Miyakogusa Predicted Gene

Lj4g3v1614770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1614770.1 Non Chatacterized Hit- tr|K3Z7K0|K3Z7K0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si022520,35.43,0.000000000000001,HSP20-like chaperones,HSP20-like
chaperone; seg,NULL; HSP20,Alpha crystallin/Hsp20 domain; no
descri,NODE_52273_length_779_cov_10.717587.path2.1
         (233 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G27140.1 | Symbols:  | HSP20-like chaperones superfamily prot...    64   9e-11
AT5G20970.1 | Symbols:  | HSP20-like chaperones superfamily prot...    59   2e-09
AT5G04890.1 | Symbols: RTM2 | HSP20-like chaperones superfamily ...    56   2e-08
AT3G10680.1 | Symbols:  | HSP20-like chaperones superfamily prot...    52   3e-07
AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones superfa...    50   1e-06
AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily prot...    48   5e-06
AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily prot...    48   6e-06
AT4G21870.1 | Symbols:  | HSP20-like chaperones superfamily prot...    48   7e-06

>AT2G27140.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr2:11598496-11599264 REVERSE LENGTH=224
          Length = 224

 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 49/86 (56%)

Query: 29  EEIVPNSGWTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGERQANEQKRVHFQLVF 88
           +E  P S W  +     L + LP FRKE++K+QV +  ++ V G+R A   K + F+  F
Sbjct: 15  DEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDRPAGANKWIRFRKEF 74

Query: 89  PVPVDSDTDKLAGHFDGGILYVTVPK 114
           P+P + D D ++  F+G  L V +P+
Sbjct: 75  PIPPNIDVDSVSAKFEGANLVVRLPR 100


>AT5G20970.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr5:7123132-7124001 FORWARD LENGTH=249
          Length = 249

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%)

Query: 29  EEIVPNSGWTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGERQANEQKRVHFQLVF 88
           +E  P + WT +     L+ DLP F+KE++K+ V +  ++ + GER     K + F    
Sbjct: 11  QEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGERPTGGNKWIRFHQEI 70

Query: 89  PVPVDSDTDKLAGHFDGGILYVTVPKRVAE 118
           PVP+  D D ++  F    LY+  PK   E
Sbjct: 71  PVPLTVDIDSVSAMFKDNKLYIRHPKLKTE 100


>AT5G04890.1 | Symbols: RTM2 | HSP20-like chaperones superfamily
           protein | chr5:1427217-1428390 FORWARD LENGTH=366
          Length = 366

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 29  EEIVPNSGWTEDSAGHYLLVDLPEFRKEEVKLQ-VDSYGRIVVKGERQANEQKRVHFQLV 87
           E+ VP S W +      L +DL  F KE++K+  V S   I V GER    +K   F  V
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEV 76

Query: 88  FPVPVDSDTDKLAGHFDGGILYVTVPK 114
           F VP +   DK+ G F   +L +T+PK
Sbjct: 77  FTVPQNCLVDKIHGSFKNNVLTITMPK 103


>AT3G10680.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr3:3337773-3339345 FORWARD LENGTH=490
          Length = 490

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 16/130 (12%)

Query: 33  PNSGWTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIV-VKGERQANEQKRVHFQLVFPVP 91
           P + WT   +  +L V+LP F +++++++ D   R V ++G+R  + Q +  F   + VP
Sbjct: 28  PRAQWTNSGSSIFLYVNLPGFYRDQIEIKKDERTRTVQIQGQRPLSAQTKARFSEAYRVP 87

Query: 92  VDSDTDKLAGHFDGGILYVTVP---------------KRVAEEKNQESEAEKAGNGDVAE 136
              D  KL+  F  G+L +  P               +++ +  NQE       NG    
Sbjct: 88  DTCDMTKLSTSFSHGLLTIEFPAIVEANKQEKAVQDQEKIGQRSNQEKSGGPGPNGSTLG 147

Query: 137 AERAQEHDSH 146
            ++A E +  
Sbjct: 148 RKKALEEEKQ 157


>AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones
           superfamily protein | chr4:6370537-6371124 FORWARD
           LENGTH=195
          Length = 195

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 11/89 (12%)

Query: 37  WTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGERQANEQK------RVH-----FQ 85
           W E + GH +++D+P  +K+EVK++V+  G + V GER+  E+K      RV      F 
Sbjct: 75  WKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFW 134

Query: 86  LVFPVPVDSDTDKLAGHFDGGILYVTVPK 114
             F +P + D + +    + G+L + + K
Sbjct: 135 RQFKLPDNVDMESVKAKLENGVLTINLTK 163


>AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:2275148-2275621 FORWARD LENGTH=157
          Length = 157

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 11/89 (12%)

Query: 37  WTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGERQANEQKRV-----------HFQ 85
           W E +  H    DLP  +KEEVK++++    + + GER   ++++             F 
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 86  LVFPVPVDSDTDKLAGHFDGGILYVTVPK 114
             F +P +   D++    + G+L VTVPK
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPK 140


>AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19980510-19980983 FORWARD LENGTH=157
          Length = 157

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 12/95 (12%)

Query: 37  WTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGER-QANEQK-----RVH-----FQ 85
           W E    H    DLP  RKEEVK++V+    + + GER   NE+K     RV      F 
Sbjct: 54  WRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFT 113

Query: 86  LVFPVPVDSDTDKLAGHFDGGILYVTVPKRVAEEK 120
             F +P ++  +++    + G+L VTVPK V E+K
Sbjct: 114 RRFRLPENAKMEEIKASMENGVLSVTVPK-VPEKK 147


>AT4G21870.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr4:11603756-11604285 REVERSE LENGTH=134
          Length = 134

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%)

Query: 37  WTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGE---RQANEQKRVHFQLVFPVPVD 93
           W++    H   VDLP  RKEE+K++++    ++++ E       +Q    F+  F +P  
Sbjct: 30  WSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFRLPES 89

Query: 94  SDTDKLAGHFDGGILYVTVPKRVAEEK 120
            D   ++  ++ G+L V VPKR+   +
Sbjct: 90  IDMIGISAGYEDGVLTVIVPKRIMTRR 116