Miyakogusa Predicted Gene

Lj4g3v1599320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1599320.1 Non Chatacterized Hit- tr|G7JCA6|G7JCA6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35.71,5e-18,FAMILY NOT NAMED,NULL; coiled-coil,NULL;
seg,NULL,CUFF.49460.1
         (457 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18950.1 | Symbols:  | DDT domain superfamily | chr1:6546539-...   286   2e-77
AT5G25580.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...    50   3e-06

>AT1G18950.1 | Symbols:  | DDT domain superfamily |
           chr1:6546539-6551549 FORWARD LENGTH=750
          Length = 750

 Score =  286 bits (732), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 198/469 (42%), Positives = 257/469 (54%), Gaps = 33/469 (7%)

Query: 1   MIGHRLYREIRKTEVVQMKKGKARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRT 60
           +IGHRLYREIRK EV+++K    +GS++L + +YQWE VATNFDEFQDVSEKL  S +R 
Sbjct: 295 LIGHRLYREIRKAEVLKVK---TKGSKILPNITYQWETVATNFDEFQDVSEKLLQSSSRI 351

Query: 61  EALVGKKLKIDMLPEIEXXXXXXXXXXXXXXXXXXXXDNYLVMDGFGPGRSLRDRKSVTY 120
           E  +GKKL  DMLPEIE                    DN++V+DG   GRSLRDRK V Y
Sbjct: 352 EVSLGKKLVKDMLPEIEKEHKRKEKLLKKQHRQALLLDNFVVVDGLA-GRSLRDRKPVRY 410

Query: 121 TFDDYDRSISEAIKVTKQKQPSPE-PMRRRESVAKTEALTNGNHGPSHVAAQHLNFGMXX 179
           TFDDYD+SI++AIK+TK+K PSPE P+ RRES A+ +AL NG    S    + +N     
Sbjct: 411 TFDDYDKSINDAIKITKKKHPSPEHPLHRRES-ARLDALANGRSTSSTHPTEPVNDTASG 469

Query: 180 XXXXXXXXXXXXXHKTDAXXXXXXXXXPKRYSENDSIEEGPGNEAGFDSDDDIVGEVVYD 239
                        H+ D          P+RYS  D +E    NE  F SDDDI GE VYD
Sbjct: 470 RSSDFADYDDFDEHR-DESLDRRRRQRPQRYSATDFVETVSDNEVEFQSDDDIYGEAVYD 528

Query: 240 EEYLKKRKQRRDIXXXXXXXXXXXXXXXXXXYNLXXXXXXXXXXXXXXXXXXXXXXXXKP 299
           EEYLKKRKQ++ +                   +                         +P
Sbjct: 529 EEYLKKRKQKK-LSSGSEGDEEKGDEEYKWDEDNAEYEEEEEEEEEEDSLSASEEDSDEP 587

Query: 300 RKVKQLPGRTRRETKRRS-VDEIQSGLRRSKRATRNTINYQQYELSESETEVTKPEKSDA 358
           R+ K++P   RRETK RS  ++ + GLRRSKRATR  I+YQQYE S+S+ E T   K   
Sbjct: 588 RRAKKMP---RRETKLRSRSNDFRPGLRRSKRATR--IDYQQYEFSDSDKEATGLAKRKR 642

Query: 359 SGDHSDPSE---NGEYMSESEGSGNDGEDHEMK---------VDEPVTFPAVEEENELNQ 406
             +  +PS+   NG++   S+ S  +  D E K         V++       +E N+LN+
Sbjct: 643 FVEPDEPSDETGNGDFTMGSQDSEENANDPETKSGEEEEPRDVNDNADTTNGKENNQLNK 702

Query: 407 PAAEKLSSPGQEEAEG-MGKRRFLDLNELAPSPGFDDGPIPDTIMKDED 454
                  +  QEE EG +GKRR+LDLNELAP  GFDDG  P T++KD+D
Sbjct: 703 SNG----TTDQEEVEGVVGKRRYLDLNELAPVSGFDDG--PSTVLKDDD 745


>AT5G25580.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: DDT domain superfamily (TAIR:AT1G18950.1); Has 178
           Blast hits to 178 proteins in 75 species: Archae - 0;
           Bacteria - 4; Metazoa - 51; Fungi - 33; Plants - 60;
           Viruses - 1; Other Eukaryotes - 29 (source: NCBI BLink).
           | chr5:8903550-8906108 FORWARD LENGTH=405
          Length = 405

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 18/138 (13%)

Query: 3   GHRLYREIRKTEVVQMKKGKARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTEA 62
           G+RLYRE+        KK        LS     WE  ATN DEFQ V+ +L SSK  + A
Sbjct: 212 GYRLYREVNGIS----KKNAGSDLSCLS-----WETEATNLDEFQSVARELSSSKASSLA 262

Query: 63  LVGKKLKIDMLPEIEXXXXXXXXXXXXXXXXXXXXDNYLVMDGFG----PGRSLRDRKSV 118
             G+ ++ + +P +E                    +  +V   F       RS R+    
Sbjct: 263 ATGQMIETEAIPVVE-----KYHKKRERAIKKKMKEEMVVNVNFSRPLRTTRSCRNHMPA 317

Query: 119 TYTFDDYDRSISEAIKVT 136
           TYTFD+YD+ IS+A++ T
Sbjct: 318 TYTFDEYDKMISDAVEET 335