Miyakogusa Predicted Gene

Lj4g3v1600400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1600400.1 Non Chatacterized Hit- tr|I0YRN8|I0YRN8_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,41.18,8e-17,Wbp11,WW domain binding protein 11; coiled-coil,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NUL,CUFF.49462.1
         (533 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62640.1 | Symbols: ELF5 | proline-rich family protein | chr5...   136   5e-32
AT5G62640.2 | Symbols: ELF5 | proline-rich family protein | chr5...   130   2e-30
AT5G62640.3 | Symbols:  | proline-rich family protein | chr5:251...   114   2e-25

>AT5G62640.1 | Symbols: ELF5 | proline-rich family protein |
           chr5:25149584-25152351 REVERSE LENGTH=520
          Length = 520

 Score =  136 bits (342), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/174 (48%), Positives = 96/174 (55%), Gaps = 8/174 (4%)

Query: 1   MNPTDAYXXXXXXXXXXXXXXXXXXXXXXGILKKDPEQLKKQIDNLEMMKADGALDKARK 60
           MNPTDAY                      GILKKDPEQ+K QI  L+M KA+GALDKARK
Sbjct: 10  MNPTDAYRKQIRKREIKRNKKERQKVREVGILKKDPEQIKDQIRKLDMSKAEGALDKARK 69

Query: 61  HKKRQLQDTLNLDVKKRREYEDKMKEKGE--TPVMFSHLGPPXXXXXXXXXXXVNHPKPE 118
           HKKRQL+DTL + VKKR+EY++K KE+GE  T VMFSHL P                KPE
Sbjct: 70  HKKRQLEDTLKMVVKKRKEYDEKKKEQGEATTSVMFSHLPPQRRLTGEEDL------KPE 123

Query: 119 DSVYYHPTLNXXXXXXXXXXXMFVSSIGPRIPLSGXXXXXXXXXXXTESENDVL 172
           DSVYYHPTLN           M+ SSIG  I   G           TESE+ VL
Sbjct: 124 DSVYYHPTLNPTGAPPPGKPPMYNSSIGLAISSDGASSSSAALSSITESEDSVL 177



 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/113 (55%), Positives = 74/113 (65%), Gaps = 10/113 (8%)

Query: 427 LRQLPPQKPSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRREAAMIKTKPKP------ 480
           +R   P KPS+VKSAA TVV+RPLAQHTPELT+M+PASVRVRRE+A + TKPKP      
Sbjct: 412 IRPYVPNKPSFVKSAAPTVVRRPLAQHTPELTSMVPASVRVRRESATV-TKPKPKTSIAS 470

Query: 481 SLPTTSRTVSGKSGPTNXXXXXXXXXXXXXXXXIDDSYSAFLEDMKALGALDG 533
           SL  T R ++  +                    IDDSY+AFLEDMKALGALDG
Sbjct: 471 SLSFTPRAMASAA---TVKVEPAKTSAASKPQSIDDSYTAFLEDMKALGALDG 520


>AT5G62640.2 | Symbols: ELF5 | proline-rich family protein |
           chr5:25149584-25152351 REVERSE LENGTH=514
          Length = 514

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/130 (55%), Positives = 81/130 (62%), Gaps = 8/130 (6%)

Query: 1   MNPTDAYXXXXXXXXXXXXXXXXXXXXXXGILKKDPEQLKKQIDNLEMMKADGALDKARK 60
           MNPTDAY                      GILKKDPEQ+K QI  L+M KA+GALDKARK
Sbjct: 10  MNPTDAYRKQIRKREIKRNKKERQKVREVGILKKDPEQIKDQIRKLDMSKAEGALDKARK 69

Query: 61  HKKRQLQDTLNLDVKKRREYEDKMKEKGE--TPVMFSHLGPPXXXXXXXXXXXVNHPKPE 118
           HKKRQL+DTL + VKKR+EY++K KE+GE  T VMFSHL P                KPE
Sbjct: 70  HKKRQLEDTLKMVVKKRKEYDEKKKEQGEATTSVMFSHLPPQRRLTGEEDL------KPE 123

Query: 119 DSVYYHPTLN 128
           DSVYYHPTLN
Sbjct: 124 DSVYYHPTLN 133



 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/113 (55%), Positives = 74/113 (65%), Gaps = 10/113 (8%)

Query: 427 LRQLPPQKPSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRREAAMIKTKPKP------ 480
           +R   P KPS+VKSAA TVV+RPLAQHTPELT+M+PASVRVRRE+A + TKPKP      
Sbjct: 406 IRPYVPNKPSFVKSAAPTVVRRPLAQHTPELTSMVPASVRVRRESATV-TKPKPKTSIAS 464

Query: 481 SLPTTSRTVSGKSGPTNXXXXXXXXXXXXXXXXIDDSYSAFLEDMKALGALDG 533
           SL  T R ++  +                    IDDSY+AFLEDMKALGALDG
Sbjct: 465 SLSFTPRAMASAA---TVKVEPAKTSAASKPQSIDDSYTAFLEDMKALGALDG 514


>AT5G62640.3 | Symbols:  | proline-rich family protein |
           chr5:25149584-25152351 REVERSE LENGTH=540
          Length = 540

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/145 (51%), Positives = 84/145 (57%), Gaps = 13/145 (8%)

Query: 30  GILKKDPEQLKKQIDNLEMMKADGALDKARKHKKRQLQDTLNLDVKKRREYEDKMKEKGE 89
           GILKKDPEQ+K QI  L+M KA+GALDKARKHKKRQL+DTL     K  EY++K KE+GE
Sbjct: 64  GILKKDPEQIKDQIRKLDMSKAEGALDKARKHKKRQLEDTL-----KMVEYDEKKKEQGE 118

Query: 90  --TPVMFSHLGPPXXXXXXXXXXXVNHPKPEDSVYYHPTLNXXXXXXXXXXXMFVSSIGP 147
             T VMFSHL P                KPEDSVYYHPTLN           M+ SSIG 
Sbjct: 119 ATTSVMFSHLPPQRRLTGEEDL------KPEDSVYYHPTLNPTGAPPPGKPPMYNSSIGL 172

Query: 148 RIPLSGXXXXXXXXXXXTESENDVL 172
            I   G           TESE+ VL
Sbjct: 173 AISSDGASSSSAALSSITESEDSVL 197



 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/113 (55%), Positives = 74/113 (65%), Gaps = 10/113 (8%)

Query: 427 LRQLPPQKPSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRREAAMIKTKPKP------ 480
           +R   P KPS+VKSAA TVV+RPLAQHTPELT+M+PASVRVRRE+A + TKPKP      
Sbjct: 432 IRPYVPNKPSFVKSAAPTVVRRPLAQHTPELTSMVPASVRVRRESATV-TKPKPKTSIAS 490

Query: 481 SLPTTSRTVSGKSGPTNXXXXXXXXXXXXXXXXIDDSYSAFLEDMKALGALDG 533
           SL  T R ++  +                    IDDSY+AFLEDMKALGALDG
Sbjct: 491 SLSFTPRAMASAA---TVKVEPAKTSAASKPQSIDDSYTAFLEDMKALGALDG 540