Miyakogusa Predicted Gene

Lj4g3v1561710.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1561710.2 tr|A9S692|A9S692_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_75128
,34.69,1e-18,seg,NULL,CUFF.49416.2
         (351 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48120.1 | Symbols:  | unknown protein; Has 22990 Blast hits ...   179   2e-45

>AT3G48120.1 | Symbols:  | unknown protein; Has 22990 Blast hits to
           12942 proteins in 666 species: Archae - 8; Bacteria -
           739; Metazoa - 13803; Fungi - 2465; Plants - 1363;
           Viruses - 116; Other Eukaryotes - 4496 (source: NCBI
           BLink). | chr3:17772137-17774550 FORWARD LENGTH=328
          Length = 328

 Score =  179 bits (455), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 92/152 (60%), Positives = 115/152 (75%), Gaps = 6/152 (3%)

Query: 206 DYAKLIRGYDNMSAAERVKAKMKLQLSETAAKDSEKGAGWERFEFNKDAPLDDEEF-EVA 264
           DY++LI+GYD MSAAE+VKAKMKLQL ETA KD+ KGAGWERFEF+K+AP+DDEE  E A
Sbjct: 177 DYSRLIKGYDEMSAAEKVKAKMKLQLDETAEKDTSKGAGWERFEFDKEAPVDDEELEEGA 236

Query: 265 EDDGSLVKHIGQSFRFSAVEAKREERIQAAHEEAMFGASALPPPINTDSEPERE-----D 319
           +DD +LVK +GQS+RFSA+EAKREE+++AAH+EAMFG      P     +   E     D
Sbjct: 237 DDDAALVKRMGQSYRFSAIEAKREEQLKAAHDEAMFGVPTGQTPTENTGDDVTEITNVKD 296

Query: 320 EEADKKELVTSLLSETVLAKQKGSWRDRVRQA 351
           +E +      SLLSE VLAKQ+GSWRDR R++
Sbjct: 297 DEGESNSGAISLLSEKVLAKQQGSWRDRARKS 328



 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 35/38 (92%), Gaps = 1/38 (2%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAADVP 38
          MEEEKAAAYYDELTRKGEGAARFKQGLGFS+ A A VP
Sbjct: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSTGANA-VP 37