Miyakogusa Predicted Gene

Lj4g3v1614530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1614530.1 Non Chatacterized Hit- tr|I1MIT7|I1MIT7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21483
PE,72.49,0,SUBFAMILY NOT NAMED,NULL; ALR/ERV,NULL; FAD-dependent thiol
oxidase,Erv1/Alr; Evr1_Alr,Erv1/Alr; no ,CUFF.49547.1
         (181 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G49880.1 | Symbols: Erv1 | Erv1/Alr family protein | chr1:184...   228   2e-60

>AT1G49880.1 | Symbols: Erv1 | Erv1/Alr family protein |
           chr1:18464081-18465914 FORWARD LENGTH=191
          Length = 191

 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/189 (60%), Positives = 139/189 (73%), Gaps = 17/189 (8%)

Query: 6   PLQALFHSFD--------HVSNFVGLH-----VQSSGRASLFSIKA--PLAKTTSSLQSG 50
           P Q L  SF+        H+SNF+G+       QS+ +  + S+ +  P+A  +SSLQ  
Sbjct: 5   PWQPLLQSFEKLSNCVQTHLSNFIGIKNTPPSSQSTIQNPIISLDSSPPIATNSSSLQKL 64

Query: 51  DNILKGKSAPPVTKEELGKATWTFLHTLAAQYPDNPTRQQKKDVKEHVQILTRLYPCKEC 110
              LK KS  PVTKE+LG+ATWTFLHTLAAQYP+ PTRQQKKDVKE + IL+R+YPC+EC
Sbjct: 65  P--LKDKSTGPVTKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCREC 122

Query: 111 ADHFKEVLRANPVQAESHAHFSHWLCHVHNVVNRSLGKPVFPCERVDARWGKLECEQKAC 170
           ADHFKE+LR+NP QA S   FS WLCHVHN VNRSLGK VFPCERVDARWGKLECEQK+C
Sbjct: 123 ADHFKEILRSNPAQAGSQEEFSQWLCHVHNTVNRSLGKLVFPCERVDARWGKLECEQKSC 182

Query: 171 EIIGSTSFF 179
           ++ G++  F
Sbjct: 183 DLHGTSMDF 191