Miyakogusa Predicted Gene

Lj4g3v1614530.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1614530.3 tr|A9T6B9|A9T6B9_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,73.68,1e-18,SUBFAMILY NOT NAMED,NULL; ALR/ERV,NULL;
FAD-dependent thiol oxidase,Erv1/Alr; Evr1_Alr,Erv1/Alr; no
,CUFF.49547.3
         (175 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G49880.1 | Symbols: Erv1 | Erv1/Alr family protein | chr1:184...   226   5e-60

>AT1G49880.1 | Symbols: Erv1 | Erv1/Alr family protein |
           chr1:18464081-18465914 FORWARD LENGTH=191
          Length = 191

 Score =  226 bits (576), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 113/185 (61%), Positives = 137/185 (74%), Gaps = 17/185 (9%)

Query: 6   PLQALFHSFD--------HVSNFVGLH-----VQSSGRASLFSIKA--PLAKTTSSLQSG 50
           P Q L  SF+        H+SNF+G+       QS+ +  + S+ +  P+A  +SSLQ  
Sbjct: 5   PWQPLLQSFEKLSNCVQTHLSNFIGIKNTPPSSQSTIQNPIISLDSSPPIATNSSSLQKL 64

Query: 51  DNILKGKSAPPVTKEELGKATWTFLHTLAAQYPDNPTRQQKKDVKEHVQILTRLYPCKEC 110
              LK KS  PVTKE+LG+ATWTFLHTLAAQYP+ PTRQQKKDVKE + IL+R+YPC+EC
Sbjct: 65  P--LKDKSTGPVTKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCREC 122

Query: 111 ADHFKEVLRANPVQAESHAHFSHWLCHVHNVVNRSLGKPVFPCERVDARWGKLECEQKAC 170
           ADHFKE+LR+NP QA S   FS WLCHVHN VNRSLGK VFPCERVDARWGKLECEQK+C
Sbjct: 123 ADHFKEILRSNPAQAGSQEEFSQWLCHVHNTVNRSLGKLVFPCERVDARWGKLECEQKSC 182

Query: 171 EIIGS 175
           ++ G+
Sbjct: 183 DLHGT 187