Miyakogusa Predicted Gene
- Lj4g3v1598230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1598230.1 Non Chatacterized Hit- tr|I3SAA0|I3SAA0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.64,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; BASIC,CUFF.49444.1
(220 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P | chr1:21... 214 3e-56
AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 189 8e-49
AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P | chr1:219... 167 4e-42
AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 157 6e-39
AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 152 1e-37
AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 147 4e-36
AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 143 8e-35
AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 143 8e-35
AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 143 8e-35
AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting basic-hel... 142 2e-34
AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 140 5e-34
AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 139 2e-33
AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 139 2e-33
AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 138 3e-33
AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 138 3e-33
AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 138 3e-33
AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17... 136 1e-32
AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17... 136 1e-32
AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 135 2e-32
AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 135 3e-32
AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 135 3e-32
AT2G18300.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 134 3e-32
AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 133 9e-32
AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 | chr1:63... 127 5e-30
AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27... 127 8e-30
AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27... 127 8e-30
AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 122 2e-28
AT3G57800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 112 2e-25
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 91 9e-19
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 90 1e-18
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 90 1e-18
AT2G42300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 84 5e-17
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 73 1e-13
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 73 1e-13
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 73 1e-13
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 73 1e-13
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 73 1e-13
AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 3e-12
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 9e-12
AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 1e-11
AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 1e-11
AT2G43140.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 2e-11
AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-l... 65 3e-11
AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 3e-11
AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 3e-11
AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 65 4e-11
AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 65 4e-11
AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | chr... 65 4e-11
AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 65 5e-11
AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 5e-11
AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 5e-11
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 7e-11
AT1G05805.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 8e-11
AT2G43140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 9e-11
AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 | chr... 63 1e-10
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 63 2e-10
AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 2e-10
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 62 4e-10
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 1e-09
AT3G59060.1 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 60 1e-09
AT3G59060.4 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 60 2e-09
AT3G59060.3 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 60 2e-09
AT3G59060.2 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 60 2e-09
AT2G43010.1 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interact... 59 2e-09
AT2G43010.2 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interact... 59 2e-09
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 2e-09
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 59 2e-09
AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 56 2e-08
AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 | chr1:247953... 54 8e-08
AT2G14760.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 1e-07
AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 | chr5:1503... 54 1e-07
AT5G61270.2 | Symbols: PIF7 | phytochrome-interacting factor7 | ... 52 3e-07
AT5G61270.1 | Symbols: PIF7 | phytochrome-interacting factor7 | ... 52 3e-07
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 52 4e-07
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 52 4e-07
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 52 4e-07
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 50 9e-07
AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-12896... 50 1e-06
AT1G69010.1 | Symbols: BIM2 | BES1-interacting Myc-like protein ... 49 3e-06
AT4G28811.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 47 9e-06
>AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P |
chr1:21909464-21911030 REVERSE LENGTH=264
Length = 264
Score = 214 bits (546), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/135 (78%), Positives = 117/135 (86%), Gaps = 3/135 (2%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS
Sbjct: 132 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 191
Query: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDVGTQPFDLAGIIFGSQASRGYAQGSQPG 206
LQ QVEFLSMKLEAVNSR MNP I+ F K+ G Q F+ I FGSQ++R Y++G+ P
Sbjct: 192 LQRQVEFLSMKLEAVNSR--MNPGIEVFPPKEFGQQAFENPEIQFGSQSTREYSRGASPE 249
Query: 207 WLHMQI-TGGFEKTT 220
WLHMQI +GGFE+T+
Sbjct: 250 WLHMQIGSGGFERTS 264
>AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:25133117-25134600 REVERSE
LENGTH=281
Length = 281
Score = 189 bits (481), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 104/134 (77%), Gaps = 1/134 (0%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATD HSLAERARREKISE+M LQD++PGCNK+IGKALVLDEIINYIQS
Sbjct: 149 DYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQS 208
Query: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDVGTQPFDLAGIIFGSQASRGYAQGSQPG 206
LQ QVEFLSMKLE VNS + PTI F S D+GT P D+ I+ Q + + SQP
Sbjct: 209 LQRQVEFLSMKLEVVNSGASTGPTIGVFPSGDLGTLPIDVHRTIYEQQEA-NETRVSQPE 267
Query: 207 WLHMQITGGFEKTT 220
WLHMQ+ G F +TT
Sbjct: 268 WLHMQVDGNFNRTT 281
>AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P |
chr1:21909635-21911030 REVERSE LENGTH=343
Length = 343
Score = 167 bits (424), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/93 (90%), Positives = 86/93 (92%), Gaps = 2/93 (2%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS
Sbjct: 132 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 191
Query: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDV 179
LQ QVEFLSMKLEAVNSR MNP I+ F K+V
Sbjct: 192 LQRQVEFLSMKLEAVNSR--MNPGIEVFPPKEV 222
>AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:2341188-2343288 REVERSE
LENGTH=456
Length = 456
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 82/93 (88%), Gaps = 2/93 (2%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QS
Sbjct: 254 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 313
Query: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDV 179
LQ QVEFLSMKL +VN+R + N +D SKD+
Sbjct: 314 LQRQVEFLSMKLSSVNTRLDFN--MDALLSKDI 344
>AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:19684160-19686871 FORWARD
LENGTH=498
Length = 498
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 81/94 (86%), Gaps = 3/94 (3%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGCNKV GKAL+LDEIINY+QS
Sbjct: 297 DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 356
Query: 147 LQHQVEFLSMKLEAVN-SRFNMNPTIDCFSSKDV 179
LQ QVEFLSMKL +VN +R + N +D SKDV
Sbjct: 357 LQRQVEFLSMKLSSVNDTRLDFN--VDALVSKDV 388
>AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:8528933-8530655 REVERSE
LENGTH=371
Length = 371
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 77/87 (88%), Gaps = 2/87 (2%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATDSHSLAERARREKISERM +LQDLVPGCN++ GKA++LDEIINY+QS
Sbjct: 187 DYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQS 246
Query: 147 LQHQVEFLSMKLEAVNSR--FNMNPTI 171
LQ QVEFLSMKL VN R FN N ++
Sbjct: 247 LQRQVEFLSMKLATVNPRMEFNANASL 273
>AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 72/81 (88%)
Query: 88 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 147
YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSL
Sbjct: 300 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 359
Query: 148 QHQVEFLSMKLEAVNSRFNMN 168
Q QVEFLSMKL VN + + N
Sbjct: 360 QRQVEFLSMKLATVNPQMDFN 380
>AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 72/81 (88%)
Query: 88 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 147
YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSL
Sbjct: 300 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 359
Query: 148 QHQVEFLSMKLEAVNSRFNMN 168
Q QVEFLSMKL VN + + N
Sbjct: 360 QRQVEFLSMKLATVNPQMDFN 380
>AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=485
Length = 485
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 72/81 (88%)
Query: 88 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 147
YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSL
Sbjct: 299 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 358
Query: 148 QHQVEFLSMKLEAVNSRFNMN 168
Q QVEFLSMKL VN + + N
Sbjct: 359 QRQVEFLSMKLATVNPQMDFN 379
>AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting
basic-helix-loop-helix 1 | chr4:16498466-16499946
FORWARD LENGTH=335
Length = 335
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 82/100 (82%), Gaps = 6/100 (6%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 147 LQHQVEFLSMKLEAVNSR--FNMNPTIDCFSSKDVGTQPF 184
LQ Q+EFLSMKL VN R F+M+ D F +K+V + P
Sbjct: 228 LQRQIEFLSMKLAIVNPRPDFDMD---DIF-AKEVASTPM 263
>AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3304228-3305984 REVERSE
LENGTH=366
Length = 366
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 80/93 (86%), Gaps = 2/93 (2%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
+YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QS
Sbjct: 202 NYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 261
Query: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDV 179
LQ QVEFLSMKL VN N++ ID +KD+
Sbjct: 262 LQQQVEFLSMKLATVNPEINID--IDRILAKDL 292
>AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:20710764-20712252 REVERSE
LENGTH=286
Length = 286
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 82/108 (75%), Gaps = 14/108 (12%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATDSHSLAER RREKISERM+ LQ+LVPGC+KV GKAL+LDEIINY+Q+
Sbjct: 132 DYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQT 191
Query: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDVGTQPFDLAGIIFGSQ 194
LQ QVEFLSMKL ++ +P + F S DL G+I S+
Sbjct: 192 LQTQVEFLSMKLTSI------SPVVYDFGS--------DLDGLILQSE 225
>AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:20710764-20712252 REVERSE
LENGTH=286
Length = 286
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 82/108 (75%), Gaps = 14/108 (12%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATDSHSLAER RREKISERM+ LQ+LVPGC+KV GKAL+LDEIINY+Q+
Sbjct: 132 DYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQT 191
Query: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDVGTQPFDLAGIIFGSQ 194
LQ QVEFLSMKL ++ +P + F S DL G+I S+
Sbjct: 192 LQTQVEFLSMKLTSI------SPVVYDFGS--------DLDGLILQSE 225
>AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=339
Length = 339
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 72/81 (88%)
Query: 88 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 147
YIH+RARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSL
Sbjct: 169 YIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSL 228
Query: 148 QHQVEFLSMKLEAVNSRFNMN 168
Q Q+EFLSMKL AVN + N
Sbjct: 229 QCQIEFLSMKLSAVNPVLDFN 249
>AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=390
Length = 390
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 72/81 (88%)
Query: 88 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 147
YIH+RARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSL
Sbjct: 220 YIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSL 279
Query: 148 QHQVEFLSMKLEAVNSRFNMN 168
Q Q+EFLSMKL AVN + N
Sbjct: 280 QCQIEFLSMKLSAVNPVLDFN 300
>AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=390
Length = 390
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 72/81 (88%)
Query: 88 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 147
YIH+RARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSL
Sbjct: 220 YIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSL 279
Query: 148 QHQVEFLSMKLEAVNSRFNMN 168
Q Q+EFLSMKL AVN + N
Sbjct: 280 QCQIEFLSMKLSAVNPVLDFN 300
>AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 |
chr4:17243699-17244965 FORWARD LENGTH=302
Length = 302
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 73/87 (83%), Gaps = 6/87 (6%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+QS
Sbjct: 137 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 196
Query: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDC 173
LQ QVEFLSMKL + NP ++C
Sbjct: 197 LQQQVEFLSMKLSVI------NPELEC 217
>AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 |
chr4:17243699-17244965 FORWARD LENGTH=304
Length = 304
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 73/87 (83%), Gaps = 6/87 (6%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+QS
Sbjct: 137 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 196
Query: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDC 173
LQ QVEFLSMKL + NP ++C
Sbjct: 197 LQQQVEFLSMKLSVI------NPELEC 217
>AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=379
Length = 379
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 72/81 (88%)
Query: 88 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 147
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++QSL
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 148 QHQVEFLSMKLEAVNSRFNMN 168
Q QVE LSM+L AVN R + N
Sbjct: 261 QRQVEMLSMRLAAVNPRIDFN 281
>AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7953022-7954446 REVERSE
LENGTH=335
Length = 335
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 69/81 (85%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q
Sbjct: 181 DYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQC 240
Query: 147 LQHQVEFLSMKLEAVNSRFNM 167
LQ QVEFLSMKL +N +
Sbjct: 241 LQRQVEFLSMKLAVLNPELEL 261
>AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7953022-7954446 REVERSE
LENGTH=337
Length = 337
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 69/81 (85%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q
Sbjct: 181 DYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQC 240
Query: 147 LQHQVEFLSMKLEAVNSRFNM 167
LQ QVEFLSMKL +N +
Sbjct: 241 LQRQVEFLSMKLAVLNPELEL 261
>AT2G18300.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7952546-7954446 REVERSE
LENGTH=364
Length = 364
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 69/81 (85%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
DYIHVRARRGQATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q
Sbjct: 181 DYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQC 240
Query: 147 LQHQVEFLSMKLEAVNSRFNM 167
LQ QVEFLSMKL +N +
Sbjct: 241 LQRQVEFLSMKLAVLNPELEL 261
>AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17621542-17624635 FORWARD
LENGTH=327
Length = 327
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 72/81 (88%)
Query: 88 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 147
Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++Q+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTL 241
Query: 148 QHQVEFLSMKLEAVNSRFNMN 168
Q QVE LSM+L AVN R + N
Sbjct: 242 QRQVEMLSMRLAAVNPRIDFN 262
>AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 |
chr1:6331464-6333576 FORWARD LENGTH=260
Length = 260
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 71/88 (80%)
Query: 89 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 148
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 149 HQVEFLSMKLEAVNSRFNMNPTIDCFSS 176
+QVEFLSMKL A +S ++ N D S
Sbjct: 203 NQVEFLSMKLTAASSFYDFNSETDAVDS 230
>AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 |
chr1:27760027-27761346 FORWARD LENGTH=261
Length = 261
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 70/87 (80%)
Query: 90 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQH 149
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ+
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 150 QVEFLSMKLEAVNSRFNMNPTIDCFSS 176
QVEFLSMKL A +S ++ N D S
Sbjct: 206 QVEFLSMKLTAASSYYDFNSETDAVES 232
>AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 |
chr1:27760027-27761346 FORWARD LENGTH=260
Length = 260
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 70/87 (80%)
Query: 90 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQH 149
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ+
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 150 QVEFLSMKLEAVNSRFNMNPTIDCFSS 176
QVEFLSMKL A +S ++ N D S
Sbjct: 206 QVEFLSMKLTAASSYYDFNSETDAVES 232
>AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:8880515-8882018 REVERSE
LENGTH=223
Length = 223
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 72/82 (87%)
Query: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
D +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G A++LD II+Y++S
Sbjct: 100 DVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRS 159
Query: 147 LQHQVEFLSMKLEAVNSRFNMN 168
LQ+Q+EFLSMKL A ++ +++N
Sbjct: 160 LQNQIEFLSMKLSAASACYDLN 181
>AT3G57800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=426
Length = 426
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 72/128 (56%), Gaps = 47/128 (36%)
Query: 88 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK------------------ 129
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHL 260
Query: 130 -----------------------------VIGKALVLDEIINYIQSLQHQVEFLSMKLEA 160
+ G ALVLDEIIN++QSLQ QVE LSM+L A
Sbjct: 261 LMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAA 320
Query: 161 VNSRFNMN 168
VN R + N
Sbjct: 321 VNPRIDFN 328
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQ 188
Query: 151 VEFLSM 156
V+ LSM
Sbjct: 189 VKVLSM 194
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
+RARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 138 IRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDYVKFLQLQ 196
Query: 151 VEFLSM 156
V+ LSM
Sbjct: 197 VKVLSM 202
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 90 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQH 149
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQL 156
Query: 150 QVEFLSM 156
QV+ LSM
Sbjct: 157 QVKVLSM 163
>AT2G42300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17621542-17623469 FORWARD
LENGTH=233
Length = 233
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 42/43 (97%)
Query: 88 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 130
Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+KV
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEF 153
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 268
Query: 154 LSM 156
+SM
Sbjct: 269 MSM 271
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEF 153
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 339
Query: 154 LSM 156
+SM
Sbjct: 340 MSM 342
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEF 153
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 339
Query: 154 LSM 156
+SM
Sbjct: 340 MSM 342
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 93 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 153 FLSM 156
+SM
Sbjct: 398 IMSM 401
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 93 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 153 FLSM 156
+SM
Sbjct: 398 IMSM 401
>AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:18943802-18945613 REVERSE
LENGTH=379
Length = 379
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
+RA+RG AT S+AER RR KISERM+ LQDLVP + A +LD + YI+ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 151 VEFL 154
V+ L
Sbjct: 364 VKAL 367
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE- 152
+R + + H+LAER RREKI+E+MK LQ L+P CNK K LD+ I Y++SLQ Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQG 310
Query: 153 FLSMKLEAVNSR 164
+S + A N++
Sbjct: 311 MMSPMMNAGNTQ 322
>AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14228719-14230288 FORWARD
LENGTH=307
Length = 307
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQV 151
+R +A + H+LAER RREKI+ERMK LQ L+P CNK K +L+++I Y++SL+ Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQI 203
>AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17611428-17613163 REVERSE
LENGTH=359
Length = 359
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 151 VEFLS 155
+ L+
Sbjct: 339 YKILN 343
>AT2G43140.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17931680-17935639 REVERSE
LENGTH=309
Length = 309
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
RA+RG AT S+AER RR +IS ++K LQ+LVP +K A +LD + +I+ LQHQ
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
Query: 151 VEFLSMKLE 159
VE L +E
Sbjct: 291 VESLEKGME 299
>AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-like
1 | chr2:19295617-19297678 REVERSE LENGTH=416
Length = 416
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 89 IHVRAR-----RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 143
+H R R R ++T+ H L ER RR++ +++M+ LQDL+P C K KA +LDE I Y
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKY 274
Query: 144 IQSLQHQVEFLSM 156
+++LQ QV+ +SM
Sbjct: 275 MRTLQLQVQMMSM 287
>AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:13040092-13041907 FORWARD
LENGTH=259
Length = 259
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y+++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 151 VEFLS 155
++ L+
Sbjct: 241 IQELT 245
>AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:5847513-5849500 FORWARD
LENGTH=262
Length = 262
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 89 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 148
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 149 HQVEFLS 155
Q++ L+
Sbjct: 242 RQIQELT 248
>AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 204
Query: 151 VEFLSM 156
V+ LSM
Sbjct: 205 VKVLSM 210
>AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 204
Query: 151 VEFLSM 156
V+ LSM
Sbjct: 205 VKVLSM 210
>AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 |
chr4:16239566-16241052 REVERSE LENGTH=352
Length = 352
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 266 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 324
Query: 151 VEFLS 155
++ LS
Sbjct: 325 IKLLS 329
>AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140117
REVERSE LENGTH=247
Length = 247
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 83 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 141
Query: 151 VEFLSM 156
V+ LSM
Sbjct: 142 VKVLSM 147
>AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=297
Length = 297
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 197
Query: 151 VEFLSM 156
V+ LSM
Sbjct: 198 VKVLSM 203
>AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=302
Length = 302
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 202
Query: 151 VEFLSM 156
V+ LSM
Sbjct: 203 VKVLSM 208
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 93 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
++R +A H L+ER RR+KI+E MK LQ+L+P C K ++ +LD++I Y++SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQ 331
Query: 153 FLSM 156
SM
Sbjct: 332 MFSM 335
>AT1G05805.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1744843-1747427 FORWARD
LENGTH=362
Length = 362
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQHQ
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 151 VEFLSMKLE 159
++ L E
Sbjct: 343 LQNLKKDQE 351
>AT2G43140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17932376-17935639 REVERSE
LENGTH=297
Length = 297
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
RA+RG AT S+AER RR +IS ++K LQ+LVP +K A +LD + +I+ LQHQ
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 151 VE 152
VE
Sbjct: 293 VE 294
>AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 |
chr1:9654753-9655806 FORWARD LENGTH=258
Length = 258
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225
Query: 151 VEFLS 155
++ LS
Sbjct: 226 IKLLS 230
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265
Query: 151 VEFLS 155
V +S
Sbjct: 266 VSMMS 270
>AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=328
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 151 VEFLS 155
++ LS
Sbjct: 296 IKLLS 300
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 97 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSM 156
+A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 157 K 157
+
Sbjct: 256 R 256
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 93 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
++R +A H L+ER RR+KI+E MK LQ+L+P C K ++ +LD++I Y++SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQ 331
Query: 153 FLSMKL 158
+++
Sbjct: 332 GKHLRI 337
>AT3G59060.1 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=442
Length = 442
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 93 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 153 FLSM 156
+ M
Sbjct: 311 VMWM 314
>AT3G59060.4 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 93 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 153 FLSM 156
+ M
Sbjct: 311 VMWM 314
>AT3G59060.3 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 93 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 153 FLSM 156
+ M
Sbjct: 311 VMWM 314
>AT3G59060.2 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 93 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 153 FLSM 156
+ M
Sbjct: 311 VMWM 314
>AT2G43010.1 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting
factor 4 | chr2:17887003-17888823 FORWARD LENGTH=430
Length = 430
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEF 153
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 312
Query: 154 L 154
+
Sbjct: 313 M 313
>AT2G43010.2 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting
factor 4 | chr2:17887003-17888823 FORWARD LENGTH=428
Length = 428
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEF 153
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 312
Query: 154 L 154
+
Sbjct: 313 M 313
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 98 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQV---EFL 154
+TD ++A R RRE+ISE++++LQ LVPG K + A +LDE NY++ L+ QV E L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 334
Query: 155 SMKLEAVNSRFNMNPT 170
KL+ N F+ PT
Sbjct: 335 RPKLDQTNLSFSSAPT 350
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Query: 102 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLEAV 161
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L AV
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTL-----AV 151
Query: 162 NSRFNMNP 169
+ +NP
Sbjct: 152 MNGLGLNP 159
>AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:17334261-17335234 FORWARD
LENGTH=223
Length = 223
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
+A RG A+D SL R RRE+I++R+K LQ LVP KV + +L++ ++Y++ LQ Q
Sbjct: 132 AKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKV-DISTMLEDAVHYVKFLQLQ 190
Query: 151 VEFLS 155
++ LS
Sbjct: 191 IKLLS 195
>AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 |
chr1:24795326-24796598 FORWARD LENGTH=298
Length = 298
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 100 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLS 155
D SLA + RRE+ISER+KILQ+LVP KV +L++ I+Y++ LQ QV+ L+
Sbjct: 204 DPQSLAAKNRRERISERLKILQELVPNGTKV-DLVTMLEKAISYVKFLQVQVKVLA 258
>AT2G14760.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=341
Length = 341
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 14/78 (17%)
Query: 91 VRARRGQATDSHSLAER-------------ARREKISERMKILQDLVPGCNKVIGKALVL 137
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L
Sbjct: 237 TRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKV-DISTML 295
Query: 138 DEIINYIQSLQHQVEFLS 155
+E + Y++ LQ Q++ LS
Sbjct: 296 EEAVQYVKFLQLQIKLLS 313
>AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 |
chr5:15036197-15037574 FORWARD LENGTH=307
Length = 307
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 100 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLS 155
D SLA + RRE+ISER+K+LQ+LVP KV +L++ I Y++ LQ QV+ L+
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKV-DLVTMLEKAIGYVKFLQVQVKVLA 264
>AT5G61270.2 | Symbols: PIF7 | phytochrome-interacting factor7 |
chr5:24638873-24640031 REVERSE LENGTH=278
Length = 278
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEF 153
RRG+A H+ +ER RR++I++RM+ LQ L+P +K K +LD++I +++ LQ QV+F
Sbjct: 75 RRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKA-DKVSILDDVIEHLKQLQAQVQF 133
Query: 154 LSMK 157
+S++
Sbjct: 134 MSLR 137
>AT5G61270.1 | Symbols: PIF7 | phytochrome-interacting factor7 |
chr5:24638873-24640439 REVERSE LENGTH=366
Length = 366
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEF 153
RRG+A H+ +ER RR++I++RM+ LQ L+P +K K +LD++I +++ LQ QV+F
Sbjct: 163 RRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKA-DKVSILDDVIEHLKQLQAQVQF 221
Query: 154 LSMK 157
+S++
Sbjct: 222 MSLR 225
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 97 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSM 156
+ T +H+L+E+ RREK++ER L+ ++P +K I K +LD+ I Y+Q LQ +V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISK-IDKVSILDDTIEYLQDLQKRVQELES 459
Query: 157 KLEAVNS 163
E+ ++
Sbjct: 460 CRESADT 466
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 97 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSM 156
+ T +H+L+E+ RREK++ER L+ ++P +K I K +LD+ I Y+Q LQ +V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISK-IDKVSILDDTIEYLQDLQKRVQELES 459
Query: 157 KLEAVNS 163
E+ ++
Sbjct: 460 CRESADT 466
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 97 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSM 156
+ T +H+L+E+ RREK++ER L+ ++P +K I K +LD+ I Y+Q LQ +V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISK-IDKVSILDDTIEYLQDLQKRVQELES 459
Query: 157 KLEAVNS 163
E+ ++
Sbjct: 460 CRESADT 466
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 99 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKL 158
T +H++ E+ RREK++ER L+ ++P NK I K +LD+ I Y+Q L+ +V+ L
Sbjct: 439 TGNHAVLEKKRREKLNERFMTLRKIIPSINK-IDKVSILDDTIEYLQELERRVQELESCR 497
Query: 159 EAVNS 163
E+ ++
Sbjct: 498 ESTDT 502
>AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-128960
FORWARD LENGTH=912
Length = 912
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 92 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQV 151
R+ +TD S+A R RR +IS+R KILQ +VPG K + +LDE I+Y++ L+ Q+
Sbjct: 38 RSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAK-MDTVSMLDEAISYVKFLKAQI 96
Query: 152 EFLSMKLEAVN 162
+ L +N
Sbjct: 97 WYHQNMLLFIN 107
>AT1G69010.1 | Symbols: BIM2 | BES1-interacting Myc-like protein 2 |
chr1:25941804-25943599 FORWARD LENGTH=311
Length = 311
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 102 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
HS+ E+ RR KI+ER +IL++L+P + A L E+I+Y+Q LQ +V+
Sbjct: 50 HSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100
>AT4G28811.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14225335-14227840 FORWARD
LENGTH=544
Length = 544
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEF 153
+R +A D H+L+ER RRE+I+ERMK LQ+L+P C K K +L+++I Y++SLQ Q++
Sbjct: 354 KRSRAADMHNLSERRRRERINERMKTLQELLPRCRKT-DKVSMLEDVIEYVKSLQLQIQM 412
Query: 154 LS 155
+S
Sbjct: 413 MS 414