LEPR-WVSLLSKCSSLK---PTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYAL 78
+EP + LL +C K K+IH ++V G + KLL+ A +S L A
Sbjct: 106 VEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYA--LSGDLQTAG 163
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
LF+ D +N +I + MR++ V PD ++FA + +
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV-PDQYTFASVFRACSAL 222
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
L+ G + H + +++ V + L+ MY +C RVFD++ NV+TW +
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS-- 280
Query: 199 TACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDV 254
+++GY G++ + F +M + + V
Sbjct: 281 -----------------------------LISGYGYHGKVSEVLKCFEKMKEEGCRPNPV 311
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLRE-GIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
++ ++ H G D+ + F + R+ GI P ++ +AG + + F
Sbjct: 312 TFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA---YEF 368
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM-----SVGRSIVSWTSIIAGLAMH 368
+ KS V +L+ GNV + +L + G + V + + G A
Sbjct: 369 VMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFAN---GYASC 425
Query: 369 GHGEEALQLFHEMEESGVRPD 389
G E A ++ +ME +GV+ D
Sbjct: 426 GLREAASKVRRKMENAGVKKD 446
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/508 (31%), Positives = 248/508 (48%), Gaps = 38/508 (7%)
Query: 29 SLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPD 88
S+L C ++ Q+H +G ++ G L+ + + A R+F+ P+
Sbjct: 137 SVLGGCGDIEGGMQLHCLAMKSGFEME-VYVGTSLVSMYSRCGEWV-LAARMFEKVPHKS 194
Query: 89 TFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLH 148
YN I F MR+ + P+ +F A+ A+ +L+ G QLH
Sbjct: 195 VVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLH 254
Query: 149 CQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVA 208
+ F VGT LI MY +C +SA VF E+ +
Sbjct: 255 GLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKD-------------------- 294
Query: 209 GARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMP---LK-DDVSWSTMIVGLA 264
RNL SWN +++G G+ A +F ++ LK D +W+++I G +
Sbjct: 295 ----------TRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFS 344
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
G +AF FF +L + P+ LT +LSAC+ + GK +HG + K+
Sbjct: 345 QLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIF 404
Query: 325 VNNALIDTYSKCGNVAMAQLVF-RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE 383
V +LID Y KCG + A+ +F R + V W +I+G HG E A+++F + E
Sbjct: 405 VLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLRE 464
Query: 384 SGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLH 443
V P TF ++L ACSH G VE+G +IF M+ YG +P+ EH GCM+DL GR+ RL
Sbjct: 465 EKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLR 524
Query: 444 KAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYA 503
+A E I QM ++V +LLG+C H + L E +LAE++P N V+LS++YA
Sbjct: 525 EAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYA 583
Query: 504 VAGKWKDVVSIRRTMTEQSMVKTPGWSM 531
+W+DV SIR+ + ++ +VK PG S+
Sbjct: 584 ALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 160/333 (48%), Gaps = 41/333 (12%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P+ F+F LK A G + G LH Q + GF VF T L+SMY + A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFG--RMPVRNLTSWNV------------- 227
DEMPE + + NAAV+ G A +FG R+ + S V
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 228 ---------------------MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHN 266
+++ Y++ GE LA R+F ++P K V+++ I GL N
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 267 GSFD---QAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS 323
G + F R+ E PN+V+ ++ACA ++G+ LHG + K F + +
Sbjct: 209 GVMNLVPSVFNLMRKFSSE--EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFET 266
Query: 324 SVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE 383
V ALID YSKC A +VF + R+++SW S+I+G+ ++G E A++LF +++
Sbjct: 267 MVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 384 SGVRPDGITFISLLYACSHSGLVEQGCEIFSKM 416
G++PD T+ SL+ S G V + + F +M
Sbjct: 327 EGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 150/319 (47%), Gaps = 14/319 (4%)
Query: 189 PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRV 244
PN T+ + +C + GDV R + ++ ++ + +++ Y K ++ A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 245 FSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGAS 304
EMP + S + + GL NG AF F + G N V++ VL C G
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 305 EFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAG 364
E G LH KSGF V +L+ YS+CG +A +F + +S+V++ + I+G
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNAFISG 204
Query: 365 LAMHGHGEEALQLFHEMEE-SGVRPDGITFISLLYACSHSGLVEQGCEIFS-KMKNLYGI 422
L +G +F+ M + S P+ +TF++ + AC+ ++ G ++ MK +
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 423 EPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA-ELVK 481
E + ++D+Y + AY ++ + N + W +++ I+G E A EL +
Sbjct: 265 ETMVGT--ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 482 ARLAE-MDPNNSGDHVLLS 499
+E + P+++ + L+S
Sbjct: 323 KLDSEGLKPDSATWNSLIS 341
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 210/376 (55%), Gaps = 16/376 (4%)
Query: 157 DTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACFRCGDVAGARG 212
D+ F +LIS Y E G E A ++ +M E P+ T+ + AC G V
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 213 VFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGS 268
+ + ++ N ++ Y K G++ AR VF +P KD VSW++M+ G H+G
Sbjct: 217 IHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGL 276
Query: 269 FDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNA 328
+A FR +++ GI P++V+++ VL A+ + + G+ LHG++ + G + SV NA
Sbjct: 277 LHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANA 333
Query: 329 LIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRP 388
LI YSK G + A +F M + R VSW +II+ H L+ F +M + +P
Sbjct: 334 LIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKP 389
Query: 389 DGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEF 448
DGITF+S+L C+++G+VE G +FS M YGI+P +EHY CMV+LYGRA + +AY
Sbjct: 390 DGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSM 449
Query: 449 ICQ-MPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGK 507
I Q M + +W LL AC +HGN ++ E+ RL E++P+N + LL +Y+ A +
Sbjct: 450 IVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKR 509
Query: 508 WKDVVSIRRTMTEQSM 523
+DV +R+ M ++ +
Sbjct: 510 AEDVERVRQMMVDRGL 525
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 176/422 (41%), Gaps = 54/422 (12%)
Query: 8 IPTPSSGTEEAMSNTLEPRWVSLLSKCSSLKPTK---QIHTHLYVTGLHTHPLFFGKLLL 64
I + ++ +S T + SLL C SL+ ++H HL L + L L+
Sbjct: 76 ITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGISSKLV 134
Query: 65 HCAVTISDALHYALRLFQHFPNPDT--FMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVF 122
+ A A +F D+ F +N+LI + QM V
Sbjct: 135 RLYASCGYA-EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE-DGVK 192
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD F+F LK GS++ G +H + GF V+V L+ MY +CGD AR V
Sbjct: 193 PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNV 252
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRN--------------------- 221
FD +P + V+WN+ +T G + A +F R+ V+N
Sbjct: 253 FDMIPHKDYVSWNSMLTGYLHHGLLHEALDIF-RLMVQNGIEPDKVAISSVLARVLSFKH 311
Query: 222 ---LTSW-------------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH 265
L W N ++ Y+K G+LG A +F +M +D VSW+ +I +
Sbjct: 312 GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSK 371
Query: 266 NGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSV 325
N + +F ++ R +P+ ++ VLS CA G E G+ L M K +
Sbjct: 372 NSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKME 428
Query: 326 NNA-LIDTYSKCGNVAMA-QLVFRNMSVGRSIVSWTSIIAGLAMHGH---GEEALQLFHE 380
+ A +++ Y + G + A ++ + M + W +++ +HG+ GE A Q E
Sbjct: 429 HYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE 488
Query: 381 ME 382
+E
Sbjct: 489 LE 490
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/457 (29%), Positives = 225/457 (49%), Gaps = 41/457 (8%)
Query: 117 RHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDS 176
R V + +++ + +L G H + G + + T+L+ MY +CGD
Sbjct: 234 RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 293
Query: 177 ESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP------------------ 218
+ARRVF+E ++V W A + G V A +F +M
Sbjct: 294 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Query: 219 --VRNLT-------------SWNVMLAG-----YTKAGELGLARRVFSEMPLKDDVSWST 258
+ NL W+ +A Y K + A+ VF KD V+W++
Sbjct: 354 GLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 413
Query: 259 MIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG 318
+I G + NGS +A F + E + PN V++ + SACA G+ G LH + K G
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473
Query: 319 FLYISSVN--NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQ 376
FL SSV+ AL+D Y+KCG+ A+L+F + ++ ++W+++I G G +L+
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGGYGKQGDTIGSLE 532
Query: 377 LFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLY 436
LF EM + +P+ TF S+L AC H+G+V +G + FS M Y P+ +HY CMVD+
Sbjct: 533 LFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDML 592
Query: 437 GRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHV 496
RA L +A + I +MPI P+ + L C +H +L E+V ++ ++ P+++ +V
Sbjct: 593 ARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYV 652
Query: 497 LLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIE 533
L+SN+YA G+W +R M ++ + K G S +E
Sbjct: 653 LVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 224/516 (43%), Gaps = 57/516 (11%)
Query: 30 LLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHY---ALRLFQHFPN 86
LLSKC+++ +Q H L GL KL V++ Y A +F P
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKL-----VSLYGFFGYTKDARLVFDQIPE 104
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
PD +++ ++R + + +H + D F+ ALK L G +
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRY-DDIVFSKALKACTELQDLDNGKK 163
Query: 147 LHCQAFR-HGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCG 205
+HCQ + FD V G L+ MY +CG+ +SA +VF+++ NVV W + + +
Sbjct: 164 IHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKND 221
Query: 206 DVAGARGVFGRMPVRNLT----------------------SW-----------------N 226
+F RM N+ W
Sbjct: 222 LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT 281
Query: 227 VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
+L Y K G++ ARRVF+E D V W+ MIVG HNGS ++A F+++ I+P
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
N V++ VLS C E G+ +HG K G ++ ++V NAL+ Y+KC A+ VF
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVF 400
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLV 406
M + IV+W SII+G + +G EAL LFH M V P+G+T SL AC+ G +
Sbjct: 401 E-MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459
Query: 407 EQGCEIFSKMKNLYGIEPTIEHYG-CMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL 465
G + + L + + H G ++D Y + A I N + W ++
Sbjct: 460 AVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTITWSAMI 518
Query: 466 GACSIHGN-IELAELVKARL-AEMDPNNSGDHVLLS 499
G G+ I EL + L + PN S +LS
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILS 554
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/559 (28%), Positives = 261/559 (46%), Gaps = 63/559 (11%)
Query: 27 WVSLLSKCSSLKPTKQ---IHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQH 83
++ L CS KQ IH + G ++ L +L+ + D H A +LF
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSN-LQLKDMLIDLYLKQGDVKH-ARKLFDR 72
Query: 84 FPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKP 143
D + +I F +M R V + F++ LK + G LK
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRED-VKANQFTYGSVLKSCKDLGCLKE 131
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA--- 200
G Q+H + ++ V + L+S+Y CG E AR FD M E ++V+WNA +
Sbjct: 132 GMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA 191
Query: 201 ----------------------CFRCGDVAGARGV------------------FGRMP-- 218
CF G + A V FGR
Sbjct: 192 NACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSAL 251
Query: 219 VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH-NGSFDQAFGFFR 277
+R+L + Y K G L A ++ +D +S + +I G + N AF F+
Sbjct: 252 IRSLVN------AYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFK 305
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFL-YISSVNNALIDTYSKC 336
+++R + +EV ++ +L C + G+ +HGF KS + + ++ N+LID Y+K
Sbjct: 306 DMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKS 365
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
G + A L F M + + SWTS+IAG HG+ E+A+ L++ ME ++P+ +TF+SL
Sbjct: 366 GEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSL 424
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP--I 454
L ACSH+G E G +I+ M N +GIE EH C++D+ R+ L +AY I +
Sbjct: 425 LSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIV 484
Query: 455 SPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSI 514
S ++ W L AC HGN++L+++ +L M+P +++ L++VYA G W + ++
Sbjct: 485 SLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNT 544
Query: 515 RRTMTEQ-SMVKTPGWSMI 532
R+ M E S K PG+S++
Sbjct: 545 RKLMKESGSCNKAPGYSLV 563
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 219/451 (48%), Gaps = 34/451 (7%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
LF N ++N++I F +MR DS + A + G
Sbjct: 275 LFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR--EDSRTLAAVINACIGLG 332
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVT 199
L+ G Q+HC A + G + V +TL+ MY +CG A ++F E+ + + N+ +
Sbjct: 333 FLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIK 392
Query: 200 ACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTM 259
F CG + A+ RVF + K +SW++M
Sbjct: 393 VYFSCGRIDDAK-------------------------------RVFERIENKSLISWNSM 421
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGF 319
G + NG + +F ++ + + +EVSL+ V+SACA + E G+ + G
Sbjct: 422 TNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGL 481
Query: 320 LYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
V+++LID Y KCG V + VF M V V W S+I+G A +G G EA+ LF
Sbjct: 482 DSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQGFEAIDLFK 540
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRA 439
+M +G+RP ITF+ +L AC++ GLVE+G ++F MK +G P EH+ CMVDL RA
Sbjct: 541 KMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 440 ARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLS 499
+ +A + +MP + +W ++L C +G + + ++ E++P NS +V LS
Sbjct: 601 GYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLS 660
Query: 500 NVYAVAGKWKDVVSIRRTMTEQSMVKTPGWS 530
++A +G W+ +R+ M E ++ K PG S
Sbjct: 661 AIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 176/364 (48%), Gaps = 37/364 (10%)
Query: 152 FRHGF-DTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGA 210
+ GF + V V L+ MY G AR +FDEMP+ N +WN + G+ +
Sbjct: 53 LKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTS 112
Query: 211 RGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFD 270
F MP R+ SWNV+++G+ KAGEL +ARR+F+ MP KD V+ ++++ G NG +
Sbjct: 113 LRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAE 172
Query: 271 QAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALI 330
+A F+EL + ++LT VL ACA+ A + GK +H + G S +N++L+
Sbjct: 173 EALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLV 229
Query: 331 DTYSKCGNVAMAQLVFR-----------------------NMSVG-------RSIVSWTS 360
+ Y+KCG++ MA + N S G R ++ W S
Sbjct: 230 NVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNS 289
Query: 361 IIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLY 420
+I+G + EAL LF+EM R D T +++ AC G +E G ++ +
Sbjct: 290 MISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACK-F 347
Query: 421 GIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELV 480
G+ I ++D+Y + +A + ++ S + ++ +++ G I+ A+ V
Sbjct: 348 GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE-SYDTILLNSMIKVYFSCGRIDDAKRV 406
Query: 481 KARL 484
R+
Sbjct: 407 FERI 410
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 178/429 (41%), Gaps = 68/429 (15%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALK 133
L A RLF P D N+L+ F ++ D+ + LK
Sbjct: 140 LSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL----NFSADAITLTTVLK 195
Query: 134 GVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVT 193
A +LK G Q+H Q G + + ++L+++Y +CGD A + +++ EP+ +
Sbjct: 196 ACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHS 255
Query: 194 WNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDD 253
+A ++ CG V +RG+F R R + WN M++GY
Sbjct: 256 LSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGY--------------------- 294
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
+A+N +A F E +R R + +L V++AC G E GK +H
Sbjct: 295 ---------IANNMKM-EALVLFNE-MRNETREDSRTLAAVINACIGLGFLETGKQMHCH 343
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM----------------SVGR---- 353
K G + V + L+D YSKCG+ A +F + S GR
Sbjct: 344 ACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDA 403
Query: 354 ----------SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHS 403
S++SW S+ G + +G E L+ FH+M + + D ++ S++ AC+
Sbjct: 404 KRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASI 463
Query: 404 GLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRT 463
+E G ++F++ + G++ ++DLY + + M + + V W +
Sbjct: 464 SSLELGEQVFAR-ATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNS 521
Query: 464 LLGACSIHG 472
++ + +G
Sbjct: 522 MISGYATNG 530
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 211/415 (50%), Gaps = 43/415 (10%)
Query: 160 VFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV 219
V + T L+ MY + D +A VFD+M N V+W A ++ C + +F M
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
Query: 220 RNLTSWNVMLAG----------------------------------------YTKAGELG 239
NL V L Y + G +
Sbjct: 245 ENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVS 304
Query: 240 LARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACA 299
L+R +F ++D V WS+MI G A G + ++ +EGI N V+L ++SAC
Sbjct: 305 LSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACT 364
Query: 300 QAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWT 359
+ F +H + K GF+ + NALID Y+KCG+++ A+ VF ++ + +VSW+
Sbjct: 365 NSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWS 423
Query: 360 SIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNL 419
S+I +HGHG EAL++F M + G D + F+++L AC+H+GLVE+ IF++
Sbjct: 424 SMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK- 482
Query: 420 YGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA-E 478
Y + T+EHY C ++L GR ++ A+E MP+ P+A IW +LL AC HG +++A +
Sbjct: 483 YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGK 542
Query: 479 LVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIE 533
++ L + +P+N ++VLLS ++ +G + +RR M + + K G+S IE
Sbjct: 543 IIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 176/372 (47%), Gaps = 45/372 (12%)
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
G QLHC + G D V +LISMY + + R+VFDEM + V++ + + +C +
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 204 CGDVAGARGV------FGRMPVRNLTSW------------------------------NV 227
G + A + +G +P L + +V
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 228 MLAG-----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE 282
+L+ Y K + A VF +M +K++VSW+ MI G N +++ FR + RE
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 283 GIRPNEVSLTGVLSACAQAG-ASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
+RPN V+L VL AC + S K +HGF + G + A + Y +CGNV++
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSL 305
Query: 342 AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
++++F V R +V W+S+I+G A G E + L ++M + G+ + +T ++++ AC+
Sbjct: 306 SRVLFETSKV-RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACT 364
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIW 461
+S L+ + S++ G I ++D+Y + L A E ++ + V W
Sbjct: 365 NSTLLSFASTVHSQILKC-GFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSW 422
Query: 462 RTLLGACSIHGN 473
+++ A +HG+
Sbjct: 423 SSMINAYGLHGH 434
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 136/318 (42%), Gaps = 34/318 (10%)
Query: 22 TLEPRWVSLLS---KCSSLK----PTKQIHTHLYVTGLHTHPLF---FGKLLLHCA-VTI 70
L P V+LLS C L K+IH + G H F + C V++
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSL 305
Query: 71 SDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAF 130
S L F+ D M++++I + QMR+ + +S +
Sbjct: 306 SRVL------FETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEG-IEANSVTLLA 358
Query: 131 ALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPN 190
+ N L + +H Q + GF +H+ +G LI MY +CG +AR VF E+ E +
Sbjct: 359 IVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Query: 191 VVTWNAAVTACFRCGDVAGARGVFGRM-----PVRNLTSWNVMLAGYTKAGELGLARRVF 245
+V+W++ + A G + A +F M V ++ ++ +L+ AG + A+ +F
Sbjct: 419 LVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDM-AFLAILSACNHAGLVEEAQTIF 477
Query: 246 SE-----MPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQ 300
++ MP+ + ++ I L G D A F + ++P+ + +LSAC
Sbjct: 478 TQAGKYHMPVTLE-HYACYINLLGRFGKIDDA---FEVTINMPMKPSARIWSSLLSACET 533
Query: 301 AGASEF-GKILHGFMEKS 317
G + GKI+ + KS
Sbjct: 534 HGRLDVAGKIIANELMKS 551
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 7/234 (2%)
Query: 262 GLAHNGSFDQAFGFFR-ELLREGIRPNEVSLTGVLSACA-QAGASEFGKILHGFMEKSGF 319
GL + +D+A ++ ++ G L V+ ACA Q G LH K+G
Sbjct: 19 GLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGA 78
Query: 320 LYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
+ V+N+LI Y+K + VF M + R VS+ SII G EA++L
Sbjct: 79 DCDTVVSNSLISMYAKFSRKYAVRKVFDEM-LHRDTVSYCSIINSCCQDGLLYEAMKLIK 137
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNL-YGIEPTIEHYGCMVDLYGR 438
EM G P SLL C+ G + +F + + ++ ++ +VD+Y +
Sbjct: 138 EMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLK 197
Query: 439 AARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIEL-AELVKARLAE-MDPN 490
A+ QM + N V W ++ C + N E+ +L +A E + PN
Sbjct: 198 FDDHAAAFHVFDQMEV-KNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPN 250
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 235 bits (599), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 143/516 (27%), Positives = 254/516 (49%), Gaps = 43/516 (8%)
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
R+F+ + + +I F +M + + P+ + L
Sbjct: 258 RIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK-SGIEPNLVTLYSVLSSCGLI 316
Query: 139 GSLKPGTQLHCQAFRHGFD-THVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA- 196
G ++ G +H A R D + + L+ +Y ECG V + + N+V WN+
Sbjct: 317 GLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSL 376
Query: 197 ----------------------------------AVTACFRCGDVAGARGVFG---RMPV 219
+++AC G V + + G R V
Sbjct: 377 ISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV 436
Query: 220 RNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL 279
+ N ++ Y+K+G + A VF+++ + V+W++M+ G + NG+ +A F +
Sbjct: 437 SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
Query: 280 LREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNV 339
+ NEV+ V+ AC+ G+ E GK +H + SG + + + ALID Y+KCG++
Sbjct: 497 YHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFT-DTALIDMYAKCGDL 555
Query: 340 AMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA 399
A+ VFR MS + +S+I MHG A+ F++M ESG +P+ + F+++L A
Sbjct: 556 NAAETVFRAMSSRSIVSW-SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSA 614
Query: 400 CSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAV 459
C HSG VE+G F+ MK+ +G+ P EH+ C +DL R+ L +AY I +MP +A
Sbjct: 615 CGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADAS 673
Query: 460 IWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMT 519
+W +L+ C IH +++ + +K L+++ +++G + LLSN+YA G+W++ +R M
Sbjct: 674 VWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMK 733
Query: 520 EQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAH 555
++ K PG+S IEI++ ++ F AGE+ T+E +
Sbjct: 734 SSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIY 769
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 229/490 (46%), Gaps = 49/490 (10%)
Query: 26 RWVSLLSKCSSLKPTKQIHTHLYVTG-LHTHPLFFGKLLLHCAVTISDALHYALRLFQHF 84
+++ L CSSL+ Q+H HL VTG L PL KL+ A S + +F+ F
Sbjct: 3 QYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSP--DSSRLVFEAF 60
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGS-LKP 143
P PD+FMY LI+ + ++ T F F L+ A L
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQIS-KFVFPSVLRACAGSREHLSV 119
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
G ++H + + G D + T+L+ MYG+ G+ A +VFD MP ++V W+ V++C
Sbjct: 120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 204 CGDVAGA-----------------------------------RGVFGRMPVR----NLTS 224
G+V A R V G++ + + T
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 225 WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
N +L Y+K G+L + R+F ++ K+ VSW+ MI ++A F E+++ GI
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFL-YISSVNNALIDTYSKCGNVAMAQ 343
PN V+L VLS+C G GK +HGF + S++ AL++ Y++CG ++ +
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCE 359
Query: 344 LVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHS 403
V R +S R+IV+W S+I+ A G +AL LF +M ++PD T S + AC ++
Sbjct: 360 TVLRVVS-DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 404 GLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRT 463
GLV G +I + + +++ ++D+Y ++ + A Q+ + V W +
Sbjct: 419 GLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQIK-HRSVVTWNS 475
Query: 464 LLGACSIHGN 473
+L S +GN
Sbjct: 476 MLCGFSQNGN 485
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 145/335 (43%), Gaps = 41/335 (12%)
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
++ Y G +R VF P D + +I D A + L+ E + +
Sbjct: 40 LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQIS 99
Query: 288 EVSLTGVLSACAQAGASE---FGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
+ VL ACA G+ E G +HG + K G + + +L+ Y + GN++ A+
Sbjct: 100 KFVFPSVLRACA--GSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEK 157
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
VF M V R +V+W+++++ +G +AL++F M + GV PD +T IS++ C+ G
Sbjct: 158 VFDGMPV-RDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 405 ------------------LVEQGCE----IFSKMKNLYGIEPTIEH--------YGCMVD 434
L E C ++SK +L E E + M+
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 435 LYGRAARLHKAYEFICQM---PISPNAVIWRTLLGACSIHGNIELAELVK--ARLAEMDP 489
Y R KA +M I PN V ++L +C + G I + V A E+DP
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 490 NNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMV 524
N + L +YA GK D ++ R ++++++V
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIV 371
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 254/531 (47%), Gaps = 44/531 (8%)
Query: 40 TKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXX 99
T+++H+ + + L P F +L A ++D L A +LF FP F++N++IR
Sbjct: 24 TQKLHSFVTKSKLARDPYFATQLARFYA--LNDDLISARKLFDVFPERSVFLWNSIIRAY 81
Query: 100 XXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTH 159
F Q+ R T PD+F++A +G + K +H A G
Sbjct: 82 AKAHQFTTVLSLFSQILRSDTR-PDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFD 140
Query: 160 VFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM-- 217
G+ ++ Y + G A ++F +P+P++ WN + CG +F M
Sbjct: 141 QICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH 200
Query: 218 -------------------PVRNLTSWNV------------------MLAGYTKAGELGL 240
P L +W+V ++ Y++ +
Sbjct: 201 RGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIAS 260
Query: 241 ARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQ 300
A VF+ + D V+ S++I G + G+ +A F EL G +P+ V + VL +CA+
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAE 320
Query: 301 AGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTS 360
S GK +H ++ + G V +ALID YSKCG + A +F + ++IVS+ S
Sbjct: 321 LSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNS 379
Query: 361 IIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLY 420
+I GL +HG A + F E+ E G+ PD ITF +LL C HSGL+ +G EIF +MK+ +
Sbjct: 380 LILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEF 439
Query: 421 GIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELV 480
GIEP EHY MV L G A +L +A+EF+ + ++ I LL C +H N LAE+V
Sbjct: 440 GIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVV 499
Query: 481 KARLAEM-DPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWS 530
+ + + S V+LSNVYA G+W +V +R ++E K PG S
Sbjct: 500 AENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 160/402 (39%), Gaps = 66/402 (16%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y +L AR++F P + W+++I A F F ++LR RP+ +
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY 109
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
+ +++ ++ + +HG SG + +A++ YSK G + A +F ++
Sbjct: 110 ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIP- 168
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
+ W +I G G ++ + LF+ M+ G +P+ T ++L SGL++
Sbjct: 169 DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALT-----SGLIDPSLL 223
Query: 412 IFSKMKNLYGIEPTIE---HYGC-MVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGA 467
+ + + + ++ ++ + GC +V++Y R + A + P+ V +L+
Sbjct: 224 LVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLITG 282
Query: 468 CSIHGNIE-------------------LAELVKARLAEMDPNNSGDHV------------ 496
S GN + L +V AE+ + SG V
Sbjct: 283 YSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELD 342
Query: 497 -----LLSNVYAVAGKWKDVVSIRRTMTEQSMVK---------TPGWSMIEINKVMYGFV 542
L ++Y+ G K +S+ + E+++V G++ K
Sbjct: 343 IKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILE 402
Query: 543 AGEKPNEVTEEA----------HDKLREIMLRLRAEAGYAPQ 574
G P+E+T A +K +EI R+++E G PQ
Sbjct: 403 MGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 225/440 (51%), Gaps = 37/440 (8%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PDS++F + + + G H QA +HG D + V +L+ MY CG + A+++
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLAR 242
F E+ P R++ SWN ++AG + G++ A
Sbjct: 176 FVEI-------------------------------PKRDIVSWNSIIAGMVRNGDVLAAH 204
Query: 243 RVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG 302
++F EMP K+ +SW+ MI + + FRE++R G + NE +L +L+AC ++
Sbjct: 205 KLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSA 264
Query: 303 ASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSII 362
+ G+ +H + ++ ++ ALID Y KC V +A+ +F ++S+ R+ V+W +I
Sbjct: 265 RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSI-RNKVTWNVMI 323
Query: 363 AGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGI 422
+HG E L+LF M +RPD +TF+ +L C+ +GLV QG +S M + + I
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQI 383
Query: 423 EPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAEL 479
+P H CM +LY A +A E + +P ++P + W LL + GN L E
Sbjct: 384 KPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGES 443
Query: 480 VKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMY 539
+ L E DP N + LL N+Y+V G+W+DV +R + E+ + + PG ++++ ++++
Sbjct: 444 IAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Query: 540 GFVAGEKPNE--VTEEAHDK 557
G G K E TE + +K
Sbjct: 504 GLRLGCKEAEKVFTETSLEK 523
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 34/236 (14%)
Query: 271 QAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALI 330
QA GF+ ++LR G P+ + ++S + + GK+ HG K G + V N+L+
Sbjct: 101 QALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLM 160
Query: 331 DTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAG-------LAMHGHGEE---------- 373
Y+ CG + +A+ +F + R IVSW SIIAG LA H +E
Sbjct: 161 HMYTCCGALDLAKKLFVEIP-KRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWN 219
Query: 374 --------------ALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNL 419
++ LF EM +G + + T + LL AC S +++G + + +
Sbjct: 220 IMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRT 279
Query: 420 YGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIE 475
+ + ++ ++D+YG+ + A + I N V W ++ A +HG E
Sbjct: 280 F-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILAHCLHGRPE 333
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 125/321 (38%), Gaps = 22/321 (6%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A +LF P+ + +N +I F +M R +S + L
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNES-TLVLLLNACG 261
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA 196
LK G +H R ++ V + T LI MYG+C + ARR+FD + N VTWN
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 321
Query: 197 AVTACFRCGDVAGARGVFGRMPVRNLTSWNV----MLAGYTKAGELGLARRVFS----EM 248
+ A G G +F M L V +L G +AG + + +S E
Sbjct: 322 MILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEF 381
Query: 249 PLKDDVSWSTMIVGLAHNGSF-DQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFG 307
+K + + L + F ++A + L E + P +LS+ G G
Sbjct: 382 QIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLG 441
Query: 308 K-ILHGFMEKSGFLYISSVNNALIDTYSKCG---NVAMAQLVFRNMSVGR----SIVSWT 359
+ I +E Y + L++ YS G +V + + + +GR +V
Sbjct: 442 ESIAKSLIETDPLNY--KYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLK 499
Query: 360 SIIAGLAMHGHGEEALQLFHE 380
I+ GL + +EA ++F E
Sbjct: 500 EIVHGLRL--GCKEAEKVFTE 518
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 237/519 (45%), Gaps = 49/519 (9%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALK 133
L A+ LF D +N+LI + +M R +++ LK
Sbjct: 199 LDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLT-TYALGSVLK 257
Query: 134 GVA---NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPN 190
N G ++ G +HC + G + + V T L+ MY + G + A ++F MP N
Sbjct: 258 ACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKN 317
Query: 191 VVTWNAAVTACFRCGDVAG-----ARGVFGRMPVRNL----TSWNVMLAGYTKAGELGLA 241
VVT+NA ++ + ++ A +F M R L ++++V+L + A L
Sbjct: 318 VVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Query: 242 RRV-----------------------------------FSEMPLKDDVSWSTMIVGLAHN 266
R++ F+ +D SW++MI N
Sbjct: 378 RQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQN 437
Query: 267 GSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN 326
+ AF FR+L IRP E +++ ++SACA A G+ + G+ KSG +SV
Sbjct: 438 EQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVK 497
Query: 327 NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGV 386
+ I Y+K GN+ +A VF + + +++++I+ LA HG EAL +F M+ G+
Sbjct: 498 TSSISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLAQHGSANEALNIFESMKTHGI 556
Query: 387 RPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAY 446
+P+ F+ +L AC H GLV QG + F MKN Y I P +H+ C+VDL GR RL A
Sbjct: 557 KPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAE 616
Query: 447 EFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAG 506
I + V WR LL +C ++ + + + V RL E++P SG +VLL N+Y +G
Sbjct: 617 NLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSG 676
Query: 507 KWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGE 545
+R M ++ + K P S I I + F +
Sbjct: 677 VNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVAD 715
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 189/451 (41%), Gaps = 59/451 (13%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALK 133
L +A +LF P + +N+LI F++ R + D F++A AL
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLE-AREANLKLDKFTYAGALG 156
Query: 134 GVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVT 193
L G LH +G VF+ LI MY +CG + A +FD E + V+
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 194 WNAAVTACFRCGDVAGARGVFGRM--PVRNLTSW-------------------------- 225
WN+ ++ R G + +M NLT++
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 226 --------------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH-----N 266
+L Y K G L A ++FS MP K+ V+++ MI G +
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 267 GSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVN 326
+ +AF F ++ R G+ P+ + + VL AC+ A E+G+ +H + K+ F +
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396
Query: 327 NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGV 386
+ALI+ Y+ G+ F + S + I SWTS+I + E A LF ++ S +
Sbjct: 397 SALIELYALMGSTEDGMQCFASTS-KQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI 455
Query: 387 RPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCM----VDLYGRAARL 442
RP+ T ++ AC+ + G +I Y I+ I+ + + + +Y ++ +
Sbjct: 456 RPEEYTVSLMMSACADFAALSSGEQIQG-----YAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGN 473
A + ++ +P+ + ++ + + HG+
Sbjct: 511 PLANQVFIEVQ-NPDVATYSAMISSLAQHGS 540
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 11/258 (4%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y K ELG AR++F MP ++ +S++++I G G ++QA F E ++ ++ +
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
G L C + + G++LHG + +G + N LID YSKCG + A +F
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD- 210
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS---HSGLVEQ 408
R VSW S+I+G G EE L L +M G+ S+L AC + G +E+
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 409 GCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGAC 468
G I L G+E I ++D+Y + L +A + MP S N V + +
Sbjct: 271 GMAIHCYTAKL-GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAM---- 324
Query: 469 SIHGNIELAELVKARLAE 486
I G +++ E+ +E
Sbjct: 325 -ISGFLQMDEITDEASSE 341
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 151/336 (44%), Gaps = 48/336 (14%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
DS + + A GS+ G H + + +++ L++MY +C + AR++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 184 DEMPEPNVVTWNAAVTACFRCG----------------------DVAGARG--------- 212
D MPE N++++N+ ++ + G AGA G
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 213 ----VFGRMPVRNLTSW----NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
+ G + V L+ NV++ Y+K G+L A +F +D VSW+++I G
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACA---QAGASEFGKILHGFMEKSGFLY 321
G+ ++ ++ R+G+ +L VL AC G E G +H + K G +
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH-----GEEALQ 376
V AL+D Y+K G++ A +F M +++V++ ++I+G EA +
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMDEITDEASSEAFK 344
Query: 377 LFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEI 412
LF +M+ G+ P TF +L ACS + +E G +I
Sbjct: 345 LFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 184/318 (57%), Gaps = 3/318 (0%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y +GE+ A +VF EMP ++ VSW+ MI G A D + ++ + PN+ +
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
T +LSAC +GA G+ +H G ++N+LI Y KCG++ A +F S
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS- 283
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFH-EMEESGVRPDGITFISLLYACSHSGLVEQGC 410
+ +VSW S+IAG A HG +A++LF M +SG +PD IT++ +L +C H+GLV++G
Sbjct: 284 NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR 343
Query: 411 EIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSI 470
+ F+ M +G++P + HY C+VDL GR L +A E I MP+ PN+VIW +LL +C +
Sbjct: 344 KFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRV 402
Query: 471 HGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWS 530
HG++ ++P+ + HV L+N+YA G WK+ ++R+ M ++ + PG S
Sbjct: 403 HGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCS 462
Query: 531 MIEINKVMYGFVAGEKPN 548
IEIN ++ F A + N
Sbjct: 463 WIEINNYVFMFKAEDGSN 480
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D++ + A++ + G+ HC A + GF + V++G++L+ +Y + G+ E+A +VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 184 DEMPEPNVVTWNAAV-----------------------------------TACFRCGDVA 208
+EMPE NVV+W A + +AC G +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 209 GARGVFGRMPVRNLTSW----NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLA 264
R V + L S+ N +++ Y K G+L A R+F + KD VSW++MI G A
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 265 HNGSFDQAFGFFRELL-REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS 323
+G QA F ++ + G +P+ ++ GVLS+C AG + G+ M + G
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL 358
Query: 324 SVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHG 369
+ + L+D + G + A + NM + + V W S++ +HG
Sbjct: 359 NHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 7/204 (3%)
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
R+G + L+ + +C G H K GF+ + ++L+ Y G V
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 341 MAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
A VF M R++VSWT++I+G A + L+L+ +M +S P+ TF +LL AC
Sbjct: 173 NAYKVFEEMP-ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSAC 231
Query: 401 SHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI 460
+ SG + QG + + ++ G++ + ++ +Y + L A+ Q + + V
Sbjct: 232 TGSGALGQGRSVHCQTLHM-GLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVS 289
Query: 461 WRTLLGACSIHG----NIELAELV 480
W +++ + HG IEL EL+
Sbjct: 290 WNSMIAGYAQHGLAMQAIELFELM 313
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 238/492 (48%), Gaps = 44/492 (8%)
Query: 81 FQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGS 140
F+ + D F + ++I F +M+ + + PD + + +
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ-NKGMHPDGVVISCLINELGKMML 346
Query: 141 LKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEP-NVVTWN---- 195
+ G H RH F V +L+SMY + A ++F + E N WN
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 196 -------------------------------AAVTACFRCGDVAGARGVFGRMPVRNL-- 222
+ +++C G V + + + +L
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 223 --TSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELL 280
+ N ++ Y K G+L +A R+F E + ++W+ MI H ++A F ++
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMV 525
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
E +P+ ++L +L AC G+ E G+++H ++ ++ S++ ALID Y+KCG++
Sbjct: 526 SENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLE 585
Query: 341 MAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
++ +F + + V W +I+G MHG E A+ LF +MEES V+P G TF++LL AC
Sbjct: 586 KSRELF-DAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSAC 644
Query: 401 SHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVI 460
+H+GLVEQG ++F KM Y ++P ++HY C+VDL R+ L +A + MP SP+ VI
Sbjct: 645 THAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVI 703
Query: 461 WRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTE 520
W TLL +C HG E+ + R DP N G +++L+N+Y+ AGKW++ R M E
Sbjct: 704 WGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRE 763
Query: 521 QSMVKTPGWSMI 532
+ K G S++
Sbjct: 764 SGVGKRAGHSVV 775
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 209/483 (43%), Gaps = 49/483 (10%)
Query: 28 VSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNP 87
V L + SL+ ++ H L +TG + +F L+ + + + R+F
Sbjct: 31 VILCDQSLSLESLRK-HNALIITGGLSENIFVASKLISSYASYGKP-NLSSRVFHLVTRR 88
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
D F++N++I+ F M PD F+ + A GT +
Sbjct: 89 DIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS-PDHFTAPMVVSACAELLWFHVGTFV 147
Query: 148 HCQAFRHG-FDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
H +HG FD + VG + + Y +CG + A VFDEMP+ +VV W A ++ + G+
Sbjct: 148 HGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE 207
Query: 207 VAGARGVFGRM-------------------------------------PVRN-LTS---- 224
G G +M V+N L S
Sbjct: 208 SEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFV 267
Query: 225 WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
+ M + Y+K+G A F E+ +D SW+++I LA +G +++F F E+ +G+
Sbjct: 268 QSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM 327
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
P+ V ++ +++ + GK HGF+ + F S+V N+L+ Y K +++A+
Sbjct: 328 HPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEK 387
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
+F +S + +W +++ G + ++LF +++ G+ D + S++ +CSH G
Sbjct: 388 LFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIG 447
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
V G + + ++ TI ++DLYG+ L A+ C+ N + W +
Sbjct: 448 AVLLGKSLHCYVVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMFCE--ADTNVITWNAM 504
Query: 465 LGA 467
+ +
Sbjct: 505 IAS 507
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 9/253 (3%)
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
+++ Y G+ L+ RVF + +D W+++I NG + ++ FF +L G P+
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPD 124
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEK-SGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
+ V+SACA+ G +HG + K GF ++V + + YSKCG + A LVF
Sbjct: 125 HFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF 184
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGV---RPDGITFISLLYACSHS 403
M R +V+WT+II+G +G E L +M +G +P+ T ACS+
Sbjct: 185 DEMP-DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNL 243
Query: 404 GLVEQG-CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWR 462
G +++G C +KN G+ + M Y ++ +AY ++ + W
Sbjct: 244 GALKEGRCLHGFAVKN--GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG-DEDMFSWT 300
Query: 463 TLLGACSIHGNIE 475
+++ + + G++E
Sbjct: 301 SIIASLARSGDME 313
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 259/553 (46%), Gaps = 56/553 (10%)
Query: 66 CAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDS 125
C SD+L A +LF D ++ +IR F +M PD
Sbjct: 168 CMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDC 226
Query: 126 FSFAFALKGVANGGSLKPGTQLHCQAFRHGFD-THVFVGTTLISMYGECGDSESARRVFD 184
+ LK + G +H + R GFD VFV +LI MY + D +SA RVFD
Sbjct: 227 VTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFD 286
Query: 185 EMPEPNVVTWNA-------------------------------AVTACFR---------- 203
E N+V+WN+ V + R
Sbjct: 287 ETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLP 346
Query: 204 CGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGL 263
C + G + R N + + ++ YT + A V M KD VS STMI GL
Sbjct: 347 CKSIHGV--IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGL 404
Query: 264 AHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGF-MEKSGFLYI 322
AH G D+A F + R+ PN +++ +L+AC+ + K HG + +S +
Sbjct: 405 AHAGRSDEAISIFCHM-RD--TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIND 461
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
SV +++D Y+KCG + MA+ F ++ ++I+SWT II+ A++G ++AL LF EM+
Sbjct: 462 ISVGTSIVDAYAKCGAIEMARRTFDQIT-EKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
+ G P+ +T+++ L AC+H GLV++G IF M +P+++HY C+VD+ RA +
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEI 579
Query: 443 HKAYEFICQMP--ISPNAVIWRTLLGAC-SIHGNIELAELVKARLAEMDPNNSGDHVLLS 499
A E I +P + A W +L C + + + V A + E++P S ++L S
Sbjct: 580 DTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLAS 639
Query: 500 NVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLR 559
+ +A W+DV +RR + E+ + G+SM+ + F+AG+K ++ E +D ++
Sbjct: 640 STFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQ 699
Query: 560 EI--MLRLRAEAG 570
+ ++L AG
Sbjct: 700 SLHRCMKLDDTAG 712
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 17/238 (7%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y K G+L R F M +D VSW+ ++ GL G ++ +F +L G PN +L
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
V+ AC G+ +HG++ +SGF ISSV N+++ Y+ +++ A+ +F MS
Sbjct: 131 VLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMS- 186
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEM-EESGVRPDGITFISLLYACSHSGLVEQGC 410
R ++SW+ +I L+LF EM E+ PD +T S+L AC+ ++ G
Sbjct: 187 ERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGR 246
Query: 411 EI--FSKMKNLYGIEPTIEHYGC--MVDLYGRAARLHKAY----EFICQMPISPNAVI 460
+ FS + + + C ++D+Y + + A+ E C+ +S N+++
Sbjct: 247 SVHGFSIRRGF----DLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 119/309 (38%), Gaps = 34/309 (11%)
Query: 28 VSLLSKCSSLK---PTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHF 84
VSLL C + P K IH + G ++ + L+ A T + A +
Sbjct: 332 VSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLID--AYTSCSLVDDAGTVLDSM 389
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
D +T+I F MR P ++ + L + L+
Sbjct: 390 TYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP----NAITVISLLNACSVSADLRTS 445
Query: 145 TQLHCQAFRHGFDTH-VFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
H A R + + VGT+++ Y +CG E ARR FD++ E N+++W ++A
Sbjct: 446 KWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI 505
Query: 204 CGDVAGARGVFGRMPVRNLTSWNVM-LAGYTKAGELGLARR---VFSEMPLKDDVS---- 255
G A +F M + T V LA + GL ++ +F M +D
Sbjct: 506 NGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQH 565
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
+S ++ L+ G D A + L P +V +AGAS +G IL G
Sbjct: 566 YSCIVDMLSRAGEIDTAVELIKNL------PEDV----------KAGASAWGAILSGCRN 609
Query: 316 KSGFLYISS 324
+ L I+S
Sbjct: 610 RFKKLIITS 618
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 216/409 (52%), Gaps = 23/409 (5%)
Query: 161 FVGTTLISMYGECGDSESARRVF-------DEMPEPNVVTWNAAVTACFRCGDVAGARGV 213
FV T+I + R F +E P+ +T++ + AC + + + +
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 214 FGRMPVRN---LTSWNV---MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNG 267
+ V+N L+ +V +L Y + L AR+VF E+P D V W ++ G G
Sbjct: 139 HCWV-VKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 268 SFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS-VN 326
+ F+E+L GI P+E S+T L+ACAQ GA GK +H F++K ++ V
Sbjct: 198 LGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVG 257
Query: 327 NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME-ESG 385
AL+D Y+KCG + A VF ++ R++ SW ++I G A +G+ ++A +E E G
Sbjct: 258 TALVDMYAKCGCIETAVEVFEKLT-RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDG 316
Query: 386 VRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKA 445
++PD + + +L AC+H G +E+G + M+ YGI P EHY C+VDL RA RL A
Sbjct: 317 IKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDA 376
Query: 446 YEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDH----VLLSNV 501
+ I +MP+ P A +W LL C H N+EL EL L +++ N + V LSN+
Sbjct: 377 LDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNI 436
Query: 502 YAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGE--KPN 548
Y + + +R + ++ + KTPGWS++E++ ++ FV+G+ PN
Sbjct: 437 YFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPN 485
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 180/433 (41%), Gaps = 55/433 (12%)
Query: 18 AMSNTLEPRWVSLL---SKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLL---LHCAVTIS 71
++ ++ W SL+ +C+++K K H+ + GLH + KLL LH ++
Sbjct: 2 SVVSSFHQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLP-NLN 60
Query: 72 DALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHP--TVFPDSFSFA 129
HYA +F P++F+Y+T+IR F+ M + + P +F
Sbjct: 61 KHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFH 120
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHG-FDTHVFVGTTLISMYGECGDSESARRVFDEMPE 188
F + G Q+HC ++G F + V T ++ +Y E AR+VFDE+P+
Sbjct: 121 FLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQ 180
Query: 189 PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLT----------------------SW- 225
P+VV W+ + RCG + VF M VR + W
Sbjct: 181 PDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWI 240
Query: 226 -----------------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGS 268
++ Y K G + A VF ++ ++ SW+ +I G A G
Sbjct: 241 HEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGY 300
Query: 269 FDQAFGFFRELLRE-GIRPNEVSLTGVLSACAQAGASEFGKILHGFME-KSGFLYISSVN 326
+A + RE GI+P+ V L GVL+ACA G E G+ + ME + G
Sbjct: 301 AKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHY 360
Query: 327 NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH---GEEALQLFHEMEE 383
+ ++D + G + A + M + W +++ G H + GE A+Q ++E+
Sbjct: 361 SCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEK 420
Query: 384 SGVRPDGITFISL 396
V + + L
Sbjct: 421 GNVEEEEAALVQL 433
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 260/552 (47%), Gaps = 51/552 (9%)
Query: 7 FIPTPSSGTEEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHC 66
+ T + GT+ A+S+ + + SKC K I V + + + +
Sbjct: 151 LVKTGNDGTKFAVSSL-----IHMYSKCGKFKEVCNIFNGSCVEFVDS----VARNAMIA 201
Query: 67 AVTISDALHYALRLFQHFPN-PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDS 125
A + AL +F P DT +NTLI + M + + D
Sbjct: 202 AYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKW-DE 260
Query: 126 FSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGD---SESARRV 182
SF L +++ SLK G ++H + ++G ++ FV + ++ +Y +CG+ +ESA +
Sbjct: 261 HSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLL 320
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLAR 242
+ FG NL S + M+ GY+ G++ A+
Sbjct: 321 YG-----------------------------FG-----NLYSASSMIVGYSSQGKMVEAK 346
Query: 243 RVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELL-REGIRPNEVSLTGVLSACAQA 301
R+F + K+ V W+ M +G + D R + E P+ + + VL AC+
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQ 406
Query: 302 GASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSI 361
E GK +HG ++G L + A +D YSKCGNV A+ +F + S R V + ++
Sbjct: 407 AYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIF-DSSFERDTVMYNAM 465
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYG 421
IAG A HGH ++ Q F +M E G +PD ITF++LL AC H GLV +G + F M Y
Sbjct: 466 IAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYN 525
Query: 422 IEPTIEHYGCMVDLYGRAARLHKAYEFICQMP-ISPNAVIWRTLLGACSIHGNIELAELV 480
I P HY CM+DLYG+A RL KA E + + + +AVI L ACS + N EL + V
Sbjct: 526 ISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEV 585
Query: 481 KARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYG 540
+ +L ++ +N ++ ++N YA +G+W ++ IR M + + G S I+K +
Sbjct: 586 EEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHM 645
Query: 541 FVAGEKPNEVTE 552
F + + + TE
Sbjct: 646 FTSSDISHYETE 657
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 22/293 (7%)
Query: 141 LKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTA 200
LK G H ++ + G L+++Y + G AR VFDEM E NV +WNA + A
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 201 CFRCGDVAGARGVFGRMPV-RNLTSWNVMLAGYTKA-GELGLARRVFSEMPLK------- 251
+ +V AR +F R+L ++N +L+G+ K G A +F EM K
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 252 DDVSWSTMI---VGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK 308
DD + +TM+ L + +Q G + +G + SL + S C + E
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGK--FKEVCN 181
Query: 309 ILHGFMEKSGFLYISSV-NNALIDTYSKCGNVAMAQLVF-RNMSVGRSIVSWTSIIAGLA 366
I +G S ++ SV NA+I Y + G++ A VF RN + +I SW ++IAG A
Sbjct: 182 IFNG----SCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTI-SWNTLIAGYA 236
Query: 367 MHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK-MKN 418
+G+ EEAL++ MEE+G++ D +F ++L S ++ G E+ ++ +KN
Sbjct: 237 QNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKN 289
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 167/423 (39%), Gaps = 72/423 (17%)
Query: 88 DTFMYNTLIRXXXXXXX-XXXXXHPFIQMRRHPT--VFPDSFSFAFALKGVANGGSLKPG 144
D YNTL+ F +M R ++ D F+ +K A ++ G
Sbjct: 85 DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDE--MPEPNVVTWNAAVTACF 202
QLH + G D F ++LI MY +CG + +F+ + + V NA + A
Sbjct: 145 EQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYC 204
Query: 203 RCGDVAGARGVFGRMPVRNLT-SWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIV 261
R GD+ A VF R P N T SWN ++AGY + G + E LK M V
Sbjct: 205 REGDIDKALSVFWRNPELNDTISWNTLIAGYAQNG--------YEEEALK-------MAV 249
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLY 321
+ N G++ +E S VL+ + + + GK +H + K+G
Sbjct: 250 SMEEN----------------GLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYS 293
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
V++ ++D Y KCGN+ A+ G ++ S +S+I G + G EA +LF +
Sbjct: 294 NKFVSSGIVDVYCKCGNMKYAESAHLLYGFG-NLYSASSMIVGYSSQGKMVEAKRLFDSL 352
Query: 382 EESGV--------------------------------RPDGITFISLLYACSHSGLVEQG 409
E + PD + +S+L ACS +E G
Sbjct: 353 SEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPG 412
Query: 410 CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACS 469
EI GI + VD+Y + + A E I + V++ ++ C+
Sbjct: 413 KEIHGHSLRT-GILMDKKLVTAFVDMYSKCGNVEYA-ERIFDSSFERDTVMYNAMIAGCA 470
Query: 470 IHG 472
HG
Sbjct: 471 HHG 473
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 180/316 (56%), Gaps = 9/316 (2%)
Query: 241 ARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQ 300
AR+VF E+P D V W ++ G G + FRE+L +G+ P+E S+T L+ACAQ
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 301 AGASEFGKILHGFMEKSGFLYISS-VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWT 359
GA GK +H F++K ++ V AL+D Y+KCG + A VF+ ++ R++ SW
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT-RRNVFSWA 289
Query: 360 SIIAGLAMHGHGEEALQLFHEME-ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
++I G A +G+ ++A+ +E E G++PD + + +L AC+H G +E+G + M+
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 419 LYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAE 478
Y I P EHY C+VDL RA RL A I +MP+ P A +W LL C H N+EL E
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGE 409
Query: 479 LVKARLAEMDPNNSGDH----VLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEI 534
L L +++ N + V LSN+Y + + +R + ++ + KTPGWS++E+
Sbjct: 410 LAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEV 469
Query: 535 NKVMYGFVAGE--KPN 548
+ + FV+G+ PN
Sbjct: 470 DGNVTKFVSGDVSHPN 485
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 182/435 (41%), Gaps = 59/435 (13%)
Query: 18 AMSNTLEPRWVSLL---SKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLL---LHCAVTIS 71
++ ++ W SL+ +C+++K K H+ + GLH + KLL LH ++
Sbjct: 2 SVVSSFHQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLP-NLN 60
Query: 72 DALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHP--TVFPDSFSFA 129
HYA +F P++F+Y+T+IR F+ M + + P +F
Sbjct: 61 KHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFH 120
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGF---DTHVFVGTTLISMYGECGDSESARRVFDEM 186
F + G Q+HC ++G D+HV G ++ +Y E AR+VFDE+
Sbjct: 121 FLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTG--VLRIYVEDKLLLDARKVFDEI 178
Query: 187 PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL------------------------ 222
P+P+VV W+ + RCG + VF M V+ L
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGK 238
Query: 223 --------TSW--------NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHN 266
SW ++ Y K G + A VF ++ ++ SW+ +I G A
Sbjct: 239 WIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAY 298
Query: 267 GSFDQAFGFFRELLRE-GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSV 325
G +A L RE GI+P+ V L GVL+ACA G E G+ + ME +
Sbjct: 299 GYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHE 358
Query: 326 N-NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH---GEEALQLFHEM 381
+ + ++D + G + A + M + W +++ G H + GE A++ ++
Sbjct: 359 HYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDL 418
Query: 382 EESGVRPDGITFISL 396
E+ V + + L
Sbjct: 419 EKGNVEEEEAALVQL 433
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 35/387 (9%)
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG 337
ELL +G P+ + +CA + E K +H +S F +NN +I + +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 338 NVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLL 397
++ A+ VF +M V + + SW ++ + +G G++AL LF EM + G++P+ TF+++
Sbjct: 286 SITDAKRVFDHM-VDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 398 YACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPN 457
AC+ G +E+ F MKN +GI P EHY ++ + G+ L +A ++I +P P
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 458 AVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRT 517
A W + +HG+I+L + ++ + ++DP+ AV K ++
Sbjct: 405 ADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSK-----------AVINKIP--TPPPKS 451
Query: 518 MTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAG--YAPQV 575
E +MV + + N Y A E + A+ G Y P
Sbjct: 452 FKETNMVTSKSRILEFRNLTFYKDEAKE-------------------MAAKKGVVYVPDT 492
Query: 576 RGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKF 635
R VLHDI++E KE ++ HSE+LA A+GI P K L I+KNLRVCGDCH +K++SK
Sbjct: 493 RFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKI 552
Query: 636 YQVEIIVRDRSRFHLFKDGLCSCRDYW 662
+IVRD RFH FKDG CSC DYW
Sbjct: 553 IGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N++++ + + + A+RVF M KD SW M+ + NG D A F E+ + G++
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN------------ALIDTY 333
PNE + V ACA G E FL+ S+ N ++
Sbjct: 335 PNEETFLTVFLACATVGGIE-----------EAFLHFDSMKNEHGISPKTEHYLGVLGVL 383
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHG 369
KCG++ A+ R++ + W ++ +HG
Sbjct: 384 GKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 214/432 (49%), Gaps = 42/432 (9%)
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
G Q+H A + G++ + V ++MY D +A +VF+ + E ++VTWN +++ +
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 204 CGDVAGARGVFGRMPV------------------------------------RNLTSWNV 227
A V+ RM + + N
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNA 426
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR-- 285
+++ Y+K G++ A +F K+ +SW+ +I G HNG + F LL +R
Sbjct: 427 LISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL 486
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
P+ +L+ +LS C + G H ++ + G + + NALI+ YS+CG + + V
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG-VRPDGITFISLLYACSHSG 404
F MS + +VSW S+I+ + HG GE A+ + M++ G V PD TF ++L ACSH+G
Sbjct: 547 FNQMS-EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEF--ICQMPISPNAVIWR 462
LVE+G EIF+ M +G+ ++H+ C+VDL GRA L +A I + I +W
Sbjct: 606 LVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWW 665
Query: 463 TLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQS 522
L AC+ HG+++L ++V L E + ++ +V LSN+YA AG WK+ RR +
Sbjct: 666 ALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIG 725
Query: 523 MVKTPGWSMIEI 534
+K G S + +
Sbjct: 726 AMKQRGCSWMRL 737
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 174/366 (47%), Gaps = 56/366 (15%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYG 171
F + R T+ PD +S + A+ + G Q+HC A R G H V TL+S+Y
Sbjct: 44 FADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYE 103
Query: 172 ECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG 231
G+ S ++ FDE+ EP+V SW +L+
Sbjct: 104 RLGNLASLKKKFDEIDEPDVY-------------------------------SWTTLLSA 132
Query: 232 YTKAGELGLARRVFSEMPLKDDVS-WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
K G++ A VF +MP +DDV+ W+ MI G +G + + FRE+ + G+R ++
Sbjct: 133 SFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFG 192
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS 350
+LS C G+ +FGK +H + K+GF SSV NALI Y C V A LVF
Sbjct: 193 FATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETD 251
Query: 351 VG-RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS-------- 401
V R V++ +I GLA +E+L +F +M E+ +RP +TF+S++ +CS
Sbjct: 252 VAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQV 310
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIW 461
H ++ G E ++ + N T+ Y D +G A HK +E + + + V W
Sbjct: 311 HGLAIKTGYEKYTLVSN-----ATMTMYSSFED-FGAA---HKVFESLEE----KDLVTW 357
Query: 462 RTLLGA 467
T++ +
Sbjct: 358 NTMISS 363
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
+ PD+++ + L + SL G+Q H RHG +G LI+MY +CG +++
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 181 RVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP-----VRNLTSWNVMLAGYTKA 235
VF++M E +VV+WN+ ++A R G+ A + M + + +++ +L+ + A
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHA 604
Query: 236 GELGLARRVFSEM-----PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
G + +F+ M +++ +S ++ L G D+A + + E + V
Sbjct: 605 GLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK--ISEKTIGSRVD 662
Query: 291 L-TGVLSACAQAGASEFGKILHG-FMEK 316
+ + SACA G + GK++ MEK
Sbjct: 663 VWWALFSACAAHGDLKLGKMVAKLLMEK 690
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 32/178 (17%)
Query: 260 IVGLAHNGSFDQAFGFFRELLR-EGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG 318
+ GL +G A F ++ R +RP++ S++ ++ + FG +H + +SG
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 319 FLYISSVNNALIDTYSKCGNVA-------------------------------MAQLVFR 347
L S V+N L+ Y + GN+A A VF
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 348 NMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
M + W ++I G G+ E +++LF EM + GVR D F ++L C + L
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSL 205
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 246/519 (47%), Gaps = 58/519 (11%)
Query: 61 KLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPT 120
L+L C V I + +A LF P D N+ + F+Q+ R
Sbjct: 22 NLVLRC-VFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRAS- 79
Query: 121 VFPD--SFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSES 178
PD S +F L + + G Q+H + G +T T LI MY + G
Sbjct: 80 --PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVD 137
Query: 179 ARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM--------------PVRNLTS 224
+ RVF+ + E ++V+WNA ++ R G A GVF M V+ S
Sbjct: 138 SVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCAS 197
Query: 225 WNVMLAG------------------------YTKAGELGLARRVFSEMPL-KDDVSWSTM 259
++ G Y+ G + A +V++ + + D+V +++
Sbjct: 198 LKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSL 257
Query: 260 IVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGF 319
I G N ++ +AF LL RPN L+ L+ C+ GK +H ++GF
Sbjct: 258 ISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGF 312
Query: 320 LYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
+ S + N L+D Y KCG + A+ +FR + +S+VSWTS+I A++G G +AL++F
Sbjct: 313 VSDSKLCNGLMDMYGKCGQIVQARTIFRAIP-SKSVVSWTSMIDAYAVNGDGVKALEIFR 371
Query: 380 EM--EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYG 437
EM E SGV P+ +TF+ ++ AC+H+GLV++G E F MK Y + P EHY C +D+
Sbjct: 372 EMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILS 431
Query: 438 RAARLHKAYEFICQMPISPN----AVIWRTLLGACSIHGNIELAELVKARL-AEMDPNNS 492
+A + + + +M + N IW +L ACS++ ++ E V RL E P N+
Sbjct: 432 KAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENA 491
Query: 493 GDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSM 531
+VL+SN YA GKW V +R + + +VKT G S+
Sbjct: 492 SIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 29 SLLSKCSSLK---PTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFP 85
S++ C+SLK KQ+H + VTG L + + +V + ++ A++++
Sbjct: 190 SVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGL---INEAMKVYNSLN 246
Query: 86 -NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
+ D M N+LI F+ M R P+ + +L G ++ L G
Sbjct: 247 VHTDEVMLNSLI---SGCIRNRNYKEAFLLMSRQR---PNVRVLSSSLAGCSDNSDLWIG 300
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRC 204
Q+HC A R+GF + + L+ MYG+CG AR +F +P +VV+W + + A
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVN 360
Query: 205 GDVAGARGVFGRM------PVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLK 251
GD A +F M + N ++ V+++ AG + + F M K
Sbjct: 361 GDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 164/604 (27%), Positives = 268/604 (44%), Gaps = 107/604 (17%)
Query: 29 SLLSKC---SSLKPTKQIHTHLYVTGLHTHPLFFGKL--------LLHCAVTI---SDAL 74
SLLS C + P +Q+H H +GL + KL LL A TI S+ L
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 75 HYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKG 134
H P P +N LI + +M + D F++ +K
Sbjct: 148 H---------PLP----WNVLIGSYIRNKRFQESVSVYKRMMS-KGIRADEFTYPSVIKA 193
Query: 135 VANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE------ 188
A G +H +++V LISMY G + ARR+FD M E
Sbjct: 194 CAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSW 253
Query: 189 -----------------------------PNVVTWNAAVTACFRCGDVAGARG------- 212
++VTWN C G+ GA
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRN 313
Query: 213 ---------------------------VFGRMPVRNLT-------SWNVMLAGYTKAGEL 238
VF + +R+ + N ++ Y++ +L
Sbjct: 314 CNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL 373
Query: 239 GLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC 298
A VF ++ +W+++I G A+N ++ +E+L G PN ++L +L
Sbjct: 374 RHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLF 433
Query: 299 AQAGASEFGKILHGF-MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVS 357
A+ G + GK H + + + + + N+L+D Y+K G + A+ VF +M R V+
Sbjct: 434 ARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVT 492
Query: 358 WTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
+TS+I G G GE AL F +M+ SG++PD +T +++L ACSHS LV +G +F+KM+
Sbjct: 493 YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Query: 418 NLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
+++GI +EHY CMVDLY RA L KA + +P P++ + TLL AC IHGN +
Sbjct: 553 HVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIG 612
Query: 478 ELVKAR-LAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINK 536
E + L E P + G ++LL+++YAV G W +V+++ +++ + K ++++E +
Sbjct: 613 EWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDS 672
Query: 537 VMYG 540
+ G
Sbjct: 673 ELDG 676
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 42/246 (17%)
Query: 266 NGSFDQAFGFFRELLREGIRPNEVSL---TGVLSACAQAGASEF--GKILHGFMEKSGFL 320
+G +AF F LLR +E L +LS C G +EF G+ LH SG
Sbjct: 59 HGQLYEAFRTF-SLLRYQSGSHEFVLYSSASLLSTC--VGFNEFVPGQQLHAHCISSGLE 115
Query: 321 YISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHE 380
+ S + L+ YS + AQ + N + + W +I + +E++ ++
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPL-PWNVLIGSYIRNKRFQESVSVYKR 174
Query: 381 MEESGVRPDGITFISLLYAC------SHSGLVEQGCEIFSKMKNLYGIEPTIEHY----- 429
M G+R D T+ S++ AC ++ +V E+ S NLY I Y
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 430 -------------------GCMVDLYGRAARLHKAYEFICQMPIS---PNAVIWRTLLGA 467
+++ Y +L +A++ + +M +S + V W T+ G
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 468 CSIHGN 473
C GN
Sbjct: 295 CLEAGN 300
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 164/604 (27%), Positives = 268/604 (44%), Gaps = 107/604 (17%)
Query: 29 SLLSKC---SSLKPTKQIHTHLYVTGLHTHPLFFGKL--------LLHCAVTI---SDAL 74
SLLS C + P +Q+H H +GL + KL LL A TI S+ L
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 75 HYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKG 134
H P P +N LI + +M + D F++ +K
Sbjct: 148 H---------PLP----WNVLIGSYIRNKRFQESVSVYKRMMS-KGIRADEFTYPSVIKA 193
Query: 135 VANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE------ 188
A G +H +++V LISMY G + ARR+FD M E
Sbjct: 194 CAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSW 253
Query: 189 -----------------------------PNVVTWNAAVTACFRCGDVAGARG------- 212
++VTWN C G+ GA
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRN 313
Query: 213 ---------------------------VFGRMPVRNLT-------SWNVMLAGYTKAGEL 238
VF + +R+ + N ++ Y++ +L
Sbjct: 314 CNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL 373
Query: 239 GLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC 298
A VF ++ +W+++I G A+N ++ +E+L G PN ++L +L
Sbjct: 374 RHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLF 433
Query: 299 AQAGASEFGKILHGF-MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVS 357
A+ G + GK H + + + + + N+L+D Y+K G + A+ VF +M R V+
Sbjct: 434 ARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVT 492
Query: 358 WTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
+TS+I G G GE AL F +M+ SG++PD +T +++L ACSHS LV +G +F+KM+
Sbjct: 493 YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Query: 418 NLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
+++GI +EHY CMVDLY RA L KA + +P P++ + TLL AC IHGN +
Sbjct: 553 HVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIG 612
Query: 478 ELVKAR-LAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINK 536
E + L E P + G ++LL+++YAV G W +V+++ +++ + K ++++E +
Sbjct: 613 EWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDS 672
Query: 537 VMYG 540
+ G
Sbjct: 673 ELDG 676
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 42/246 (17%)
Query: 266 NGSFDQAFGFFRELLREGIRPNEVSL---TGVLSACAQAGASEF--GKILHGFMEKSGFL 320
+G +AF F LLR +E L +LS C G +EF G+ LH SG
Sbjct: 59 HGQLYEAFRTF-SLLRYQSGSHEFVLYSSASLLSTC--VGFNEFVPGQQLHAHCISSGLE 115
Query: 321 YISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHE 380
+ S + L+ YS + AQ + N + + W +I + +E++ ++
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPL-PWNVLIGSYIRNKRFQESVSVYKR 174
Query: 381 MEESGVRPDGITFISLLYAC------SHSGLVEQGCEIFSKMKNLYGIEPTIEHY----- 429
M G+R D T+ S++ AC ++ +V E+ S NLY I Y
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 430 -------------------GCMVDLYGRAARLHKAYEFICQMPIS---PNAVIWRTLLGA 467
+++ Y +L +A++ + +M +S + V W T+ G
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 468 CSIHGN 473
C GN
Sbjct: 295 CLEAGN 300
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 238/480 (49%), Gaps = 30/480 (6%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFA-LKGVANG 138
LF+ + D +N++I + F ++ + S S A L +
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVG-------------TTLISMYGECGDSESARRVFDE 185
SL G +HC + G T F+ ++IS G + R F
Sbjct: 511 DSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQA 570
Query: 186 MPEP-----NVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSW-----NVMLAGYTKA 235
M +++T ++A G V R G + +++L N ++ Y +
Sbjct: 571 MSREGKIRHDLITLLGTISASGNLGLVLQGRCFHG-LAIKSLRELDTQLQNTLITMYGRC 629
Query: 236 GELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
++ A +VF + + SW+ +I L+ N + + F FR L E PNE++ G+L
Sbjct: 630 KDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLL 686
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI 355
SA Q G++ +G H + + GF V+ AL+D YS CG + VFRN V SI
Sbjct: 687 SASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGV-NSI 745
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEME-ESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
+W S+I+ HG GE+A++LF E+ S + P+ +FISLL ACSHSG +++G +
Sbjct: 746 SAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYK 805
Query: 415 KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNI 474
+M+ +G++P EH +VD+ GRA +L +AYEFI + A +W LL AC+ HG+
Sbjct: 806 QMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDT 865
Query: 475 ELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEI 534
+L + V L EM+P+N+ ++ L+N Y G W++ V +R+ + + ++ K PG+S+I++
Sbjct: 866 KLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 166/368 (45%), Gaps = 44/368 (11%)
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
+HC A + G + + L++ YG G+ S+ +FDE+ E +V+ WN+ +TA + G
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 207 VAGARGVFGRMP---------------------------------------VRNLTSWNV 227
A G+F M V + + N
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228
Query: 228 MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
++ Y K L A VF+ M +D VSW+T++ NG ++ +F+ + G +
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYIS--SVNNALIDTYSKCGNVAMAQLV 345
V+ + V+SAC+ G+ LHG + KSG+ + SV N++I YSKCG+ A+ V
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEE-SGVRPDGITFISLLYACSHSG 404
F + V R ++S +I+ G A +G EEA + ++M+ ++PD T +S+ C
Sbjct: 349 FEEL-VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
+G + + +E ++D+YG+ +A E + + + V W ++
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSM 466
Query: 465 LGACSIHG 472
+ A S +G
Sbjct: 467 ISAFSQNG 474
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 188/438 (42%), Gaps = 72/438 (16%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
+F H + D +NT++ F M D+ +F+ + ++
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE-ADTVTFSCVISACSSIE 303
Query: 140 SLKPGTQLHCQAFRHGF--DTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNA- 196
L G LH + G+ + HV VG ++ISMY +CGD+E+A VF+E+ +V++ NA
Sbjct: 304 ELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAI 363
Query: 197 --------------------------------AVTACFRCGDVA---GARGVFG-----R 216
V+ CGD++ R V G
Sbjct: 364 LNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRME 423
Query: 217 MPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFF 276
M R L N ++ Y K G A +F +D VSW++MI + NG +A F
Sbjct: 424 MQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLF 483
Query: 277 RELLREGIRPNEVSLT---GVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
+E++ E ++ SL+ +L++C + + FGK +H +++K
Sbjct: 484 KEVVSE-YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK----------------- 525
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG-VRPDGIT 392
G++ A L MS R + SW S+I+G A GH E+L+ F M G +R D IT
Sbjct: 526 --LGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLIT 583
Query: 393 FISLLYACSHSGLVEQG-CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQ 451
+ + A + GLV QG C +K+L ++ +++ ++ +YGR + A + +
Sbjct: 584 LLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQN--TLITMYGRCKDIESAVK-VFG 640
Query: 452 MPISPNAVIWRTLLGACS 469
+ PN W ++ A S
Sbjct: 641 LISDPNLCSWNCVISALS 658
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 154/391 (39%), Gaps = 59/391 (15%)
Query: 54 THPLFFGKLLLHCAVT-ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPF 112
+ L FGK + HC + + D LRL D +N++I F
Sbjct: 510 SDSLIFGKSV-HCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAF 568
Query: 113 IQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGE 172
M R + D + + N G + G H A + + + TLI+MYG
Sbjct: 569 QAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGR 628
Query: 173 CGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL---------- 222
C D ESA +VF + +PN+ +WN ++A + + AG R VF RNL
Sbjct: 629 CKDIESAVKVFGLISDPNLCSWNCVISALSQ--NKAG-REVF--QLFRNLKLEPNEITFV 683
Query: 223 -----------TSWNV--------------------MLAGYTKAGELGLARRVFSEMPLK 251
TS+ + ++ Y+ G L +VF +
Sbjct: 684 GLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVN 743
Query: 252 DDVSWSTMIVGLAHNGSFDQAFGFFRELLREG-IRPNEVSLTGVLSACAQAGASEFGKIL 310
+W+++I +G ++A F+EL + PN+ S +LSAC+ +G + G
Sbjct: 744 SISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSY 803
Query: 311 HGFM-EKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHG 369
+ M EK G ++ ++D + G + A + + W ++++ HG
Sbjct: 804 YKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHG 863
Query: 370 H---GEEALQLFHEMEESGVRPDGIT-FISL 396
G+E ++ EME PD + +ISL
Sbjct: 864 DTKLGKEVAEVLFEME-----PDNASYYISL 889
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 183/365 (50%), Gaps = 13/365 (3%)
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVS 357
C +A + K +HG + S S N+ L++ YS CG A VF MS +++ +
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS-EKNLET 322
Query: 358 WTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
W II A +G GE+A+ +F +E G PDG F + YAC G V++G F M
Sbjct: 323 WCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMS 382
Query: 418 NLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
YGI P+IE Y +V++Y L +A EF+ +MP+ PN +W TL+ +HGN+EL
Sbjct: 383 RDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELG 442
Query: 478 ELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKV 537
+ + +DP + + ++ + E+ +K + +
Sbjct: 443 DYCAEVVEFLDPTRLNKQ-----------SREGFIPVKASDVEKESLKKRSGILHGVKSS 491
Query: 538 MYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEK 597
M F AG+ +E LR + + + E GY + R LHDI++E KE + HSE+
Sbjct: 492 MQEFRAGDTNLPENDELFQLLRNLKMHM-VEVGYVAETRMALHDIDQESKETLLLGHSER 550
Query: 598 LAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCS 657
+A A + K ++KNLRVC DCH +K++S E+I RD RFH K+G C+
Sbjct: 551 IAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACT 610
Query: 658 CRDYW 662
C+DYW
Sbjct: 611 CKDYW 615
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 200/415 (48%), Gaps = 41/415 (9%)
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
LHC + G + V T+L+ Y CG SA R++ + ++V + V+ GD
Sbjct: 268 LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGD 327
Query: 207 VAGARGVFGRMPVRNLTSWNVMLAG----------------------------------- 231
+ A F + + V L G
Sbjct: 328 MDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNG 387
Query: 232 ----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL-LREGIRP 286
Y+K ++ +F ++ +SW+++I G +G AF F ++ L G+ P
Sbjct: 388 LITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLP 447
Query: 287 NEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVF 346
+ +++ +L+ C+Q GK LHG+ ++ F + V ALID Y+KCGN A+ VF
Sbjct: 448 DAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVF 507
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLV 406
+++ +W S+I+G ++ G AL + EM E G++PD ITF+ +L AC+H G V
Sbjct: 508 KSIK-APCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFV 566
Query: 407 EQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLG 466
++G F M +GI PT++HY MV L GRA +A I +M I P++ +W LL
Sbjct: 567 DEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLS 626
Query: 467 ACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ 521
AC IH +E+ E V ++ +D N G +VL+SN+YA W DVV +R M +
Sbjct: 627 ACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDN 681
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 198/470 (42%), Gaps = 48/470 (10%)
Query: 41 KQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXX 100
+Q+ THL +GL ++ LL+ + + A LF P DT ++N LI
Sbjct: 70 EQVQTHLTKSGLDRF-VYVKTSLLNLYLK-KGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 101 XXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHV 160
FI M + P + + L G + G +H A + G +
Sbjct: 128 RNGYECDAWKLFIVMLQQG-FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 161 FVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM--- 217
V LIS Y +C + SA +F EM + + V+WN + A + G A VF M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 218 -----PVR--NLTSWNV-----------------------MLAGYTKAGELGLARRVFSE 247
PV NL S +V ++ Y++ G L A R+++
Sbjct: 247 NVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYAS 306
Query: 248 MPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFG 307
V ++++ A G D A +F + + ++ + V+L G+L C ++ + G
Sbjct: 307 AKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIG 366
Query: 308 KILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAM 367
LHG+ KSG + V N LI YSK +V +F + ++SW S+I+G
Sbjct: 367 MSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ-ETPLISWNSVISGCVQ 425
Query: 368 HGHGEEALQLFHEMEES-GVRPDGITFISLLYACSHSGLVEQGCEI--FSKMKNLYGIEP 424
G A ++FH+M + G+ PD IT SLL CS + G E+ ++ N
Sbjct: 426 SGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN--- 482
Query: 425 TIEHYGC--MVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
E++ C ++D+Y + +A E + + +P W +++ S+ G
Sbjct: 483 --ENFVCTALIDMYAKCGNEVQA-ESVFKSIKAPCTATWNSMISGYSLSG 529
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 48/328 (14%)
Query: 123 PDSFSFAFALKGVANG-GSLKPGT-QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
P+ F+ + L+ S K Q+ + G D V+V T+L+++Y + G SA+
Sbjct: 46 PNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQ 105
Query: 181 RVFDEMPEPNVVTWNAAVTA-----------------------------------CFRCG 205
+FDEMPE + V WNA + C +CG
Sbjct: 106 MLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCG 165
Query: 206 DVAGARGVFGRMPVRNL----TSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIV 261
V+ R V G L N +++ Y+K ELG A +F EM K VSW+TMI
Sbjct: 166 FVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIG 225
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLY 321
+ +G ++A F+ + + + + V++ +LSA + LH + K G +
Sbjct: 226 AYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH------EPLHCLVVKCGMVN 279
Query: 322 ISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
SV +L+ YS+CG + A+ ++ + + SIV TSI++ A G + A+ F +
Sbjct: 280 DISVVTSLVCAYSRCGCLVSAERLYAS-AKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQG 409
+ ++ D + + +L+ C S ++ G
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIG 366
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 103/284 (36%), Gaps = 64/284 (22%)
Query: 33 KCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMY 92
K S + +H + +GL T L L+ + D + L LF+ +
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLIT--MYSKFDDVETVLFLFEQLQETPLISW 416
Query: 93 NTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAF 152
N++I F QM + PD+ + A L G + L G +LH
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 153 RHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARG 212
R+ F+ FV T LI MY +CG+ A VF + P TWN+
Sbjct: 477 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNS---------------- 520
Query: 213 VFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQA 272
M++GY+ + GL H +A
Sbjct: 521 ---------------MISGYS--------------------------LSGLQH-----RA 534
Query: 273 FGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEK 316
+ E+ +G++P+E++ GVLSAC G + GKI M K
Sbjct: 535 LSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 578
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 14/237 (5%)
Query: 243 RVFSEMPLKDDVSW-STMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQA 301
R+ + L D+S+ +++ H FR+LLR + PN +++ L QA
Sbjct: 2 RITKPITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFL----QA 57
Query: 302 GASEFGKI------LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI 355
+ F + + KSG V +L++ Y K G V AQ++F M R
Sbjct: 58 TTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMP-ERDT 116
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
V W ++I G + +G+ +A +LF M + G P T ++LL C G V QG +
Sbjct: 117 VVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGV 176
Query: 416 MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
G+E + ++ Y + A L A +M + V W T++GA S G
Sbjct: 177 AAK-SGLELDSQVKNALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGAYSQSG 231
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 217/458 (47%), Gaps = 42/458 (9%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALK 133
L A +LF + + D ++ +I F M R + P++ + L+
Sbjct: 351 LEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR-IHIKPNAVTLTSVLQ 409
Query: 134 GVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVT 193
G A + + G +HC A + ++ + T +ISMY +CG A + F+ +P + V
Sbjct: 410 GCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA 469
Query: 194 WNA-----------------------------------AVTACFRCGDVAGARGVFGRMP 218
+NA + C C D A V+G++
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII 529
Query: 219 VRNLTS----WNVMLAGYTKAGELGLARRVFSEMPL-KDDVSWSTMIVGLAHNGSFDQAF 273
S + ++ +TK L A +F + K VSW+ M+ G +G ++A
Sbjct: 530 KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAV 589
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
FR++ E +PN V+ ++ A A+ A G +H + + GF + V N+L+D Y
Sbjct: 590 ATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMY 649
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
+KCG + ++ F +S + IVSW ++++ A HG A+ LF M+E+ ++PD ++F
Sbjct: 650 AKCGMIESSEKCFIEIS-NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSF 708
Query: 394 ISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP 453
+S+L AC H+GLVE+G IF +M + IE +EHY CMVDL G+A +A E + +M
Sbjct: 709 LSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMR 768
Query: 454 ISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNN 491
+ + +W LL + +H N+ L+ +L +++P N
Sbjct: 769 VKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLN 806
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 208/472 (44%), Gaps = 46/472 (9%)
Query: 30 LLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDT 89
+L +C + + Q+H L V+GL H A ++ + +F +P
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGLKPHNQLIN------AYSLFQRQDLSRVIFDSVRDPGV 64
Query: 90 FMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHC 149
++N++IR F M + PD +SF FALK A K G ++H
Sbjct: 65 VLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHD 124
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAG 209
G ++ V++GT L+ MY + D SAR+VFD+M +VVTWN V+ + G +
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 210 ARGVFGRM-----PVRNLTSWNV--------------------------------MLAGY 232
A +F M + +++ +N+ ++ Y
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMY 244
Query: 233 TKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLT 292
+L A VF E+ KD+ SW TM+ AHNG F++ F + +R N+V+
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304
Query: 293 GVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVG 352
L A A G G +H + + G + SV +L+ YSKCG + +A+ +F N+
Sbjct: 305 SALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE-D 363
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEI 412
R +VSW+++IA G +EA+ LF +M ++P+ +T S+L C+ G I
Sbjct: 364 RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI 423
Query: 413 FSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
IE +E ++ +Y + R A + ++PI +AV + L
Sbjct: 424 HCYAIKA-DIESELETATAVISMYAKCGRFSPALKAFERLPI-KDAVAFNAL 473
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 199/502 (39%), Gaps = 62/502 (12%)
Query: 37 LKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLI 96
K +IH + GL + ++ G L+ D L A ++F D +NT++
Sbjct: 116 FKKGLRIHDLIAEMGLES-DVYIGTALVEMYCKARD-LVSARQVFDKMHVKDVVTWNTMV 173
Query: 97 RXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGF 156
F MR V D S + V+ LH + GF
Sbjct: 174 SGLAQNGCSSAALLLFHDMRS-CCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Query: 157 DTHVFVGTT-LISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCG---------- 205
+F ++ LI MY C D +A VF+E+ + +W + A G
Sbjct: 233 ---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289
Query: 206 ----------------------------------DVAGARGVFGRMPVRNLTSWNVMLAG 231
D A +G+ G + V +++
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVAT-----SLMSM 344
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y+K GEL +A ++F + +D VSWS MI G D+A FR+++R I+PN V+L
Sbjct: 345 YSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTL 404
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
T VL CA AS GK +H + K+ A+I Y+KCG + A F + +
Sbjct: 405 TSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPI 464
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
+ V++ ++ G G +A ++ M+ GV PD T + +L C+ +G
Sbjct: 465 -KDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSC 523
Query: 412 IFSK-MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSI 470
++ + +K+ + E + H +++++ + L A + + V W ++ +
Sbjct: 524 VYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLL 581
Query: 471 HGNIE--LAELVKARLAEMDPN 490
HG E +A + ++ + PN
Sbjct: 582 HGQAEEAVATFRQMKVEKFQPN 603
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 157/364 (43%), Gaps = 53/364 (14%)
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCG 205
Q+H G H LI+ Y + +R +FD + +P VV WN+ + R G
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 206 DVAGARGVFGRMP------------------------------VRNLTS----------W 225
A G FG M + +L +
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
++ Y KA +L AR+VF +M +KD V+W+TM+ GLA NG A F ++ +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
+ VSL ++ A ++ S+ + LHG + K GF++ + ++ LID Y C ++ A+ V
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESV 256
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
F + + SW +++A A +G EE L+LF M VR + + S L A ++ G
Sbjct: 257 FEEVW-RKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 406 VEQGCEI--FSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRT 463
+ +G I ++ + L G + ++ +Y + L A + + + V W
Sbjct: 316 LVKGIAIHDYAVQQGLIG---DVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSWSA 371
Query: 464 LLGA 467
++ +
Sbjct: 372 MIAS 375
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 193/400 (48%), Gaps = 18/400 (4%)
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
+ G +A + EG + L + C A A + K++H F+ S +
Sbjct: 156 ICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISD 215
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
S N++I+ YS CG+V A VF +M R++ +W +I A +G GE+A+ F +
Sbjct: 216 ISAYNSIIEMYSGCGSVEDALTVFNSMPE-RNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
+ G +PDG F + +AC G + +G F M YGI P +EHY +V + L
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYL 334
Query: 443 HKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVY 502
+A F+ M PN +W TL+ +HG++ L + + + ++D + S
Sbjct: 335 DEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKE---SKAG 389
Query: 503 AVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDKLREIM 562
V K D+V + Q M K P + + + M N A L+E M
Sbjct: 390 LVPVKSSDLVKEKL----QRMAKGPNYGI----RYMAAGDISRPENRELYMALKSLKEHM 441
Query: 563 LRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVC 622
+ E GY P + LHD+++E K++++ H+E+ A P +R++KNLRVC
Sbjct: 442 I----EIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVC 497
Query: 623 GDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
DCH +KL+SK E+I RD RFH KDG+CSCR+YW
Sbjct: 498 ADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 166/301 (55%), Gaps = 2/301 (0%)
Query: 232 YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
Y G+L AR++F +MP++D V ++ M G G FRE+ G + V +
Sbjct: 179 YVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVM 238
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV 351
+L AC Q GA + GK +HG+ + ++ NA+ D Y KC + A VF NMS
Sbjct: 239 VSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS- 297
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
R ++SW+S+I G + G + +LF EM + G+ P+ +TF+ +L AC+H GLVE+
Sbjct: 298 RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWL 357
Query: 412 IFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIH 471
F M+ Y I P ++HY + D RA L +A +F+ MP+ P+ + +L C ++
Sbjct: 358 YFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVY 416
Query: 472 GNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSM 531
GN+E+ E V L ++ P + +V L+ +Y+ AG++ + S+R+ M E+ + K PG S
Sbjct: 417 GNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSS 476
Query: 532 I 532
I
Sbjct: 477 I 477
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 167/396 (42%), Gaps = 40/396 (10%)
Query: 25 PRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHF 84
P SLL + K + +H HL T L+++ + KL+L + ++ +L +F H
Sbjct: 35 PDLFSLLHHSPNAKHLRHLHAHLLRTFLYSNVVLSSKLVLAYS-KLNHLFPTSLSVFWHM 93
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
P + F +N +I F++M R V PD F+ L+ + K G
Sbjct: 94 PYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSG 153
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAA------- 197
+H + GF + +FV + L+ MY + G AR++FD+MP + V + A
Sbjct: 154 DLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQ 213
Query: 198 ----------------------------VTACFRCGDVAGARGVFG----RMPVRNLTSW 225
+ AC + G + + V G R L
Sbjct: 214 GEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLG 273
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N + Y K L A VF M +D +SWS++I+G +G +F F E+L+EGI
Sbjct: 274 NAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIE 333
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
PN V+ GVLSACA G E + M++ + ++ D S+ G + A+
Sbjct: 334 PNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKF 393
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM 381
+M V ++++G ++G+ E ++ E+
Sbjct: 394 LEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVAREL 429
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 22/258 (8%)
Query: 244 VFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREG-IRPNEVSLTGVLSACAQAG 302
VF MP ++ SW+ +I + +G ++ F + RE +RP++ +L +L AC+ +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 303 ASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSII 362
++ G ++H K GF V++AL+ Y G + A+ +F +M V R V +T++
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPV-RDSVLYTAMF 207
Query: 363 AGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGI 422
G G L +F EM SG D + +SLL AC G ++ G K+++G
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG-------KSVHGW 260
Query: 423 EPTIEHYGCM--------VDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNI 474
I C+ D+Y + + L A+ M + + W +L+ + G++
Sbjct: 261 --CIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS-RRDVISWSSLILGYGLDGDV 317
Query: 475 ELA-ELVKARLAE-MDPN 490
++ +L L E ++PN
Sbjct: 318 VMSFKLFDEMLKEGIEPN 335
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/555 (24%), Positives = 249/555 (44%), Gaps = 52/555 (9%)
Query: 29 SLLSKCSS---LKPTKQIHTHLYVTGLHTHPLFFGKLL-LHCAVTISDALHYALRLFQHF 84
S+LS CS + Q+H + G + L+ L+ + + D AL+LF
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV---ALKLFDEM 173
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
+ + + N L+R +++M V + ++ + ++G ++ + G
Sbjct: 174 LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEG-VAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 145 TQLHCQAFRHGFD-THVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
QLH + G++ +++FV L+ Y CGD + R F+ +PE +V++WN+ V+ C
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 204 CGDVAGARGVFGRM----------------------------------------PVRNLT 223
G V + +F +M V +L
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 224 SWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREG 283
+ ++ Y K + + ++ +P + ++++ L H G F ++ EG
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEG 412
Query: 284 IRPNEVSLTGVLSACAQAGASEF--GKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAM 341
+EV+L+ VL A + + ++H KSG+ +V+ +LID Y+K G +
Sbjct: 413 TGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEV 472
Query: 342 AQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
++ VF + +I TSII G A +G G + +++ EM+ + PD +T +S+L CS
Sbjct: 473 SRKVFDELDTP-NIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCS 531
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIW 461
HSGLVE+G IF +++ YGI P + Y CMVDL GRA + KA + Q + V W
Sbjct: 532 HSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAW 591
Query: 462 RTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ 521
+LL +C IH N + L ++P N ++ +S Y G ++ IR +
Sbjct: 592 SSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASR 651
Query: 522 SMVKTPGWSMIEINK 536
+++ G+S + +
Sbjct: 652 ELMREIGYSSVVVKN 666
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 112/248 (45%), Gaps = 16/248 (6%)
Query: 234 KAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTG 293
K+G L A F EM ++D V+++ +I G + G +A + E++ G+R + +
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 294 VLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGR 353
VLS C+ G +H + GF V +AL+ Y+ V +A +F M + R
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM-LDR 176
Query: 354 SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIF 413
++ ++ G + +++ ME GV +G+T+ ++ CSH LV +G ++
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 414 S-------KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLG 466
S + N++ +++Y DL G + E + + W +++
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE--------KDVISWNSIVS 288
Query: 467 ACSIHGNI 474
C+ +G++
Sbjct: 289 VCADYGSV 296
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 116/283 (40%), Gaps = 16/283 (5%)
Query: 27 WVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPN 86
+++ S+ S ++ KQIH ++ G L L+ + + AL L+Q P
Sbjct: 321 FLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL-LYQSLPC 379
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG--GSLKPG 144
+ N+L+ F M T D + + LK ++ SL
Sbjct: 380 LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI-DEVTLSTVLKALSLSLPESLHSC 438
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRC 204
T +HC A + G+ V V +LI Y + G +E +R+VFDE+ PN+ + + R
Sbjct: 439 TLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARN 498
Query: 205 GDVAGARGVFGRMPVRNLTSWNV----MLAGYTKAGELGLARRVFSEMPLKDDVS----- 255
G + M NL V +L+G + +G + +F + K +S
Sbjct: 499 GMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKL 558
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC 298
++ M+ L G ++A R LL+ + V+ + +L +C
Sbjct: 559 YACMVDLLGRAGLVEKA---ERLLLQARGDADCVAWSSLLQSC 598
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 327 NALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGV 386
N ID K GN+ A F MSV R +V++ +I+G + +G A++L+ EM G+
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSV-RDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGL 108
Query: 387 RPDGITFISLLYACSHSGLVEQGCEIFSKMKNL 419
R TF S+L CS +G ++ ++ +L
Sbjct: 109 RESASTFPSVLSVCSDELFCREGIQVHCRVISL 141
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 203/479 (42%), Gaps = 74/479 (15%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A R+F NP +N ++R F +M V P + + + + +
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML-ELNVRPLNHTVSSVMLACS 274
Query: 137 NGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDE----------- 185
+L+ G +H A + V T++ MY +C ESARRVFD+
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTS 334
Query: 186 --------------------MPEPNVVTWNAAV--------------------------- 198
MPE N+V+WNA +
Sbjct: 335 AMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 199 --------TACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFS 246
C DV + G + N+ N +L Y K G L A F
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFR 454
Query: 247 EMP-LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASE 305
+M L+D+VSW+ ++ G+A G +QA FF + E +P++ +L +L+ CA A
Sbjct: 455 QMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALN 513
Query: 306 FGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGL 365
GK +HGF+ + G+ + A++D YSKC A VF+ + R ++ W SII G
Sbjct: 514 LGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAAT-RDLILWNSIIRGC 572
Query: 366 AMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPT 425
+G +E +LF +E GV+PD +TF+ +L AC G VE G + FS M Y I P
Sbjct: 573 CRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQ 632
Query: 426 IEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARL 484
+EHY CM++LY + LH+ EF+ MP P + + AC + +L RL
Sbjct: 633 VEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 214/517 (41%), Gaps = 81/517 (15%)
Query: 30 LLSKCSS---LKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPN 86
L CSS + +++ +HL VT P+F + A + A LF+ P
Sbjct: 67 LFRSCSSKALVVQARKVQSHL-VTFSPLPPIFLLNRAIE-AYGKCGCVDDARELFEEMPE 124
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
D +N +I F +M R ++ SFA LK L+ Q
Sbjct: 125 RDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATET-SFAGVLKSCGLILDLRLLRQ 183
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
LHC ++G+ +V + T+++ +YG+C ARRVFDE+ P+ V+WN V G
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 207 VAGARGVFGRMPVRNLTSWN-----VMLAG------------------------------ 231
A +F +M N+ N VMLA
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 232 ----YTKAGELGLARRVFSE-------------------------------MPLKDDVSW 256
Y K L ARRVF + MP ++ VSW
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 257 STMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEK 316
+ M+ G H +D+A F + +E + V+L +L+ C+ + GK HGF+ +
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 317 SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQ 376
G+ V NAL+D Y KCG + A + FR MS R VSW +++ G+A G E+AL
Sbjct: 424 HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALS 483
Query: 377 LFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS-KMKNLYGIEPTIEHYGCMVDL 435
F M+ +P T +LL C++ + G I +++ Y I+ I G MVD+
Sbjct: 484 FFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR--GAMVDM 540
Query: 436 YGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
Y + A E + + + + ++W +++ C +G
Sbjct: 541 YSKCRCFDYAIE-VFKEAATRDLILWNSIIRGCCRNG 576
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 162/388 (41%), Gaps = 72/388 (18%)
Query: 160 VFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRM-- 217
+F+ I YG+CG + AR +F+EMPE + +WNA +TAC + G +F RM
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 218 ---------------------PVRNLTSWNVMLAGYTKAGELGL---------------- 240
+R L + + Y +G + L
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 241 ARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQ 300
ARRVF E+ DVSW+ ++ G D+A F ++L +RP +++ V+ AC++
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 301 AGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTS 360
+ A E GK++H K + + V+ ++ D Y KC + A+ VF + + + + SWTS
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF-DQTRSKDLKSWTS 334
Query: 361 IIAGLAMHGHGEEALQLFHEMEESGV-------------------------------RPD 389
++G AM G EA +LF M E + D
Sbjct: 335 AMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 390 GITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFI 449
+T + +L CS V+ G + + +G + + ++D+YG+ L A +
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYR-HGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 450 CQMPISPNAVIWRTLLGACSIHGNIELA 477
QM + V W LL + G E A
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQA 481
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 128/280 (45%), Gaps = 9/280 (3%)
Query: 172 ECGDSESARRVFDEMPEPNVVTW--NAAVTACFRCGDVAGARGVFGRM----PVRNLTSW 225
E G+ A V PEP V W +C V AR V + P+ +
Sbjct: 41 EGGNVSKAVSVLFASPEP-VSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLL 99
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N + Y K G + AR +F EMP +D SW+ +I A NG D+ F FR + R+G+R
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
E S GVL +C + LH + K G+ + +++D Y KC ++ A+ V
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
F + V S VSW I+ G +EA+ +F +M E VRP T S++ ACS S
Sbjct: 220 FDEI-VNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 406 VEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKA 445
+E G I + L + T+ + D+Y + RL A
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTS-VFDMYVKCDRLESA 317
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 215/488 (44%), Gaps = 42/488 (8%)
Query: 19 MSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYAL 78
MS L ++ S+ + QIH L V ++ ++ C + +Y
Sbjct: 1 MSRELTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTR 60
Query: 79 RLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANG 138
+F P+ F+ N++ + + Q R + PD+FSF +K
Sbjct: 61 LIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQ-RSRCGIMPDAFSFPVVIKSAGRF 119
Query: 139 GSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAV 198
G L + GF +V ++ MY + ESAR+VFD++ + WN +
Sbjct: 120 GIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 199 TACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWST 258
+ ++ G+ A +F MP ++ SW VM+ G+ K +L AR+ F MP K VSW+
Sbjct: 175 SGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNA 234
Query: 259 MIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG 318
M+ G A NG + A F ++LR G+RPNE + V+SAC+ + L +++
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 319 FLYISSVNNALIDTYSKCGNVAMAQLVF------RNMSV--------------------- 351
V AL+D ++KC ++ A+ +F RN+
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 352 ----GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESG-VRPDGITFISLLYACSHSGLV 406
R++VSW S+IAG A +G A++ F +M + G +PD +T IS+L AC H +
Sbjct: 355 DTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 407 EQG-CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL 465
E G C + KN I+ Y ++ +Y R L +A +M + V + TL
Sbjct: 415 ELGDCIVDYIRKN--QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLF 471
Query: 466 GACSIHGN 473
A + +G+
Sbjct: 472 TAFAANGD 479
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 160/310 (51%), Gaps = 47/310 (15%)
Query: 164 TTLISMYGECGDSESARRVFDEM----PEPNVVTWNAAVTAC-FR--------------- 203
++S Y + G +E A R+F++M PN TW ++AC FR
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 204 -------------------CGDVAGARGVFGRMPV-RNLTSWNVMLAGYTKAGELGLARR 243
C D+ AR +F + RNL +WN M++GYT+ G++ AR+
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 244 VFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREG-IRPNEVSLTGVLSACAQAG 302
+F MP ++ VSW+++I G AHNG A FF +++ G +P+EV++ VLSAC
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 303 ASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSII 362
E G + ++ K+ S +LI Y++ GN+ A+ VF M R +VS+ ++
Sbjct: 413 DLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLF 471
Query: 363 AGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGI 422
A +G G E L L +M++ G+ PD +T+ S+L AC+ +GL+++G IF ++N
Sbjct: 472 TAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN---- 527
Query: 423 EPTIEHYGCM 432
P +HY CM
Sbjct: 528 -PLADHYACM 536
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 236/513 (46%), Gaps = 47/513 (9%)
Query: 74 LHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALK 133
L+ AL LF P D +NT+I F M+R + P F+F+
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWE-IRPTEFTFSILAS 144
Query: 134 GVANGGSLKPGTQLHCQAFRHGFDTH-VFVGTTLISMYGECGDSESARRVFDEMPEPNVV 192
V ++ G Q+H A G + + V +++ MY G + A VF M + +VV
Sbjct: 145 LVT---CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVV 201
Query: 193 TWNAAVTACFRCGDVAGARGVFGRM--------------------PVRNLTSWNVMLA-- 230
+WN + +C G+ A F M +R L+ LA
Sbjct: 202 SWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALC 261
Query: 231 -----------------GYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAF 273
++K L + ++F E+ D V ++MI + + + A
Sbjct: 262 IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDAL 321
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
F + + +RP++ + + VLS+ A + G +H + K GF ++V +L++ Y
Sbjct: 322 RLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMY 380
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHE-MEESGVRPDGIT 392
K G+V +A VF G+ ++ W ++I GLA + E+L +F++ + ++PD +T
Sbjct: 381 FKTGSVDLAMGVFAKTD-GKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVT 439
Query: 393 FISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM 452
+ +L AC ++G V +G +IFS M+ +G+ P EHY C+++L R +++A + ++
Sbjct: 440 LMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKI 499
Query: 453 PISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVV 512
P P++ IW +L A G+ LAE V + E +P +S +++L +Y + +W++ V
Sbjct: 500 PFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSV 559
Query: 513 SIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGE 545
+R M E + G S I I ++ F A +
Sbjct: 560 KLRYAMNEHKLKSAQGSSKISIESSVFSFEADQ 592
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 145/315 (46%), Gaps = 13/315 (4%)
Query: 195 NAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV 254
N + F+ G V A +F +P +N +WNV L G K G L A +F EMP +D V
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVV 102
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNE--VSLTGVLSACAQAGASEFGKILHG 312
SW+TMI GL G + F ++ R IRP E S+ L C + G +HG
Sbjct: 103 SWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQ-----IHG 157
Query: 313 FMEKSGF-LYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHG 371
SG Y V N+++D Y + G A VF M R +VSW +I + G+
Sbjct: 158 NAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME-DRDVVSWNCLILSCSDSGNK 216
Query: 372 EEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGC 431
E AL F M E ++PD T ++ CS + +G + + + + +I G
Sbjct: 217 EVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV-LGA 275
Query: 432 MVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIH--GNIELAELVKARLAEMDP 489
+D++ + RL + + ++ ++V+ +++G+ S H G L + A + P
Sbjct: 276 GIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRP 334
Query: 490 NNSGDHVLLSNVYAV 504
+ +LS++ AV
Sbjct: 335 DKFTFSSVLSSMNAV 349
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 183/443 (41%), Gaps = 54/443 (12%)
Query: 29 SLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFPNPD 88
SLLSK +L K +H L G ++G L S ++ AL+LF P+ +
Sbjct: 14 SLLSKSPTL--AKIVHAQLLEAGF-VRTTYWGNRCLQLYFK-SGSVINALQLFDDIPDKN 69
Query: 89 TFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLH 148
T +N LKG+ G L L
Sbjct: 70 TITWNV------------------------------------CLKGLFKNGYLNNALDL- 92
Query: 149 CQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWN--AAVTACF 202
F + V T+IS CG E RVF +M P T++ A++ C
Sbjct: 93 ---FDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCV 149
Query: 203 RCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
R G+ + + NL WN ++ Y + G A VF M +D VSW+ +I+
Sbjct: 150 RHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILS 209
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
+ +G+ + A F + I+P+E +++ V+S C+ GK K GFL
Sbjct: 210 CSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSN 269
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
S V A ID +SKC + + +FR + S++ S+I + H GE+AL+LF
Sbjct: 270 SIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC-NSMIGSYSWHCCGEDALRLFILAM 328
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
VRPD TF S+L + ++ +++ G ++ S + L G + ++++Y + +
Sbjct: 329 TQSVRPDKFTFSSVL-SSMNAVMLDHGADVHSLVIKL-GFDLDTAVATSLMEMYFKTGSV 386
Query: 443 HKAYEFICQMPISPNAVIWRTLL 465
A + + + W T++
Sbjct: 387 DLAMGVFAKTD-GKDLIFWNTVI 408
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 42/240 (17%)
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
P+ + + +++ + + KI+H + ++GF+ + N + Y K G+V A +
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 346 FRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
F ++ ++ ++W + GL +G+ AL LF EM E V T IS L +C G
Sbjct: 62 FDDIP-DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWN-TMISGLVSC---GF 116
Query: 406 VEQGCEIFSKMKNLYGIEPT-------------IEH--------------------YGCM 432
E G +F M+ + I PT + H + +
Sbjct: 117 HEYGIRVFFDMQR-WEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSV 175
Query: 433 VDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA--ELVKARLAEMDPN 490
+D+Y R A M + V W L+ +CS GN E+A + R E+ P+
Sbjct: 176 MDMYRRLGVFDYALSVFLTME-DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 176/348 (50%), Gaps = 37/348 (10%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P ++F+ ALK + QLH R G++ + +V ++L+ Y + A +
Sbjct: 414 PTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLL 469
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLAR 242
D P V +P+ N++ Y++ G+ +
Sbjct: 470 LDWASGPTSV------------------------VPL------NIVAGIYSRRGQYHESV 499
Query: 243 RVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG 302
++ S + D VSW+ I + + ++ F+ +L+ IRP++ + +LS C++
Sbjct: 500 KLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLC 559
Query: 303 ASEFGKILHGFMEKSGFLYISS-VNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSI 361
G +HG + K+ F + V N LID Y KCG++ VF + +++++WT++
Sbjct: 560 DLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEE-TREKNLITWTAL 618
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYG 421
I+ L +HG+G+EAL+ F E G +PD ++FIS+L AC H G+V++G +F KMK+ YG
Sbjct: 619 ISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YG 677
Query: 422 IEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACS 469
+EP ++HY C VDL R L +A I +MP +A +WRT L C+
Sbjct: 678 VEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 155/348 (44%), Gaps = 49/348 (14%)
Query: 160 VFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVF----- 214
V+V +IS+Y + G+ A +VFD+MPE N V++N + + GDV A GVF
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 215 -GRMPVRNLTSW--------------------------------NVMLAGYTKAGELGLA 241
G +P ++ S +L Y + L +A
Sbjct: 109 FGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMA 168
Query: 242 RRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQA 301
+VF +MP K +W+ M+ L H G + FFREL+R G E S GVL +
Sbjct: 169 EQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCV 228
Query: 302 GASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSI 361
+ K LH K G SV N+LI Y KCGN MA+ +F++ IVSW +I
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAG-SWDIVSWNAI 287
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM-KNLY 420
I A + +AL+LF M E G P+ T++S+L S L+ G +I + KN
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-- 345
Query: 421 GIEPTIEHYGCMVDLYGRAARLHKA---YEFICQMPISPNAVIWRTLL 465
G E I ++D Y + L + +++I N V W LL
Sbjct: 346 GCETGIVLGNALIDFYAKCGNLEDSRLCFDYI----RDKNIVCWNALL 389
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/544 (23%), Positives = 210/544 (38%), Gaps = 98/544 (18%)
Query: 4 MSYFIPTPSSGTEEAMSNTLEPRWVSLLSKCSSL--KPTKQIHTHLYVTGLHTHPLFFGK 61
M YF P+ T VS L C+SL + Q+H GL F G
Sbjct: 106 MRYFGYLPNQST------------VSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGT 153
Query: 62 LLLHCAVTISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTV 121
LL C D L A ++F+ P +N ++ F ++ R
Sbjct: 154 CLL-CLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS 212
Query: 122 FPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARR 181
+S SF LKGV+ L QLHC A + G D + V +LIS YG+CG++ A R
Sbjct: 213 LTES-SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAER 271
Query: 182 VFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP----------------------- 218
+F + ++V+WNA + A + + A +F MP
Sbjct: 272 MFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQL 331
Query: 219 -----------VRN-----LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
++N + N ++ Y K G L +R F + K+ V W+ ++ G
Sbjct: 332 LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
A N F ++L+ G RP E + + L +C + LH + + G+
Sbjct: 392 YA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQ----LHSVIVRMGYEDN 446
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI--------------------------- 355
V ++L+ +Y+K + A L+ S S+
Sbjct: 447 DYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE 506
Query: 356 ----VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
VSW IA + + EE ++LF M +S +RPD TF+S+L CS + G
Sbjct: 507 QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSS 566
Query: 412 IFSKM-KNLYGIEPTIEHYGC--MVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGAC 468
I + K + T + C ++D+YG+ + + + + N + W L+
Sbjct: 567 IHGLITKTDFSCADT---FVCNVLIDMYGKCGSIRSVMK-VFEETREKNLITWTALISCL 622
Query: 469 SIHG 472
IHG
Sbjct: 623 GIHG 626
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIR 285
N +++ Y K GE+ LA +VF +MP ++ VS++T+I G + G D+A+G F E+ G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSG-FLYISSVNNALIDTYSKCGNVAMAQL 344
PN+ +++G+LS CA G LHG K G F+ + V L+ Y + + MA+
Sbjct: 113 PNQSTVSGLLS-CASLDVRA-GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
VF +M +S+ +W +++ L G +E + F E+ G +F+ +L S
Sbjct: 171 VFEDMPF-KSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVK 229
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTL 464
++ ++ G++ I ++ YG+ H A E + Q S + V W +
Sbjct: 230 DLDISKQLHCSATK-KGLDCEISVVNSLISAYGKCGNTHMA-ERMFQDAGSWDIVSWNAI 287
Query: 465 LGA 467
+ A
Sbjct: 288 ICA 290
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 190/432 (43%), Gaps = 55/432 (12%)
Query: 22 TLEPRWVSLLSKCS---SLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDA----L 74
T E +V LL+ CS + +Q+H ++ G+ G L++ ++ A L
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-------GNLIVESSLVYFYAQCGEL 234
Query: 75 HYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKG 134
ALR F D + +I FI M H P+ F+ LK
Sbjct: 235 TSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH-WFLPNEFTVCSILKA 293
Query: 135 VANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTW 194
+ +L+ G Q+H + T VFVGT+L+ MY +CG+ R+VFD M N VTW
Sbjct: 294 CSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTW 353
Query: 195 NAAVTACFRCGDVAGARGVFGRMPVRNLTSWNVMLAG----------------------- 231
+ + A R G A +F M R+L + N+ +
Sbjct: 354 TSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK 413
Query: 232 ----------------YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGF 275
Y K GE A V ++P +D VSW+ MI G + G +A F
Sbjct: 414 NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDF 473
Query: 276 FRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSK 335
+E+++EG+ PN + + L ACA + + G+ +H +K+ L V +ALI Y+K
Sbjct: 474 LKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAK 533
Query: 336 CGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFIS 395
CG V+ A VF +M +++VSW ++I G A +G EAL+L + ME G D F +
Sbjct: 534 CGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFAT 592
Query: 396 LLYACSHSGLVE 407
+L C L E
Sbjct: 593 ILSTCGDIELDE 604
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 212/494 (42%), Gaps = 48/494 (9%)
Query: 11 PSSGTEEAMSNTLEPRWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTI 70
SS E + L W L + ++ K+IH + + ++FG L+ V +
Sbjct: 75 SSSFDSERVDYALLAEW---LQSSNGMRLIKRIHA-MALKCFDDQVIYFGNNLISSCVRL 130
Query: 71 SDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAF 130
D L YA ++F P +T + +I F +H F + F
Sbjct: 131 GD-LVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVC 189
Query: 131 ALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPN 190
L + + G Q+H + G ++ V ++L+ Y +CG+ SA R FD M E +
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 191 VVTWNAAVTACFRCGDVAGARGVF------------------------------GR---- 216
V++W A ++AC R G A G+F GR
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 217 MPVRNLTSWNV-----MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQ 271
+ V+ + +V ++ Y K GE+ R+VF M ++ V+W+++I A G ++
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 272 AFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALID 331
A FR + R + N +++ +L AC GA GK LH + K+ + + L+
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 332 TYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGI 391
Y KCG A V + + R +VSWT++I+G + GH EAL EM + GV P+
Sbjct: 429 LYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPF 487
Query: 392 TFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQ 451
T+ S L AC++S + G I S K + + ++ +Y + + +A+
Sbjct: 488 TYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKCGFVSEAFRVFDS 546
Query: 452 MPISPNAVIWRTLL 465
MP N V W+ ++
Sbjct: 547 MP-EKNLVSWKAMI 559
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 185/405 (45%), Gaps = 46/405 (11%)
Query: 128 FAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP 187
+A + + + ++ ++H A + D ++ G LIS GD AR+VFD MP
Sbjct: 85 YALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMP 144
Query: 188 EPNVVTWNAAVTA------------------------------------CFRCGDVAGAR 211
E N VTW A + C R + R
Sbjct: 145 EKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGR 204
Query: 212 GVFGRMP---VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGS 268
V G M V NL + ++ Y + GEL A R F M KD +SW+ +I + G
Sbjct: 205 QVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGH 264
Query: 269 FDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNA 328
+A G F +L PNE ++ +L AC++ A FG+ +H + K V +
Sbjct: 265 GIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTS 324
Query: 329 LIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRP 388
L+D Y+KCG ++ + VF MS R+ V+WTSIIA A G GEEA+ LF M+ +
Sbjct: 325 LMDMYAKCGEISDCRKVFDGMS-NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIA 383
Query: 389 DGITFISLLYACSHSGLVEQGCEIFSK-MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYE 447
+ +T +S+L AC G + G E+ ++ +KN IE + +V LY + A+
Sbjct: 384 NNLTVVSILRACGSVGALLLGKELHAQIIKN--SIEKNVYIGSTLVWLYCKCGESRDAFN 441
Query: 448 FICQMPISPNAVIWRTLLGACSIHGN-IELAELVKARLAE-MDPN 490
+ Q+P S + V W ++ CS G+ E + +K + E ++PN
Sbjct: 442 VLQQLP-SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPN 485
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 186/408 (45%), Gaps = 34/408 (8%)
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
L G++ +A L +G + + L G+ C + A E +++H +
Sbjct: 94 LCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCD 153
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAM-----HGHGEEALQL 377
NA+I+ YS C +V A VF M W S + M +G+GEEA+ L
Sbjct: 154 VGARNAIIEMYSGCCSVDDALKVFEEMP------EWNSGTLCVMMRCFVNNGYGEEAIDL 207
Query: 378 FHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYG 437
F +E G +P+G F + C+ +G V++G F M YGI P++EHY + +
Sbjct: 208 FTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLA 267
Query: 438 RAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVL 497
+ L +A F+ +MP+ P+ +W TL+ +HG++EL + + ++D
Sbjct: 268 TSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDK--- 324
Query: 498 LSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDK 557
+S+ VA K D V E S P F + +P + + +
Sbjct: 325 VSSAGLVATKASDFVK-----KEPSTRSEP------------YFYSTFRPVDSSHPQMNI 367
Query: 558 LREIMLRLRA---EAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGKQLR 614
+ E ++ LR+ E GY P R I E ++ + + E++A + K +
Sbjct: 368 IYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAIT 427
Query: 615 IVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDYW 662
++ N+R+ GDCH +MKL+S ++I RD +HLFK+G+C C + W
Sbjct: 428 LLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 45/341 (13%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
++ +F+ L+ SL G Q+H +G +++ F+ T L+ MY CG + A++VF
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 184 DEMPEPNVVTWNA-----AVTACFRCGDV--------------------------AGARG 212
DE NV +WNA ++ R DV AGA
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229
Query: 213 VFGRMPVRNLTSWNVMLAG----------YTKAGELGLARRVFSEMPLKDDVSWSTMIVG 262
+ + L N + Y K G++GLARRVF E+ +D V W MI G
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG 289
Query: 263 LAHNGSFDQAFGFFRELL-REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS-GFL 320
LAHN +A G FR ++ E I PN V LT +L A + GK +H + KS ++
Sbjct: 290 LAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYV 349
Query: 321 YISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHE 380
V++ LID Y KCG++A + VF S R+ +SWT++++G A +G ++AL+
Sbjct: 350 EQPFVHSGLIDLYCKCGDMASGRRVFYG-SKQRNAISWTALMSGYAANGRFDQALRSIVW 408
Query: 381 MEESGVRPDGITFISLLYACSHSGLVEQGCEIFS-KMKNLY 420
M++ G RPD +T ++L C+ ++QG EI +KNL+
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF 449
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 203/464 (43%), Gaps = 53/464 (11%)
Query: 29 SLLSKC---SSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAVTISDALHYALRLFQHFP 85
+LL C SL KQ+H H+ + GL ++ F L+H T ++ A ++F
Sbjct: 116 ALLEACVRRKSLLHGKQVHVHIRINGLESNE-FLRTKLVH-MYTACGSVKDAQKVFDEST 173
Query: 86 NPDTFMYNTLIRXXXXX--XXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKP 143
+ + + +N L+R F +MR V + +S + K A +L+
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMR-ELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 144 GTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFR 203
G + H A ++G VF+ T+L+ MY +CG ARRVFDE+ E ++V W A +
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 204 CGDVAGARGVFGRM-----------------PV--------------------RNLTSWN 226
A G+F M PV +N
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 227 VMLAG----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE 282
+ +G Y K G++ RRVF ++ +SW+ ++ G A NG FDQA + +E
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 283 GIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMA 342
G RP+ V++ VL CA+ A + GK +H + K+ FL S+ +L+ YSKCG
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYP 472
Query: 343 QLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSH 402
+F + R++ +WT++I + +++F M S RPD +T +L CS
Sbjct: 473 IRLFDRLE-QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSD 531
Query: 403 SGLVEQGCEIFSK-MKNLYGIEPTIEHYGCMVDLYGRAARLHKA 445
++ G E+ +K + P + ++ +YG+ L A
Sbjct: 532 LKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSA 573
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 174/412 (42%), Gaps = 47/412 (11%)
Query: 77 ALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVA 136
A R+F D ++ +I F M ++P+S L +
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLG 327
Query: 137 NGGSLKPGTQLHCQAFR-HGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWN 195
+ +LK G ++H + + FV + LI +Y +CGD S RRVF + N ++W
Sbjct: 328 DVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWT 387
Query: 196 AAVTACFRCG-------------------DVAGARGVFGRMPV----------------- 219
A ++ G DV V +PV
Sbjct: 388 ALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATV---LPVCAELRAIKQGKEIHCYA 444
Query: 220 -RNLTSWNV-----MLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAF 273
+NL NV ++ Y+K G R+F + ++ +W+ MI N
Sbjct: 445 LKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGI 504
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
FR +L RP+ V++ VL+ C+ A + GK LHG + K F I V+ +I Y
Sbjct: 505 EVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMY 564
Query: 334 SKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
KCG++ A F ++V S+ +WT+II + +A+ F +M G P+ TF
Sbjct: 565 GKCGDLRSANFSFDAVAVKGSL-TWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTF 623
Query: 394 ISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKA 445
++L CS +G V++ F+ M +Y ++P+ EHY +++L R R+ +A
Sbjct: 624 TAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 15/323 (4%)
Query: 167 ISMYGECGDSESARRVFDEMPEP----NVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL 222
I ++ + E A + D + + N T++A + AC R + + V + + L
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 223 TSWNVMLAG----YTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGS--FDQAFGFF 276
S + YT G + A++VF E + SW+ ++ G +G + F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
E+ G+ N SL+ V + A A A G H K+G + +L+D Y KC
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 337 GNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEM-EESGVRPDGITFIS 395
G V +A+ VF + V R IV W ++IAGLA + EAL LF M E + P+ + +
Sbjct: 263 GKVGLARRVFDEI-VERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTT 321
Query: 396 LLYACSHSGLVEQGCEIFSK-MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI 454
+L ++ G E+ + +K+ +E H G ++DLY + + +
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG-LIDLYCKCGDMASGRR-VFYGSK 379
Query: 455 SPNAVIWRTLLGACSIHGNIELA 477
NA+ W L+ + +G + A
Sbjct: 380 QRNAISWTALMSGYAANGRFDQA 402
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 178/372 (47%), Gaps = 17/372 (4%)
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS 350
L G+ C + A E +++H + + + +I+ YS C + A VF M
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCITPLD----ARSYHTVIEMYSGCRSTDDALNVFNEMP 170
Query: 351 VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGC 410
R+ +W ++I LA +G GE A+ +F E G +PD F ++ +AC G + +G
Sbjct: 171 -KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGL 229
Query: 411 EIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSI 470
F M YG+ ++E Y ++++ L +A +F+ +M + P+ +W TL+ C +
Sbjct: 230 LHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWV 289
Query: 471 HGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWS 530
G +EL + + ++D + SN VA K D M + ++
Sbjct: 290 QGYLELGDRFAELIKKLDASRMSKE---SNAGLVAAKASD-----SAMEKLKELRYCQMI 341
Query: 531 MIEINKVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDS 590
+ K M+ F AG+ + T A L+ ML + G+ P R +EEEEKE+
Sbjct: 342 RDDPKKRMHEFRAGDTSHLGTVSAFRSLKVQML----DIGFVPATRVCFVTVEEEEKEEQ 397
Query: 591 VSKHSEKLAAAFGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHL 650
+ S KLA A I + L +++N+R C D H K+IS +I RD+ ++H
Sbjct: 398 LLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHF 457
Query: 651 FKDGLCSCRDYW 662
+K+G+CSC+DYW
Sbjct: 458 YKNGVCSCKDYW 469
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 99/253 (39%), Gaps = 38/253 (15%)
Query: 204 CGDVAG---ARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMI 260
CG+V AR V + + S++ ++ Y+ A VF+EMP ++ +W TMI
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMI 181
Query: 261 VGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFL 320
LA NG ++A F + EG +P++ V AC G
Sbjct: 182 RCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIG------------------ 223
Query: 321 YISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHE 380
+N L+ S ++R+ + S+ + ++I LA GH +EAL
Sbjct: 224 ---DINEGLLHFES----------MYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 381 MEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAA 440
M V P + +L+ C G +E G +K L + E +V +
Sbjct: 271 M---TVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDS 327
Query: 441 RLHKAYEF-ICQM 452
+ K E CQM
Sbjct: 328 AMEKLKELRYCQM 340
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 164/336 (48%), Gaps = 20/336 (5%)
Query: 151 AFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACFRCG- 205
AF G+ V+ + LIS YG G E A VF+ M E PN+VT+NA + AC + G
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
Query: 206 ---DVAGARGVFGRMPVR-NLTSWNVMLAGYTKAGELGLARRVFSEMP---LKDDV-SWS 257
VA R V+ + ++N +LA ++ G AR +F EM ++ DV S++
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 258 TMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS 317
T++ + G D AF ++ + I PN VS + V+ A+AG + L G M
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 318 GFLYISSVNNALIDTYSKCGNVAMAQLVFRNM-SVG--RSIVSWTSIIAGLAMHGHGEEA 374
G N L+ Y+K G A + R M SVG + +V++ +++ G G +E
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 375 LQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVD 434
++F EM+ V P+ +T+ +L+ S GL ++ EIF + K+ G+ + Y ++D
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA-GLRADVVLYSALID 557
Query: 435 LYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGA 467
+ + A I +M ISPN V + +++ A
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 146/323 (45%), Gaps = 19/323 (5%)
Query: 252 DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS--LTGVLSACAQAGASEFGKI 309
DD ++ +I L + D+A GF+ ++ R NE + ++S + G K
Sbjct: 197 DDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKR 254
Query: 310 LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLA 366
+ G+ +ALI Y + G A VF +M + ++V++ ++I
Sbjct: 255 IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG 314
Query: 367 MHG-HGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPT 425
G ++ + F EM+ +GV+PD ITF SLL CS GL E +F +M N IE
Sbjct: 315 KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR-IEQD 373
Query: 426 IEHYGCMVDLYGRAARLHKAYEFICQMPIS---PNAVIWRTLLGACSIHGNIE--LAELV 480
+ Y ++D + ++ A+E + QMP+ PN V + T++ + G + L
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 481 KARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYG 540
+ R + + + LLS +Y G+ ++ + I R M + K ++ N ++ G
Sbjct: 434 EMRYLGIALDRVSYNTLLS-IYTKVGRSEEALDILREMASVGIKK----DVVTYNALLGG 488
Query: 541 FVAGEKPNEVTEEAHDKLREIML 563
+ K +EV + + RE +L
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVL 511
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 160/388 (41%), Gaps = 31/388 (7%)
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
PD +N+L+ + F +M + D FS+ L + GG + +
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFE 395
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNV----VTWNAAVTACF 202
+ Q +V +T+I + + G + A +F EM + V++N ++
Sbjct: 396 ILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT 455
Query: 203 RCGDVAGARGVFGRMPV----RNLTSWNVMLAGYTKAGELGLARRVFSEMP----LKDDV 254
+ G A + M +++ ++N +L GY K G+ ++VF+EM L + +
Sbjct: 456 KVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLL 515
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM 314
++ST+I G + G + +A FRE G+R + V + ++ A + G L M
Sbjct: 516 TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Query: 315 EKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEA 374
K G N++ID + + + + + S G S+ +S ++ L G
Sbjct: 576 TKEGISPNVVTYNSIIDAFGRSATMDRSA----DYSNGGSLPFSSSALSALT-ETEGNRV 630
Query: 375 LQLFHEM-EESGVRPDGITFISLLYACSHSGLVEQGC--EIFSKMKNLYGIEPTIEHYGC 431
+QLF ++ ES R C G+ E C E+F KM L I+P + +
Sbjct: 631 IQLFGQLTTESNNRT--------TKDC-EEGMQELSCILEVFRKMHQLE-IKPNVVTFSA 680
Query: 432 MVDLYGRAARLHKAYEFICQMPISPNAV 459
+++ R A + ++ + N V
Sbjct: 681 ILNACSRCNSFEDASMLLEELRLFDNKV 708
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Query: 543 AGEKPNEVTE-EAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKEDSVSKHSEKLAAA 601
GEK V +A+ KL+ + +R +AGY P+ + VLHDI+EE KE ++ HSE+LA A
Sbjct: 120 GGEKKAIVDRSKAYVKLKSLGKEVR-DAGYVPETKYVLHDIDEEAKEKALMHHSERLAIA 178
Query: 602 FGIAKLPKGKQLRIVKNLRVCGDCHTVMKLISKFYQVEIIVRDRSRFHLFKDGLCSCRDY 661
FGI P G +R++KNLR+CGDCH +K++S EIIVRD RFH F+DG CSC DY
Sbjct: 179 FGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDY 238
Query: 662 W 662
W
Sbjct: 239 W 239
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 192/431 (44%), Gaps = 21/431 (4%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
IS+A+ ++F P+T +NTLI +M PD F++
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ-PDLFTYG 224
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE- 188
+ G+ G + L + + + V + TT+I + A +F EM
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA 241
PNVVT+N+ + G + A + M R N+ +++ ++ + K G+L A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
+++ EM + D ++S++I G + D+A F ++ + PN V+ ++
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRS 354
+A E G L M + G + + N LI + G+ MAQ +F+ M V
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
I++++ ++ GL +G E+AL +F +++S + PD T+ ++ +G VE G ++F
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 415 KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIH 471
+ +L G++P + Y M+ + R +A +M PN+ + TL+ A
Sbjct: 525 SL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 472 GN-IELAELVK 481
G+ AEL+K
Sbjct: 584 GDKAASAELIK 594
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 160/346 (46%), Gaps = 16/346 (4%)
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
D +Y T+I + F +M + + P+ ++ ++ + N G ++L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACFR 203
+ +V + LI + + G A +++DEM +P++ T+++ +
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 204 CGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVS 255
+ A+ +F M + N+ ++N ++ G+ KA + +F EM + + V+
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
++T+I GL G D A F++++ +G+ P+ ++ + +L + G E ++ +++
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 316 KSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGE 372
KS N +I+ K G V +F ++S V +++ +T++I+G G E
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
EA LF EM+E G P+ T+ +L+ A G E+ +M++
Sbjct: 553 EADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 166/374 (44%), Gaps = 34/374 (9%)
Query: 177 ESARRVFDEM----PEPNVVTWNAAVTACFRCGDVAGARGVFGRMP----VRNLTSWNVM 228
+ A +F EM P P++V +N ++A + + RM +L S+N++
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 229 LAGYTKAGELGLARRVFSEMPLK-----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREG 283
+ + + +L LA V +M +K D V+ S+++ G H +A ++
Sbjct: 122 INCFCRRSQLPLALAVLGKM-MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 284 IRPNEVSLTGVLSAC-----AQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGN 338
+PN V+ ++ A + +++ + F Y + VN K G+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG-----LCKRGD 235
Query: 339 VAMAQLVFRNMSVGR---SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFIS 395
+ +A + + M G+ +V +T+II L + + +AL LF EM+ G+RP+ +T+ S
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 396 LLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL---HKAYEFICQM 452
L+ + G + S M I P + + ++D + + +L K Y+ + +
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 453 PISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD--PNNSGDHVLLSNVYAVAGKWKD 510
I P+ + +L+ +H ++ A+ + + D PN + L+ + A + ++
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG-FCKAKRVEE 413
Query: 511 VVSIRRTMTEQSMV 524
+ + R M+++ +V
Sbjct: 414 GMELFREMSQRGLV 427
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 17/262 (6%)
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGT 145
+PD F Y++LI H F ++ FP+ ++ +KG ++ G
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTAC 201
+L + + G + TLI + GD + A+++F +M P+++T++ +
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 202 FRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DD 253
+ G + A VF + ++ ++N+M+ G KAG++ +F + LK +
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
+ ++TMI G G ++A FRE+ +G PN + ++ A + G L
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 314 MEKSGFL----YISSVNNALID 331
M GF+ IS V N L D
Sbjct: 596 MRSCGFVGDASTISMVINMLHD 617
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 122/291 (41%), Gaps = 13/291 (4%)
Query: 71 SDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAF 130
SDA + + NP+ ++ LI + +M + ++ PD F+++
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSS 365
Query: 131 ALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEP- 189
+ G L + +V TLI + + E +F EM +
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 190 ---NVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLAR 242
N VT+N + F+ GD A+ +F +M ++ +++++L G K G+L A
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 243 RVFSEM---PLKDDV-SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC 298
VF + ++ D+ +++ MI G+ G + + F L +G++PN + T ++S
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 299 AQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM 349
+ G E L M++ G L S N LI + G+ A + + + M
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 188/416 (45%), Gaps = 20/416 (4%)
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P +NTL++ + +M+ V PD+F+F+ G ++ +
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV-PDAFTFSILFDGYSSNEKAEAALG 340
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFD-EMPE---PNVVTWNAAVTACF 202
++ A G + + + L++ + G E A + EM + PN V +N +
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 203 RCGDVAGARGVFGRMPVRNLT----SWNVMLAGYTKAGELGLARRVFSEMPLK----DDV 254
R GD+ GAR M + + ++N ++ + + GE+ A + ++M LK
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEF-GKILHGF 313
+++ +I G FD+ F +E+ G PN VS G L C G+ +I+
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY-GTLINCLCKGSKLLEAQIVKRD 519
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGH 370
ME G + N LID G + A + M + ++V++ ++I GL+M G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 371 GEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYG 430
EA L E+ G++PD T+ SL+ +G V++ ++ +MK GI+PT++ Y
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR-SGIKPTLKTYH 638
Query: 431 CMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAE 486
++ L + + +M + P+ +++ +L ++HG++E A ++ ++ E
Sbjct: 639 LLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 189/470 (40%), Gaps = 25/470 (5%)
Query: 78 LRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVAN 137
L + + P FMY I+ F +M+ H ++P F + + G+
Sbjct: 168 LNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMK-HDRIYPSVFIYNVLIDGLCK 226
Query: 138 GGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVT 193
G + QL + + TLI Y + G+ E + +V + M EP+++T
Sbjct: 227 GKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 194 WNAAVTACFRCGDVAGARGVFGRMP----VRNLTSWNVMLAGYTK----AGELGLARRVF 245
+N + F+ G V A V M V + +++++ GY+ LG+
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 246 SEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASE 305
+ + S ++ L G ++A + +G+ PNEV ++ + G
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 306 FGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSII 362
++ MEK G N LI + + G + A+ M V S+ ++ +I
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 363 AGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA-CSHSGLVEQGCEIFSKMKNLYG 421
G ++ + EME++G P+ +++ +L+ C S L+E +I + G
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE--AQIVKRDMEDRG 524
Query: 422 IEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PISPNAVIWRTLLGACSIHGNIELAE 478
+ P + Y ++D ++ A+ F +M I N V + TL+ S+ G + AE
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 479 --LVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKT 526
L++ + P+ + L+S Y AG + +++ M + T
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISG-YGFAGNVQRCIALYEEMKRSGIKPT 633
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 19/262 (7%)
Query: 233 TKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLT 292
++A +L A R P D S + ++ L F F +L RP++
Sbjct: 126 SEAADLFFALRNEGIYPSSD--SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 293 GVLSACAQ-----AGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR 347
+ A + G F ++ H + S F+Y N LID K + A+ +F
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIY-----NVLIDGLCKGKRMNDAEQLFD 238
Query: 348 NMSVGR---SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
M R S++++ ++I G G+ E++ ++ M+ + P ITF +LL +G
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKA---YEFICQMPISPNAVIW 461
+VE + +MK+L G P + + D Y + A YE + NA
Sbjct: 299 MVEDAENVLKEMKDL-GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357
Query: 462 RTLLGACSIHGNIELAELVKAR 483
LL A G IE AE + R
Sbjct: 358 SILLNALCKEGKIEKAEEILGR 379
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 200/466 (42%), Gaps = 33/466 (7%)
Query: 62 LLLHCAVTISDALHYALRLFQHFPNPDTF---------MYNTLIRXXXXXXXXXXXXHPF 112
L++ ++ DAL Y L L + + F YNTL+ +
Sbjct: 148 LMIKSCDSVGDAL-YVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 113 IQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGE 172
++M V P+ +++ + G G+++ Q + G D F T+LI Y +
Sbjct: 207 MEMLED-KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 173 CGDSESARRVFDEMP----EPNVVTWNAAVTACFRCGDVAGARGVFGRMP-------VRN 221
D +SA +VF+EMP N V + + + A +F +M VR
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 222 LTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV-SWSTMIVGLAHNGSFDQAFGFFRELL 280
T L G + E + E +K ++ +++ +I L F++A ++L
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
+G+ PN ++ +++ + G E + ME + N LI Y K NV
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVH 444
Query: 341 MAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLL 397
A V M V +V++ S+I G G+ + A +L M + G+ PD T+ S++
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 398 YACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PI 454
+ S VE+ C++F ++ G+ P + Y ++D Y +A ++ +A+ + +M
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQ-KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 455 SPNAVIWRTLLGACSIHGNIELAELVKARLAE--MDPNNSGDHVLL 498
PN++ + L+ G ++ A L++ ++ + + P S D +L+
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 185/453 (40%), Gaps = 25/453 (5%)
Query: 56 PLFFGKLLLHCAVTISDALHYALRLFQHFP----NPDTFMYNTLIRXXXXXXXXXXXXHP 111
P FF L L A ++F P + Y LI
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLI-SMY 170
F++M+ FP ++ +K + L + G ++ T LI S+
Sbjct: 311 FVKMK-DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369
Query: 171 GECGDSESARRVFDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLT--- 223
+C E AR + +M E PNV+T+NA + + G + A V M R L+
Sbjct: 370 SQC-KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 224 -SWNVMLAGYTKAG---ELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFREL 279
++N ++ GY K+ +G+ ++ L D V+++++I G +G+FD A+ +
Sbjct: 429 RTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 280 LREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNV 339
G+ P++ + T ++ + ++ E L +E+ G + ALID Y K G V
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 340 AMAQLVFRNMSVGRSI---VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
A L+ M + +++ ++I GL G +EA L +M + G++P T L
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP--- 453
++ G + F +M + G +P Y + Y R RL A + + +M
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLS-SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 454 ISPNAVIWRTLLGACSIHGNIELAELVKARLAE 486
+SP+ + +L+ G A V R+ +
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 133/372 (35%), Gaps = 35/372 (9%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
L Q NP+ MY LI H ++ P+S +F + G+ G
Sbjct: 523 LEQKGVNPNVVMYTALI-DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM----PEPNVVTWN 195
LK T L + + G V T LI + GD + A F +M +P+ T+
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 196 AAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFS----- 246
+ R G + A + +M +L +++ ++ GY G+ A V
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 247 -----------------EMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEV 289
EM + +++ FD +++ + PN
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 290 SLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS-VNNALIDTYSKCGNVAMAQLVFRN 348
S ++ + G + + M+++ + S V NAL+ K A V +
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 349 M-SVGR--SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
M VG + S +I GL G E +F + + G D + + ++ GL
Sbjct: 822 MICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGL 881
Query: 406 VEQGCEIFSKMK 417
VE E+F+ M+
Sbjct: 882 VEAFYELFNVME 893
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 185/411 (45%), Gaps = 58/411 (14%)
Query: 159 HVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACFRCGDVAGARGVF 214
+VF LI + G+ + A +FD+M PNVVT+N + + + +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 215 GRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHN 266
M ++ NL S+NV++ G + G + V +EM + D+V+++T+I G
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 267 GSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG----ASEF---------------- 306
G+F QA E+LR G+ P+ ++ T ++ + +AG A EF
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 307 GKILHGFMEK---------------SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS- 350
++ GF +K +GF NALI+ + G + A V +M
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 351 --VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQ 408
+ +VS++++++G +EAL++ EM E G++PD IT+ SL+ ++
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 409 GCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLL 465
C+++ +M + G+ P Y +++ Y L KA + +M + P+ V + L+
Sbjct: 504 ACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 466 GACSIHGNIELAE--LVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSI 514
+ A+ L+K E P++ H L+ N + ++K VVS+
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI--EFKSVVSL 611
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 148/359 (41%), Gaps = 31/359 (8%)
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
D YNTLI+ +M RH + P ++ + + G++ +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG-LTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACFR 203
Q G + TTL+ + + G A RV EM + P+VVT+NA +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 204 CGDVAGARGVFGRMPVRNLT----SWNVMLAGYTKAGELGLARRVFSEMPLK----DDVS 255
G + A V M + L+ S++ +L+G+ ++ ++ A RV EM K D ++
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
+S++I G +A + E+LR G+ P+E + T +++A G E LH M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 316 KSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI------------------VS 357
+ G L + LI+ +K A+ + + S+ S
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 358 WTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM 416
S+I G M G EA Q+F M +PDG + +++ +G + + ++ +M
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 183/382 (47%), Gaps = 24/382 (6%)
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM----PEPNVVTWNAAVTACFRCG 205
+ + G++ ++ ++L++ Y A + D+M +PN VT+N + F
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200
Query: 206 DVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEM---PLKDDV-SWS 257
+ A + RM + +L ++ V++ G K G+ LA + ++M L+ V ++
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 258 TMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGA-SEFGKILHGFMEK 316
T+I GL D A F+E+ +GIRPN V+ + ++S G S+ ++L +E+
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 317 SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEE 373
+ + + ALID + K G + A+ ++ M S+ SIV+++S+I G MH +E
Sbjct: 321 KINPDVFTFS-ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 374 ALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMV 433
A Q+F M PD +T+ +L+ VE+G E+F +M G+ Y ++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYNILI 438
Query: 434 DLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELVKARL--AEMD 488
+A A E +M + PN + + TLL +G +E A +V L ++M+
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 489 PNNSGDHVLLSNVYAVAGKWKD 510
P ++++ + AGK +D
Sbjct: 499 PTIYTYNIMIEGM-CKAGKVED 519
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 157/347 (45%), Gaps = 16/347 (4%)
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P +YNT+I + F +M + P+ +++ + + N G ++
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACF 202
L + VF + LI + + G A +++DEM +P++VT+++ +
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 203 RCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDV 254
+ A+ +F M + ++ ++N ++ G+ K + VF EM + + V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM 314
+++ +I GL G D A F+E++ +G+ PN ++ +L + G E ++ ++
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 315 EKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHG 371
++S N +I+ K G V +F N+S V +V++ ++I+G G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 372 EEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
EEA LF EM+E G P+ + +L+ A G E E+ +M++
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 152/333 (45%), Gaps = 23/333 (6%)
Query: 174 GDSESARRVFDEMP----EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSW 225
GD++ A + ++M EP V+ +N + + + A +F M + N+ ++
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 226 NVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLR 281
+ +++ G A R+ S+M + D ++S +I G +A + E+++
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 282 EGIRPNEVSLTGVLSA-CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
I P+ V+ + +++ C E ++ + K F + + N LI + K V
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN-TLIKGFCKYKRVE 413
Query: 341 MAQLVFRNMS----VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
VFR MS VG + V++ +I GL G + A ++F EM GV P+ +T+ +L
Sbjct: 414 EGMEVFREMSQRGLVGNT-VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP--- 453
L +G +E+ +F ++ +EPTI Y M++ +A ++ ++ C +
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQR-SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 454 ISPNAVIWRTLLGACSIHGNIELAELVKARLAE 486
+ P+ V + T++ G+ E A+ + + E
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 122 FPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARR 181
FPD ++ +KG ++ G ++ + + G + LI + GD + A+
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 182 VFDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLT----SWNVMLAGYT 233
+F EM PN++T+N + + G + A VF + + ++N+M+ G
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 234 KAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEV 289
KAG++ +F + LK D V+++TMI G GS ++A F+E+ +G PN
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 290 SLTGVLSACAQAGASEFGKILHGFMEKSGF 319
++ A + G E L M GF
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGF 602
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 185/432 (42%), Gaps = 54/432 (12%)
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P YN ++ ++ + + PD++++ + G + Q
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACF 202
+ + GF L+ +YG+ + A +V +EM P++VT+N+ ++A
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 203 RCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMP---LKDDV- 254
R G + A + +M + ++ ++ +L+G+ +AG++ A +F EM K ++
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM 314
+++ I + G F + F E+ G+ P+ V+ +L+ Q G + M
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 315 EKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHG 371
+++GF+ N LI YS+CG+ A V+R M V + ++ +++A LA G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 372 EEALQLFHEMEESGVRPDGITFISLLYA-------------------------------- 399
E++ ++ EME+ +P+ +T+ SLL+A
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTL 600
Query: 400 ---CSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKA---YEFICQMP 453
CS L+ + FS++K G P I MV +YGR + KA +++ +
Sbjct: 601 VLVCSKCDLLPEAERAFSELKE-RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 454 ISPNAVIWRTLL 465
+P+ + +L+
Sbjct: 660 FTPSMATYNSLM 671
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 178/414 (42%), Gaps = 55/414 (13%)
Query: 162 VGTTLISMYGECGDSESARRVFDEMPEP----NVVTWNAAVTACFRCGDVAGARGVFGRM 217
V +ISM G+ G SA +F+ + E +V ++ + ++A G A VF +M
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 218 PVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAF 273
L ++NV+L + K G W+ +
Sbjct: 235 EEDGCKPTLITYNVILNVFGKMG-----------------TPWNKIT------------- 264
Query: 274 GFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTY 333
++ +GI P+ + +++ C + + + M+ +GF Y NAL+D Y
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 334 SKCGNVAMAQLVFRNMSVG---RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDG 390
K A V M + SIV++ S+I+ A G +EA++L ++M E G +PD
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 391 ITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR---LHKAYE 447
T+ +LL +G VE IF +M+N G +P I + + +YG + + K ++
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 448 FICQMPISPNAVIWRTLLGACSIHG-NIELAELVKA-RLAEMDPNNSGDHVLLSNVYAVA 505
I +SP+ V W TLL +G + E++ + K + A P + L+S Y+
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS-AYSRC 502
Query: 506 GKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAG---EKPNEVTEEAHD 556
G ++ +++ R M + + TP S N V+ G E+ +V E D
Sbjct: 503 GSFEQAMTVYRRMLDAGV--TPDLST--YNTVLAALARGGMWEQSEKVLAEMED 552
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 162/364 (44%), Gaps = 21/364 (5%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P ++ + A G L +L Q G VF TTL+S + G ESA +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 183 FDEMP----EPNVVTWNAAVTACFRCGDVAGARGVFGRMPV----RNLTSWNVMLAGYTK 234
F+EM +PN+ T+NA + G +F + V ++ +WN +LA + +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 235 AGELGLARRVFSEMP----LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
G VF EM + + +++T+I + GSF+QA +R +L G+ P+ +
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNV----AMAQLVF 346
VL+A A+ G E + + ME +L+ Y+ + ++A+ V+
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 347 RNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLV 406
+ R+++ T ++ + EA + F E++E G PD T S++ +V
Sbjct: 587 SGVIEPRAVLLKTLVLV-CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 407 EQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PISPNAVIWRT 463
+ + MK G P++ Y ++ ++ R+A K+ E + ++ I P+ + + T
Sbjct: 646 AKANGVLDYMKE-RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 464 LLGA 467
++ A
Sbjct: 705 VIYA 708
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 161/410 (39%), Gaps = 56/410 (13%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYG 171
F++ + + ++ +S A + + G + + GF V+ T+LIS +
Sbjct: 161 FMKQKDYQSMLDNSV-VAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA 219
Query: 172 ECGDSESARRVFDEMPE----------------------------------------PNV 191
G A VF +M E P+
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279
Query: 192 VTWNAAVTACFRCGDVAGARGVFGRMPVRNLT----SWNVMLAGYTKAGELGLARRVFSE 247
T+N +T C R A VF M + ++N +L Y K+ A +V +E
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 248 MPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGA 303
M L V+++++I A +G D+A ++ +G +P+ + T +LS +AG
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 304 SEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV---GRSIVSWTS 360
E + M +G NA I Y G +F ++V IV+W +
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 361 IIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLY 420
++A +G E +F EM+ +G P+ TF +L+ A S G EQ ++ +M +
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA- 518
Query: 421 GIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGA 467
G+ P + Y ++ R ++ + + +M PN + + +LL A
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 173/430 (40%), Gaps = 52/430 (12%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
+ +A+ ++ + PD F Y TL+ F +MR + P+ +F
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR-NAGCKPNICTFN 423
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE- 188
+K N G ++ + G + TL++++G+ G VF EM
Sbjct: 424 AFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVFGRM----PVRNLTSWNVMLAGYTKAGELGLA 241
P T+N ++A RCG A V+ RM +L+++N +LA + G +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 242 RRVFSEMP----LKDDVSWSTMI--------VGLAHNGS--------------------- 268
+V +EM +++++ +++ +GL H+ +
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 269 ------FDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
+A F EL G P+ +L ++S + + +M++ GF
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
+ N+L+ +S+ + ++ + R + + I+S+ ++I + +A ++F
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRA 439
EM SG+ PD IT+ + + + + + E+ + M +G P Y +VD Y +
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKL 782
Query: 440 ARLHKAYEFI 449
R +A F+
Sbjct: 783 NRKDEAKLFV 792
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 12/239 (5%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P+ ++ L ANG + L + + + + TL+ + +C A R
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 183 FDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLT----SWNVMLAGYTK 234
F E+ E P++ T N+ V+ R VA A GV M R T ++N ++ +++
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
+ + G + + E+ K D +S++T+I N A F E+ GI P+ ++
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM 349
+ + A E + +M K G + N+++D Y K A+L ++
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 195/432 (45%), Gaps = 23/432 (5%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
ISDA+ ++ + PDTF + TLI QM + PD ++
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ-PDLVTYG 227
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE- 188
+ G+ G + L + + + V + T+I + + A +F EM
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA 241
P+V T+++ ++ G + A + M R N+ +++ ++ + K G+L A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
+++ EM + D ++S++I G + D+A F ++ + PN V+ + ++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM-SVGR--S 354
+A E G L M + G + + LI + + + AQ+VF+ M SVG +
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
I+++ ++ GL +G +A+ +F ++ S + PD T+ ++ +G VE G E+F
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 415 KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM----PISPNAVIWRTLLGACSI 470
+ +L G+ P + Y M+ + R +A + +M P+ PN+ + TL+ A
Sbjct: 528 NL-SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLR 585
Query: 471 HGNIEL-AELVK 481
G+ E AEL+K
Sbjct: 586 DGDREASAELIK 597
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 157/346 (45%), Gaps = 16/346 (4%)
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
D +YNT+I + F +M + + PD F+++ + + N G ++L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMD-NKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACFR 203
+ +V + LI + + G A +++DEM +P++ T+++ +
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 204 CGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVS 255
+ A+ +F M + N+ +++ ++ G+ KA + +F EM + + V+
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
++T+I G D A F++++ G+ PN ++ +L + G ++ +++
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 316 KSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGE 372
+S N +I+ K G V +F N+S V +++++ ++I+G G E
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
EA L +M+E G P+ T+ +L+ A G E E+ +M++
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 175/428 (40%), Gaps = 57/428 (13%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD + + L G + + L Q G+ F TTLI + A +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 183 FDEMP----EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS----WNVMLAGYTK 234
D+M +P++VT+ V + GD+ A + +M + + +N ++ G K
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
+ A +F+EM K D ++S++I L + G + A +++ I PN V+
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSG-----FLYISSVN------------------- 326
+ ++ A + G + L+ M K F Y S +N
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 327 -----------NALIDTYSKCGNVAMAQLVFRNMS----VGRSIVSWTSIIAGLAMHGHG 371
+ LI + K V +FR MS VG + V++T++I G
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT-VTYTTLIHGFFQARDC 449
Query: 372 EEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGC 431
+ A +F +M GV P+ +T+ LL +G + + +F ++ +EP I Y
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR-STMEPDIYTYNI 508
Query: 432 MVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD 488
M++ +A ++ +E C + +SPN + + T++ G+ E A+ + ++ E
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 489 P-NNSGDH 495
P NSG +
Sbjct: 569 PLPNSGTY 576
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 161/368 (43%), Gaps = 22/368 (5%)
Query: 177 ESARRVFDEM----PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV----RNLTSWNVM 228
+ A +F +M P P++V +N ++A + + +M +L ++++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 229 LAGYTKAGELGLARRVFSEMPL----KDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
+ + + +L LA V ++M D V+ S+++ G H+ A +++ G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
+P+ + T ++ + L M + G +++ K G++ +A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 345 VFRNMSVGR---SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACS 401
+ + M G+ +V + +II GL + H ++AL LF EM+ G+RPD T+ SL+
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 402 HSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLY---GRAARLHKAYEFICQMPISPNA 458
+ G + S M I P + + ++D + G+ K Y+ + + I P+
Sbjct: 305 NYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 459 VIWRTLLGACSIHGNIELAELVKARLAEMD--PNNSGDHVLLSNVYAVAGKWKDVVSIRR 516
+ +L+ +H ++ A+ + + D PN L+ + A + ++ + + R
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG-FCKAKRVEEGMELFR 422
Query: 517 TMTEQSMV 524
M+++ +V
Sbjct: 423 EMSQRGLV 430
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 13/246 (5%)
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGT 145
+PD F Y++LI H F ++ FP+ +++ +KG ++ G
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTAC 201
+L + + G + TTLI + + D ++A+ VF +M PN++T+N +
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 202 FRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DD 253
+ G +A A VF + ++ ++N+M+ G KAG++ +F + LK +
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
++++TMI G GS ++A +++ +G PN + ++ A + G E L
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 314 MEKSGF 319
M GF
Sbjct: 599 MRSCGF 604
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 162/362 (44%), Gaps = 27/362 (7%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD +F L G + ++ L Q GF +V TTLI + A +
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 183 FDEM----PEPNVVTWNAAVTACF---RCGDVAG-ARGVFGRMPVRNLTSWNVMLAGYTK 234
F++M PNVVT+NA VT R GD A R + R N+ ++ ++ + K
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 235 AGELGLARRVFS---EMPLKDDV-SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
G+L A+ +++ +M + DV ++ ++I GL G D+A F + R G PNEV
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS 350
T ++ ++ E G + M + G + + LI Y G +AQ VF MS
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 351 VGRS---IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVE 407
R+ I ++ ++ GL +G E+AL +F M + + + +T+ ++ G VE
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 408 QG----CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVI 460
C +FSK G++P + Y M+ + R +H+A +M PN +
Sbjct: 451 DAFDLFCSLFSK-----GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Query: 461 WR 462
++
Sbjct: 506 YK 507
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 15/283 (5%)
Query: 221 NLTSWNVMLAGYTKAGELGLARRVFSE---MPLKDDV-SWSTMIVGLAHNGSFDQAFGFF 276
+L ++ +L GY + A +F + M K +V +++T+I L N + A F
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGA-SEFGKILHGFMEKSGFLYISSVNNALIDTYSK 335
++ G RPN V+ +++ + G + +L M++ + + ALID + K
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT-ALIDAFVK 270
Query: 336 CGNVAMAQLVFR---NMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGIT 392
G + A+ ++ MSV + ++ S+I GL M+G +EA Q+F+ ME +G P+ +
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 393 FISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM 452
+ +L++ S VE G +IF +M + TI Y ++ Y R A E QM
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT-YTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 453 P---ISPNAVIWRTLLGACSIHGNIELAELV--KARLAEMDPN 490
P+ + LL +G +E A ++ R EMD N
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 16/225 (7%)
Query: 113 IQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGE 172
IQM +V+PD F++ + G+ G L Q+ R+G + + TTLI + +
Sbjct: 285 IQM----SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Query: 173 CGDSESARRVFDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTS 224
E ++F EM + N +T+ + G A+ VF +M R ++ +
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 225 WNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELL 280
+NV+L G G++ A +F M + + V+++ +I G+ G + AF F L
Sbjct: 401 YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSV 325
+G++PN ++ T ++S + G L M++ GFL SV
Sbjct: 461 SKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 159/361 (44%), Gaps = 32/361 (8%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD+ +++ L + N ++ L + R G V+ T ++ + + G E AR+
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 183 FDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRM----PVRNLTSWNVMLAGYTK 234
F+EM E PNVVT+ A + A + V+ A +F M + N+ +++ ++ G+ K
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 235 AGELGLARRVFSEMPLKDDV--------------------SWSTMIVGLAHNGSFDQAFG 274
AG++ A ++F M DV ++ ++ G + ++A
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 275 FFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYS 334
+ EG PN++ ++ + G + + + M + GF ++LID Y
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 335 KCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGI 391
K +A V M S ++V +T +I GL G +EA +L MEE G +P+ +
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 392 TFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQ 451
T+ +++ G +E E+ +M + G+ P Y ++D + L A+ + +
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGS-KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 452 M 452
M
Sbjct: 840 M 840
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 149/352 (42%), Gaps = 44/352 (12%)
Query: 173 CGDSES--------ARRVFDEMPEPNVVTWNAAVTACFRCGDVAGA--------RGVFGR 216
CGD +S A + + EM VV V++ RC AG R + G+
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 217 MPVRNLTSWNVMLAGYTKAGELGLARRVFSEMP----LKDDVSWSTMIVGLAHNGSFDQA 272
+ + ++++ +L A ++ LA +F EM + D +++ M+ G +QA
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 273 FGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDT 332
+F E+ G PN V+ T ++ A +A + L M G L +ALID
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 333 YSKCGNVAMAQLVFRNMSVGR-------------------SIVSWTSIIAGLAMHGHGEE 373
+ K G V A +F M + ++V++ +++ G EE
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 374 ALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMV 433
A +L M G P+ I + +L+ G +++ E+ ++M +G T+ Y ++
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE-HGFPATLYTYSSLI 716
Query: 434 DLYGRAARLHKAYEFICQM---PISPNAVIWRTLL-GACSIHGNIELAELVK 481
D Y + R A + + +M +PN VI+ ++ G C + E +L++
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 147/369 (39%), Gaps = 71/369 (19%)
Query: 221 NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAH----NGSFDQAFGFF 276
N+ +++ +L G +LG +RV + M ++ + L H +G A+
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 277 RELLREGIRPNEV--------------SLTGVLSACAQAGASEF---GKILH-------- 311
+++++ G P V SL L A+ SE G +L+
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 312 ------GFMEKS----------GFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVG--- 352
G EK+ GF+ +S + +++ + +A L+F M G
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEI 412
+ ++T ++ G E+A + F+EM E G P+ +T+ +L++A + V E+
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 413 FSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPIS----------------- 455
F M + G P I Y ++D + +A ++ KA + +M S
Sbjct: 576 FETMLS-EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 456 --PNAVIWRTLL-GACSIHGNIELAELVKARLAE-MDPNNSGDHVLLSNVYAVAGKWKDV 511
PN V + LL G C H E +L+ A E +PN L+ + V GK +
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV-GKLDEA 693
Query: 512 VSIRRTMTE 520
++ M+E
Sbjct: 694 QEVKTEMSE 702
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 175/398 (43%), Gaps = 17/398 (4%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
I +A H L + PD Y+T++ I++ + + P+S+ +
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV-WKLIEVMKRKGLKPNSYIYG 320
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE- 188
+ + L + + R G V TTLI + + GD +A + F EM
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYTKAGELGLA 241
P+V+T+ A ++ + GD+ A +F M + L ++ ++ GY KAG + A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
RV + M + V+++T+I GL G D A E+ + G++PN + +++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRS 354
++G E L G E +G + L+D Y K G + AQ + + M + +
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
IV++ ++ G +HG E+ +L + M G+ P+ TF SL+ ++ I+
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 415 KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM 452
M + G+ P + Y +V + +A + +A+ +M
Sbjct: 621 DMCS-RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 170/372 (45%), Gaps = 19/372 (5%)
Query: 127 SFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM 186
S+ + V G +K L G+ V +T+++ Y G+ + ++ + M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 187 P----EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYTKAGEL 238
+PN + + + R +A A F M + + + ++ G+ K G++
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 239 GLARRVFSEMPLKD---DV-SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGV 294
A + F EM +D DV +++ +I G G +A F E+ +G+ P+ V+ T +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 295 LSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SV 351
++ +AG + +H M ++G LID K G++ A + M +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
+I ++ SI+ GL G+ EEA++L E E +G+ D +T+ +L+ A SG +++ E
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 412 IFSKMKNLYGIEPTIEHYGCMVD---LYGRAARLHKAYEFICQMPISPNAVIWRTLLGAC 468
I +M G++PTI + +++ L+G K ++ I+PNA + +L+
Sbjct: 548 ILKEMLG-KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 469 SIHGNIELAELV 480
I N++ A +
Sbjct: 607 CIRNNLKAATAI 618
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 146/344 (42%), Gaps = 61/344 (17%)
Query: 155 GFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVV----TWNAAVTACFR-CGDVAG 209
G D VF + + G ARRVF++M +V + N +T + C A
Sbjct: 172 GSDPRVF--DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 210 ARGVFGRMP----VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIV 261
A VF P N+ S+N+++ + G + A + M LK D +S+ST++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEV---SLTGVL-SACAQAGASE-FGKILHGFMEK 316
G G D+ + + R+G++PN S+ G+L C A A E F +++ +
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI-----R 344
Query: 317 SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEE 373
G L + V LID + K G++ A F M + ++++T+II+G G E
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 374 ALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMV 433
A +LFHEM G+ PD +TF L+ +G MK+ + + + GC
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAG----------HMKDAFRVHNHMIQAGC-- 452
Query: 434 DLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
SPN V + TL+ G+++ A
Sbjct: 453 ---------------------SPNVVTYTTLIDGLCKEGDLDSA 475
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 175/398 (43%), Gaps = 17/398 (4%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
I +A H L + PD Y+T++ I++ + + P+S+ +
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV-WKLIEVMKRKGLKPNSYIYG 320
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE- 188
+ + L + + R G V TTLI + + GD +A + F EM
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYTKAGELGLA 241
P+V+T+ A ++ + GD+ A +F M + L ++ ++ GY KAG + A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
RV + M + V+++T+I GL G D A E+ + G++PN + +++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRS 354
++G E L G E +G + L+D Y K G + AQ + + M + +
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
IV++ ++ G +HG E+ +L + M G+ P+ TF SL+ ++ I+
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 415 KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM 452
M + G+ P + Y +V + +A + +A+ +M
Sbjct: 621 DMCS-RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 170/372 (45%), Gaps = 19/372 (5%)
Query: 127 SFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM 186
S+ + V G +K L G+ V +T+++ Y G+ + ++ + M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 187 P----EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYTKAGEL 238
+PN + + + R +A A F M + + + ++ G+ K G++
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 239 GLARRVFSEMPLKD---DV-SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGV 294
A + F EM +D DV +++ +I G G +A F E+ +G+ P+ V+ T +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 295 LSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SV 351
++ +AG + +H M ++G LID K G++ A + M +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 352 GRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
+I ++ SI+ GL G+ EEA++L E E +G+ D +T+ +L+ A SG +++ E
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 412 IFSKMKNLYGIEPTIEHYGCMVD---LYGRAARLHKAYEFICQMPISPNAVIWRTLLGAC 468
I +M G++PTI + +++ L+G K ++ I+PNA + +L+
Sbjct: 548 ILKEMLG-KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 469 SIHGNIELAELV 480
I N++ A +
Sbjct: 607 CIRNNLKAATAI 618
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 146/344 (42%), Gaps = 61/344 (17%)
Query: 155 GFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVV----TWNAAVTACFR-CGDVAG 209
G D VF + + G ARRVF++M +V + N +T + C A
Sbjct: 172 GSDPRVF--DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 210 ARGVFGRMP----VRNLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIV 261
A VF P N+ S+N+++ + G + A + M LK D +S+ST++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEV---SLTGVL-SACAQAGASE-FGKILHGFMEK 316
G G D+ + + R+G++PN S+ G+L C A A E F +++ +
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI-----R 344
Query: 317 SGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEE 373
G L + V LID + K G++ A F M + ++++T+II+G G E
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 374 ALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMV 433
A +LFHEM G+ PD +TF L+ +G MK+ + + + GC
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAG----------HMKDAFRVHNHMIQAGC-- 452
Query: 434 DLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
SPN V + TL+ G+++ A
Sbjct: 453 ---------------------SPNVVTYTTLIDGLCKEGDLDSA 475
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/505 (20%), Positives = 209/505 (41%), Gaps = 58/505 (11%)
Query: 26 RWVSLLSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLHCAV---TISDALHYALRLFQ 82
R +S L + +SL K++++ + G+ + +LL+ ++ ++AL R +
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVT-TQLLMRASLREEKPAEALEVLSRAIE 261
Query: 83 HFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLK 142
PD+ +Y+ ++ +M+ P ++ + G++
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 143 PGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM----PEPNVVTWNAAV 198
+L + G +V T+LI+ + + D SA +FD+M P PN VT++ +
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 199 TACFRCGDVAGARGVFGRMPVRNLT-----------SW---------------------- 225
+ G++ A + +M V LT W
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Query: 226 -----NVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFF 276
N +L+ K G+ A + S+M + + VS++ +++G + D A F
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
+L +G++PN + + ++ C + + + M S V +I+ K
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561
Query: 337 GNVAMAQLVFRNMSVGR----SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGIT 392
G + A+ + NM + S +S+ SII G G + A+ + EM +G+ P+ IT
Sbjct: 562 GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVIT 621
Query: 393 FISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM 452
+ SL+ + ++Q E+ +MKN G++ I YG ++D + + + + A ++
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKN-KGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 453 ---PISPNAVIWRTLLGACSIHGNI 474
++P+ I+ +L+ GN+
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNM 705
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 164/386 (42%), Gaps = 32/386 (8%)
Query: 121 VFPDSFSFAFA--------LKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGE 172
+F +SF A L + G T+L + G +V + M G
Sbjct: 431 LFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV--MLGH 488
Query: 173 C--GDSESARRVFDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL---- 222
C + + AR VF + E PN T++ + CFR D A V M N+
Sbjct: 489 CRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNG 548
Query: 223 TSWNVMLAGYTKAGELGLARRVFSEMPLKDDV-----SWSTMIVGLAHNGSFDQAFGFFR 277
+ ++ G K G+ AR + + M + + S++++I G G D A +
Sbjct: 549 VVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYE 608
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG 337
E+ GI PN ++ T +++ + + + M+ G ALID + K
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 338 NVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFI 394
N+ A +F + + S + S+I+G G+ AL L+ +M + G+R D T+
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 395 SLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVD---LYGRAARLHKAYEFICQ 451
+L+ G + E++++M+ + G+ P Y +V+ G+ ++ K +E + +
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAV-GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK 787
Query: 452 MPISPNAVIWRTLLGACSIHGNIELA 477
++PN +I+ ++ GN++ A
Sbjct: 788 NNVTPNVLIYNAVIAGHYREGNLDEA 813
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 141/329 (42%), Gaps = 21/329 (6%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P++++++ + G + ++ + + V T+I+ + G + AR +
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 183 FDEMPEP-----NVVTWNAAVTACFRCGDVAGARGVFGRM------PVRNLTSWNVMLAG 231
M E + +++N+ + F+ G++ A + M P N+ ++ ++ G
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISP--NVITYTSLMNG 628
Query: 232 YTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
K + A + EM K D ++ +I G + + A F ELL EG+ P+
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR 347
+ ++S G L+ M K G LID K GN+ +A ++
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748
Query: 348 NM-SVGR--SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
M +VG + +T I+ GL+ G + +++F EM+++ V P+ + + +++ G
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMV 433
+++ + +M + GI P + +V
Sbjct: 809 NLDEAFRLHDEMLD-KGILPDGATFDILV 836
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 32/333 (9%)
Query: 177 ESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL------TSWNVMLA 230
E R + EP+ + ++ AV AC + D+A A + M + L T +V+LA
Sbjct: 254 EVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILA 313
Query: 231 GYTKAGELGLARRVFSEMPLKDDVSW-----STMIVGLAHNGSFDQAFGFFRELLREGIR 285
K G + A R+ EM L D +S +++I G N A F ++ +EG
Sbjct: 314 S-VKQGNMDDAIRLKDEM-LSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 286 PNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
PN V+ + ++ + G E + ME G + +I + K A +
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 346 FR--------NMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLL 397
F N+ V +I+SW L G +EA +L +ME G+ P+ +++ +++
Sbjct: 432 FDESFETGLANVFVCNTILSW------LCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 398 YACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---I 454
++ +FS + G++P Y ++D R A E + M I
Sbjct: 486 LGHCRQKNMDLARIVFSNILE-KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Query: 455 SPNAVIWRTLL-GACSIHGNIELAELVKARLAE 486
N V+++T++ G C + + EL+ + E
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 180/431 (41%), Gaps = 56/431 (12%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD+ +F+ + G+ G + +L + G + L++ G A +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 183 FDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYTK 234
D M E PN VT+ + + G A A + +M R + +++++ G K
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
G L A +F+EM +K D + ++T+I G + G +D R++++ I P+ V+
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSGF-----LYISSVN------------------- 326
+ ++ + G + LH M + G Y S ++
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 327 -----------NALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGE 372
N LI+ Y K + +FR MS V V++ ++I G G E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCM 432
A +LF EM VRPD +++ LL +G E+ EIF K++ +E I Y +
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK-SKMELDIGIYNII 498
Query: 433 VDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELVKARLAE--M 487
+ A+++ A++ C +P + P+ + ++G G++ A+L+ ++ E
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 488 DPNNSGDHVLL 498
PN ++L+
Sbjct: 559 SPNGCTYNILI 569
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 153/398 (38%), Gaps = 51/398 (12%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
+SDA+ R+ + P+ Y +++ +M D+ ++
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL-DAVKYS 251
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE- 188
+ G+ GSL L + GF + + TTLI + G + ++ +M +
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR------------------------- 220
P+VV ++A + + G + A + M R
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 221 --------------NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIVG 262
N+ ++N+++ GY KA + +F +M L+ D V+++T+I G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
G + A F+E++ +RP+ VS +L G E + +EKS
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
+ N +I V A +F ++ V + ++ +I GL G EA LF
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
+MEE G P+G T+ L+ A G + ++ ++K
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 15/268 (5%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
+ Q +PDT Y +LI H + + P+ +F + G
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANH-MLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWN 195
+ G +L + G TLI + E G E A+ +F EM P++V++
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 196 AAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK 251
+ G+ A +F ++ ++ +N+++ G A ++ A +F +PLK
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 252 ----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA-CAQAGASEF 306
D +++ MI GL GS +A FR++ +G PN + ++ A + A++
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 307 GKILHGFMEKSGFLYISSVNNALIDTYS 334
K++ +++ GF +S ++D S
Sbjct: 582 AKLIEE-IKRCGFSVDASTVKMVVDMLS 608
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 144/327 (44%), Gaps = 20/327 (6%)
Query: 243 RVFSEMPL-KDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQA 301
RVFS + K VS+ + + D A F+E+ R RP + + + S A+
Sbjct: 26 RVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVART 85
Query: 302 GASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMA-QLVFRNMSVGR--SIVSW 358
+ L ME G + + +I+ +C +++A + + + +G V++
Sbjct: 86 KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTF 145
Query: 359 TSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
+++I GL + G EAL+L M E G +P IT +L+ +G V + +M
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 419 LYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PISPNAVIWRTLLGACSIHGNIE 475
G +P YG ++ + ++ + A E + +M I +AV + ++ G+++
Sbjct: 206 -TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 476 LAELVKARLAEMDPNN-SGDHVLLSNV---YAVAGKWKDVVSIRRTMTEQSMVKTPGWSM 531
A + EM+ D ++ + + + AG+W D + R M ++ + TP +
Sbjct: 265 NAFNL---FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI--TP--DV 317
Query: 532 IEINKVMYGFVAGEKPNEVTEEAHDKL 558
+ + ++ FV K E EE H ++
Sbjct: 318 VAFSALIDCFVKEGKLRE-AEELHKEM 343
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 149/347 (42%), Gaps = 38/347 (10%)
Query: 112 FIQ-MRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMY 170
FIQ M FPD ++F + G+ G +K ++ + G+D V+ ++IS
Sbjct: 281 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340
Query: 171 GECGDSESARRVFDEMP----EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTSWN 226
+ G+ + A V D+M PN VT+N ++ + V A
Sbjct: 341 CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT--------------- 385
Query: 227 VMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRP 286
LAR + S+ L D +++++I GL + A F E+ +G P
Sbjct: 386 ------------ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 287 NEVSLTGVL-SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV 345
+E + ++ S C++ E +L ME SG N LID + K A+ +
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQ-MELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 346 FRNMS---VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSH 402
F M V R+ V++ ++I GL E+A QL +M G +PD T+ SLL
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 403 SGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFI 449
G +++ +I M + G EP I YG ++ +A R+ A + +
Sbjct: 553 GGDIKKAADIVQAMTS-NGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 150/308 (48%), Gaps = 21/308 (6%)
Query: 190 NVVTWNAAVTACFRCGDVAGARGVFGRM------PVRNLTSWNVMLAGYTKAGELGLARR 243
++ T+N + C V+ A + G+M P R + ++ G+ + + A
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDR--VTIGSLVNGFCRRNRVSDAVS 176
Query: 244 VFSEMP----LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA-C 298
+ +M D V+++ +I L + AF FF+E+ R+GIRPN V+ T +++ C
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 299 AQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSI 355
+ S+ ++L ++K + + + AL+D + K G V A+ +F M S+ I
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYS-ALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
V+++S+I GL +H +EA Q+F M G D +++ +L+ + VE G ++F +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 416 MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHG 472
M G+ Y ++ + +A + KA EF QM ISP+ + LLG +G
Sbjct: 356 MSQ-RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 473 NIELAELV 480
+E A ++
Sbjct: 415 ELEKALVI 422
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 151/360 (41%), Gaps = 45/360 (12%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
+SDA+ ++ + PD YN +I F ++ R + P+ ++
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-IRPNVVTYT 229
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP-- 187
+ G+ N +L + +V + L+ + + G A+ +F+EM
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 188 --EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA 241
+P++VT+++ + + A +F M + ++ S+N ++ G+ KA +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 242 RRVFSEMP----LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
++F EM + + V+++T+I G G D+A FF ++ GI P+ + +L
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVS 357
G E ++ M+K R M + IV+
Sbjct: 410 LCDNGELEKALVIFEDMQK------------------------------REMDL--DIVT 437
Query: 358 WTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
+T++I G+ G EEA LF + G++PD +T+ +++ GL+ + +++KMK
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 94/219 (42%), Gaps = 13/219 (5%)
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGT 145
+PD Y++LI F + D S+ + G ++ G
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTAC 201
+L + + G ++ TLI + + GD + A+ F +M P++ T+N +
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 202 FRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DD 253
G++ A +F M R ++ ++ ++ G K G++ A +F + LK D
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLT 292
V+++TM+ GL G + + ++ +EG+ N+ +L+
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 173/417 (41%), Gaps = 54/417 (12%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P++ +F+ + G+ G + +L + G + TL++ G A +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 183 FDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYTK 234
D+M E PN VT+ + + G A A + +M RN+ +++++ G K
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
G L A +F+EM +K + ++++ +I G + G +D R++++ I PN V+
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSG-----FLYISSVN------------------- 326
+ ++ + + G + LH M G Y S ++
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 327 -----------NALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGE 372
N LI+ Y K + +FR MS V V++ ++I G G
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCM 432
A +LF EM V P+ +T+ LL +G E+ EIF K++ +E I Y +
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK-SKMELDIGIYNII 514
Query: 433 VDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELVKARLAE 486
+ A+++ A++ C +P + P + ++G G + AEL+ ++ E
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 157/361 (43%), Gaps = 23/361 (6%)
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACFRCG 205
+ + G++ + +TLI+ G A + D M E P+++T N V G
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 206 DVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWS 257
A A + +M N ++ +L K+G+ LA + +M + D V +S
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 258 TMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS 317
+I GL +GS D AF F E+ +GI N ++ ++ AG + G L M K
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 318 GFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEEA 374
+ LID++ K G + A+ + + M + +++TS+I G H ++A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 375 LQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVD 434
Q+ M G P+ TF L+ + ++ G E+F KM +L G+ Y ++
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQ 446
Query: 435 LYGRAARLHKAYEFICQM---PISPNAVIWRTLLGACSIHGN----IELAELVKARLAEM 487
+ +L+ A E +M + PN V ++ LL +G +E+ E ++ E+
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 488 D 488
D
Sbjct: 507 D 507
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 130/307 (42%), Gaps = 15/307 (4%)
Query: 126 FSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDE 185
++ + G N G G +L + + +V + LI + + G A + E
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 186 MPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGE 237
M P+ +T+ + + + + A + M + N+ ++N+++ GY KA
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 238 LGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTG 293
+ +F +M L+ D V+++T+I G G + A F+E++ + PN V+
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 294 VLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---S 350
+L G SE + +EKS + N +I V A +F ++
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 351 VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGC 410
V + ++ +I GL G EA LF +MEE G PDG T+ L+ A G +
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 411 EIFSKMK 417
++ ++K
Sbjct: 599 KLIEELK 605
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 182/417 (43%), Gaps = 22/417 (5%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
ISDA+ ++ + PD+F +NTLI +M PD ++
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ-PDLVTYG 225
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE- 188
+ G+ G + L + + + V + T+I + A +F EM
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA 241
PNVVT+N+ + G + A + M R N+ +++ ++ + K G+L A
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
+++ EM + D ++S++I G + D+A F ++ + PN V+ ++
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRS 354
+A + G L M + G + + LI + + AQ+VF+ M V
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
I++++ ++ GL +G E AL +F ++ S + PD T+ ++ +G VE G ++F
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 415 KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM----PISPNAVIWRTLLGA 467
+ +L G++P + Y M+ + R +A +M P+ P++ + TL+ A
Sbjct: 526 SL-SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRA 580
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 165/364 (45%), Gaps = 16/364 (4%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
I AL ++ Q P +YNT+I + F +M + + P+ ++
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD-NKGIRPNVVTYN 295
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP-- 187
++ + N G ++L + +V + LI + + G A +++DEM
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 188 --EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA 241
+P++ T+++ + + A+ +F M + N+ ++N ++ G+ KA +
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
+F EM + + V+++T+I G D A F++++ +G+ P+ ++ + +L
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRS 354
G E ++ ++++S N +I+ K G V +F ++S V +
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
+V++T++++G G EEA LF EM+E G PD T+ +L+ A G E+
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Query: 415 KMKN 418
+M++
Sbjct: 596 EMRS 599
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 165/421 (39%), Gaps = 56/421 (13%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD + L G +G + L Q G+ F TLI + A +
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 183 FDEMP----EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS----WNVMLAGYTK 234
D M +P++VT+ V + GD+ A + +M + +N ++
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
+ A +F+EM K + V+++++I L + G + A +++ I PN V+
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSG-----FLYISSVN------------------- 326
+ ++ A + G + L+ M K F Y S +N
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 327 -----------NALIDTYSKCGNVAMAQLVFRNMS----VGRSIVSWTSIIAGLAMHGHG 371
N LI + K V +FR MS VG + V++T++I G
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT-VTYTTLIHGFFQAREC 447
Query: 372 EEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGC 431
+ A +F +M GV PD +T+ LL ++G VE +F ++ +EP I Y
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR-SKMEPDIYTYNI 506
Query: 432 MVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD 488
M++ +A ++ ++ C + + PN V + T++ G E A+ + + E
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 489 P 489
P
Sbjct: 567 P 567
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 140/316 (44%), Gaps = 14/316 (4%)
Query: 221 NLTSWNVMLAGYTKAGELGLARRVFSEMPL----KDDVSWSTMIVGLAHNGSFDQAFGFF 276
NL ++++++ + + +L LA V ++M D V+ ++++ G H A
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
+++ G +P+ + ++ + + L M G +++ K
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 337 GNVAMAQLVFRNMSVGR---SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
G++ +A + + M G+ +V + +II L + + +AL LF EM+ G+RP+ +T+
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 394 ISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL---HKAYEFIC 450
SL+ + G + S M I P + + ++D + + +L K Y+ +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 451 QMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD--PNNSGDHVLLSNVYAVAGKW 508
+ I P+ + +L+ +H ++ A+ + + D PN + L+ + A +
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG-FCKAKRV 412
Query: 509 KDVVSIRRTMTEQSMV 524
+ + + R M+++ +V
Sbjct: 413 DEGMELFREMSQRGLV 428
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 119/297 (40%), Gaps = 24/297 (8%)
Query: 206 DVAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEM----PLKDDVSWSTMIV 261
D +G R + ++ + L +L A +F +M P V +S ++
Sbjct: 41 DFSGVRYDYRKISINRLNDL-----------KLDDAVNLFGDMVKSRPFPSIVEFSKLLS 89
Query: 262 GLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLY 321
+A FD ++ GI N + + +++ + + M K G+
Sbjct: 90 AIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP 149
Query: 322 ISSVNNALIDTYSKCGNVAMA-QLVFRNMSVGRSIVSWT--SIIAGLAMHGHGEEALQLF 378
N+L++ + ++ A LV + + +G S+T ++I GL H EA+ L
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 379 HEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGR 438
M G +PD +T+ ++ G ++ + KM+ IEP + Y ++D
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ-GKIEPGVVIYNTIIDALCN 268
Query: 439 AARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELVKARLAE--MDPN 490
++ A +M I PN V + +L+ +G A + + + E ++PN
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 164/384 (42%), Gaps = 59/384 (15%)
Query: 118 HPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSE 177
H P F L AN + + +G ++ T LI + C
Sbjct: 64 HSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLS 123
Query: 178 SARRVFDEMP----EPNVVTWNAAVTA-CF--RCGDVAGARGVF---GRMPVRNLTSWNV 227
A V +M EP++VT+ + + C R GD + G P N+ +N
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP--NVVVYNT 181
Query: 228 MLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREG 283
++ G K GEL +A + +EM K D V+++T++ GL ++G + A R++++
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 284 IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQ 343
I P+ V+ T ALID + K GN+ AQ
Sbjct: 242 INPDVVTFT-----------------------------------ALIDVFVKQGNLDEAQ 266
Query: 344 LVFRNM---SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
+++ M SV + V++ SII GL MHG +A + F M G P+ +T+ +L+
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 401 SHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PISPN 457
+V++G ++F +M + G I Y ++ Y + +L A + C M ++P+
Sbjct: 327 CKFRMVDEGMKLFQRM-SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 458 AVIWRTLLGACSIHGNIELAELVK 481
+ LL ++G IE A LVK
Sbjct: 386 IITHCILLHGLCVNGEIESA-LVK 408
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 133/314 (42%), Gaps = 17/314 (5%)
Query: 188 EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYTKAGELGLARR 243
EPNVV +N + + G++ A + M + L ++N +L G +G A R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 244 VFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACA 299
+ +M + D V+++ +I G+ D+A ++E+++ + PN V+ +++
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 300 QAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV---GRSIV 356
G K M G N LI + K V +F+ MS I
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM 416
++ ++I G G AL +F M V PD IT LL+ +G +E F M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 417 KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTL-LGACSIHG 472
+ I Y M+ +A ++ KA+E C++P + P+A + + LG C
Sbjct: 413 RESEKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471
Query: 473 NIELAELVKARLAE 486
E EL++ R+ E
Sbjct: 472 RREADELIR-RMKE 484
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 157/402 (39%), Gaps = 53/402 (13%)
Query: 33 KCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLL-HCAVT-ISDALHYALRLFQHFPNPDTF 90
+CS L + + G + FG LL C V I DA + + + P+
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 91 MYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQ 150
+YNTLI +M + + D ++ L G+ G ++
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKG-LGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 151 AFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM----PEPNVVTWNAAVTACFRCGD 206
+ + V T LI ++ + G+ + A+ ++ EM +PN VT+N+ + G
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 207 VAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWST 258
+ A+ F M + N+ ++N +++G+ K + ++F M + D +++T
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 259 MIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSG 318
+I G G A F ++ + P+ +++ C +LHG
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPD------IITHCI---------LLHGL----- 396
Query: 319 FLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRS---IVSWTSIIAGLAMHGHGEEAL 375
VN G + A + F +M IV++ +I GL E+A
Sbjct: 397 -----CVN----------GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441
Query: 376 QLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
+LF + GV+PD T+ ++ +G + E+ +MK
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 13/178 (7%)
Query: 354 SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIF 413
SIV +T ++ A E + +ME G+ D +F L++ + +
Sbjct: 70 SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129
Query: 414 SKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPIS---PNAVIWRTLLGACSI 470
KM L G EP+I +G ++ + R+ A+ + M S PN V++ TL+
Sbjct: 130 GKMMKL-GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 471 HGNIELA-ELVKARLAEMDPNNSGDHVLLSNV----YAVAGKWKDVVSIRRTMTEQSM 523
+G + +A EL L EM+ G V+ N +G+W D + R M ++S+
Sbjct: 189 NGELNIALEL----LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 168/378 (44%), Gaps = 19/378 (5%)
Query: 127 SFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARR----V 182
+F L+ + G +K +L + + G ++F I + G+ + A R +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 183 FDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLT----SWNVMLAGYTKAGEL 238
++ P+P+V+T+N + + A G+M L ++N ++AGY K G +
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 239 GLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGV 294
LA R+ + D ++ ++I GL H G ++A F E L +GI+PN + +
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 295 LSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQ-LVFRNMSVGR 353
+ + G L M + G + N L++ K G V+ A LV +S G
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 354 --SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE 411
I ++ +I G + E AL++ M ++GV PD T+ SLL + E E
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 412 IFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGAC 468
+ M G P + + +++ R +L +A + +M ++P+AV + TL+
Sbjct: 518 TYKTMVE-KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 469 SIHGNIELAELVKARLAE 486
+G+++ A + ++ E
Sbjct: 577 CKNGDLDGAYTLFRKMEE 594
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 162/413 (39%), Gaps = 48/413 (11%)
Query: 80 LFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGG 139
L + P PD YN LI ++ + + PDS+++ + G GG
Sbjct: 277 LIEQGPKPDVITYNNLI-YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 140 SLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM----PEPNVVTWN 195
++ ++ A +GF F +LI G++ A +F+E +PNV+ +N
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 196 AAVTACFRCGDVAGARGVFGRMPVRNLT----SWNVMLAGYTKAGEL----GLARRVFSE 247
+ G + A + M + L ++N+++ G K G + GL + + S+
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 248 MPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFG 307
D +++ +I G + + A +L G+ P+ + +
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT---------------YN 500
Query: 308 KILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIVSWTSIIAGLAM 367
+L+G + S F +++TY A +F ++ ++ L
Sbjct: 501 SLLNGLCKTSKF-------EDVMETYKTMVEKGCAPNLF----------TFNILLESLCR 543
Query: 368 HGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIE 427
+ +EAL L EM+ V PD +TF +L+ +G ++ +F KM+ Y + +
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP 603
Query: 428 HYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELA 477
Y ++ + + A + +M + P+ +R ++ GN+ L
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 166/395 (42%), Gaps = 27/395 (6%)
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
PD++ YNTLI + PD F++ + G+ + G
Sbjct: 319 PDSYTYNTLI-AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACF 202
L +A G +V + TLI G A ++ +EM E P V T+N V
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 203 RCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEM---PLKDDV- 254
+ G V+ A G+ M + ++ ++N+++ GY+ ++ A + M + DV
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL-SACAQAGASEFGKILHGF 313
++++++ GL F+ ++ ++ +G PN + +L S C E +L
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 314 MEKSGFLYISSVN-NALIDTYSKCGNVAMAQLVFRNM----SVGRSIVSWTSIIAGLAMH 368
KS + +V LID + K G++ A +FR M V S ++ II
Sbjct: 558 KNKS--VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEK 615
Query: 369 GHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCE-IFSKMKNLYGIEPTIE 427
+ A +LF EM + + PDG T+ ++ +G V G + + M+N G P++
Sbjct: 616 LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN--GFIPSLT 673
Query: 428 HYGCMVDLYGRAARLHKAYEFI---CQMPISPNAV 459
G +++ R+++A I Q + P AV
Sbjct: 674 TLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 91/462 (19%), Positives = 182/462 (39%), Gaps = 96/462 (20%)
Query: 153 RHGFDTHVFVGTTLISM--YGECGDSESARRVFDEMP----EPNVVTWNAAVTACFRCGD 206
R H+ G + +M YG G + A VF+ M EP V ++NA ++ G
Sbjct: 67 RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGY 126
Query: 207 VAGARGVFGRMPVRNLT----SWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWST 258
A V+ RM R +T S+ + + + K A R+ + M + + V++ T
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 259 MIVG-----------------------------------LAHNGSFDQAFGFFRELLREG 283
++ G L G + ++++ G
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246
Query: 284 IRPNEVSLTGVLSACAQAGASE--------------------FGKILHGFMEKSGF---- 319
+ PN + + Q G + + +++G + S F
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 320 LYI-----------SSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI---VSWTSIIAGL 365
+Y+ S N LI Y K G V +A+ + + + ++ S+I GL
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 366 AMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPT 425
G AL LF+E G++P+ I + +L+ S+ G++ + ++ ++M G+ P
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE-KGLIPE 425
Query: 426 IEHYGCMVDLYGRAARLHKAYEFICQMPIS----PNAVIWRTLLGACSIHGNIELA-ELV 480
++ + +V+ + + A + + ++ IS P+ + L+ S +E A E++
Sbjct: 426 VQTFNILVNGLCKMGCVSDA-DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484
Query: 481 KARLAE-MDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ 521
L +DP+ + LL+ + + K++DV+ +TM E+
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTS-KFEDVMETYKTMVEK 525
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 170/376 (45%), Gaps = 22/376 (5%)
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
D +Y+T+I + F +M + + PD F+++ + + N G ++L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMD-NKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACFR 203
+ +V +LI + + G A ++FDEM +PN+VT+N+ +
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 204 CGDVAGARGVFGRMPVRN----LTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVS 255
+ A+ +F M ++ + ++N ++ G+ KA ++ +F +M + + V+
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
++T+I G D A F++++ +G+ PN ++ +L + G E ++ +++
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 316 KSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGE 372
KS N + + K G V +F ++S V ++++ ++I+G G E
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN--LYGIEPTIEHYG 430
EA LF +M+E G PD T+ +L+ A G E+ +M++ G T YG
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST---YG 594
Query: 431 CMVDLYGRAARLHKAY 446
+ D+ RL K +
Sbjct: 595 LVTDML-HDGRLDKGF 609
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 57/347 (16%)
Query: 155 GFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACFRCGDVAGA 210
G VF ++LIS G A R+ +M E PNVVT+N+ + A + G + A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 211 RGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMP----LKDDVSWSTMIVG 262
+F M R N+ ++N ++ G+ L A+++F+ M L D V+++T+I G
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
FR++ R G+ N V+ T ++HGF + S
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYT---------------TLIHGFFQAS----- 429
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
C N AQ+VF+ M V +I+++ +++ GL +G E+A+ +F
Sbjct: 430 ------------DCDN---AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRA 439
+++S + PD T+ + +G VE G ++F + +L G++P + Y M+ + +
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIAYNTMISGFCKK 533
Query: 440 ARLHKAYEFICQM----PISPNAVIWRTLLGACSIHGN-IELAELVK 481
+AY +M P+ P++ + TL+ A G+ AEL+K
Sbjct: 534 GLKEEAYTLFIKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIK 579
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 161/369 (43%), Gaps = 24/369 (6%)
Query: 177 ESARRVFDEM----PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV----RNLTSWNVM 228
+ A +F EM P P++V ++ ++A + +M + NL ++N+M
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 229 LAGYTKAGELGLARRVFSEMPLK-----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREG 283
+ + +L A + +M +K V+ ++++ G H +A +++ G
Sbjct: 107 INCLCRRSQLSFALAILGKM-MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 284 IRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQ 343
+P+ V+ T ++ Q + L M G A+I+ K G +A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 344 LVFRNMSVGR---SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYAC 400
+ M G+ +V ++++I L + H ++AL LF EM+ G+RPD T+ SL+
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 401 SHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL---HKAYEFICQMPISPN 457
+ G + S M I P + + ++D + + +L K ++ + Q I PN
Sbjct: 286 CNYGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 458 AVIWRTLLGACSIHGNIELAELVKARLAEMD--PNNSGDHVLLSNVYAVAGKWKDVVSIR 515
V + +L+ +H ++ A+ + + D P+ + L+ N + A K D + +
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI-NGFCKAKKVVDGMELF 403
Query: 516 RTMTEQSMV 524
R M+ + +V
Sbjct: 404 RDMSRRGLV 412
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 163/387 (42%), Gaps = 61/387 (15%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD+ F L G+ + +L + G + TL++ G A +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 183 FDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNL----TSWNVMLAGYTK 234
D M E PN VT+ + + G A A + +M RN+ +++++ G K
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
G L A +F+EM +K D ++++T+I G + G +D R++++ I PN V+
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 291 LTGVLSACAQAGA-SEFGKILHGFMEK-------------SGF--------------LYI 322
+ ++ + + G E ++L M++ GF L I
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 323 SS-------VNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGE 372
S N LI+ Y K + +FR MS V + V++ +++ G G E
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIF-----SKMKNLYGIEPTIE 427
A +LF EM VRPD +++ LL +G +E+ EIF SKM+ GI I
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 428 HYGCMVDLYGRAARLHKAYEFICQMPI 454
H C A+++ A++ C +P+
Sbjct: 516 HGMC------NASKVDDAWDLFCSLPL 536
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 130/310 (41%), Gaps = 15/310 (4%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D ++ + G N G G +L + +V + LI + + G A ++
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 184 DEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKA 235
EM + PN +T+N+ + + + A + M + ++ ++N+++ GY KA
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 236 GELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
+ +F EM L+ + V+++T++ G +G + A F+E++ +RP+ VS
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 292 TGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM-- 349
+L G E + G +EKS + +I V A +F ++
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 350 -SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQ 408
V ++ +I+ L +A LF +M E G PD +T+ L+ A
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATT 596
Query: 409 GCEIFSKMKN 418
E+ +MK+
Sbjct: 597 AAELIEEMKS 606
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 174/422 (41%), Gaps = 31/422 (7%)
Query: 70 ISDALHYALRLFQHFP-NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSF 128
+ DAL R+ F NPD YNT+++ + M+++ V P+ ++
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLV-PNRVTY 278
Query: 129 AFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP- 187
+ G GSLK Q+ + + LI+ G + D M
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 188 ---EPNVVTWNAAVTACFRCGDVAGARGVFGRMP----VRNLTSWNVMLAGYTKAGELGL 240
+P+VVT+N + CF G AR + +M N + N+ L K +
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 241 ARRVFSEM-------PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTG 293
R E+ P D V++ T+I G A RE+ ++GI+ N ++L
Sbjct: 399 VTRKVKELVDMHGFSP--DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 294 VLSA-CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS-- 350
+L A C + E +L+ K GF+ LI + + V A ++ M
Sbjct: 457 ILDALCKERKLDEAHNLLNS-AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 351 -VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQG 409
+ ++ ++ S+I GL HG E A++ F E+ ESG+ PD TF S++ G VE+
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575
Query: 410 CEIFSKMKNLYGIEPTIEHYGCMVDLYG--RAARLHKAYEFICQM--PISPNAVIWRTLL 465
E +++ + +P ++Y C + L G + KA F + + V + T++
Sbjct: 576 FEFYNESIK-HSFKP--DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMI 632
Query: 466 GA 467
A
Sbjct: 633 SA 634
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/396 (19%), Positives = 141/396 (35%), Gaps = 87/396 (21%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYG 171
+++ + V PD ++ + G+ N GS++ G +L V TLI
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356
Query: 172 ECGDSESARRVFDEMPE----------------------------------------PNV 191
E G S AR++ ++M P++
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDI 416
Query: 192 VTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSE 247
VT++ + A + GD++GA + M + N + N +L K +L A + +
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNS 476
Query: 248 MPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGA 303
+ D+V++ T+I+G ++A + E+ + I P + ++ G
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536
Query: 304 SEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI-------- 355
+E + +SG L S N++I Y K G V A F N S+ S
Sbjct: 537 TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA-FEFYNESIKHSFKPDNYTCN 595
Query: 356 ------------------------------VSWTSIIAGLAMHGHGEEALQLFHEMEESG 385
V++ ++I+ +EA L EMEE G
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Query: 386 VRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYG 421
+ PD T+ S + G + + E+ K +G
Sbjct: 656 LEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 60/428 (14%)
Query: 75 HYALRLFQHFP----NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAF 130
H AL++FQ P+ NTL+ I + R+P+ SFS +
Sbjct: 148 HVALQIFQKMIRLKLKPNLLTCNTLL----------------IGLVRYPS----SFSISS 187
Query: 131 ALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP--- 187
A + + +K G L+ Q F L++ Y G E A + + M
Sbjct: 188 AREVFDD--MVKIGVSLNVQTF-----------NVLVNGYCLEGKLEDALGMLERMVSEF 234
Query: 188 --EPNVVTWNAAVTACFRCGDVAGARGVFGRMP----VRNLTSWNVMLAGYTKAGELGLA 241
P+ VT+N + A + G ++ + + M V N ++N ++ GY K G L A
Sbjct: 235 KVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA 294
Query: 242 RRVFSEMP----LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
++ M L D +++ +I GL + GS + + ++P+ V+ ++
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM----SVGR 353
C + G S + L ME G +N + K + +
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414
Query: 354 SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA-CSHSGLVEQGCEI 412
IV++ ++I G AL++ EM + G++ + IT ++L A C L E +
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 413 FSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACS 469
S K + ++ YG ++ + R ++ KA E +M I+P + +L+G
Sbjct: 475 NSAHKRGFIVDEVT--YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 470 IHGNIELA 477
HG ELA
Sbjct: 533 HHGKTELA 540
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 151/350 (43%), Gaps = 20/350 (5%)
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P T+ +N LIR F +M P+ F+F ++G G G +
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCK-PNEFTFGILVRGYCKAGLTDKGLE 203
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACF 202
L G + + T++S + G ++ + ++ ++M E P++VT+N+ ++A
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 203 RCGDVAGARGVFGRM--------PVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLKDDV 254
+ G V A +F M P N ++N+ML G+ K G L A+ +F + DD+
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 255 ----SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKIL 310
S++ + GL +G F +A +++ +GI P+ S ++ + G K +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 311 HGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI---VSWTSIIAGLAM 367
G M+++G + L+ Y G V A+ + + M + + ++ L
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 368 HGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
G EA +L +M E G D +T ++ SG +++ EI M+
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 152/409 (37%), Gaps = 80/409 (19%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P +S+ + G+ G L + R+G L+ Y G ++A+ +
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 183 FDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTK 234
EM PN T N + + ++ G ++ A + +M + + + N+++ G
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 235 AGELGLARRVFSEMP---------------------------LKDDVSWSTMIVGLAHNG 267
+GEL A + M L D +++ST++ GL G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 268 SFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNN 327
F +A F E++ E ++P+ V+ N
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAY-----------------------------------N 563
Query: 328 ALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEES 384
I + K G ++ A V ++M +S+ ++ S+I GL + E L EM+E
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 385 GVRPDGITFISLLYACSHSGLVEQGCEIFSKM------KNLYGIEPTIEHYGCMVDLYGR 438
G+ P+ T+ + + VE + +M N++ + IE + C V +
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF-CKVPDFDM 682
Query: 439 AARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEM 487
A + + IC ++++ LL A + EL E V R E+
Sbjct: 683 AQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 172/391 (43%), Gaps = 22/391 (5%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD+ +F +KG+ G + L + +G V ++++ GD+ A +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 183 FDEMPEPNV----VTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS----WNVMLAGYTK 234
+M E NV T++ + + R G + A +F M + + S +N ++ G K
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 235 AGELG----LARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
AG+ L + + S + + ++++ ++ G +A ++E++ GI PN ++
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 291 LTGVLSA-CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM 349
++ C Q SE +L + I + +LI Y V VFRN+
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT-SLIKGYCMVKRVDDGMKVFRNI 394
Query: 350 S---VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLV 406
S + + V+++ ++ G G + A +LF EM GV PD +T+ LL +G +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 407 EQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRT 463
E+ EIF ++ ++ I Y +++ + ++ A+ C +P + PN + +
Sbjct: 455 EKALEIFEDLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 464 LLGACSIHGNIELAELVKARLAEMDPNNSGD 494
++ G++ A ++ ++ E D N D
Sbjct: 514 MISGLCKKGSLSEANILLRKMEE-DGNAPND 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/399 (18%), Positives = 148/399 (37%), Gaps = 51/399 (12%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
+S+A+ R+ ++ PD YN+++ +M V D F+++
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYS 232
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE- 188
+ + G + L + G + V +L+ + G + +M
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA 241
PNV+T+N + + G + A ++ M R N+ ++N ++ GY L A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
+ M D V+++++I G D FR + + G+ N V+ + ++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS------- 350
Q+G + + L M G L L+D G + A +F ++
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 351 -------------------------------VGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
V +++++T +I+GL G EA L
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
+MEE G P+ T+ +L+ A G + ++ +MK+
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 9/265 (3%)
Query: 234 KAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTG 293
K + L + + PL V +S +A F+ F ++L GI N +L
Sbjct: 69 KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 294 VLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---S 350
+++ + + F + G + K G+ ++ N LI G V+ A ++ M
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 351 VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGC 410
+V++ SI+ G+ G AL L +MEE V+ D T+ +++ + G ++
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 411 EIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PISPNAVIWRTLLGA 467
+F +M+ GI+ ++ Y +V +A + + + M I PN + + LL
Sbjct: 249 SLFKEMET-KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 468 CSIHGNIELA-ELVKARLAE-MDPN 490
G ++ A EL K + + PN
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPN 332
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 112/282 (39%), Gaps = 48/282 (17%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
+ P+ +F L G L+ +L+ + G ++ TL+ Y A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 181 RVFDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGY 232
+ D M P++VT+ + + V VF + R N ++++++ G+
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 233 TKAGELGLARRVFSEMP----LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLR------- 281
++G++ LA +F EM L D +++ ++ GL NG ++A F +L +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 282 ----------------------------EGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
+G++PN ++ T ++S + G+ IL
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNV-AMAQLVFRNMSVGRS 354
ME+ G N LI + + G++ A A+L+ S G S
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 164/402 (40%), Gaps = 57/402 (14%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P + + L G +G + L Q G+ TTLI + A +
Sbjct: 78 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 137
Query: 183 FDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS----WNVMLAGYTK 234
D M + PN+VT+ V + GD+ A + +M + + +N ++ K
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
+ A +F EM K + V++S++I L G + A +++ + I PN V+
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSG-----FLYISSVN------------------- 326
++ A + G + LH M K F Y S +N
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 327 -----------NALIDTYSKCGNVAMAQLVFRNMS----VGRSIVSWTSIIAGLAMHGHG 371
N LI + K V +FR MS VG + V++T++I GL G
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT-VTYTTLIQGLFHDGDC 376
Query: 372 EEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGC 431
+ A ++F +M GV PD +T+ LL ++G +E+ E+F M+ I+ I Y
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK-SEIKLDIYIYTT 435
Query: 432 MVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLL-GACS 469
M++ +A ++ ++ C + + PN V + T++ G CS
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 181/417 (43%), Gaps = 22/417 (5%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
ISDA+ ++ + PDT + TLI +M + P+ ++
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ-PNLVTYG 154
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP-- 187
+ G+ G + L + + V + T+I + + A +F EM
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 188 --EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA 241
PNVVT+++ ++ G + A + M + NL ++N ++ + K G+ A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
++ +M + D +++++I G + D+A F ++ + P+ + ++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRS 354
++ E G L M G + + LI G+ AQ VF+ M V
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
I++++ ++ GL +G E+AL++F M++S ++ D + +++ +G V+ G ++F
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 415 KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM----PISPNAVIWRTLLGA 467
+ +L G++P + Y M+ L +AY + +M P+ P++ + TL+ A
Sbjct: 455 SL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRA 509
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 157/346 (45%), Gaps = 16/346 (4%)
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
D ++NT+I + F +M + P+ +++ + + + G +QL
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACFR 203
+ ++ LI + + G A ++ D+M +P++ T+N+ +
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 204 CGDVAGARGVFGRMPVRN----LTSWNVMLAGYTKAGELGLARRVFSEMP----LKDDVS 255
+ A+ +F M ++ L ++N ++ G+ K+ + +F EM + D V+
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
++T+I GL H+G D A F++++ +G+ P+ ++ + +L G E + +M+
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 316 KSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGE 372
KS + +I+ K G V +F ++S V ++V++ ++I+GL +
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
EA L +M+E G PD T+ +L+ A G E+ +M++
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 122/283 (43%), Gaps = 10/283 (3%)
Query: 249 PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGK 308
PL ++ ++ +A FD ++ R GI N + +++ +
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 309 ILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMA-QLVFRNMSVGR--SIVSWTSIIAGL 365
L G M K G+ ++L++ Y ++ A LV + + +G +++T++I GL
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 366 AMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPT 425
+H EA+ L M + G +P+ +T+ ++ G ++ + +KM+ IE
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA-AKIEAD 184
Query: 426 IEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELVKA 482
+ + ++D + + A +M I PN V + +L+ +G A + +
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 483 RLAE--MDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSM 523
+ E ++PN + L+ + + GK+ + + M ++S+
Sbjct: 245 DMIEKKINPNLVTFNALI-DAFVKEGKFVEAEKLHDDMIKRSI 286
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 169/401 (42%), Gaps = 19/401 (4%)
Query: 31 LSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLH-CAVTISDALHYALRLFQHFPNPDT 89
L K + ++ + + G + +G L+ C + DA A LF P P+
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDA---AKDLFYRIPKPEI 353
Query: 90 FMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHC 149
++NTLI M + PD ++ + G G + ++
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACFRCG 205
G +V+ T L+ + + G + A V +EM +PN V +N ++A +
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 206 DVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGE----LGLARRVFSEMPLKDDVSWS 257
+ A +F MP + ++ ++N +++G + E L L R + SE + + V+++
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 258 TMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKS 317
T+I G +A E++ +G +E++ ++ +AG + + L M +
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 318 GFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRS---IVSWTSIIAGLAMHGHGEEA 374
G + N LI+ + G V A + M + S IV++ S+I GL G E+
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 375 LQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
L +F +++ G+ PD +TF +L+ G V C + +
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 176/456 (38%), Gaps = 27/456 (5%)
Query: 31 LSKCSSLKPTKQIHTHLYVTGLHTHPLFFGKLLLH-CAVT-ISDALHYALRLFQHFPNPD 88
LSKC+ + Q+ +++ G F ++L C I++A R+ PD
Sbjct: 262 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 321
Query: 89 TFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ-L 147
Y L+ F ++ + P+ F + G G L L
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACFR 203
+G V +LI Y + G A V +M +PNV ++ V +
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 204 CGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVS 255
G + A V M N +N +++ + K + A +F EMP K D +
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
++++I GL A R+++ EG+ N V+ +++A + G + + L M
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 316 KSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGE 372
G N+LI + G V A+ +F M S +S +I GL G E
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCM 432
EA++ EM G PD +TF SL+ +G +E G +F K++ GI P + +
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ-AEGIPPDTVTFNTL 675
Query: 433 VDLYGRAARLHKAYEFI---CQMPISPNAVIWRTLL 465
+ + ++ A + + PN W LL
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/415 (19%), Positives = 169/415 (40%), Gaps = 21/415 (5%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P F+F +K + L +HG + + TLI +C A ++
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 183 FDEM----PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLT----SWNVMLAGYTK 234
+EM P+ T+N + + + A + RM +R ++ ++ G K
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 235 AGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLRE-GIRPNEVSLTG 293
G + A+ +F +P + V ++T+I G +G D A +++ GI P+ +
Sbjct: 335 IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 294 VLSACAQAGASEFG-KILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS-- 350
++ + G ++LH K + S L+D + K G + A V MS
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY-TILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 351 -VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQG 409
+ + V + +I+ EA+++F EM G +PD TF SL+ ++
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 410 CEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPI--SP-NAVIWRTLLG 466
+ M + G+ Y +++ + R + +A + + +M SP + + + +L+
Sbjct: 514 LWLLRDMIS-EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 467 ACSIHGNIELAELVKARLAE--MDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMT 519
G ++ A + ++ P+N ++L+ N +G ++ V ++ M
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI-NGLCRSGMVEEAVEFQKEMV 626
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 100/488 (20%), Positives = 201/488 (41%), Gaps = 50/488 (10%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQ-----AFRHGFDTHVFVGTTL 166
IQM+ VF +S F ++ G T+L + + F ++ V L
Sbjct: 134 LIQMKDEGIVFKESL-FISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 167 ISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMP---- 218
+S G C + A VF +M P + T+ + A ++ A + M
Sbjct: 193 VS--GNC--HKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGC 248
Query: 219 VRNLTSWNVMLAGYTKAGELGLARRVFSEMPL----KDDVSWSTMIVGLAHNGSFDQAFG 274
V N + ++ +K + A ++ EM L D +++ +I+GL ++A
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK 308
Query: 275 FFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYS 334
+L G P++++ +++ + G + K L + K + + N LI +
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV----IFNTLIHGFV 364
Query: 335 KCGNVAMAQLVFRNMSVGRSIV----SWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDG 390
G + A+ V +M IV ++ S+I G G AL++ H+M G +P+
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 391 ITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFIC 450
++ L+ G +++ + ++M + G++P + C++ + + R+ +A E
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEM-SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 451 QMP---ISPNAVIWRTLL-GACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAG 506
+MP P+ + +L+ G C + L++ ++E N+ + L N + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 507 KWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFV-AGEKPNEVTEEAHDKLREIMLRL 565
+ K+ R+ + E +P I N ++ G AGE DK R + ++
Sbjct: 544 EIKEA---RKLVNEMVFQGSP-LDEITYNSLIKGLCRAGEV---------DKARSLFEKM 590
Query: 566 RAEAGYAP 573
+ G+AP
Sbjct: 591 LRD-GHAP 597
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 156/397 (39%), Gaps = 38/397 (9%)
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAG 209
+RH FD + LI G G+ ++ R+ +M + +V + + R D AG
Sbjct: 105 NGYRHSFDVY----QVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAG 160
Query: 210 ARGVFGRM--PVRNL-------TSWNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMI 260
G R+ +RN+ S+NV+L +A VF +M L + +
Sbjct: 161 FPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM-LSRKIPPTLFT 219
Query: 261 VGLAHNG-----SFDQAFGFFRELLREGIRPNEV---SLTGVLSACAQAGASEFGKILHG 312
G+ D A R++ + G PN V +L LS C + +E ++L
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV--NEALQLLEE 277
Query: 313 FMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSV---GRSIVSWTSIIAGLAMHG 369
M G + + N +I K + A + M + +++ ++ GL G
Sbjct: 278 -MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG 336
Query: 370 HGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHY 429
+ A LF+ + +P+ + F +L++ G ++ + S M YGI P + Y
Sbjct: 337 RVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 430 GCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELVKARLAE 486
++ Y + + A E + M PN + L+ G I+ A V ++
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 487 --MDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQ 521
+ PN G + L+S + + + V I R M +
Sbjct: 453 DGLKPNTVGFNCLIS-AFCKEHRIPEAVEIFREMPRK 488
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 162/382 (42%), Gaps = 22/382 (5%)
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGT 145
+P+ Y+T I F M+R + P+ +F + G G L+
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD-ALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTAC 201
L+ + R +V T LI + + G+ + A ++ M E PN + + +
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
Query: 202 FRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMP----LKDD 253
F+ GD A +M + ++T++ V+++G G+L A + +M + D
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
V ++TM+ +G A + +L+ G P+ V+L+ ++ A+ G +
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI 398
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSI---VSWTSIIAGLAMHGH 370
+ + +Y LID K G+ + +F +S + +TS IAGL G+
Sbjct: 399 EKANDVMY-----TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453
Query: 371 GEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYG 430
+A +L M + G+ D + + +L+Y + GL+ + ++F +M N GI P +
Sbjct: 454 LVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLN-SGISPDSAVFD 512
Query: 431 CMVDLYGRAARLHKAYEFICQM 452
++ Y + + A + + M
Sbjct: 513 LLIRAYEKEGNMAAASDLLLDM 534
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 172/430 (40%), Gaps = 61/430 (14%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYG 171
F+ R + PD F+ + + N + G+ H +++S
Sbjct: 8 FLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVC 67
Query: 172 ECGDSESARRVFDEMP----EPNVVTWNAAVTACFRCGDVAGA-------RGVFGRMPVR 220
+ G + A + MP EP+V+++N+ + R GD+ A R G +
Sbjct: 68 KLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKP 127
Query: 221 NLTSWNVMLAGYTKAGELGLARRVFSEMPL------KDDVSWSTMIVGLAHNGSFDQAFG 274
++ S+N + G++K + + VF M + + V++ST I +G A
Sbjct: 128 DIVSFNSLFNGFSK---MKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 275 FFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYS 334
F + R+ + PN V+ T ++ +AG E L+ M + ALID +
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 335 KCGNVAMAQLVFRNMSVGR--------------------------------------SIV 356
K G + A+ ++ M R I
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 357 SWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKM 416
++ II+GL +G +EA ++ +ME+S + PD + F +++ A SG ++ ++ K+
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
Query: 417 KNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHGNIEL 476
G EP + M+D + +LH+A + C N V++ L+ A G+
Sbjct: 365 IE-RGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK--ANDVMYTVLIDALCKEGDFIE 421
Query: 477 AELVKARLAE 486
E + ++++E
Sbjct: 422 VERLFSKISE 431
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 170/417 (40%), Gaps = 55/417 (13%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
ISDA+ ++ + PDTF + TLI QM + PD ++
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ-PDLVTYG 227
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP-- 187
+ G+ G + L + +V + T+I + E A +F EM
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 188 --EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA 241
PNVVT+N+ + G + A + M + N+ ++N ++ + K G+L A
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
++ EM + D ++++ +I G + D+A F+ ++ + PN
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN---------- 397
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS----VGR 353
N LI+ + KC V +FR MS VG
Sbjct: 398 -------------------------IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 354 SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIF 413
+ V++T+II G G + A +F +M + V D +T+ LL+ G ++ IF
Sbjct: 433 T-VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 414 SKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPISPNAVIWRTLL-GACS 469
++ +E I Y M++ +A ++ +A++ C + I P+ V + T++ G CS
Sbjct: 492 KYLQK-SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCS 547
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 167/373 (44%), Gaps = 32/373 (8%)
Query: 177 ESARRVFDEM----PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPV----RNLTSWNVM 228
+ A +F +M P P++V +N ++A + + +M +L ++++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 229 LAGYTKAGELGLARRVFSEMPLK-----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREG 283
+ + + +L LA V ++M +K D V+ S+++ G H+ A +++ G
Sbjct: 125 INCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 284 IRPNEVSLTGVLSAC-AQAGASEFGKILHGFMEKS---GFLYISSVNNALIDTYSKCGNV 339
+P+ + T ++ ASE ++ +++ + +V N L K G++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL----CKRGDI 239
Query: 340 AMAQLVFRNMSVGR---SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISL 396
+A + M R ++V + +II L + H E A+ LF EME G+RP+ +T+ SL
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 397 LYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLY---GRAARLHKAYEFICQMP 453
+ + G + S M I P + + ++D + G+ K +E + Q
Sbjct: 300 INCLCNYGRWSDASRLLSNMLE-KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 454 ISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD--PNNSGDHVLLSNVYAVAGKWKDV 511
I P+ + + L+ +H ++ A+ + + D PN + L+ N + + +D
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI-NGFCKCKRVEDG 417
Query: 512 VSIRRTMTEQSMV 524
V + R M+++ +V
Sbjct: 418 VELFREMSQRGLV 430
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 182/417 (43%), Gaps = 22/417 (5%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
ISDA+ ++ + PDT + TLI +M + P+ ++
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ-PNLVTYG 229
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP-- 187
+ G+ G L + + V + T+I + + A +F EM
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 188 --EPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA 241
PNVVT+++ ++ G + A + M + NL ++N ++ + K G+ A
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
+++ +M + D ++++++ G + D+A F ++ + P+ V+ ++
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRS 354
++ E G L M G + + LI G+ AQ VF+ M V
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
I++++ ++ GL +G E+AL++F M++S ++ D + +++ +G V+ G ++F
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 415 KMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM----PISPNAVIWRTLLGA 467
+ +L G++P + Y M+ L +AY + +M P+ PN+ + TL+ A
Sbjct: 530 SL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRA 584
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 163/402 (40%), Gaps = 57/402 (14%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P + + L G +G + L Q G+ TTLI + A +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 183 FDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS----WNVMLAGYTK 234
D M + PN+VT+ V + GD A + +M + + +N ++ K
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
+ A +F EM K + V++S++I L G + A +++ + I PN V+
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSG-----FLYISSVN------------------- 326
++ A + G + L+ M K F Y S VN
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 327 -----------NALIDTYSKCGNVAMAQLVFRNMS----VGRSIVSWTSIIAGLAMHGHG 371
N LI + K V +FR MS VG + V++T++I GL G
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT-VTYTTLIQGLFHDGDC 451
Query: 372 EEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGC 431
+ A ++F +M GV PD +T+ LL ++G +E+ E+F M+ I+ I Y
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK-SEIKLDIYIYTT 510
Query: 432 MVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLL-GACS 469
M++ +A ++ ++ C + + PN V + T++ G CS
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 158/346 (45%), Gaps = 16/346 (4%)
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
D ++NT+I + F +M + P+ +++ + + + G +QL
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACFR 203
+ ++ LI + + G A +++D+M +P++ T+N+ V
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 204 CGDVAGARGVFGRMPVRN----LTSWNVMLAGYTKAGELGLARRVFSEMP----LKDDVS 255
+ A+ +F M ++ + ++N ++ G+ K+ + +F EM + D V+
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
++T+I GL H+G D A F++++ +G+ P+ ++ + +L G E + +M+
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 316 KSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGE 372
KS + +I+ K G V +F ++S V ++V++ ++I+GL +
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKN 418
EA L +M+E G P+ T+ +L+ A G E+ +M++
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 135/291 (46%), Gaps = 16/291 (5%)
Query: 193 TWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEM 248
T+N + R ++ A + G+M ++ + + +L GY + A + +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 249 P----LKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGAS 304
D ++++T+I GL + +A +++ G +PN V+ V++ + G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 305 EFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSI 361
+ L ME + + N +ID+ K +V A +F+ M + ++V+++S+
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYG 421
I+ L +G +A QL +M E + P+ +TF +L+ A G + +++ M
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK-RS 360
Query: 422 IEPTIEHYGCMVDLYGRAARLHKA---YEFICQMPISPNAVIWRTLL-GAC 468
I+P I Y +V+ + RL KA +EF+ P+ V + TL+ G C
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 133/306 (43%), Gaps = 15/306 (4%)
Query: 187 PEPNVVTWNAAVTACFRCG--DVAGARG-VFGRMP-VRNLTSWNVMLAGYTKAGELGLAR 242
P P++V +N ++A + DV + G R+ V L ++N+++ + + ++ LA
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 243 RVFSEMPL----KDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC 298
+ +M V+ S+++ G H A +++ G RP+ ++ T ++
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 299 AQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGR---SI 355
+ L M + G +++ K G+ +A + M + +
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
V + +II L + H ++AL LF EME G+RP+ +T+ SL+ G ++ S
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 416 MKNLYGIEPTIEHYGCMVDLY---GRAARLHKAYEFICQMPISPNAVIWRTLLGACSIHG 472
M I P + + ++D + G+ K Y+ + + I P+ + +L+ +H
Sbjct: 321 MIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 473 NIELAE 478
++ A+
Sbjct: 380 RLDKAK 385
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 131/302 (43%), Gaps = 12/302 (3%)
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
H+ D A G F +++ P+ V +LSA A+ + L M++ ++
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 325 VNNALIDTYSKCGNVAMA-QLVFRNMSVGR--SIVSWTSIIAGLAMHGHGEEALQLFHEM 381
N LI+ + + +++A L+ + M +G SIV+ +S++ G +A+ L +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR 441
E G RPD ITF +L++ + + +M G +P + YG +V+ +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGD 240
Query: 442 LHKAYEFICQM---PISPNAVIWRTLLGACSIHGNIELA-ELVKARLAEMDPNNSGDHVL 497
A + +M I + VI+ T++ + + +++ A L K + N +
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 498 LSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHDK 557
L + G+W D + M E+ + P +++ N ++ FV K E + D
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKI--NP--NLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 558 LR 559
++
Sbjct: 357 IK 358
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 159/382 (41%), Gaps = 17/382 (4%)
Query: 86 NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGT 145
+PD YNT++R +M + +PD ++ ++ +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAM 259
Query: 146 QLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTAC 201
+L + G V L++ + G + A + ++MP +PNV+T N + +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 202 FRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPL----KDD 253
G A + M + ++ ++N+++ + G LG A + +MP +
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 254 VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGF 313
+S++ ++ G D+A + ++ G P+ V+ +L+A + G E +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 314 MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGH 370
+ G + N +ID +K G A + M + ++++S++ GL+ G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 371 GEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYG 430
+EA++ FHE E G+RP+ +TF S++ S ++ + M N G +P Y
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN-RGCKPNETSYT 558
Query: 431 CMVDLYGRAARLHKAYEFICQM 452
+++ +A E + ++
Sbjct: 559 ILIEGLAYEGMAKEALELLNEL 580
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 132/301 (43%), Gaps = 14/301 (4%)
Query: 189 PNVVTWNAAVTACFRCGDVAGARGVF----GRMPVRNLTSWNVMLAGYTKAGELGLARRV 244
P+++ + R G A + G V ++ ++NVM++GY KAGE+ A V
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 245 FSEMPLKDD-VSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA-CAQAG 302
M + D V+++T++ L +G QA +L+ P+ ++ T ++ A C +G
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 303 ASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWT 359
K+L M G N L++ K G + A +M ++++
Sbjct: 255 VGHAMKLLDE-MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 360 SIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNL 419
I+ + G +A +L +M G P +TF L+ GL+ + +I KM
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ- 372
Query: 420 YGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PISPNAVIWRTLLGACSIHGNIEL 476
+G +P Y ++ + + ++ +A E++ +M P+ V + T+L A G +E
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 477 A 477
A
Sbjct: 433 A 433
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 55/332 (16%)
Query: 74 LHYALRLFQHFPN----PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
L A++ P+ P+ +N ++R M R P +F
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFN 348
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR------RVF 183
+ + G L + + +HG + L ++G C + + R R+
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL--LHGFCKEKKMDRAIEYLERMV 406
Query: 184 DEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVRN----LTSWNVMLAGYTKAGELG 239
P++VT+N +TA + G V A + ++ + L ++N ++ G KAG+ G
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 240 LARRVFSEMPLKD----DVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
A ++ EM KD +++S+++ GL+ G D+A FF E R GIRPN V+
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT----- 521
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR-NMSVGRS 354
F I+ G + S+ + A+ LVF N +
Sbjct: 522 ----------FNSIMLGLCK------------------SRQTDRAIDFLVFMINRGCKPN 553
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGV 386
S+T +I GLA G +EAL+L +E+ G+
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 7/245 (2%)
Query: 225 WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGI 284
+ + +GY+ + G V S L +DV + + + G ++ F F ++ G
Sbjct: 75 FETLSSGYSNSNGNGHYSSVNSSFAL-EDVESNNHLRQMVRTGELEEGFKFLENMVYHGN 133
Query: 285 RPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQL 344
P+ + T ++ + G + + +E SG + N +I Y K G + A
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 345 VFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA-CSHS 403
V MSV +V++ +I+ L G ++A+++ M + PD IT+ L+ A C S
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 404 GLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMPIS---PNAVI 460
G V ++ +M++ G P + Y +V+ + RL +A +F+ MP S PN +
Sbjct: 254 G-VGHAMKLLDEMRD-RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 461 WRTLL 465
+L
Sbjct: 312 HNIIL 316
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 161/360 (44%), Gaps = 26/360 (7%)
Query: 150 QAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACFRCG 205
+ R +VF +I+ + G AR V ++M PNVV++N + + G
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 206 ---DVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLKDD----V 254
+ A V M NLT++N+++ G+ K L + +VF EM +D +
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM 314
S++++I GL + G +A +++ G++PN ++ +++ + + + G +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 315 EKSGFLYISSVNNALIDTYSKCGNV----AMAQLVFRNMSVGRSIVSWTSIIAGLAMHGH 370
+ G + + + N LID Y K G + A+ + + R + + ++ +IAGL +G+
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGN 451
Query: 371 GEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYG 430
E A +LF ++ G+ PD +TF L+ G + + +M + G++P Y
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKM-GLKPRHLTYN 509
Query: 431 CMVDLYGRAARLHKAYEFICQMP----ISPNAVIWRTLLGACSIHGNIELAELVKARLAE 486
++ Y + L A QM + N + LL S G +E A ++ + E
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 130/305 (42%), Gaps = 22/305 (7%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
V P+ +F + G +L ++ + +V +LI+ G A
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 181 RVFDEMP----EPNVVTWNAAVTACFRCGDVAGARGVFGRMP----VRNLTSWNVMLAGY 232
+ D+M +PN++T+NA + + + A +FG + V +N+++ Y
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 233 TKAGEL----GLARRVFSEMPLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNE 288
K G++ L + E + D +++ +I GL NG+ + A F +L +G+ P+
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDL 470
Query: 289 VSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRN 348
V+ ++ + G S +L M K G N ++ Y K GN+ A +
Sbjct: 471 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Query: 349 MSVGR----SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
M R ++ S+ ++ G + G E+A L +EM E G+ P+ IT Y
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT-----YEIVKEE 585
Query: 405 LVEQG 409
+V+QG
Sbjct: 586 MVDQG 590
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 182/452 (40%), Gaps = 61/452 (13%)
Query: 85 PNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPG 144
P P+ + TLI F M + + PD +++ + G G L G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 145 TQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEM----PEPNVVTWNAAVTA 200
+L QA G V V ++ I +Y + GD +A V+ M PNVVT+ +
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 201 CFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPL----KD 252
+ G + A G++G++ R ++ +++ ++ G+ K G L ++ +M D
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 253 DVSWSTMIVGLAHNG-----------------------------------SFDQAFGFFR 277
V + ++ GL+ G FD+A FR
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGA------SEFGKILHGFMEKSGFLYISSVNNALID 331
+ GI+P+ + T V+ A G L M+++ +V N +I
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 580
Query: 332 TYSKCGNVAMAQLVFRNMSVGR---SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRP 388
KC + A F N+ G+ IV++ ++I G +EA ++F ++ + P
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640
Query: 389 DGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEF 448
+ +T L++ + ++ +FS M G +P YGC++D + ++ + +++
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 449 ICQMP---ISPNAVIWRTLLGACSIHGNIELA 477
+M ISP+ V + ++ G ++ A
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 141/300 (47%), Gaps = 18/300 (6%)
Query: 188 EPNVVTWNAAVTACFRC-GDVAGA----RGVFGRMPVRNLTSWNVMLAGYTKAGELGLAR 242
EP+ V+ + V C G+V A R V R + S N +L G + ++ +A
Sbjct: 213 EPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVAS 271
Query: 243 RVFSEM----PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC 298
R+ S + P + V++ T+I G G D+AF F+ + + GI P+ ++ + ++
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 299 AQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSI 355
+AG G L G V ++ ID Y K G++A A +V++ M + ++
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
V++T +I GL G EA ++ ++ + G+ P +T+ SL+ G + G ++
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 416 MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PISPNAVIWRTLL-GACSIH 471
M + G P + YG +VD + + A F +M I N V++ +L+ G C ++
Sbjct: 452 MIKM-GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 136/287 (47%), Gaps = 34/287 (11%)
Query: 159 HVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP 218
+ V + L+S+ +CG P PNVVT+ + + G++ A +F M
Sbjct: 266 QIEVASRLLSLVLDCG------------PAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 219 VR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFD 270
R +L +++ ++ GY KAG LG+ ++FS+ K D V +S+ I +G
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 271 QAFGFFRELLREGIRPNEVSLTGVLSACAQAGA-----SEFGKILHGFMEKSGFLYISSV 325
A ++ +L +GI PN V+ T ++ Q G +G+IL ME S Y
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY---- 429
Query: 326 NNALIDTYSKCGNVAMAQLVFRNM-SVGR--SIVSWTSIIAGLAMHGHGEEALQLFHEME 382
++LID + KCGN+ ++ +M +G +V + ++ GL+ G A++ +M
Sbjct: 430 -SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHY 429
+R + + F SL+ ++ ++F ++ +YGI+P + +
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATF 534
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 104/261 (39%), Gaps = 55/261 (21%)
Query: 181 RVFDEMPE----PNVVTWNAAVTACFRCGDVAGARGVF-----GRMPVRNLTSWNVMLAG 231
++FD M ++ N + F+C + A F G+M ++ ++N M+ G
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME-PDIVTYNTMICG 616
Query: 232 YTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
Y L A R+F + + + V+ + +I L N D A F + +G +PN
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR 347
V+ L+D +SK ++ + +F
Sbjct: 677 AVTY-----------------------------------GCLMDWFSKSVDIEGSFKLFE 701
Query: 348 NMS---VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA-CSHS 403
M + SIVS++ II GL G +EA +FH+ ++ + PD + + L+ C
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Query: 404 GLVEQGCEIFSKMKNLYGIEP 424
LVE ++N G++P
Sbjct: 762 RLVEAALLYEHMLRN--GVKP 780
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 166/393 (42%), Gaps = 62/393 (15%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESAR 180
V D +SF +KG G ++ L + GF +V + TTLI + G+ E A+
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 181 RVFDEMPEPNVV----TWNAAVTACFRCGDVAGARGVFGRMP----VRNLTSWNVMLAGY 232
+F EM + +V T+ + F+ G ++ +M NL ++N ++
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 233 TKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNE 288
K G A +VF EM + + V+++T+I GL ++A ++ +GI PN
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 289 VSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRN 348
++ N LID + G + A + R+
Sbjct: 339 ITY-----------------------------------NTLIDGFCGVGKLGKALSLCRD 363
Query: 349 MS---VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
+ + S+V++ +++G G A ++ EMEE G++P +T+ L+ + S
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 406 VEQGCEIFSKMKNLYGIEPTIEHYG------CMVDLYGRAARLHKAYEFICQMPISPNAV 459
+E+ ++ M+ L G+ P + Y C+ A+RL K+ + + PN V
Sbjct: 424 MEKAIQLRLSMEEL-GLVPDVHTYSVLIHGFCIKGQMNEASRLFKS---MVEKNCEPNEV 479
Query: 460 IWRTL-LGACSIHGNIELAELVKA-RLAEMDPN 490
I+ T+ LG C + +L+K E+ PN
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 139/329 (42%), Gaps = 54/329 (16%)
Query: 225 WNVMLAGYTKAGELGLARRVFSEMPLKDDVSWS-------TMIVGLAHNGSFDQAFGFFR 277
+ V++ Y ++ L L+ F+EM V S T +VG + SF+Q + FF
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVG---SSSFNQWWSFFN 153
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG 337
E + + + S ++ C +AG +EKS L I
Sbjct: 154 EN-KSKVVLDVYSFGILIKGCCEAGE----------IEKSFDLLIE-------------- 188
Query: 338 NVAMAQLVFRNMSVGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLL 397
++V +T++I G G E+A LF EM + G+ + T+ L+
Sbjct: 189 --------LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240
Query: 398 YACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---I 454
+G+ +QG E++ KM+ G+ P + Y C+++ + R A++ +M +
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQE-DGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 455 SPNAVIWRTLLGACSIHGNIELAELVKARLAE--MDPNNSGDHVLLSNVYAVAGKWKDVV 512
S N V + TL+G + A V ++ ++PN + L+ V GK +
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV-GKLGKAL 358
Query: 513 SIRRTMTEQSMVKTPGWSMIEINKVMYGF 541
S+ R + + + +P S++ N ++ GF
Sbjct: 359 SLCRDLKSRGL--SP--SLVTYNILVSGF 383
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 171/422 (40%), Gaps = 64/422 (15%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD+ +F+ + G G + L + + +TLI+ G A +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 183 FDEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVRNLTS----WNVMLAGYTK 234
D M E P+ VT+ + + G+ A A +F +M RN+ + +++++ K
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
G A +F+EM +K D V++S++I GL ++G +D RE++ I P+ V+
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALID------------------- 331
+ ++ + G K L+ M G + N+LID
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 332 ----------------TYSKCGNVAMAQLVFRNMSVGRSI---VSWTSIIAGLAMHGHGE 372
+Y K V +FR +S I +++ +++ G G
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 373 EALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNL-----YGIEPTIE 427
A +LF EM GV P +T+ LL +G + + EIF KM+ GI I
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 428 HYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELVKARL 484
H C A+++ A+ C + + P+ V + ++G G++ A+++ ++
Sbjct: 498 HGMC------NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 485 AE 486
E
Sbjct: 552 KE 553
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 172/386 (44%), Gaps = 30/386 (7%)
Query: 187 PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLAR 242
P P + +N +A R G M + ++ + +M+ Y + +L A
Sbjct: 66 PLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAF 125
Query: 243 RVFSEM------PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLS 296
V P D +++ST++ G G +A ++ RP+ V+++ +++
Sbjct: 126 SVLGRAWKLGYEP--DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 297 ACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGR 353
G +L M + GF +++ K GN A+A +FR M ++
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 354 SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIF 413
S+V ++ +I L G ++AL LF+EME G++ D +T+ SL+ + G + G ++
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 414 SKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PISPNAVIWRTLL-GACS 469
+M I P + + ++D++ + +L +A E +M I+P+ + + +L+ G C
Sbjct: 304 REMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 470 ---IHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKT 526
+H ++ +L+ ++ E D + +L N Y A + D + + R ++ + ++
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVT---YSILINSYCKAKRVDDGMRLFREISSKGLIP- 418
Query: 527 PGWSMIEINKVMYGFVAGEKPNEVTE 552
+ I N ++ GF K N E
Sbjct: 419 ---NTITYNTLVLGFCQSGKLNAAKE 441
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 143/312 (45%), Gaps = 21/312 (6%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D +++ + G+ N G G ++ + V + LI ++ + G A+ ++
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 184 DEMPE----PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKA 235
+EM P+ +T+N+ + + + A +F M + ++ ++++++ Y KA
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 236 GELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSL 291
+ R+F E+ K + ++++T+++G +G + A F+E++ G+ P+ V+
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 292 TGVLSACAQAGASEFGKILHGF--MEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM 349
+L G E K L F M+KS + N +I V A +F ++
Sbjct: 459 GILLDGLCDNG--ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 516
Query: 350 S---VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA-CSHSGL 405
S V +V++ +I GL G EA LF +M+E G PD T+ L+ A SGL
Sbjct: 517 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGL 576
Query: 406 VEQGCEIFSKMK 417
+ E+ +MK
Sbjct: 577 I-SSVELIEEMK 587
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 153/334 (45%), Gaps = 20/334 (5%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDS------ 176
PD + + + G S+K + Q + G V V T LI C +
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL--CKNRLVVPAL 68
Query: 177 ESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGY 232
E +R+ D PNVVT+++ +T + G +A A M + N+ +++ ++ Y
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 233 TKAGELGLARRVFS---EMPLKDDV-SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNE 288
K G+L V+ +M + +V ++S++I GL + D+A ++ +G PN
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV 188
Query: 289 VSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRN 348
V+ + + + ++ + G L M + G + N LI Y + G + +A VF
Sbjct: 189 VTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGY 248
Query: 349 MSVG---RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGL 405
M+ +I S+ ++AGL +G E+AL F M+++ D IT+ +++ + +
Sbjct: 249 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACM 308
Query: 406 VEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRA 439
V++ ++F K+K +EP + Y M+ RA
Sbjct: 309 VKEAYDLFYKLK-FKRVEPDFKAYTIMIAELNRA 341
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 93/193 (48%), Gaps = 7/193 (3%)
Query: 278 ELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCG 337
++++ GI P+ V+ + +++ + + + + G MEK G V+ LIDT K
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 338 NVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFI 394
V A V + M + ++V+++S+I GL G +A + HEM+ + P+ ITF
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 395 SLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVD---LYGRAARLHKAYEFICQ 451
+L+ A + G + + ++ M + I+P + Y ++ ++ R K + +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQM-SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 452 MPISPNAVIWRTL 464
+PN V + TL
Sbjct: 182 KGCTPNVVTYSTL 194
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 111/239 (46%), Gaps = 10/239 (4%)
Query: 247 EMPLKDDVSWSTMIVG-LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG-AS 304
+M +K DV T+++ L N A + + GI PN V+ + +++ ++G +
Sbjct: 41 KMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLA 100
Query: 305 EFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR---NMSVGRSIVSWTSI 361
+ + LH K + + + ALID Y+K G ++ V++ MS+ ++ +++S+
Sbjct: 101 DAERRLHEMDSKKINPNVITFS-ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 159
Query: 362 IAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYG 421
I GL MH +EA+++ M G P+ +T+ +L S V+ G ++ M G
Sbjct: 160 IYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ-RG 218
Query: 422 IEPTIEHYGCMVDLYGRAARLHKA---YEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
+ ++ Y +A ++ A + ++ + PN + +L +G +E A
Sbjct: 219 VAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 277
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 173/409 (42%), Gaps = 64/409 (15%)
Query: 124 DSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVF 183
D+ +++ + G+ G + L + HG + ++ I + + G E A+ +F
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 184 D-----------------------------------EMPEPNVV----TWNAAVTACFRC 204
D EM + N+V T+ V
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 205 GDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSW 256
GD+ GA + M N+ + ++ + + G A RV EM + D +
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 257 STMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS----LTGVLSACAQAGASEFGKILHG 312
+++I+GL+ D+A F E++ G++PN + ++G + A A A ++ K
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK---- 546
Query: 313 FMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMSVGRSIV----SWTSIIAGLAMH 368
M + G L + LI+ Y K G V A +R+M V + I+ ++T ++ GL +
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM-VDQGILGDAKTYTVLMNGLFKN 605
Query: 369 GHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEH 428
++A ++F EM G+ PD ++ L+ S G +++ IF +M G+ P +
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVII 664
Query: 429 YGCMVDLYGRAARLHKAYEFICQMPIS---PNAVIWRTLLGACSIHGNI 474
Y ++ + R+ + KA E + +M + PNAV + T++ G++
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 164/401 (40%), Gaps = 39/401 (9%)
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P Y +LI ++M++ V +++ +KG+ + G L
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS-PYTYGTVVKGMCSSGDLDGAYN 438
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGD 206
+ + G +V + TTLI + + A RV EM E +
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP------------- 485
Query: 207 VAGARGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMP---LKDDV-SWSTMIVG 262
++ +N ++ G +KA + AR EM LK + ++ I G
Sbjct: 486 --------------DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
F A + +E+ G+ PN+V TG+++ + G + M G L
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSIVSWTSIIAGLAMHGHGEEALQLFH 379
+ L++ K V A+ +FR M + + S+ +I G + G+ ++A +F
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRA 439
EM E G+ P+ I + LL SG +E+ E+ +M ++ G+ P Y ++D Y ++
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKS 710
Query: 440 ARLHKAYEFICQMPIS---PNAVIWRTLLGACSIHGNIELA 477
L +A+ +M + P++ ++ TL+ C ++E A
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 120/529 (22%), Positives = 210/529 (39%), Gaps = 50/529 (9%)
Query: 87 PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQ 146
P+ +Y TLI+ +M+ + PD F + + G++ +
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 147 LHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACF 202
+ +G + F IS Y E + SA + EM E PN V +
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 203 RCGDVAGA----RGVFGRMPVRNLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDV 254
+ G V A R + + + + ++ V++ G K ++ A +F EM K D
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 255 SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFM 314
S+ +I G + G+ +A F E++ EG+ PN + +L ++G E K L M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 315 EKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS----VGRSIVSWTSIIAGLAMHGH 370
G + +ID Y K G++A A +F M V S V +T+++ G
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLND 747
Query: 371 GEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK----NLYGIEPTI 426
E A+ +F + G F +L+ G E E+ +++ + +G +P
Sbjct: 748 VERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPND 805
Query: 427 EHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTLLGACSIHGNIELAELV--- 480
Y M+D + L A E QM + P + + +LL G AE+
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG--RRAEMFPVF 863
Query: 481 -KARLAEMDPNNSGDHVLLS---NVYAVAG-KWKDVVSIRRTMTEQSMVKTPGWSMIEIN 535
+A A ++P DH++ S N + G K +V + + + ++ S+
Sbjct: 864 DEAIAAGIEP----DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919
Query: 536 KVMYGFVAGEKPNEVTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEE 584
++ GF K E+ E +K+ E M+RL+ Y P V+ I E
Sbjct: 920 ALLSGFA---KVGEM--EVAEKVMENMVRLQ----YIPDSATVIELINE 959
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 119/535 (22%), Positives = 216/535 (40%), Gaps = 107/535 (20%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESA- 179
V PD + F A+ GG ++ +L + G +V T+I G CG + A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 180 ----------------------------RRVFD------EMPE----PNVVTWNAAVTAC 201
+R+ D EM + PNV+ +N + +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 202 FRCGDVAGARGVFGRMPVRNLT----SWNVMLAGYTKAGELGLARRVFSEM-PLKDDV-- 254
G + A + M + L+ ++N ++ GY K G+ A R+ EM + +V
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 255 -SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA-CAQAGASEFGKILHG 312
S++++I L + FD A F E+L + P LT ++S C S+ ++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 313 FMEKSGFLYISSVNNALIDTYSKCGNVAMA------------------------------ 342
F+ K GF+ + +NAL+ + G + A
Sbjct: 496 FLNK-GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 343 ----QLVFRNMSVGRSI----VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFI 394
+F + V R + +++ +I GL EEA+Q + + + +G+ PD T+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 395 SLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP- 453
++ C + E+G E F +M + ++P Y ++ Y R+ RL A E M
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMS-KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 454 --ISPNAVIWRTLLGACSIHGNIELAELV--KARLAEMDPNNSGDHVLLSNVYAVAGKWK 509
ISPN+ + +L+ SI +E A+L+ + R+ ++P N + L + Y G+
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYGKLGQMV 732
Query: 510 DVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAG--EKPNEVTEEAH--DKLRE 560
V + R M ++ + NK+ Y + G + VTE + +++RE
Sbjct: 733 KVECLLREMHSKN---------VHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 125/297 (42%), Gaps = 28/297 (9%)
Query: 132 LKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDS--ESARRVFDEMPE- 188
L G+ G L ++ + G TLIS G CG + A DEM +
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS--GCCGKKKLDEAFMFLDEMVKR 569
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVF------GRMPVRNLTSWNVMLAGYTKAGELG 239
P+ T++ + F V A + G +P ++ +++VM+ G KA
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP--DVYTYSVMIDGCCKAERTE 627
Query: 240 LARRVFSEMPLKD----DVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
+ F EM K+ V ++ +I +G A ++ +GI PN + T ++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVG 352
+ E K+L M G ALID Y K G + + + R M +V
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQG 409
+ +++T +I G A G+ EA +L +EM E G+ PD IT+ +Y G ++QG
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY-----GYLKQG 799
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 103/233 (44%), Gaps = 14/233 (6%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD+++++ + G+ N ++ Q R+G V+ + +I + +E +
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 183 FDEM----PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTK 234
FDEM +PN V +N + A R G ++ A + M + N ++ ++ G +
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
+ A+ +F EM ++ + ++ +I G G + RE+ + + PN+++
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 291 LTGVLSACAQAG-ASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMA 342
T ++ A+ G +E ++L+ EK G + S I Y K G V A
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREK-GIVPDSITYKEFIYGYLKQGGVLEA 804
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 119/535 (22%), Positives = 216/535 (40%), Gaps = 107/535 (20%)
Query: 121 VFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESA- 179
V PD + F A+ GG ++ +L + G +V T+I G CG + A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 180 ----------------------------RRVFD------EMPE----PNVVTWNAAVTAC 201
+R+ D EM + PNV+ +N + +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 202 FRCGDVAGARGVFGRMPVRNLT----SWNVMLAGYTKAGELGLARRVFSEM-PLKDDV-- 254
G + A + M + L+ ++N ++ GY K G+ A R+ EM + +V
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 255 -SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA-CAQAGASEFGKILHG 312
S++++I L + FD A F E+L + P LT ++S C S+ ++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 313 FMEKSGFLYISSVNNALIDTYSKCGNVAMA------------------------------ 342
F+ K GF+ + +NAL+ + G + A
Sbjct: 496 FLNK-GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 343 ----QLVFRNMSVGRSI----VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFI 394
+F + V R + +++ +I GL EEA+Q + + + +G+ PD T+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 395 SLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP- 453
++ C + E+G E F +M + ++P Y ++ Y R+ RL A E M
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMS-KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 454 --ISPNAVIWRTLLGACSIHGNIELAELV--KARLAEMDPNNSGDHVLLSNVYAVAGKWK 509
ISPN+ + +L+ SI +E A+L+ + R+ ++P N + L + Y G+
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYGKLGQMV 732
Query: 510 DVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAG--EKPNEVTEEAH--DKLRE 560
V + R M ++ + NK+ Y + G + VTE + +++RE
Sbjct: 733 KVECLLREMHSKN---------VHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 125/297 (42%), Gaps = 28/297 (9%)
Query: 132 LKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDS--ESARRVFDEMPE- 188
L G+ G L ++ + G TLIS G CG + A DEM +
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS--GCCGKKKLDEAFMFLDEMVKR 569
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVF------GRMPVRNLTSWNVMLAGYTKAGELG 239
P+ T++ + F V A + G +P ++ +++VM+ G KA
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP--DVYTYSVMIDGCCKAERTE 627
Query: 240 LARRVFSEMPLKD----DVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
+ F EM K+ V ++ +I +G A ++ +GI PN + T ++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVG 352
+ E K+L M G ALID Y K G + + + R M +V
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQG 409
+ +++T +I G A G+ EA +L +EM E G+ PD IT+ +Y G ++QG
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY-----GYLKQG 799
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 103/233 (44%), Gaps = 14/233 (6%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
PD+++++ + G+ N ++ Q R+G V+ + +I + +E +
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 183 FDEM----PEPNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTK 234
FDEM +PN V +N + A R G ++ A + M + N ++ ++ G +
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 235 AGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVS 290
+ A+ +F EM ++ + ++ +I G G + RE+ + + PN+++
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 291 LTGVLSACAQAG-ASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMA 342
T ++ A+ G +E ++L+ EK G + S I Y K G V A
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREK-GIVPDSITYKEFIYGYLKQGGVLEA 804
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 158/332 (47%), Gaps = 37/332 (11%)
Query: 159 HVFVGTTLISMYGECGDSESARRVFDEMPEPNVVTWNAAVTACFRCGDVAGARGVFGRMP 218
+ V + L+S+ +CG P PNVVT+ + + G++ A +F M
Sbjct: 266 QIEVASRLLSLVLDCG------------PAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 219 VR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFD 270
R +L +++ ++ GY KAG LG+ ++FS+ K D V +S+ I +G
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 271 QAFGFFRELLREGIRPNEVSLTGVLSACAQAGA-----SEFGKILHGFMEKSGFLYISSV 325
A ++ +L +GI PN V+ T ++ Q G +G+IL ME S Y
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY---- 429
Query: 326 NNALIDTYSKCGNVAMAQLVFRNM-SVGR--SIVSWTSIIAGLAMHGHGEEALQLFHEME 382
++LID + KCGN+ ++ +M +G +V + ++ GL+ G A++ +M
Sbjct: 430 -SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
+R + + F SL+ ++ ++F ++ +YGI+P + + ++ + RL
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEGRL 547
Query: 443 HKA---YEFICQMPISPNAVIWRTLLGACSIH 471
+A + + +M + P+A+ + TL+ A H
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 168/373 (45%), Gaps = 19/373 (5%)
Query: 123 PDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRV 182
P+ ++ +KG+ G + ++ Q + G + + ++LI + +CG+ S +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 183 FDEMPE----PNVVTWNAAVTACFRCGDVAGAR----GVFGRMPVRNLTSWNVMLAGYTK 234
+++M + P+VV + V + G + A + G+ N+ +N ++ G+ +
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 235 AGELGLARRVFSEMPL---KDDVSWSTMIVGLA-HNGSFDQAFGFFRELLREGIRPNEVS 290
A +VF M + K DV+ T ++ ++ G ++A F + + G+ P+ ++
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 291 LTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS 350
++ A + G L M+++ +V N +I KC + A F N+
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Query: 351 VGR---SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVE 407
G+ IV++ ++I G +EA ++F ++ + P+ +T L++ + ++
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 408 QGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIWRTL 464
+FS M G +P YGC++D + ++ + +++ +M ISP+ V + +
Sbjct: 689 GAIRMFSIMAE-KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 747
Query: 465 LGACSIHGNIELA 477
+ G ++ A
Sbjct: 748 IDGLCKRGRVDEA 760
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 141/300 (47%), Gaps = 18/300 (6%)
Query: 188 EPNVVTWNAAVTACFRC-GDVAGA----RGVFGRMPVRNLTSWNVMLAGYTKAGELGLAR 242
EP+ V+ + V C G+V A R V R + S N +L G + ++ +A
Sbjct: 213 EPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVAS 271
Query: 243 RVFSEM----PLKDDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSAC 298
R+ S + P + V++ T+I G G D+AF F+ + + GI P+ ++ + ++
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 299 AQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRSI 355
+AG G L G V ++ ID Y K G++A A +V++ M + ++
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 356 VSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSK 415
V++T +I GL G EA ++ ++ + G+ P +T+ SL+ G + G ++
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 416 MKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PISPNAVIWRTLL-GACSIH 471
M + G P + YG +VD + + A F +M I N V++ +L+ G C ++
Sbjct: 452 MIKM-GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 166/433 (38%), Gaps = 64/433 (14%)
Query: 17 EAMSNTLEPRWVSLLS------KCSSLKPTKQIHTHLYVTGLHTHPLFFGKLL--LHCAV 68
+ + +EP V+ S KC +L+ ++ + G + +G L+ L
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 69 TISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSF 128
+ A+ +++++ + ++N+LI F M + + PD +F
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY-GIKPDVATF 534
Query: 129 AFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE 188
++ G L+ L + F+ G + TLI + + ++FD M
Sbjct: 535 TTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQR 594
Query: 189 ----PNVVTWNAAVTACFRCGDVAGARGVF-----GRMPVRNLTSWNVMLAGYTKAGELG 239
++ N + F+C + A F G+M ++ ++N M+ GY L
Sbjct: 595 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME-PDIVTYNTMICGYCSLRRLD 653
Query: 240 LARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
A R+F + + + V+ + +I L N D A F + +G +PN V+
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY---- 709
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VG 352
L+D +SK ++ + +F M +
Sbjct: 710 -------------------------------GCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 353 RSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYA-CSHSGLVEQGCE 411
SIVS++ II GL G +EA +FH+ ++ + PD + + L+ C LVE
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 798
Query: 412 IFSKMKNLYGIEP 424
++N G++P
Sbjct: 799 YEHMLRN--GVKP 809
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 174/391 (44%), Gaps = 17/391 (4%)
Query: 70 ISDALHYALRLFQHFPNPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFA 129
ISDA+ ++ + PDT + TLI +M + P+ ++
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ-PNLVTYG 229
Query: 130 FALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE- 188
+ G+ G + L + + +V + +T+I + + A +F EM
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 189 ---PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLA 241
PNV+T+++ ++ + A + M R N+ ++N ++ + K G+L A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 242 RRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSA 297
+++ EM + D ++S++I G + D+A F ++ + PN V+ +++
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 298 CAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM---SVGRS 354
+A + G L M + G + + LI + + + AQ+VF+ M V +
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 355 IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFS 414
I+++ +++ GL +G E+A+ +F ++ S + P T+ ++ +G VE G ++F
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 415 KMKNLYGIEPTIEHYGCMVDLYGRAARLHKA 445
+ +L G++P + Y M+ + R +A
Sbjct: 530 SL-SLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 126/278 (45%), Gaps = 15/278 (5%)
Query: 155 GFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PNVVTWNAAVTACFRCGDVAGA 210
G +V ++LIS A R+ +M E PNVVT+NA + A + G + A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 211 RGVFGRMPVRNLT----SWNVMLAGYTKAGELGLARRVFSEMPLKD----DVSWSTMIVG 262
++ M R++ +++ ++ G+ L A+ +F M KD V+++T+I G
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 263 LAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYI 322
D+ FRE+ + G+ N V+ T ++ QA + +++ M G
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 323 SSVNNALIDTYSKCGNVAMAQLVFRNMSVGR---SIVSWTSIIAGLAMHGHGEEALQLFH 379
N L+D K G + A +VF + + +I ++ +I G+ G E+ LF
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 380 EMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
+ GV+PD I + +++ GL E+ +F KM+
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 141/320 (44%), Gaps = 16/320 (5%)
Query: 88 DTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQL 147
+ +Y+T+I + F +M + V P+ +++ + + N ++L
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEME-NKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 148 HCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP----EPNVVTWNAAVTACFR 203
+ +V LI + + G A +++DEM +P++ T+++ +
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 204 CGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRVFSEMPLK----DDVS 255
+ A+ +F M + N+ ++N ++ G+ KA + +F EM + + V+
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 256 WSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFME 315
++T+I G D A F++++ +G+ PN ++ +L + G E ++ +++
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 316 KSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWTSIIAGLAMHGHGE 372
+S N +I+ K G V +F ++S V ++ + ++I+G G E
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 373 EALQLFHEMEESGVRPDGIT 392
EA LF +M E G PD T
Sbjct: 558 EADALFRKMREDGPLPDSGT 577
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 140/316 (44%), Gaps = 14/316 (4%)
Query: 221 NLTSWNVMLAGYTKAGELGLARRVFSEMPL----KDDVSWSTMIVGLAHNGSFDQAFGFF 276
NL ++N+++ + + ++ LA + +M V+ S+++ G H A
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 277 RELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKC 336
+++ G RP+ ++ T ++ + L M + G +++ K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 337 GNVAMAQLVFRNMSVGR---SIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITF 393
G++ +A + M + ++V ++++I L + H ++AL LF EME GVRP+ IT+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 394 ISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLY---GRAARLHKAYEFIC 450
SL+ + + S M I P + + ++D + G+ K Y+ +
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 451 QMPISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD--PNNSGDHVLLSNVYAVAGKW 508
+ I P+ + +L+ +H ++ A+ + + D PN + L+ N + A +
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI-NGFCKAKRI 416
Query: 509 KDVVSIRRTMTEQSMV 524
+ V + R M+++ +V
Sbjct: 417 DEGVELFREMSQRGLV 432
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 145/335 (43%), Gaps = 23/335 (6%)
Query: 265 HNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISS 324
H+ D A G F +++ P+ +LSA A+ + L M++ G +
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 325 VNNALIDTYSKCGNVAMA-QLVFRNMSVGR--SIVSWTSIIAGLAMHGHGEEALQLFHEM 381
N LI+ + + +++A L+ + M +G SIV+ +S++ G +A+ L +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 382 EESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAAR 441
E G RPD ITF +L++ + + +M G +P + YG +V+ +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGD 240
Query: 442 LHKAYEFICQM---PISPNAVIWRTLLGA-CSI-HGNIELAELVKARLAEMDPNNSGDHV 496
+ A+ + +M I N VI+ T++ + C H + L + + PN
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 497 LLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNEVTEEAHD 556
L+S + +W D + M E+ + P +++ N ++ FV K E +
Sbjct: 301 LISCLCNYE-RWSDASRLLSDMIERKI--NP--NVVTFNALIDAFVKEGKLVEA-----E 350
Query: 557 KLREIMLRLRAEAG---YAPQVRG-VLHDIEEEEK 587
KL + M++ + Y+ + G +HD +E K
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 182/421 (43%), Gaps = 21/421 (4%)
Query: 112 FIQMRRHPTVFPDSFSFAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYG 171
F M+R P+ + + + G L ++ + G VF T LI+ YG
Sbjct: 128 FKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYG 187
Query: 172 ECGDSESARRVFDEMPE----PNVVTWNAAVTACFRCG-DVAGARGVFGRMPVR----NL 222
G E++ + D M P+++T+N + AC R G D G G+F M ++
Sbjct: 188 RNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDI 247
Query: 223 TSWNVMLAGYTKAGELGLARRVFSEMP----LKDDVSWSTMIVGLAHNGSFDQAFGFFRE 278
++N +L+ G A VF M + D ++S ++ ++ E
Sbjct: 248 VTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGE 307
Query: 279 LLREGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGN 338
+ G P+ S +L A A++G+ + + M+ +G ++ + L++ + + G
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 339 VAMAQLVFRNMSVGRS---IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFIS 395
+ +F M + ++ +I G+ +E + LFH+M E + PD T+
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 396 LLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHK---AYEFICQM 452
+++AC GL E +I M I P+ + Y +++ +G+AA + A+ + ++
Sbjct: 428 IIFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEV 486
Query: 453 PISPNAVIWRTLLGACSIHGNIELAELVKARLAEMD-PNNSGDHVLLSNVYAVAGKWKDV 511
+P+ + +LL + + G ++ +E + +RL + P N Y GK+++
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Query: 512 V 512
V
Sbjct: 547 V 547
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 168/378 (44%), Gaps = 26/378 (6%)
Query: 118 HPTVFPDSFSFAFALKGVANG-GSLKP-GTQLHC-QAFRHGFDTHVFVGTTLISMYGECG 174
+P+V + +++ ++ + N SL P G+ C F++ + F + + G
Sbjct: 62 NPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFA--LVFKEFAGRG 119
Query: 175 DSESARRVFDEMP-----EPNVVTWNAAVTACFRCGDVAGARGVFGRMPV----RNLTSW 225
D + + R+F M +PN + ++ R G + VF MP R++ S+
Sbjct: 120 DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSY 179
Query: 226 NVMLAGYTKAGE----LGLARRVFSEMPLKDDVSWSTMIVGLAHNG-SFDQAFGFFRELL 280
++ Y + G L L R+ +E ++++T+I A G ++ G F E+
Sbjct: 180 TALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMR 239
Query: 281 REGIRPNEVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVA 340
EGI+P+ V+ +LSACA G + +++ M G + + + L++T+ K +
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 341 MAQLVFRNMSVGRS---IVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLL 397
+ M+ G S I S+ ++ A G +EA+ +FH+M+ +G P+ T+ LL
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 398 YACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQM---PI 454
SG + ++F +MK+ +P Y +++++G + M I
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKS-SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 455 SPNAVIWRTLLGACSIHG 472
P+ + ++ AC G
Sbjct: 419 EPDMETYEGIIFACGKGG 436
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 175/466 (37%), Gaps = 59/466 (12%)
Query: 77 ALRLFQHFPN----PDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFAL 132
+L L N P YNT+I RH + PD ++ L
Sbjct: 195 SLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLL 254
Query: 133 KGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE---- 188
A G + G + + L+ +G+ E + EM
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 189 PNVVTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELGLARRV 244
P++ ++N + A + G + A GVF +M N +++V+L + ++G R++
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 245 FSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQ 300
F EM D +++ +I G F + F +++ E I P+ + G++ AC +
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 301 AGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNM----------- 349
G E + + +M + + S +I+ + + A + F M
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 350 ---------------------------SVGRSIVSWTSIIAGLAMHGHGEEALQLFHEME 382
+ R+ ++ + I G EEA++ + +ME
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 383 ESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARL 442
+S PD T ++L S + LV++ E F +MK I P+I Y M+ +YG+ R
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMK-ASDILPSIMCYCMMLAVYGKTERW 613
Query: 443 HKAYEFICQMPISP----NAVIWRTLLGACSIHGNIELAELVKARL 484
E + +M + + VI + + G N ++ E V +L
Sbjct: 614 DDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKL 659
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 72/279 (25%)
Query: 351 VGRSIVSWTSIIAGLAMHGHGEEALQ---------------------------------- 376
V RS+ S+T++I +G E +L+
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 231
Query: 377 --LFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMKNLYGIEPTIEHYGCMVD 434
LF EM G++PD +T+ +LL AC+ GL ++ +F M N GI P + Y +V+
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVE 290
Query: 435 LYGRAARLHKAYEFICQMPIS---PNAVIWRTLLGACSIHGNIELAELV--KARLAEMDP 489
+G+ RL K + + +M P+ + LL A + G+I+ A V + + A P
Sbjct: 291 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 350
Query: 490 NNSGDHVLLSNVYAVAGKWKDVVSIRRTMTEQSMVKTPGWSMIEINKVMYGFVAGEKPNE 549
N + VLL N++ +G++ DV R+ E T P+
Sbjct: 351 NANTYSVLL-NLFGQSGRYDDV---RQLFLEMKSSNT-------------------DPDA 387
Query: 550 VTEEAHDKLREIMLRLRAEAGYAPQVRGVLHDIEEEEKE 588
T I++ + E GY +V + HD+ EE E
Sbjct: 388 AT-------YNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 166/392 (42%), Gaps = 64/392 (16%)
Query: 146 QLHCQAFRHGFDT--HVFVGTTLISMYGEC--GDSESARRVFDEMP----EPNVVTWNAA 197
L + FR D+ + V + I + G C G+ E ++++ E +P T+N
Sbjct: 206 DLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTI 265
Query: 198 VTACFRCGDVAGARGVFGRMP----VRNLTSWNVMLAGYTKAGELGLARRVFSEMP---L 250
+ A + D +G GV M V N ++ +++ K G++ A ++F EM +
Sbjct: 266 INAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGI 325
Query: 251 KDDV-SWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAGASEFGKI 309
+ DV ++++I G+ +AF F EL +G+ P+ + ++ + G +I
Sbjct: 326 ESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEI 385
Query: 310 LHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLV------------------------ 345
L M+ G V N LID Y + G V A ++
Sbjct: 386 LMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFN 445
Query: 346 ------------FRNMS--VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGI 391
FR M V S VS+T++I G+ EEA +LF EM GV+P+ I
Sbjct: 446 RLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAI 505
Query: 392 TFISLLYACSHSGLVEQGCEIFSKMKNLYGIEP------TIEHYGCMVDLYGRAARLHKA 445
T+ ++YA G +++ ++ + M+ G++P ++ H C+ D A RL
Sbjct: 506 TYNVMIYAYCKQGKIKEARKLRANME-ANGMDPDSYTYTSLIHGECIADNVDEAMRL--- 561
Query: 446 YEFICQMPISPNAVIWRTLLGACSIHGNIELA 477
+ + + N+V + ++ S G + A
Sbjct: 562 FSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 156/358 (43%), Gaps = 20/358 (5%)
Query: 79 RLFQHFP----NPDTFMYNTLIRXXXXXXXXXXXXHPFIQMRRHPTVFPDSFSFAFALKG 134
+L + F P+ + YNT+I M++ V+ + ++ ++
Sbjct: 245 KLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVY-NKVTYTLLMEL 303
Query: 135 VANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMPE----PN 190
G + +L + G ++ V V T+LIS G+ + A +FDE+ E P+
Sbjct: 304 SVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS 363
Query: 191 VVTWNAAVTACFRCGDVAGARGVFGRMPVR--NLTS--WNVMLAGYTKAGELGLARRVFS 246
T+ A + + G++ A + M + N+T +N ++ GY + G + A ++
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 247 EMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVLSACAQAG 302
M K D + +T+ +D+A + ++ G++ + VS T ++ + G
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483
Query: 303 ASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFRNMS---VGRSIVSWT 359
E K L M G + N +I Y K G + A+ + NM + ++T
Sbjct: 484 NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYT 543
Query: 360 SIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSGLVEQGCEIFSKMK 417
S+I G + + +EA++LF EM G+ + +T+ ++ S +G ++ ++ +MK
Sbjct: 544 SLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 128 FAFALKGVANGGSLKPGTQLHCQAFRHGFDTHVFVGTTLISMYGECGDSESARRVFDEMP 187
F + G G + + ++ + GF VF T+ S + + A++ M
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 188 EPNV----VTWNAAVTACFRCGDVAGARGVFGRMPVR----NLTSWNVMLAGYTKAGELG 239
E V V++ + + G+V A+ +F M + N ++NVM+ Y K G++
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 240 LARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPNEVSLTGVL 295
AR++ + M D +++++I G + D+A F E+ +G+ N V+ T ++
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 296 SACAQAGASEFGKILHGFMEKSGFLYISSVNNALI 330
S ++AG S+ L+ M++ G+ + V ALI
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 106/259 (40%), Gaps = 11/259 (4%)
Query: 232 YTKAGELGLARRVFSEMPLK----DDVSWSTMIVGLAHNGSFDQAFGFFRELLREGIRPN 287
Y G RVF M K D+ S +V D FR ++ G++
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 288 EVSLTGVLSACAQAGASEFGKILHGFMEKSGFLYISSVNNALIDTYSKCGNVAMAQLVFR 347
SLT V+ + G E K L G + N +I+ Y K + + + V +
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 348 NMS---VGRSIVSWTSIIAGLAMHGHGEEALQLFHEMEESGVRPDGITFISLLYACSHSG 404
M V + V++T ++ +G +A +LF EM E G+ D + SL+ G
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 405 LVEQGCEIFSKMKNLYGIEPTIEHYGCMVDLYGRAARLHKAYEFICQMP---ISPNAVIW 461
+++ +F ++ G+ P+ YG ++D + + A + +M ++ V++
Sbjct: 344 NMKRAFLLFDELTE-KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 462 RTLLGACSIHGNIELAELV 480
TL+ G ++ A ++
Sbjct: 403 NTLIDGYCRKGMVDEASMI 421