Miyakogusa Predicted Gene
- Lj4g3v1615840.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1615840.1 Non Chatacterized Hit- tr|D7TND2|D7TND2_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,99.34,0,no
description,Ubiquitin-conjugating enzyme/RWD-like;
UBIQUITIN_CONJUGAT_2,Ubiquitin-conjugating enz,CUFF.49523.1
(152 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02760.1 | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enz... 313 4e-86
AT1G14400.2 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein ... 310 2e-85
AT1G14400.1 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein ... 310 2e-85
AT5G62540.1 | Symbols: UBC3 | ubiquitin-conjugating enzyme 3 | c... 284 2e-77
AT4G27960.1 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 | c... 147 3e-36
AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 146 6e-36
AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 146 6e-36
AT5G53300.4 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 146 6e-36
AT5G53300.2 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 146 6e-36
AT5G53300.1 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 146 6e-36
AT4G27960.2 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 | c... 145 7e-36
AT5G41700.5 | Symbols: UBC8 | ubiquitin conjugating enzyme 8 | c... 143 4e-35
AT5G41700.1 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 143 4e-35
AT5G41700.2 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 143 4e-35
AT3G08690.2 | Symbols: UBC11 | ubiquitin-conjugating enzyme 11 |... 142 7e-35
AT3G08690.1 | Symbols: UBC11, ATUBC11 | ubiquitin-conjugating en... 142 7e-35
AT2G16740.1 | Symbols: UBC29 | ubiquitin-conjugating enzyme 29 |... 141 1e-34
AT5G56150.2 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |... 141 2e-34
AT5G56150.1 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |... 141 2e-34
AT3G08700.1 | Symbols: UBC12 | ubiquitin-conjugating enzyme 12 |... 139 9e-34
AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 139 9e-34
AT5G41700.4 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 138 1e-33
AT3G20060.1 | Symbols: UBC19 | ubiquitin-conjugating enzyme19 | ... 129 5e-31
AT1G50490.1 | Symbols: UBC20 | ubiquitin-conjugating enzyme 20 |... 127 3e-30
AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 127 3e-30
AT1G78870.2 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enz... 126 5e-30
AT1G64230.5 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 126 5e-30
AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 126 5e-30
AT3G20060.2 | Symbols: UBC19 | ubiquitin-conjugating enzyme19 | ... 124 2e-29
AT1G78870.1 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enz... 122 1e-28
AT1G16890.3 | Symbols: UBC36 | ubiquitin-conjugating enzyme 36 |... 120 3e-28
AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | sum... 120 4e-28
AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein ... 116 5e-27
AT5G41700.3 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 115 1e-26
AT3G46460.1 | Symbols: UBC13 | ubiquitin-conjugating enzyme 13 |... 115 2e-26
AT5G25760.2 | Symbols: PEX4 | peroxin4 | chr5:8967983-8969173 FO... 114 3e-26
AT5G25760.1 | Symbols: PEX4, UBC21 | peroxin4 | chr5:8967983-896... 114 3e-26
AT3G55380.1 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |... 114 3e-26
AT5G53300.3 | Symbols: | ubiquitin-conjugating enzyme 10 | chr5... 113 5e-26
AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-con... 110 3e-25
AT5G05080.2 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating en... 110 4e-25
AT5G05080.1 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating en... 110 4e-25
AT1G36340.1 | Symbols: UBC31 | ubiquitin-conjugating enzyme 31 |... 107 3e-24
AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 105 1e-23
AT1G78870.3 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enz... 105 2e-23
AT3G24515.1 | Symbols: UBC37 | ubiquitin-conjugating enzyme 37 |... 102 1e-22
AT5G50870.1 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |... 101 2e-22
AT2G46030.1 | Symbols: UBC6 | ubiquitin-conjugating enzyme 6 | c... 99 1e-21
AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-con... 98 2e-21
AT5G50870.2 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |... 97 3e-21
AT1G63800.1 | Symbols: UBC5 | ubiquitin-conjugating enzyme 5 | c... 97 6e-21
AT3G55380.2 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |... 96 8e-21
AT5G41340.1 | Symbols: UBC4, ATUBC4 | ubiquitin conjugating enzy... 96 1e-20
AT4G36800.2 | Symbols: RCE1 | RUB1 conjugating enzyme 1 | chr4:1... 86 7e-18
AT4G36800.1 | Symbols: RCE1 | RUB1 conjugating enzyme 1 | chr4:1... 86 7e-18
AT2G18600.1 | Symbols: | Ubiquitin-conjugating enzyme family pr... 84 4e-17
AT2G32790.1 | Symbols: | Ubiquitin-conjugating enzyme family pr... 79 9e-16
AT5G50430.2 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |... 72 2e-13
AT5G50430.1 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |... 72 2e-13
AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | Ubiquitin-conjugating e... 72 2e-13
AT1G75440.1 | Symbols: UBC16 | ubiquitin-conjugating enzyme 16 |... 71 3e-13
AT1G17280.2 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |... 70 4e-13
AT1G17280.1 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |... 70 4e-13
AT4G36410.1 | Symbols: UBC17 | ubiquitin-conjugating enzyme 17 |... 70 4e-13
AT5G42990.1 | Symbols: UBC18 | ubiquitin-conjugating enzyme 18 |... 69 1e-12
AT1G53025.1 | Symbols: | Ubiquitin-conjugating enzyme family pr... 68 2e-12
AT3G17000.1 | Symbols: UBC32 | ubiquitin-conjugating enzyme 32 |... 64 5e-11
AT2G16920.1 | Symbols: UBC23, PFU2 | ubiquitin-conjugating enzym... 62 2e-10
AT1G53023.1 | Symbols: | Ubiquitin-conjugating enzyme family pr... 61 2e-10
AT3G15355.1 | Symbols: UBC25, PFU1 | ubiquitin-conjugating enzym... 59 9e-10
AT5G50430.3 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |... 54 5e-08
AT2G36060.1 | Symbols: MMZ3, UEV1C | MMS ZWEI homologue 3 | chr2... 52 1e-07
AT2G36060.3 | Symbols: MMZ3, UEV1C | MMS ZWEI homologue 3 | chr2... 52 2e-07
AT1G70660.2 | Symbols: MMZ2 | MMS ZWEI homologue 2 | chr1:266407... 51 2e-07
AT1G70660.1 | Symbols: MMZ2, UEV1B | MMS ZWEI homologue 2 | chr1... 51 3e-07
AT1G70650.2 | Symbols: | Ran BP2/NZF zinc finger-like superfami... 50 7e-07
AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | phosphate 2 | chr2... 50 8e-07
AT3G52560.1 | Symbols: UEV1D-4, MMZ4, UEV1D | ubiquitin E2 varia... 49 2e-06
>AT2G02760.1 | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme
2 | chr2:774271-775149 FORWARD LENGTH=152
Length = 152
Score = 313 bits (801), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 148/152 (97%), Positives = 152/152 (100%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152
PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152
>AT1G14400.2 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein 1 |
chr1:4927294-4928136 REVERSE LENGTH=152
Length = 152
Score = 310 bits (794), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/152 (96%), Positives = 152/152 (100%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152
PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152
>AT1G14400.1 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein 1 |
chr1:4927294-4928136 REVERSE LENGTH=152
Length = 152
Score = 310 bits (794), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/152 (96%), Positives = 152/152 (100%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152
PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152
>AT5G62540.1 | Symbols: UBC3 | ubiquitin-conjugating enzyme 3 |
chr5:25104679-25105465 FORWARD LENGTH=150
Length = 150
Score = 284 bits (726), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 132/150 (88%), Positives = 143/150 (95%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
M+TPA+KRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60
Query: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61 EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120
Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWT 150
PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSYV 150
>AT4G27960.1 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 |
chr4:13916065-13917203 REVERSE LENGTH=148
Length = 148
Score = 147 bits (370), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 89/138 (64%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVR 142
E A M+ +K +Y R
Sbjct: 122 EIAHMYKTDKNKYESTAR 139
>AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=148
Length = 148
Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPN+ ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVREIVEQSWT 150
E A M+ ++ +Y R SWT
Sbjct: 122 EIAHMYKTDRAKYESTAR-----SWT 142
>AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=148
Length = 148
Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPN+ ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVREIVEQSWT 150
E A M+ ++ +Y R SWT
Sbjct: 122 EIAHMYKTDRAKYESTAR-----SWT 142
>AT5G53300.4 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP ++P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVREIVEQSWT 150
E A M+ +K +Y R SWT
Sbjct: 122 EIAHMYKTDKNKYESTAR-----SWT 142
>AT5G53300.2 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP ++P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVREIVEQSWT 150
E A M+ +K +Y R SWT
Sbjct: 122 EIAHMYKTDKNKYESTAR-----SWT 142
>AT5G53300.1 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP ++P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVREIVEQSWT 150
E A M+ +K +Y R SWT
Sbjct: 122 EIAHMYKTDKNKYESTAR-----SWT 142
>AT4G27960.2 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 |
chr4:13916065-13917293 REVERSE LENGTH=178
Length = 178
Score = 145 bits (367), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 89/138 (64%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +T+ F DYP
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 92 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151
Query: 125 EAARMFSENKREYNRRVR 142
E A M+ +K +Y R
Sbjct: 152 EIAHMYKTDKNKYESTAR 169
>AT5G41700.5 | Symbols: UBC8 | ubiquitin conjugating enzyme 8 |
chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 89/138 (64%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP ++P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVR 142
E A M+ ++ +Y R
Sbjct: 122 EIAHMYKTDRAKYEATAR 139
>AT5G41700.1 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 89/138 (64%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP ++P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVR 142
E A M+ ++ +Y R
Sbjct: 122 EIAHMYKTDRAKYEATAR 139
>AT5G41700.2 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 89/138 (64%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP ++P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVR 142
E A M+ ++ +Y R
Sbjct: 122 EIAHMYKTDRAKYEATAR 139
>AT3G08690.2 | Symbols: UBC11 | ubiquitin-conjugating enzyme 11 |
chr3:2641487-2642489 FORWARD LENGTH=148
Length = 148
Score = 142 bits (359), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP+ S P ++ W A I GP ++P+ GG F +++ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F ++++HPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVREIVEQSWT 150
E A M+ ++ +Y R SWT
Sbjct: 122 EIAHMYKTDRSKYESTAR-----SWT 142
>AT3G08690.1 | Symbols: UBC11, ATUBC11 | ubiquitin-conjugating
enzyme 11 | chr3:2641487-2642489 FORWARD LENGTH=148
Length = 148
Score = 142 bits (359), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP+ S P ++ W A I GP ++P+ GG F +++ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F ++++HPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVREIVEQSWT 150
E A M+ ++ +Y R SWT
Sbjct: 122 EIAHMYKTDRSKYESTAR-----SWT 142
>AT2G16740.1 | Symbols: UBC29 | ubiquitin-conjugating enzyme 29 |
chr2:7267880-7268737 FORWARD LENGTH=148
Length = 148
Score = 141 bits (356), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 95/146 (65%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A +R++++ K LQ+DPP S P ++ W A I GP+++P+ GG F + + F DYP
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++G+ICLDIL++QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVREIVEQSWT 150
E A ++ +K +Y E + +SWT
Sbjct: 122 EIAHIYKTDKTKY-----EAMARSWT 142
>AT5G56150.2 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |
chr5:22729756-22730964 FORWARD LENGTH=148
Length = 148
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR+ ++ + LQ+DPP S P +++ W A I GP D+P+ GG F +T+ F DYP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F ++++HPNI ++GSICLDIL+ QWSP V+ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVREIVEQSWT 150
E A ++ ++ +Y E QSWT
Sbjct: 122 EIAHIYKTDRVKY-----ESTAQSWT 142
>AT5G56150.1 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |
chr5:22729756-22730964 FORWARD LENGTH=148
Length = 148
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR+ ++ + LQ+DPP S P +++ W A I GP D+P+ GG F +T+ F DYP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F ++++HPNI ++GSICLDIL+ QWSP V+ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARMFSENKREYNRRVREIVEQSWT 150
E A ++ ++ +Y E QSWT
Sbjct: 122 EIAHIYKTDRVKY-----ESTAQSWT 142
>AT3G08700.1 | Symbols: UBC12 | ubiquitin-conjugating enzyme 12 |
chr3:2643482-2644545 FORWARD LENGTH=149
Length = 149
Score = 139 bits (349), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 91/147 (61%), Gaps = 6/147 (4%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDY 63
A KR+ R+ + +Q+ PPA S P + +I W A I GP D+P+ GG F +++ F+ DY
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 123
P KPP V F ++++HPNI + GSICLDIL+ QWSP + +L SI SLL DPNPN P
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLV 121
Query: 124 SEAARMFSENKREYNRRVREIVEQSWT 150
E A ++ +K +Y E Q WT
Sbjct: 122 PEIAHLYKVDKSKY-----ESTAQKWT 143
>AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=157
Length = 157
Score = 139 bits (349), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 14/155 (9%)
Query: 5 ARKRLMRDFKRLQQDPP----AGISG-----APQDNNIMLWNAVIFGPDDTPWDGGTFKL 55
A KR++++ K LQ+DPP A +SG P ++ W A I GP D+P+ GG F +
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAEVSGHCYGTCPVAEDMFHWQATIMGPSDSPYSGGVFLV 61
Query: 56 TLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCD 115
T+ F DYP KPP V F +++FHPN+ ++GSICLDIL+ QWSP ++ +L SI SLL D
Sbjct: 62 TIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTD 121
Query: 116 PNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150
PNP+ P E A M+ ++ +Y R SWT
Sbjct: 122 PNPDDPLVPEIAHMYKTDRAKYESTAR-----SWT 151
>AT5G41700.4 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=149
Length = 149
Score = 138 bits (347), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
Query: 5 ARKRLMRDFKRLQQDPPAG-ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDY 63
A KR++++ K LQ+DPP I P ++ W A I GP ++P+ GG F +T+ F DY
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 123
P KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
Query: 124 SEAARMFSENKREYNRRVR 142
E A M+ ++ +Y R
Sbjct: 122 PEIAHMYKTDRAKYEATAR 140
>AT3G20060.1 | Symbols: UBC19 | ubiquitin-conjugating enzyme19 |
chr3:7002927-7004283 REVERSE LENGTH=181
Length = 181
Score = 129 bits (325), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 92/145 (63%), Gaps = 1/145 (0%)
Query: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTE 61
S KRL + L GIS P+++NI W I G DT ++G ++L+L F+
Sbjct: 34 SHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSN 93
Query: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
DYP K P V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP
Sbjct: 94 DYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSP 153
Query: 122 ANSEAARMFSENKREYNRRVREIVE 146
N++AA+++S N+ EY + V ++ +
Sbjct: 154 LNNQAAQLWS-NQEEYRKMVEKLYK 177
>AT1G50490.1 | Symbols: UBC20 | ubiquitin-conjugating enzyme 20 |
chr1:18705005-18706303 REVERSE LENGTH=180
Length = 180
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 92/140 (65%), Gaps = 1/140 (0%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KRL + L GIS P+++NI W I G DT ++G ++L+L F+ DYP K
Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFK 97
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
PP V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP N++A
Sbjct: 98 PPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 157
Query: 127 ARMFSENKREYNRRVREIVE 146
A+++S N+ EY + V ++ +
Sbjct: 158 AQLWS-NQEEYRKMVEKLYK 176
>AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enzyme
36 | chr1:5776550-5778327 REVERSE LENGTH=153
Length = 153
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 88/137 (64%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P +
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 127 ARMFSENKREYNRRVRE 143
A+ + N+ E +E
Sbjct: 128 AKHWKSNEAEAVETAKE 144
>AT1G78870.2 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enzyme
35 | chr1:29650589-29652203 FORWARD LENGTH=153
Length = 153
Score = 126 bits (317), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 89/137 (64%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
+R++++ +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P +
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 127 ARMFSENKREYNRRVRE 143
A+ + N+ E +E
Sbjct: 128 AKHWKSNEAEAVDTAKE 144
>AT1G64230.5 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=190
Length = 190
Score = 126 bits (317), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 92/188 (48%), Gaps = 47/188 (25%)
Query: 5 ARKRLMRDFKRLQQDPPAGISG-------------------------------------- 26
A KR++++ K LQ+DPP S
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAVDNASKLLVLIELEDCCRRFSNCSCILLLEKSQDIAMA 61
Query: 27 ----APQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82
P ++ W A I GP D+P+ GG F +T+ F DYP KPP V F +++FHPN+
Sbjct: 62 HVLLCPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVN 121
Query: 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 142
++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ ++ +Y R
Sbjct: 122 SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 181
Query: 143 EIVEQSWT 150
SWT
Sbjct: 182 -----SWT 184
>AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=190
Length = 190
Score = 126 bits (317), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 92/188 (48%), Gaps = 47/188 (25%)
Query: 5 ARKRLMRDFKRLQQDPPAGISG-------------------------------------- 26
A KR++++ K LQ+DPP S
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAVDNASKLLVLIELEDCCRRFSNCSCILLLEKSQDIAMA 61
Query: 27 ----APQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82
P ++ W A I GP D+P+ GG F +T+ F DYP KPP V F +++FHPN+
Sbjct: 62 HVLLCPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVN 121
Query: 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 142
++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ ++ +Y R
Sbjct: 122 SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 181
Query: 143 EIVEQSWT 150
SWT
Sbjct: 182 -----SWT 184
>AT3G20060.2 | Symbols: UBC19 | ubiquitin-conjugating enzyme19 |
chr3:7002927-7003727 REVERSE LENGTH=136
Length = 136
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Query: 23 GISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82
GIS P+++NI W I G DT ++G ++L+L F+ DYP K P V+F + FHPN+
Sbjct: 10 GISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVD 69
Query: 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 142
G+ICLDILQ++WS YDV IL SIQSLL +PN +SP N++AA+++S N+ EY + V
Sbjct: 70 LYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWS-NQEEYRKMVE 128
Query: 143 EIVE 146
++ +
Sbjct: 129 KLYK 132
>AT1G78870.1 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enzyme
35 | chr1:29650589-29652203 FORWARD LENGTH=154
Length = 154
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDG-GTFKLTLQFTEDYPN 65
+R++++ +RL +P GIS +P ++N+ +N +I GP +P++G G FKL L E+YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGRGVFKLELFLPEEYPM 67
Query: 66 KPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSE 125
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P +
Sbjct: 68 AAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSEN 127
Query: 126 AARMFSENKRE 136
A+ + N+ E
Sbjct: 128 IAKHWKSNEAE 138
>AT1G16890.3 | Symbols: UBC36 | ubiquitin-conjugating enzyme 36 |
chr1:5776550-5778327 REVERSE LENGTH=162
Length = 162
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 9/146 (6%)
Query: 7 KRLMRDFKRLQQ---------DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 57
+R++++ +RL DP GIS +P + N+ +N +I GP +P++GG FKL L
Sbjct: 8 RRIIKETQRLLSEPGNFITSFDPSPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLEL 67
Query: 58 QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 117
E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PN
Sbjct: 68 FLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 127
Query: 118 PNSPANSEAARMFSENKREYNRRVRE 143
P+ P + A+ + N+ E +E
Sbjct: 128 PDDPLSENIAKHWKSNEAEAVETAKE 153
>AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | sumo
conjugation enzyme 1 | chr3:21428831-21430110 REVERSE
LENGTH=160
Length = 160
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLTLQF 59
AR RL + K +++ P G P+ N+M+W+ I G T W+GG F LT+ F
Sbjct: 6 ARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHF 65
Query: 60 TEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--WSPIYDVAAILTSIQSLLCDPN 117
+EDYP+KPP +F FHPN+Y G++CL IL W P V IL IQ LL PN
Sbjct: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLDTPN 125
Query: 118 PNSPANSEAARMFSENKREYNRRVR 142
P PA ++ +F ++ EY +RV+
Sbjct: 126 PADPAQTDGYHLFCQDPVEYKKRVK 150
>AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein 7 |
chr5:23919868-23921304 REVERSE LENGTH=203
Length = 203
Score = 116 bits (291), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 85/145 (58%), Gaps = 14/145 (9%)
Query: 18 QDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM 76
+ P G S G + NI W+ I GP DT ++GG F + F ++YPN PPTVRF S M
Sbjct: 55 KHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDM 114
Query: 77 FHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPAN 123
+HPN+Y+DG +C+ IL +W+P++ V +I+ SI S+L PN SPAN
Sbjct: 115 WHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPAN 174
Query: 124 SEAARMFSENKREYNRRVREIVEQS 148
EAA+ + + + E+ ++V V +S
Sbjct: 175 VEAAKEWRDKRDEFKKKVSRCVRKS 199
>AT5G41700.3 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677021 FORWARD LENGTH=145
Length = 145
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP ++P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ + Q
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTLIFQ 107
>AT3G46460.1 | Symbols: UBC13 | ubiquitin-conjugating enzyme 13 |
chr3:17096120-17097315 REVERSE LENGTH=166
Length = 166
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 81/137 (59%), Gaps = 13/137 (9%)
Query: 25 SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD 84
+G + NI W+ I GP DT ++GG F + F ++YPN PPTVRF S ++HPN+Y D
Sbjct: 26 AGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPD 85
Query: 85 GSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFS 131
G +C+ IL +W+P++ V +I+ SI S+L PN SPAN EAA+ +
Sbjct: 86 GRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWR 145
Query: 132 ENKREYNRRVREIVEQS 148
E + E+ ++V V +S
Sbjct: 146 EKRDEFKKKVSRCVRKS 162
>AT5G25760.2 | Symbols: PEX4 | peroxin4 | chr5:8967983-8969173
FORWARD LENGTH=157
Length = 157
Score = 114 bits (285), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 5 ARKRLMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTED 62
+R RL +++K +Q++ A I D NI W A+I GP +TP++GG F+L E
Sbjct: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
Query: 63 YPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP
Sbjct: 64 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
Query: 122 ANSEAARMF-SENKREYN 138
N ++ + S + R +N
Sbjct: 124 LNCDSGNLLRSGDVRGFN 141
>AT5G25760.1 | Symbols: PEX4, UBC21 | peroxin4 |
chr5:8967983-8969173 FORWARD LENGTH=157
Length = 157
Score = 114 bits (285), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 5 ARKRLMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTED 62
+R RL +++K +Q++ A I D NI W A+I GP +TP++GG F+L E
Sbjct: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
Query: 63 YPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP
Sbjct: 64 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
Query: 122 ANSEAARMF-SENKREYN 138
N ++ + S + R +N
Sbjct: 124 LNCDSGNLLRSGDVRGFN 141
>AT3G55380.1 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |
chr3:20531520-20532895 FORWARD LENGTH=167
Length = 167
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 13/137 (9%)
Query: 25 SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD 84
+G + N+ W+ I GP DT ++GG F + F E+YP PPTV F S M+HPN+Y+D
Sbjct: 27 AGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSD 86
Query: 85 GSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFS 131
G +C+ IL +W+P++ V +I+ SI S+L PN SPAN EAA+ +
Sbjct: 87 GKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWR 146
Query: 132 ENKREYNRRVREIVEQS 148
+N+ E+ ++V V +S
Sbjct: 147 DNRAEFRKKVSRCVRRS 163
>AT5G53300.3 | Symbols: | ubiquitin-conjugating enzyme 10 |
chr5:21633187-21633989 REVERSE LENGTH=109
Length = 109
Score = 113 bits (282), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 68/101 (67%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP ++P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAI 105
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
>AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 |
Ubiquitin-conjugating enzyme family protein |
chr3:4423569-4424797 REVERSE LENGTH=182
Length = 182
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KR+ R+ L DPP S P+ +N+ W A I GP TP++GG F L + F DYP K
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
PP + F +R++H N+ G + ++IL++ WSP + +L +I+S+ P P SPA
Sbjct: 99 PPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVI 158
Query: 127 ARMFSENKREYNRRVRE 143
AR++ ++ +++ +E
Sbjct: 159 ARLYLTDREKHDEVAKE 175
>AT5G05080.2 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating
enzyme 22 | chr5:1498727-1499972 REVERSE LENGTH=251
Length = 251
Score = 110 bits (275), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 79/136 (58%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
K+L ++ K L + PP GI D + A I GP TP++ G F++ L + D+P+
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
PP F++++FHPN+ ++G IC++ L+ W+P + +L+ ++ LL +P P S N +A
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQA 132
Query: 127 ARMFSENKREYNRRVR 142
+M EN EY R R
Sbjct: 133 GKMLLENYDEYARHAR 148
>AT5G05080.1 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating
enzyme 22 | chr5:1498727-1499972 REVERSE LENGTH=251
Length = 251
Score = 110 bits (275), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 79/136 (58%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
K+L ++ K L + PP GI D + A I GP TP++ G F++ L + D+P+
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
PP F++++FHPN+ ++G IC++ L+ W+P + +L+ ++ LL +P P S N +A
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQA 132
Query: 127 ARMFSENKREYNRRVR 142
+M EN EY R R
Sbjct: 133 GKMLLENYDEYARHAR 148
>AT1G36340.1 | Symbols: UBC31 | ubiquitin-conjugating enzyme 31 |
chr1:13683791-13684924 REVERSE LENGTH=154
Length = 154
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 76/115 (66%)
Query: 31 NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLD 90
NNI W AVI GPD TP++GG F L+++F DYP KPP F + ++HPNI +GSIC++
Sbjct: 34 NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMN 93
Query: 91 ILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIV 145
IL+++W+P V +L SI LL PNP+ P E ++F N+ ++++R RE
Sbjct: 94 ILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFT 148
>AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enzyme
36 | chr1:5776550-5777903 REVERSE LENGTH=120
Length = 120
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%)
Query: 36 WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ 95
+N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 63
Query: 96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 143
WSP + +L SIQ+LL PNP+ P + A+ + N+ E +E
Sbjct: 64 WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKE 111
>AT1G78870.3 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enzyme
35 | chr1:29650589-29651858 FORWARD LENGTH=112
Length = 112
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 70/105 (66%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
+R++++ +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS 111
P VRF+++++HPNI G ICLDIL+++WSP + +L S
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLRYMS 112
>AT3G24515.1 | Symbols: UBC37 | ubiquitin-conjugating enzyme 37 |
chr3:8934569-8936207 REVERSE LENGTH=409
Length = 409
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 13/153 (8%)
Query: 8 RLMRDFKRLQQDPPAGIS---------GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 58
R+ ++ K L DPP G S G+ + +A I GP+DT + G F L +Q
Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69
Query: 59 FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLC 114
E YP +PP V F + ++HPNI G ICLDIL + W P +++ +LTS++ LL
Sbjct: 70 IPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLS 129
Query: 115 DPNPNSPANSEAARMFSENKREYNRRVREIVEQ 147
+PNP+ E +R + N++ ++ + RE+ E+
Sbjct: 130 EPNPDDGLMCEVSREYKYNRQTFDYKAREMTEK 162
>AT5G50870.1 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |
chr5:20699626-20700998 REVERSE LENGTH=192
Length = 192
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 82/142 (57%), Gaps = 9/142 (6%)
Query: 10 MRDFKRLQQD--------PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTE 61
M DF R+Q++ +GI P+ +N+ I GP TP++GGTF++ + +
Sbjct: 1 MIDFSRIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPD 60
Query: 62 DYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
YP +PP ++F ++++HPNI + G+ICLDIL++QWSP + L SIQ+LL P P
Sbjct: 61 GYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKD 120
Query: 121 PANSEAARMFSENKREYNRRVR 142
P ++ A + +N + + R
Sbjct: 121 PQDAVVAEQYMKNYQVFVSTAR 142
>AT2G46030.1 | Symbols: UBC6 | ubiquitin-conjugating enzyme 6 |
chr2:18932243-18933421 REVERSE LENGTH=183
Length = 183
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 87/149 (58%), Gaps = 6/149 (4%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
M++P+++R M K + D ++++ ++ GP D+ + GG +K+ ++
Sbjct: 1 MASPSKRREMDMMKLMMSDYKVDTV----NDDLQMFYVTFHGPTDSLYQGGVWKIKVELP 56
Query: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNP 118
E YP K P+V FV++++HPN+ + G++CLD++ WSP++D+ + S + LL PNP
Sbjct: 57 EAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNP 116
Query: 119 NSPANSEAARMFSENKREYNRRVREIVEQ 147
+ P N EAA + ++ Y +V+E E+
Sbjct: 117 SDPFNGEAASLLMRDRAAYELKVKEYCEK 145
>AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 |
Ubiquitin-conjugating enzyme family protein |
chr3:4423828-4424797 REVERSE LENGTH=170
Length = 170
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KR+ R+ L DPP S P+ +N+ W A I GP TP++GG F L + F DYP K
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118
PP + F +R++H N+ G + ++IL++ WSP + +L +I+S+ P P
Sbjct: 99 PPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEP 150
>AT5G50870.2 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |
chr5:20699626-20700998 REVERSE LENGTH=203
Length = 203
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Query: 10 MRDFKRLQQD--------PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTE 61
M DF R+Q++ +GI P+ +N+ I GP TP++GGTF++ + +
Sbjct: 1 MIDFSRIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPD 60
Query: 62 DYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
YP +PP ++F ++++HPNI + G+ICLDIL++QWSP + L SIQ+LL P P
Sbjct: 61 GYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKD 120
Query: 121 PANSEAAR 128
P ++ A
Sbjct: 121 PQDAVVAE 128
>AT1G63800.1 | Symbols: UBC5 | ubiquitin-conjugating enzyme 5 |
chr1:23667888-23669003 REVERSE LENGTH=185
Length = 185
Score = 96.7 bits (239), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 88/150 (58%), Gaps = 8/150 (5%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIF-GPDDTPWDGGTFKLTLQF 59
MS+P+++R M K + D + N+ M V F GP D+ ++GG +K+ ++
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMI-----NDGMQEFFVEFSGPKDSIYEGGVWKIRVEL 55
Query: 60 TEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPN 117
+ YP K P+V F+++++HPN+ GS+CLD++ WSP++D+ + T + LL PN
Sbjct: 56 PDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPN 115
Query: 118 PNSPANSEAARMFSENKREYNRRVREIVEQ 147
P+ P N EAA + ++ Y +RV+E E+
Sbjct: 116 PSDPLNGEAAALMMRDRPTYEQRVKEYCEK 145
>AT3G55380.2 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |
chr3:20531520-20532895 FORWARD LENGTH=201
Length = 201
Score = 96.3 bits (238), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 48/179 (26%)
Query: 18 QDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM 76
+ P G S G + N+ W+ I GP DT ++GG F + F E+YP PPTV F S M
Sbjct: 19 KKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEM 78
Query: 77 FHPNIYADGSICLDILQ-------------NQWSPIYDVA-------------------- 103
+HPN+Y+DG +C+ IL +W+P++ +
Sbjct: 79 WHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTLVETDMFCSILSLYSDCFSNVR 138
Query: 104 --------------AILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 148
+I+ SI S+L PN SPAN EAA+ + +N+ E+ ++V V +S
Sbjct: 139 GIYKSGLRNTLEDKSIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRS 197
>AT5G41340.1 | Symbols: UBC4, ATUBC4 | ubiquitin conjugating enzyme
4 | chr5:16538296-16539956 REVERSE LENGTH=187
Length = 187
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 8/150 (5%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIF-GPDDTPWDGGTFKLTLQF 59
MS+P+++R M K + D N+ M V F GP D+ + GG +K+ ++
Sbjct: 1 MSSPSKRREMDMMKLMMSD-----YKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVEL 55
Query: 60 TEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPN 117
+ YP K P+V F+++++HPN+ GS+CLD++ WSP++D+ + T + LL PN
Sbjct: 56 PDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPN 115
Query: 118 PNSPANSEAARMFSENKREYNRRVREIVEQ 147
P+ P N EAA + ++ Y +RV+E E+
Sbjct: 116 PSDPLNGEAAALMMRDRPAYEQRVKEYCEK 145
>AT4G36800.2 | Symbols: RCE1 | RUB1 conjugating enzyme 1 |
chr4:17341237-17342148 REVERSE LENGTH=184
Length = 184
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 8 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKP 67
RL +D L IS +++M + I PDD + GTF T Q + YP++
Sbjct: 34 RLHKDISELNLPSSCSISFPNGKDDLMNFEVSI-KPDDGYYHNGTFVFTFQVSPVYPHEA 92
Query: 68 PTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAA 127
P V+ ++++HPNI +G++CL+IL+ W P+ ++ ++ + L +PN P N +AA
Sbjct: 93 PKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAA 152
Query: 128 RMFSENKREYNRRVREIVEQSWTA 151
+ +N + + VR + +
Sbjct: 153 AVLRDNPKLFETNVRRAMTGGYVG 176
>AT4G36800.1 | Symbols: RCE1 | RUB1 conjugating enzyme 1 |
chr4:17341237-17342148 REVERSE LENGTH=184
Length = 184
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 8 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKP 67
RL +D L IS +++M + I PDD + GTF T Q + YP++
Sbjct: 34 RLHKDISELNLPSSCSISFPNGKDDLMNFEVSI-KPDDGYYHNGTFVFTFQVSPVYPHEA 92
Query: 68 PTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAA 127
P V+ ++++HPNI +G++CL+IL+ W P+ ++ ++ + L +PN P N +AA
Sbjct: 93 PKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAA 152
Query: 128 RMFSENKREYNRRVREIVEQSWTA 151
+ +N + + VR + +
Sbjct: 153 AVLRDNPKLFETNVRRAMTGGYVG 176
>AT2G18600.1 | Symbols: | Ubiquitin-conjugating enzyme family
protein | chr2:8073337-8074565 REVERSE LENGTH=185
Length = 185
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 8 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKP 67
RL +D L IS N++M + I PD+ + G F + Q + YP++
Sbjct: 35 RLHKDISELNLPKSCKISFPNGKNDLMNFEVTI-KPDEGYYLSGNFVFSFQVSNMYPHEA 93
Query: 68 PTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAA 127
P V+ ++++HPNI +G++CL+IL+ W P+ ++ ++ + L +PN P N EAA
Sbjct: 94 PKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAA 153
Query: 128 RMFSENKREYNRRVR 142
+ +N + + VR
Sbjct: 154 AVLRDNPKTFEYNVR 168
>AT2G32790.1 | Symbols: | Ubiquitin-conjugating enzyme family
protein | chr2:13905649-13906271 REVERSE LENGTH=177
Length = 177
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGI---SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 57
+S A RL ++F+ ++D I S P NI W A + GP P++ G F +++
Sbjct: 26 VSKSAENRLWKEFQ--EKDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSV 83
Query: 58 QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 117
YP +PP + F +++FHPNI G I +DIL ++WS + +L SI S+L +P
Sbjct: 84 HIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDILGSRWSSALTINLVLLSICSILSNPV 143
Query: 118 PNSPANSEAARMFSENKREYNRRVRE 143
++ AAR++ ++++ Y + RE
Sbjct: 144 EPLLVSNHAARLYQKDRKAYEKVARE 169
>AT5G50430.2 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |
chr5:20534366-20536307 REVERSE LENGTH=243
Length = 243
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KRL ++++ L ++P + + P N+I+ W+ V+ G + TP+ GG + ++F +YP K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 67 PPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
PP + M PN ICL D W+P++ V++ILT + S + D NSP
Sbjct: 68 PPGI----TMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMD---NSP 120
Query: 122 ANSEAARMFSENKR 135
+E +R
Sbjct: 121 TTGSVNTSVAEKQR 134
>AT5G50430.1 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |
chr5:20534366-20536307 REVERSE LENGTH=243
Length = 243
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KRL ++++ L ++P + + P N+I+ W+ V+ G + TP+ GG + ++F +YP K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 67 PPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
PP + M PN ICL D W+P++ V++ILT + S + D NSP
Sbjct: 68 PPGI----TMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMD---NSP 120
Query: 122 ANSEAARMFSENKR 135
+E +R
Sbjct: 121 TTGSVNTSVAEKQR 134
>AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | Ubiquitin-conjugating
enzyme family protein | chr1:17031337-17032967 FORWARD
LENGTH=161
Length = 161
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
+S A RL ++ Q +PP G DN + W + G T + T++L ++F
Sbjct: 12 LSKIACNRLQKELSEWQLNPPTGFRHKVTDN-LQKWTIDVTGAPGTLYANETYQLQVEFP 70
Query: 61 EDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAIL 106
E YP + P V FVS HP+IY++G ICLDIL + WSP V ++
Sbjct: 71 EHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVC 117
>AT1G75440.1 | Symbols: UBC16 | ubiquitin-conjugating enzyme 16 |
chr1:28313623-28314960 FORWARD LENGTH=161
Length = 161
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
+S A RL ++ Q +PP G DN + W + G T + T++L + F
Sbjct: 12 LSKIATNRLQKELVEWQMNPPTGFKHKVTDN-LQRWIIEVIGAPGTLYANDTYQLQVDFP 70
Query: 61 EDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAI 105
E YP + P V F+ HP+IY++G ICLDIL + WSP V++I
Sbjct: 71 EHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSI 116
>AT1G17280.2 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |
chr1:5917146-5919162 REVERSE LENGTH=237
Length = 237
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KRL ++++ L ++P + + P N+I+ W+ V+ G + TP+ GG + ++F +YP K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 67 PPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
PP + M PN ICL D W+P++ V++ILT + S + D +P +
Sbjct: 68 PPGI----TMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTT 122
>AT1G17280.1 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |
chr1:5917146-5919162 REVERSE LENGTH=237
Length = 237
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KRL ++++ L ++P + + P N+I+ W+ V+ G + TP+ GG + ++F +YP K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 67 PPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
PP + M PN ICL D W+P++ V++ILT + S + D +P +
Sbjct: 68 PPGI----TMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTT 122
>AT4G36410.1 | Symbols: UBC17 | ubiquitin-conjugating enzyme 17 |
chr4:17201969-17202890 FORWARD LENGTH=161
Length = 161
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
++ A RL ++F Q +PP+G DN + W + G T + T++L ++F
Sbjct: 12 LTKIATNRLQKEFMEWQTNPPSGFKHRVSDN-LQRWIIEVHGVPGTLYANETYQLQVEFP 70
Query: 61 EDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAI 105
E YP + P V F HP+IY++G ICLD+L + WSP +++I
Sbjct: 71 EHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSI 116
>AT5G42990.1 | Symbols: UBC18 | ubiquitin-conjugating enzyme 18 |
chr5:17244206-17245904 REVERSE LENGTH=161
Length = 161
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 2 STPARK--------RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTF 53
S+P+RK RL ++ Q +PP G DN + W + G T + T+
Sbjct: 5 SSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDN-LQKWVIEVTGAPGTLYANETY 63
Query: 54 KLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAIL 106
L ++F + YP + P V FV HP+IY++G ICLDIL + WSP V+++
Sbjct: 64 NLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVC 117
>AT1G53025.1 | Symbols: | Ubiquitin-conjugating enzyme family
protein | chr1:19757072-19759474 REVERSE LENGTH=543
Length = 543
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 21/148 (14%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
K++ D+K L+ D P IS ++ + L AVI G + TP+ G F +QF + YP+
Sbjct: 274 KKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 333
Query: 67 PPTVRFVSRMF--HPNIYADGSICLDIL-------QNQWSPIYD-VAAILTSIQSLLCDP 116
PP V + S +PN+Y G +CL +L + +W P + +L SIQ+L+ +
Sbjct: 334 PPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNE 393
Query: 117 NP--NSPANSEAA---------RMFSEN 133
P N P ++A +++SEN
Sbjct: 394 KPYFNEPGYVQSAGTASGESKSKVYSEN 421
>AT3G17000.1 | Symbols: UBC32 | ubiquitin-conjugating enzyme 32 |
chr3:5797296-5799467 FORWARD LENGTH=309
Length = 309
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDY 63
PA KR++++ K +Q +P P + NI W I GP DT ++GG + +Q DY
Sbjct: 11 PAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 64 PNKPPTVRFVSRMFHPN--IYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNP 118
P KPP+ ++ PN + ICL I W P + V L ++ + + P
Sbjct: 71 PFKPPSFMLLT----PNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFM----P 122
Query: 119 NSPANSEAARMFSENKR 135
SP + + + +++R
Sbjct: 123 TSPNGALGSVDYPKDER 139
>AT2G16920.1 | Symbols: UBC23, PFU2 | ubiquitin-conjugating enzyme
23 | chr2:7334559-7338827 REVERSE LENGTH=1102
Length = 1102
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
K++ +D+K LQ + P GI ++ + L AVI G TP+ G F DYP+
Sbjct: 853 KKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSV 912
Query: 67 PPTVRFVSR--MFHPNIYADGSICLDILQNQWS----PIYD-----VAAILTSIQSLLCD 115
PP+ + S +PN+Y +G +CL +L N W+ ++D + +L S+Q L+ +
Sbjct: 913 PPSAYYHSGGWRLNPNLYEEGKVCLSLL-NTWTGRGNEVWDPKSSSILQVLVSLQGLVLN 971
Query: 116 PNP 118
P
Sbjct: 972 SKP 974
>AT1G53023.1 | Symbols: | Ubiquitin-conjugating enzyme family
protein | chr1:19754214-19755843 REVERSE LENGTH=316
Length = 316
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 21/148 (14%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
K + +++K L ++ P I ++ I L AVI G + TP+ G F +QF + YP+
Sbjct: 60 KDIQKEWKILDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 119
Query: 67 PPTVRFVS--RMFHPNIYADGSICLDIL-------QNQWSPIYD-VAAILTSIQSLLCDP 116
PP V + S +PN+Y G +CL ++ + +W P + +L SIQ+L+ +
Sbjct: 120 PPKVHYHSGGLRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNE 179
Query: 117 NP-----------NSPANSEAARMFSEN 133
P +P ++ +SEN
Sbjct: 180 KPYYNEPGYEKSMGTPLGESYSKDYSEN 207
>AT3G15355.1 | Symbols: UBC25, PFU1 | ubiquitin-conjugating enzyme
25 | chr3:5183858-5186669 FORWARD LENGTH=609
Length = 609
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KR+ +++ L++D P I ++ + L AVI G TP+ G F + F + YP+
Sbjct: 335 KRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPST 394
Query: 67 PPTVRFVSRMF--HPNIYADGSICLDIL-------QNQWSP-IYDVAAILTSIQSLLCDP 116
PP V + S +PN+Y G +CL +L + +W P + +L SIQ L+ +
Sbjct: 395 PPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQ 454
Query: 117 NP--NSPANSEAA 127
P N P +A
Sbjct: 455 KPYFNEPGYERSA 467
>AT5G50430.3 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |
chr5:20534366-20536307 REVERSE LENGTH=230
Length = 230
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 25/134 (18%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KRL ++++ L ++P + + P N+I+ W +G ++F +YP K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWRGFYYG-------------KIKFPPEYPYK 54
Query: 67 PPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
PP + M PN ICL D W+P++ V++ILT + S + D NSP
Sbjct: 55 PPGI----TMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMD---NSP 107
Query: 122 ANSEAARMFSENKR 135
+E +R
Sbjct: 108 TTGSVNTSVAEKQR 121
>AT2G36060.1 | Symbols: MMZ3, UEV1C | MMS ZWEI homologue 3 |
chr2:15143012-15143998 REVERSE LENGTH=145
Length = 145
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNN----IMLWNAVIFGPDDTPWDGGTFKLTLQ 58
P RL+ + +R ++ G D+ + W I GP +T +G ++L L
Sbjct: 11 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 70
Query: 59 FTEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDILQNQWSPIYDVAAILTSIQ 110
+DYP KPPTVRF SR+ + D + +L N W Y + ILT ++
Sbjct: 71 CDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLAN-WQRQYTMEDILTQLK 125
>AT2G36060.3 | Symbols: MMZ3, UEV1C | MMS ZWEI homologue 3 |
chr2:15143012-15143998 REVERSE LENGTH=144
Length = 144
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNN----IMLWNAVIFGPDDTPWDGGTFKLTLQ 58
P RL+ + +R ++ G D+ + W I GP +T +G ++L L
Sbjct: 11 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 70
Query: 59 FTEDYPNKPPTVRFVSRMFHPNIYADGSI---CLDILQNQWSPIYDVAAILTSIQ 110
+DYP KPPTVRF SR+ + D + +L N W Y + ILT ++
Sbjct: 71 CDKDYPEKPPTVRFHSRINMTCVNHDTGVDSKKFGVLAN-WQRQYTMEDILTQLK 124
>AT1G70660.2 | Symbols: MMZ2 | MMS ZWEI homologue 2 |
chr1:26640755-26641981 FORWARD LENGTH=148
Length = 148
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 3 TPARKRLMRDFKRLQQDPPAGISGAPQDN--NIML--WNAVIFGPDDTPWDGGTFKLTLQ 58
P RL+ + +R ++ G D+ +I++ W I GP +T ++G F+L L
Sbjct: 10 VPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLF 69
Query: 59 FTEDYPNKPPTVRFVSRM 76
+DYP PPTVRF SR+
Sbjct: 70 CGKDYPESPPTVRFQSRI 87
>AT1G70660.1 | Symbols: MMZ2, UEV1B | MMS ZWEI homologue 2 |
chr1:26640755-26641949 FORWARD LENGTH=159
Length = 159
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 3 TPARKRLMRDFKRLQQDPPAGISGAPQDN--NIML--WNAVIFGPDDTPWDGGTFKLTLQ 58
P RL+ + +R ++ G D+ +I++ W I GP +T ++G F+L L
Sbjct: 10 VPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLF 69
Query: 59 FTEDYPNKPPTVRFVSRM 76
+DYP PPTVRF SR+
Sbjct: 70 CGKDYPESPPTVRFQSRI 87
>AT1G70650.2 | Symbols: | Ran BP2/NZF zinc finger-like superfamily
protein | chr1:26638158-26641949 FORWARD LENGTH=595
Length = 595
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 4 PARKRLMRDFKRLQQDPPAGISGAPQDN--NIML--WNAVIFGPDDTPWDGGTFKLTLQF 59
P RL+ + +R ++ G D+ +I++ W I GP +T ++G F+L L
Sbjct: 447 PRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFC 506
Query: 60 TEDYPNKPPTVRFVSRM 76
+DYP PPTVRF SR+
Sbjct: 507 GKDYPESPPTVRFQSRI 523
>AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | phosphate 2 |
chr2:14277785-14281482 REVERSE LENGTH=907
Length = 907
Score = 49.7 bits (117), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
K++ +++ L+ + P I + + L A + G TP+ G F + YP++
Sbjct: 665 KKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHE 724
Query: 67 PPTVRFVS--RMFHPNIYADGSICLDILQNQWS 97
PP V + S +PN+Y G +CL +L N WS
Sbjct: 725 PPMVHYHSGGMRLNPNLYESGRVCLSLL-NTWS 756
>AT3G52560.1 | Symbols: UEV1D-4, MMZ4, UEV1D | ubiquitin E2 variant
1D-4 | chr3:19494678-19495954 REVERSE LENGTH=146
Length = 146
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNN----IMLWNAVIFGPDDTPWDGGTFKLTLQ 58
P RL+ + +R ++ G D+ + W I GP +T +G ++L L
Sbjct: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
Query: 59 FTEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDILQNQWSPIYDVAAILTSIQ 110
+DYP KPPTVRF SR+ + + + +L N W Y + IL ++
Sbjct: 72 CDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLAN-WQREYTMEDILVQLK 126