Miyakogusa Predicted Gene

Lj4g3v1604510.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1604510.2 Non Chatacterized Hit- tr|I1MLU6|I1MLU6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45053
PE,74.15,0,seg,NULL; NEUROTR_ION_CHANNEL,Neurotransmitter-gated
ion-channel, conserved site; POP1,Ribonuclease ,CUFF.49544.2
         (849 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G47300.2 | Symbols:  | ribonuclease Ps | chr2:19418733-194220...   622   e-178
AT2G47300.3 | Symbols:  | ribonuclease Ps | chr2:19419333-194220...   411   e-114

>AT2G47300.2 | Symbols:  | ribonuclease Ps | chr2:19418733-19422076
           FORWARD LENGTH=826
          Length = 826

 Score =  622 bits (1604), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 379/857 (44%), Positives = 516/857 (60%), Gaps = 90/857 (10%)

Query: 7   RKPQGSVPIPPRKINVQKYAKSRAPELLSLQSIVENRLNNNYSSQRNKRRRTTAFDSQIA 66
           ++  G   + PRKINVQK++++RAPEL SL SIV  RLN ++ S+RNKRRRT ++++Q A
Sbjct: 11  KRDGGLSSLAPRKINVQKFSEARAPELESLHSIVSERLNKDFRSKRNKRRRTNSYNNQPA 70

Query: 67  RKGGNRKRQK----LGTVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTSGDGT 122
           +K  N KRQK    +G V           D   K+ R ++RR ELK NPE GFCTSGDGT
Sbjct: 71  KKR-NIKRQKSQSLIGQVSGG--------DHEVKITRRVKRRMELKGNPETGFCTSGDGT 121

Query: 123 KRLRTHVWHAKRFAMTKLWGYNLPLGFQGRGKGSRAVLKRFKEGVLLHDSSYYTAVQLEG 182
           KRLRTHVWHAKRF MTKLWG++LPLG  GRG+GSR VLK+ ++GVL+HD+SY+ AVQLEG
Sbjct: 122 KRLRTHVWHAKRFTMTKLWGFHLPLGLHGRGRGSRDVLKQSRQGVLVHDASYHIAVQLEG 181

Query: 183 PEDSLVSVLRMVLLPSLETETPGNHDFSVLSGITYGTAMLYQVGAPVSQPIAPVTYIWRP 242
           PE SL+S+L M+L PS  + +    D S+L+G +Y  AMLY V  PVSQ IAPVTY+WRP
Sbjct: 182 PEGSLLSILNMLLEPSPSSHSKEVFD-SILTGGSYENAMLYHVEPPVSQAIAPVTYMWRP 240

Query: 243 T-FPQNTSTELDGRNHHTSLSQHDINDNLSNHDADLCEKSDVMKCGSSFRHIWVWIHASA 301
           +  P+  + E  G    T L   D      +H+               FR +WVWIHAS+
Sbjct: 241 SKIPKRRNEEKGGDGIGTDLPVSD-----KDHE--------------DFRKLWVWIHASS 281

Query: 302 FEEGYDSLKFACQKEMEKSGVLINCLSLEGQLGKLELMGSQTFNLLQKILHPVSSISENH 361
           F EGY  LK ACQK+M ++GV ++C SLEGQL KLE+ GS+  +LLQK LHP +S SEN 
Sbjct: 282 FSEGYAILKVACQKQMNETGVSVDCFSLEGQLAKLEIFGSKASHLLQKTLHPATSTSENP 341

Query: 362 WQLKKHVAIEEDSVSPSIKSSILKSEEHFSSHAMLSLNVTDPRELL----GKRTITPTEP 417
             L+K  ++E+  V      + L +EE+ SS A+L+  V DPR +L      RT++  E 
Sbjct: 342 SILRK-CSMEKAEVK---NVADLYTEENVSSGAILAQFVIDPRLILTSPHDDRTVS-VET 396

Query: 418 ISTEARSDAQETNNNELANLGGKFENNKGLSSLSWSKLVDSQSNVDDLWDASTTGLRPPV 477
           I TE     + T N E       F                     + LWDA++  L PP 
Sbjct: 397 IKTEPTESVETTTNTEAETFPEVF---------------------NCLWDANSE-LTPPE 434

Query: 478 EDSVLAKEKHCERMVNFCLDDIESGEANSSTKVRCSRSCPIVLLKNDMK-DLSIGWSIIL 536
           E+++L  EKH  RM + CLDD  +     S++ R SRSCP++LLK+    +   GWS+IL
Sbjct: 435 EENMLCWEKHQSRMDSLCLDDPAAEVPKVSSRPRSSRSCPLLLLKHKKLGNAPTGWSLIL 494

Query: 537 PLSWVKAFWIPLISNGAHAIGLREKHWIACEIELPSFPSDFPDCKAYSCQMAAKDAVFNK 596
           PLSW+K FW   +S GAHAIG REK W++C+  LP FPSDFPDCKAYS    ++ A   +
Sbjct: 495 PLSWIKVFWNAFVSKGAHAIGQREKRWVSCDDGLPFFPSDFPDCKAYSSFTLSEAADLEE 554

Query: 597 KEELRPPSVRRFKVPILPPWGIVRTTFNKEISAMXXXXXXXXXXXXXANSLPISFSGSSK 656
           K + RPP++R F++PI PPW  +  T                      ++   S +G S 
Sbjct: 555 KAQRRPPAIRPFRIPIPPPWNSIHVT----------------RSIGEGSNQKFSSNGRSV 598

Query: 657 ISNFNCMNNSFDGTIARTGNMLTTFINETKAGQLLLFPHVAE--GKDIISKFIKGEQNLD 714
           +   +   N FDG +ART + LTTF+    +  +LLFPH       D++    + ++ + 
Sbjct: 599 VEISSYGGNLFDGIVARTSDSLTTFLQTFTSDNMLLFPHNTSKPSTDLMMTLQEDDKKVR 658

Query: 715 L-MHKSSVIYDHKLCFLRVILHPFKEGVFKEGAVICAPCLSDISMW-TXXXXXXXXXXXX 772
             +H+SS    +KLC +RV+LH FKEG F+EGAV+CAP L+DIS+  +            
Sbjct: 659 AQIHQSS----NKLCLVRVLLHAFKEGSFEEGAVVCAPTLADISLLKSSCSEGEDGRVTI 714

Query: 773 XXXAMKLYFKEHSSGKWGMQIPEDSIARASHRWPIGFVTTASVQGSKRLVAEGFCEAVLL 832
              ++  YF+E   G W + +PED++   SHRWPIGFVTT  V+GSK+  AE FC+AVLL
Sbjct: 715 PQSSVSSYFQEQPCGTWELNVPEDTLTEQSHRWPIGFVTTGFVRGSKKPAAEAFCDAVLL 774

Query: 833 SHLREEQWKEMPVKQRR 849
             LR+EQW++  V++R+
Sbjct: 775 GRLRDEQWRDKDVRRRK 791


>AT2G47300.3 | Symbols:  | ribonuclease Ps | chr2:19419333-19422076
           FORWARD LENGTH=659
          Length = 659

 Score =  411 bits (1057), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 275/682 (40%), Positives = 385/682 (56%), Gaps = 80/682 (11%)

Query: 178 VQLEGPEDSLVSVLRMVLLPSLETETPGNHDFSVLSGITYGTAMLYQVGAPVSQPIAPVT 237
           VQ +G   SL+S+L M+L PS  + +    D S+L+G +Y  AMLY V  PVSQ IAPVT
Sbjct: 13  VQRQG---SLLSILNMLLEPSPSSHSKEVFD-SILTGGSYENAMLYHVEPPVSQAIAPVT 68

Query: 238 YIWRPT-FPQNTSTELDGRNHHTSLSQHDINDNLSNHDADLCEKSDVMKCGSSFRHIWVW 296
           Y+WRP+  P+  + E  G    T L   D      +H+               FR +WVW
Sbjct: 69  YMWRPSKIPKRRNEEKGGDGIGTDLPVSD-----KDHE--------------DFRKLWVW 109

Query: 297 IHASAFEEGYDSLKFACQKEMEKSGVLINCLSLEGQLGKLELMGSQTFNLLQKILHPVSS 356
           IHAS+F EGY  LK ACQK+M ++GV ++C SLEGQL KLE+ GS+  +LLQK LHP +S
Sbjct: 110 IHASSFSEGYAILKVACQKQMNETGVSVDCFSLEGQLAKLEIFGSKASHLLQKTLHPATS 169

Query: 357 ISENHWQLKKHVAIEEDSVSPSIKSSILKSEEHFSSHAMLSLNVTDPRELL----GKRTI 412
            SEN   L+K  ++E+  V      + L +EE+ SS A+L+  V DPR +L      RT+
Sbjct: 170 TSENPSILRK-CSMEKAEVK---NVADLYTEENVSSGAILAQFVIDPRLILTSPHDDRTV 225

Query: 413 TPTEPISTEARSDAQETNNNELANLGGKFENNKGLSSLSWSKLVDSQSNVDDLWDASTTG 472
           +  E I TE     + T N E       F                     + LWDA++  
Sbjct: 226 S-VETIKTEPTESVETTTNTEAETFPEVF---------------------NCLWDANSE- 262

Query: 473 LRPPVEDSVLAKEKHCERMVNFCLDDIESGEANSSTKVRCSRSCPIVLLKNDMK-DLSIG 531
           L PP E+++L  EKH  RM + CLDD  +     S++ R SRSCP++LLK+    +   G
Sbjct: 263 LTPPEEENMLCWEKHQSRMDSLCLDDPAAEVPKVSSRPRSSRSCPLLLLKHKKLGNAPTG 322

Query: 532 WSIILPLSWVKAFWIPLISNGAHAIGLREKHWIACEIELPSFPSDFPDCKAYSCQMAAKD 591
           WS+ILPLSW+K FW   +S GAHAIG REK W++C+  LP FPSDFPDCKAYS    ++ 
Sbjct: 323 WSLILPLSWIKVFWNAFVSKGAHAIGQREKRWVSCDDGLPFFPSDFPDCKAYSSFTLSEA 382

Query: 592 AVFNKKEELRPPSVRRFKVPILPPWGIVRTTFNKEISAMXXXXXXXXXXXXXANSLPISF 651
           A   +K + RPP++R F++PI PPW  +  T                      ++   S 
Sbjct: 383 ADLEEKAQRRPPAIRPFRIPIPPPWNSIHVT----------------RSIGEGSNQKFSS 426

Query: 652 SGSSKISNFNCMNNSFDGTIARTGNMLTTFINETKAGQLLLFPHVAE--GKDIISKFIKG 709
           +G S +   +   N FDG +ART + LTTF+    +  +LLFPH       D++    + 
Sbjct: 427 NGRSVVEISSYGGNLFDGIVARTSDSLTTFLQTFTSDNMLLFPHNTSKPSTDLMMTLQED 486

Query: 710 EQNLDL-MHKSSVIYDHKLCFLRVILHPFKEGVFKEGAVICAPCLSDISMW-TXXXXXXX 767
           ++ +   +H+SS    +KLC +RV+LH FKEG F+EGAV+CAP L+DIS+  +       
Sbjct: 487 DKKVRAQIHQSS----NKLCLVRVLLHAFKEGSFEEGAVVCAPTLADISLLKSSCSEGED 542

Query: 768 XXXXXXXXAMKLYFKEHSSGKWGMQIPEDSIARASHRWPIGFVTTASVQGSKRLVAEGFC 827
                   ++  YF+E   G W + +PED++   SHRWPIGFVTT  V+GSK+  AE FC
Sbjct: 543 GRVTIPQSSVSSYFQEQPCGTWELNVPEDTLTEQSHRWPIGFVTTGFVRGSKKPAAEAFC 602

Query: 828 EAVLLSHLREEQWKEMPVKQRR 849
           +AVLL  LR+EQW++  V++R+
Sbjct: 603 DAVLLGRLRDEQWRDKDVRRRK 624